An overlooked mechanism underlying the attenuated temperature response of soil heterotrophic respiration
Biogeochemical reactions occurring in soil pore space underpin gaseous emissions measured at macroscopic scales but are difficult to quantify due to their complexity and heterogeneity. We develop a volumetric-average method to calculate aerobic respiration rates analytically from soil with microscopic soil structure represented explicitly. Soil water content in the model is the result of the volumetric-average of the microscopic processes, and it is nonlinearly coupled with temperature and other factors. Since many biogeochemical reactions are driven by oxygen (O2) which must overcome various resistances before reaching reactive microsites from the atmosphere, the volumetric-average results in negative feedback between temperature and soil respiration, with the magnitude of the feedback increasing with soil water content and substrate quality. Comparisons with various experiments show the model reproduces the variation of carbon dioxide emission from soils under different water content and temperature gradients, indicating that it captures the key microscopic processes underpinning soil respiration. We show that alongside thermal microbial adaptation, substrate heterogeneity and microbial turnover and carbon use efficiency, O2 dissolution and diffusion in water associated with soil pore space is another key explanation for the attenuated temperature response of soil respiration and should be considered in developing soil organic carbon models.
| Item Type | Article |
|---|---|
| Open Access | Gold |
| Additional information | Natural Environmental Research Council of the UK (grant no. NE/T010487/1) USDA/NIFA (grant no. 2019-67022-30512) National Science Foundation (grant no. CMMI-1935551) under the Signals in the Soil collaborative programme. Soil to Nutrition strategic programme (grant no. BBS/E/C/000I0301) funded by the Biotechnology and Biological Sciences Research Council (BBSRC) of the UK |
| Keywords | Soil respiration, Oxygen dissolution and diffusion, Temperature response of soil respiration, Microscopic soil structure |
| Project | S2N - Soil to Nutrition - Work package 1 (WP1) - Optimising nutrient flows and pools in the soil-plant-biota system |
| Date Deposited | 05 Dec 2025 10:34 |
| Last Modified | 21 Jan 2026 17:23 |
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description - RY-Interface_r2.docx
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subject - Accepted Version
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- Available under Creative Commons: Attribution 4.0

