Genstat 3[1] Procedure Library

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1994. Genstat 3[1] Procedure Library. Numerical Algorithms Group, Oxford.

Related outputs

Electrophysiologically and behaviourally active semiochemicals identified from bed bug refuge substrate

A - Papers appearing in refereed journals

Birkett, M. A., Weeks, E. N. I., Logan, J. G., Caulfield, J. C., Gazan, S. A., Welham, S. J., Brugman, V. A., Pickett, J. A. and Cameron, M. M. 2020. Electrophysiologically and behaviourally active semiochemicals identified from bed bug refuge substrate. Scientific Reports. (10), p. article 4590. https://doi.org/10.1038/s41598-020-61368-6

Journal of animal breeding and genetics

A - Papers appearing in refereed journals

Thompson, R. 2019. Journal of animal breeding and genetics . 136 (4), pp. 229-309.

Desert island papers-a life in variance parameter and quantitative genetic parameter estimation reviewed using sixteen papers

A - Papers appearing in refereed journals

Thompson, R. 2019. Desert island papers-a life in variance parameter and quantitative genetic parameter estimation reviewed using sixteen papers. Journal of Animal Breeding and Genetics. 136 (4), pp. 230-242. https://doi.org/10.1111/jbg.12400

Estimating the variance for heterogeneity in arm-based network meta-analysis

A - Papers appearing in refereed journals

Piepho, H.-P., Madden, L. V., Roger, J., Payne, R. W. and Williams, E. R. 2018. Estimating the variance for heterogeneity in arm-based network meta-analysis. Pharmaceutical Statistics. 17 (3), pp. 264-277. https://doi.org/10.1002/pst.1857

Meteorological and landscape influences on pollen beetle immigration into oilseed rape crops

A - Papers appearing in refereed journals

Skellern, M., Welham, S. J., Watts, N. P. and Cook, S. M. 2017. Meteorological and landscape influences on pollen beetle immigration into oilseed rape crops. Agriculture, Ecosystems & Environment. 241 (1 April), pp. 150-159. https://doi.org/10.1016/j.agee.2017.03.008

Genomic Selection in Multi-environment Crop Trials

A - Papers appearing in refereed journals

Oakey, H., Cullis, B. R., Thompson, R., Comadran, J., Halpin, C. and Waugh, R. 2016. Genomic Selection in Multi-environment Crop Trials. G3: Genes, Genomes, Genetics. 6 (5), pp. 1313-1326. https://doi.org/10.1534/g3.116.027524

Identification of environmentally stable QTL for resistance against Leptosphaeria maculans in oilseed rape (Brassica napus)

A - Papers appearing in refereed journals

Huang, Y. J., Jestin, C., Welham, S. J., King, G. J., Manzanares-Dauleux, M. J., Fitt, B. D. L. and Delourme, R. 2016. Identification of environmentally stable QTL for resistance against Leptosphaeria maculans in oilseed rape (Brassica napus). Theoretical and Applied Genetics. 129 (1), pp. 169-180. https://doi.org/10.1007/s00122-015-2620-z

Statistical methods in biology: design and analysis of experiments and regression

E - Books edited/written by staff member, alone/with others

Welham, S. J., Gezan, S. A., Clark, S. J. and Mead, A. 2015. Statistical methods in biology: design and analysis of experiments and regression. CRC Press, Boca Raton, Florida.

Genetical and comparative genomics of Brassica under altered Ca supply identifies Arabidopsis Ca-transporter orthologs

A - Papers appearing in refereed journals

Graham, N. S., Hammond, J. P., Lysenko, A., Mayes, S., O Lochlainn, S., Blasco, B., Bowen, H. C., Rawlings, C. J., Rios, J. J., Welham, S. J., Carion, P. W. C., Dupuy, L. X., King, G. J., White, P. J. and Broadley, M. R. 2014. Genetical and comparative genomics of Brassica under altered Ca supply identifies Arabidopsis Ca-transporter orthologs. The Plant Cell. 26, pp. 2818-2830. https://doi.org/10.1105/tpc.114.128603

Employing a Monte Carlo algorithm in Newton-type methods for restricted maximum likelihood estimation of genetic parameters

A - Papers appearing in refereed journals

Matilainen, K., Mantysaari, E. A., Lidauer, M. H., Stranden, I. and Thompson, R. 2013. Employing a Monte Carlo algorithm in Newton-type methods for restricted maximum likelihood estimation of genetic parameters. PLOS ONE. 8 (12), p. e80821. https://doi.org/10.1371/journal.pone.0080821

Hydroxamic acids in Aegilops species and effects on Rhopalosiphum padi behaviour and fecundity

A - Papers appearing in refereed journals

Elek, H., Smart, L. E., Martin, J. L., Ahmad, S., Gordon-Weeks, R., Anda, A., Welham, S. J., Werner, P. and Pickett, J. A. 2013. Hydroxamic acids in Aegilops species and effects on Rhopalosiphum padi behaviour and fecundity. Bulletin of Insectology. 66, pp. 213-220.

The design and analysis of long-term rotation experiments

A - Papers appearing in refereed journals

Payne, R. W. 2013. The design and analysis of long-term rotation experiments. Agronomy Journal. 105 (2), pp. 772-785. https://doi.org/10.2134/agronj2012.0411

A review of the effects of crop agronomy on the management of Alopecurus myosuroides

A - Papers appearing in refereed journals

Lutman, P. J. W., Moss, S. R., Cook, S. and Welham, S. J. 2013. A review of the effects of crop agronomy on the management of Alopecurus myosuroides. Weed Research. 53 (5), pp. 299-313. https://doi.org/10.1111/wre.12024

A bivariate mixed model approach for the analysis of plant survival data

A - Papers appearing in refereed journals

Ganesalingam, A., Smith, A. B., Beeck, C. P., Cowling, W. A., Thompson, R. and Cullis, B. R. 2013. A bivariate mixed model approach for the analysis of plant survival data. Euphytica. 190 (3), pp. 371-383. https://doi.org/10.1007/s10681-012-0791-0

The potential of hydroxamic acids in tetraploid and hexaploid wheat varieties as resistance factors against the bird-cherry oat aphid, Rhopalosiphum padi

A - Papers appearing in refereed journals

Elek, H., Smart, L. E., Martin, J. L., Ahmad, S., Gordon-Weeks, R., Welham, S. J., Nadasy, M., Pickett, J. A. and Werner, C. P. 2013. The potential of hydroxamic acids in tetraploid and hexaploid wheat varieties as resistance factors against the bird-cherry oat aphid, Rhopalosiphum padi. Annals of Applied Biology - AAB. 162 (1), pp. 100-109. https://doi.org/10.1111/aab.12005

Development of an integrated pest management strategy for control of pollen beetles in winter oilseed rape (HGCA Project Report No 504)

D1 - Technical reports: non-confidential

Cook, S. M., Doring, T. F., Ferguson, A. W., Martin, J. L., Skellern, M. P., Smart, L. E., Watts, N. P., Welham, S. J., Woodcock, C. M., Pickett, J. A., Bardsley, E., Bowman, J., Burns, S., Clarke, M., Davies, J., Gibbard, C., Johnen, A., Jennaway, R., Meredith, R., Murray, D., Nightingale, M., Padbury, N., Patrick, C., Von Richthofen, J-S., Taylor, P., Tait, M. and Werner, P. 2013. Development of an integrated pest management strategy for control of pollen beetles in winter oilseed rape (HGCA Project Report No 504). Kenilworth Home Grown Cereals Authority (HGCA).

Employing a Monte Carlo algorithm in expectation maximization restricted maximum likelihood estimation of the linear mixed model

A - Papers appearing in refereed journals

Matilainen, K., Mantysaari, E. A., Lidauer, M. H., Stranden, L. and Thompson, R. 2012. Employing a Monte Carlo algorithm in expectation maximization restricted maximum likelihood estimation of the linear mixed model. Journal of Animal Breeding and Genetics. 129 (6), pp. 457-468. https://doi.org/10.1111/j.1439-0388.2012.01000.x

Estimating variance components and predicting breeding values for eventing disciplines and grades in sport horses

A - Papers appearing in refereed journals

Stewart, I. D., White, I. M. S., Gilmour, A. R., Thompson, R., Woolliams, J. A. and Brotherstone, S. 2012. Estimating variance components and predicting breeding values for eventing disciplines and grades in sport horses. Animal. 6 (9), pp. 1377-1388. https://doi.org/10.1017/S1751731112000596

A hypomethylated population of Brassica rapa for forward and reverse epi-genetics

A - Papers appearing in refereed journals

Amoah, S., Kurup, S., Rodriguez Lopez, C. M., Welham, S. J., Powers, S. J., Hopkins, C. J., Wilkinson, M. J. and King, G. J. 2012. A hypomethylated population of Brassica rapa for forward and reverse epi-genetics. BMC Plant Biology. 12, p. 193 (17pp). https://doi.org/10.1186/1471-2229-12-193

Three-point appraisal of genetic linkage maps

A - Papers appearing in refereed journals

Gilks, W. R., Welham, S. J., Wang, J., Clark, S. J. and King, G. J. 2012. Three-point appraisal of genetic linkage maps. Theoretical and Applied Genetics. 125, pp. 1393-1402. https://doi.org/10.1007/s00122-012-1920-9

The trait and host plant ecology of aphids and their distribution and abundance in the United Kingdom

A - Papers appearing in refereed journals

Bell, J. R., Taylor, M. S., Shortall, C. R., Welham, S. J. and Harrington, R. 2012. The trait and host plant ecology of aphids and their distribution and abundance in the United Kingdom. Global Ecology and Biogeography. 21 (4), pp. 405-415. https://doi.org/10.1111/j.1466-8238.2011.00685.x

Fitness trade-off in peach-potato aphids (Myzus persicae) between insecticide resistance and vulnerability to parasitoid attack at several spatial scales

A - Papers appearing in refereed journals

Foster, S. P., Denholm, I., Poppy, G. M., Thompson, R. and Powell, W. 2011. Fitness trade-off in peach-potato aphids (Myzus persicae) between insecticide resistance and vulnerability to parasitoid attack at several spatial scales. Bulletin of Entomological Research. 101 (6), pp. 659-666. https://doi.org/10.1017/S0007485310000623

Genomic and pedigree-based genetic parameters for scarcely recorded traits when some animals are genotyped

A - Papers appearing in refereed journals

Veerkamp, R. F., Mulder, H. A., Thompson, R. and Calus, M. P. L. 2011. Genomic and pedigree-based genetic parameters for scarcely recorded traits when some animals are genotyped. Journal of Dairy Science. 94 (8), pp. 4189-4197. https://doi.org/10.3168/jds.2011-4223

Joint modeling of spatial variability and within-row interplot competition to increase the efficiency of plant improvement

A - Papers appearing in refereed journals

Stringer, J. K., Cullis, B. R. and Thompson, R. 2011. Joint modeling of spatial variability and within-row interplot competition to increase the efficiency of plant improvement. Journal of Agricultural Biological and Environmental Statistics. 16 (2), pp. 269-281. https://doi.org/10.1007/s13253-010-0051-5

Regulatory hotspots are associated with plant gene expression under varying soil phosphorus supply in Brassica rapa

A - Papers appearing in refereed journals

Hammond, J. P., Mayes, S., Bowen, H. C., Graham, N. S., Hayden, R. M., Love, C. G., Spracklen, W. P., Wang, J., Welham, S. J., White, P. J., King, G. J. and Broadley, M. R. 2011. Regulatory hotspots are associated with plant gene expression under varying soil phosphorus supply in Brassica rapa. Plant Physiology. 156, pp. 1230-1241. https://doi.org/10.1104/pp.111.175612

The design and analysis of variety trials using mixtures of composite and individual plot samples

A - Papers appearing in refereed journals

Smith, A. B., Thompson, R., Butler, D. G. and Cullis, B. R. 2011. The design and analysis of variety trials using mixtures of composite and individual plot samples. Journal of the Royal Statistical Society, Series C (Applied Statistics). 60 (3), pp. 437-455. https://doi.org/10.1111/j.1467-9876.2010.00755.x

Maternal risk factors in Afghan-refugees compared to Pakistani mothers in Peshawar, NWFP Pakistan

A - Papers appearing in refereed journals

Badshah, S., Mason, L., Mckelvie, K., Payne, R. W. and Lisboa, P. J. G. 2011. Maternal risk factors in Afghan-refugees compared to Pakistani mothers in Peshawar, NWFP Pakistan. Journal Of The Pakistan Medical Association. 61, pp. 161-164.

Effects of environment on stability of QTL for resistance to Leptosphaeria maculans on oilseed rape (Brassica napus)

C2 - Non-edited contributions to conferences

Huang, Y-J., Jestin, C., Welham, S. J., King, G. J., Fitt, B. D. L. and Delourme, R. 2010. Effects of environment on stability of QTL for resistance to Leptosphaeria maculans on oilseed rape (Brassica napus). Abstracts 17th Crucifer Genetics Workshop, Saskatoon, 5-8 September 2010 . pp. 124

Estimation of spatial trend and automatic model selection in augmented designs

A - Papers appearing in refereed journals

Kehel, Z., Habash, D. Z., Gezan, S. A., Welham, S. J. and Nachit, M. M. 2010. Estimation of spatial trend and automatic model selection in augmented designs. Agronomy Journal. 102, pp. 1542-1552. https://doi.org/10.2134/agronj2010.0175

Spectral tempering to model non-stationary covariance of nitrous oxide emissions from soil using continuous or categorical explanatory variables at a landscape scale

A - Papers appearing in refereed journals

Haskard, K. A., Welham, S. J. and Lark, R. M. 2010. Spectral tempering to model non-stationary covariance of nitrous oxide emissions from soil using continuous or categorical explanatory variables at a landscape scale. Geoderma. 159, pp. 358-370. https://doi.org/10.1016/j.geoderma.2010.08.012

Some consequences of using the Horsfall-Barratt scale for hypothesis testing

A - Papers appearing in refereed journals

Bock, C. H., Gottwald, T. R., Parker, P. E., Ferrandino, F., Welham, S. J., Van Den Bosch, F. and Parnell, S. 2010. Some consequences of using the Horsfall-Barratt scale for hypothesis testing. Phytopathology. 100 (10), pp. 1030-1041. https://doi.org/10.1094/PHYTO-08-09-0220

A comparison of analysis methods for late-stage variety evaluation trials

A - Papers appearing in refereed journals

Welham, S. J., Gogel, B. J., Smith, A. B., Thompson, R. and Cullis, B. R. 2010. A comparison of analysis methods for late-stage variety evaluation trials. Australian & New Zealand Journal of Statistics. 52 (2), pp. 125-149. https://doi.org/10.1111/j.1467-842X.2010.00570.x

To bite or not to bite! A questionnaire-based survey assessing why some people are bitten more than others by midges

A - Papers appearing in refereed journals

Logan, J. G., Cook, J. I., Stanczyk, N. M., Weeks, E. N. I., Welham, S. J. and Mordue (Luntz), A. J. 2010. To bite or not to bite! A questionnaire-based survey assessing why some people are bitten more than others by midges. BMC Public Health. 10, p. 275 (8pp). https://doi.org/10.1186/1471-2458-10-275

A variance shift model for detection of outliers in the linear mixed model

A - Papers appearing in refereed journals

Gumedze, F. N., Welham, S. J., Gogel, B. J. and Thompson, R. 2010. A variance shift model for detection of outliers in the linear mixed model. Computational Statistics & Data Analysis. 54 (9), pp. 2128-2144. https://doi.org/10.1016/j.csda.2010.03.019

The identification of a virulence factor-enriched micro-region in the Fusarium graminearum genome

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Antoniw, J. F., Freeman, A., Urban, M., Welham, S. J. and Beacham, A. 2010. The identification of a virulence factor-enriched micro-region in the Fusarium graminearum genome. Abstracts Fusarium Workshop, Amsterdam, 28-29 March 2010 .

Long-term Fertilizer Experiment Network in China: crop yields and soil nutrient trends

A - Papers appearing in refereed journals

Zhao, B-Q., Li, X-Y., Li, X-P., Shi, X-J., Huang, S-M., Wang, B-R., Zhu, P., Yang, X-Y., Liu, H., Chen, Y., Poulton, P. R., Powlson, D. S., Todd, A. D. and Payne, R. W. 2010. Long-term Fertilizer Experiment Network in China: crop yields and soil nutrient trends. Agronomy Journal. 102, pp. 216-230. https://doi.org/10.2134/agronj2009.0182

ASREML user guide release 3.0

D1 - Technical reports: non-confidential

Gilmour, A. R., Gogel, B. J., Cullis, B. R. and Thompson, R. 2009. ASREML user guide release 3.0. VSN International, Hemel Hempstead.

The GAMes aphids play

C2 - Non-edited contributions to conferences

Bell, J. R., Harrington, R., Welham, S. J., Clark, S. J. and Pickup, J. 2009. The GAMes aphids play. Abstracts 8th International Symposium on Aphids, Catania, 8-12 June 2009 .

Latent mixed models

C2 - Non-edited contributions to conferences

Thompson, R. 2009. Latent mixed models. Proceedings 18th Conference of the Association for the Advancement of Animal Breeding and Genetics: Matching Genetics and the Environment - a New Look at an Old Topic, Barossa Valley, 28 September - 1 October 2009 . Association for the Advancement of Animal Breeding Genetics. pp. 398-405

Some consequences of using the Horsfall-Barratt scale for estimating disease severity compared to nearest percent estimation

C2 - Non-edited contributions to conferences

Bock, C. H., Gottwald, T. R., Parker, P. E., Ferrandino, F., Welham, S. J., Van Den Bosch, F. and Parnell, S. R. 2009. Some consequences of using the Horsfall-Barratt scale for estimating disease severity compared to nearest percent estimation. Abstracts 10th International Epidemiological Workshop, Geneva, New York, 8-12 June 2009 .

A novel transcriptomic approach to identify candidate genes for grain quality traits in wheat

A - Papers appearing in refereed journals

Wan, Y., Toscano-Underwood, C., Toole, G., Skeggs, P., Zhu, T., Leverington, M., Griffiths, S., Wheeler, T., Gooding, M., Poole, R., Edwards, K. J., Gezan, S. A., Welham, S. J., Snape, J., Mills, E. N. C., Mitchell, R. A. C. and Shewry, P. R. 2009. A novel transcriptomic approach to identify candidate genes for grain quality traits in wheat. Plant Biotechnology Journal. 7 (5), pp. 401-410. https://doi.org/10.1111/j.1467-7652.2009.00405.x

A note on bimodality in the log-likelihood function for penalized spline mixed models

A - Papers appearing in refereed journals

Welham, S. J. and Thompson, R. 2009. A note on bimodality in the log-likelihood function for penalized spline mixed models. Computational Statistics & Data Analysis. 53 (4), pp. 920-931. https://doi.org/10.1016/j.csda.2008.10.031

Controlling for competition in neighbouring field plots in a willow (Salix spp.) trial

A - Papers appearing in refereed journals

Gezan, S. A., Macalpine, W. J., Shield, I. F. and Welham, S. J. 2008. Controlling for competition in neighbouring field plots in a willow (Salix spp.) trial. Aspects of Applied Biology. 90, pp. 181-187.

Improving wheat for nutrition and processing

C1 - Edited contributions to conferences/learned societies

Shewry, P. R., Wan, Y., Wheeler, T., Gooding, M., Poole, R., Edwards, K. J., Mills, E. N. C., Skeggs, P., Gezan, S., Welham, S. J., Shenton, C., Zhu, T., Phillips, A. L., Jones, H. D., Li, L., Ward, J. L., Freeman, J., Nemeth, C. and Mitchell, R. A. C. 2008. Improving wheat for nutrition and processing. Molinacano, J. L. (ed.) Cereal Science and Technology for Feeding Ten Billion People: Genomics Era and Beyond. Proceedings of the Meeting of the Eucarpia Cereal Section, Lleida (Spain), 13-17 November 2006 . Options Mediterraneennes, Series A, No 81. pp. 249-252

Weed control in conventional and herbicide tolerant winter oilseed rape (Brassica napus) grown in rotations with winter cereals in the UK

A - Papers appearing in refereed journals

Lutman, P. J. W., Sweet, J., Berry, K., Law, J., Payne, R. W., Simpson, E., Walker, K. and Wightman, P. 2008. Weed control in conventional and herbicide tolerant winter oilseed rape (Brassica napus) grown in rotations with winter cereals in the UK. Weed Research. 48 (5), pp. 408-419. https://doi.org/10.1111/j.1365-3180.2008.00643.x

Transcriptome analysis of grain development in hexaploid wheat

A - Papers appearing in refereed journals

Wan, Y., Poole, R. L., Huttly, A. K., Toscano-Underwood, C., Feeney, K., Welham, S. J., Gooding, M. J., Mills, C., Edwards, K. J., Shewry, P. R. and Mitchell, R. A. C. 2008. Transcriptome analysis of grain development in hexaploid wheat. BMC Genomics. 9, p. 121 (16pp). https://doi.org/10.1186/1471-2164-9-121

The analysis of QTL by simultaneous use of the full linkage map

A - Papers appearing in refereed journals

Verbyla, A. P., Cullis, B. R. and Thompson, R. 2008. The analysis of QTL by simultaneous use of the full linkage map. Theoretical and Applied Genetics. 116 (December), pp. 95-111. https://doi.org/10.1007/s00122-007-0650-x

Estimation of quantitative genetic parameters

A - Papers appearing in refereed journals

Thompson, R. 2008. Estimation of quantitative genetic parameters. Proceedings of the Royal Society B: Biological Sciences. 275, pp. 679-686. https://doi.org/10.1098/rspb.2007.1417

Analysis of litter size and average litter weight in pigs using a recursive model

A - Papers appearing in refereed journals

Varona, L., Sorensen, D. and Thompson, R. 2007. Analysis of litter size and average litter weight in pigs using a recursive model. Genetics. 177 (3), pp. 1791-1799. https://doi.org/10.1534/genetics.107.077818

Behavioural side-effects of insecticide resistance in aphids increase their vulnerability to parasitoid attack

A - Papers appearing in refereed journals

Foster, S. P., Tomiczek, M., Thompson, R., Denholm, I., Poppy, G. M., Kraaijeveld, A. R. and Powell, W. 2007. Behavioural side-effects of insecticide resistance in aphids increase their vulnerability to parasitoid attack. Animal Behaviour. 74 (3), pp. 621-632. https://doi.org/10.1016/j.anbehav.2006.12.018

Quasi-Monte Carlo estimation in generalized linear mixed models

A - Papers appearing in refereed journals

Pan, J. and Thompson, R. 2007. Quasi-Monte Carlo estimation in generalized linear mixed models. Computational Statistics & Data Analysis. 51 (12), pp. 5765-5775. https://doi.org/10.1016/j.csda.2006.10.003

Transcriptome profiling of wheat genotypes differing in bread making quality under different environments

C2 - Non-edited contributions to conferences

Wan, Y., Mitchell, R. A. C., Leverington, M., Griffiths, S., Snape, J., Wheeler, T., Gooding, M., Poole, R., Edwards, K., Mills, C., Skeggs, P., Gezan, S., Welham, S. J., Shenton, C., Zhu, T. and Shewry, P. R. 2007. Transcriptome profiling of wheat genotypes differing in bread making quality under different environments. Abstracts 4th UK Small Grain Cereals Genetic and Genomics Workshop: From Genes to Traits, Cambridge, 14-16 March 2007 .

Environmental change and the phenology of European aphids

A - Papers appearing in refereed journals

Harrington, R., Clark, S. J., Welham, S. J., Verrier, P. J., Denholm, C. H., Hulle, M., Maurice, D., Rounsevell, M. D., Cocu, N. and European Union Examine Consortium 2007. Environmental change and the phenology of European aphids. Global Change Biology. 13 (8), pp. 1550-1564. https://doi.org/10.1111/j.1365-2486.2007.01394.x

Drought effects on yield and its components in Indian mustard (Brassica juncea L.)

A - Papers appearing in refereed journals

Chauhan, J. S., Tyagi, M. K., Kumar, A., Nashaat, N. I., Singh, M., Singh, N. B., Jakhar, M. L. and Welham, S. J. 2007. Drought effects on yield and its components in Indian mustard (Brassica juncea L.). Plant Breeding. 126 (4), pp. 399-402. https://doi.org/10.1111/j.1439-0523.2007.01394.x

A comparison of mixed model splines for curve fitting

A - Papers appearing in refereed journals

Welham, S. J., Cullis, B. R., Kenward, M. G. and Thompson, R. 2007. A comparison of mixed model splines for curve fitting. Australian & New Zealand Journal of Statistics. 49 (1), pp. 1-23. https://doi.org/10.1111/j.1467-842X.2006.00454.x

Multivariate spatial statistical analysis of longitudinal data in perennial crops

A - Papers appearing in refereed journals

De Resende, M. D. V., Thompson, R. and Welham, S. J. 2006. Multivariate spatial statistical analysis of longitudinal data in perennial crops. Revista de Matemática e Estatística, São Paulo,. 24 (1), pp. 147-169.

New and traditional methods for the analysis of unreplicated experiments

A - Papers appearing in refereed journals

Payne, R. W. 2006. New and traditional methods for the analysis of unreplicated experiments. Crop Science. 46, pp. 2476-2481. https://doi.org/10.2135/cropsci2006.04.0273

Development and uptake of a scheme for predicting risk of severe light leaf spot on oilseed rape

G - Articles in popular magazines and other technical publications

Evans, N., Welham, S. J., Antoniw, J. F. and Fitt, B. D. L. 2006. Development and uptake of a scheme for predicting risk of severe light leaf spot on oilseed rape. Outlooks on Pest Management. 17 (6), pp. 243-245. https://doi.org/10.1564/17dec02

On spatial prediction of soil properties in the presence of a spatial trend: the empirical best linear unbiased predictor (E-BLUP) with REML

A - Papers appearing in refereed journals

Lark, R. M., Cullis, B. R. and Welham, S. J. 2006. On spatial prediction of soil properties in the presence of a spatial trend: the empirical best linear unbiased predictor (E-BLUP) with REML. European Journal of Soil Science. 57 (6), pp. 787-799. https://doi.org/10.1111/j.1365-2389.2005.00768.x

Pasture and sheep responses to lime application in a grazing experiment in a high-rainfall area, south-eastern Australia. I. Pasture production

A - Papers appearing in refereed journals

Li, G. D., Helyar, K. R., Welham, S. J., Conyers, M. K., Castleman, L. J. C., Fisher, R. P., Evans, C. M., Cullis, B. R. and Cregan, P. D. 2006. Pasture and sheep responses to lime application in a grazing experiment in a high-rainfall area, south-eastern Australia. I. Pasture production. Australian Journal of Agricultural Research. 57, pp. 1045-1055. https://doi.org/10.1071/AR05298

Issues concerning the design and analysis of comparative field experiments

A - Papers appearing in refereed journals

Welham, S. J. and Clark, S. J. 2006. Issues concerning the design and analysis of comparative field experiments. Outlooks on Pest Management. 17, pp. 175-180. https://doi.org/10.1564/17aug10

Estimating the spatial scales of regionalized variables by nested sampling, hierarchical analysis of variance and residual maximum likelihood

A - Papers appearing in refereed journals

Webster, R., Welham, S. J., Potts, J. M. and Oliver, M. A. 2006. Estimating the spatial scales of regionalized variables by nested sampling, hierarchical analysis of variance and residual maximum likelihood. Computers & Geosciences. 32, pp. 1320-1333. https://doi.org/10.1016/j.cageo.2005.12.002

The analysis of longitudinal data using mixed model L-splines

A - Papers appearing in refereed journals

Welham, S. J., Cullis, B. R., Kenward, M. G. and Thompson, R. 2006. The analysis of longitudinal data using mixed model L-splines. Biometrics. 62 (2), pp. 392-401. https://doi.org/10.1111/j.1541-0420.2005.00500.x

Major genetic changes in wheat with potential to affect disease tolerance

A - Papers appearing in refereed journals

Foulkes, M. J., Paveley, N. D., Worland, A., Welham, S. J., Thomas, J. and Snape, J. W. 2006. Major genetic changes in wheat with potential to affect disease tolerance. Phytopathology. 96, pp. 680-688. https://doi.org/10.1094/PHYTO-96-0680

Light leaf spot risk reduced due to "dry" winter

G - Articles in popular magazines and other technical publications

Evans, N., Welham, S. J., Antoniw, J. F. and Fitt, B. D. L. 2006. Light leaf spot risk reduced due to "dry" winter. RRA Newsletter. No. 21, p. 1.

Development of ‘RL Plus’: winter wheat variety performance in relation to site characteristics (HGCA Project Report No. 365)

D1 - Technical reports: non-confidential

Welham, S. J., Thompson, R. and Sylvester-Bradley, R. 2005. Development of ‘RL Plus’: winter wheat variety performance in relation to site characteristics (HGCA Project Report No. 365). Stoneleigh Home Grown Cereals Authority (HGCA).

Joint modelling of competition and spatial variability in forest field trials

A - Papers appearing in refereed journals

De Resende, M. D. V., Stringer, J., Cullis, B. R. and Thompson, R. 2005. Joint modelling of competition and spatial variability in forest field trials. Revista de Matemática e Estatística, São Paulo,. 23 (2), pp. 7-22.

An update on the persistence of seeds from crops of conventional and herbicide tolerant oilseed rape (Brassica napus)

C2 - Non-edited contributions to conferences

Lutman, P. J. W., Berry, K., Payne, R. W., Simpson, E., Sweet, J. B., Champion, G. T., May, M. J., Wightman, P., Walker, K. and Lainsbury, M. 2005. An update on the persistence of seeds from crops of conventional and herbicide tolerant oilseed rape (Brassica napus). Abstracts 2nd International Conference on Co-existence between GM and non-GM based agricultural supply chains, Montpellier, 14-15 November 2005 .

Use of risk prediction models for integrated control of diseases of oilseed rape in the UK

C1 - Edited contributions to conferences/learned societies

Evans, N., Welham, S. J., Baierl, A., Antoniw, J. F., Papastamati, K., Van Den Bosch, F., Fitt, B. D. L., Gladders, P., Turner, J. A. and Elcock, S. 2005. Use of risk prediction models for integrated control of diseases of oilseed rape in the UK. Proceedings BCPC International Congress - Crop Science and Technology, Glasgow, 31 October-2 November 2005 . pp. 649-654

Estimation of genetic parameters

B - Book chapters etc edited externally

Thompson, R. 2005. Estimation of genetic parameters. in: Mrode, R. A. (ed.) Linear models for the prediction of animal breeding values, 2nd ed. CABI International, Wallingford, Oxon (CABI). pp. 235-245

The analysis of crop cultivar breeding and evaluation trials: an overview of current mixed model approaches

A - Papers appearing in refereed journals

Smith, A. B., Cullis, B. R. and Thompson, R. 2005. The analysis of crop cultivar breeding and evaluation trials: an overview of current mixed model approaches. The Journal of Agricultural Science. 143 (6), pp. 449-462. https://doi.org/10.1017/S0021859605005587

Estimation of quantitative genetic parameters

A - Papers appearing in refereed journals

Thompson, R., Brotherstone, S. and White, I. M. S. 2005. Estimation of quantitative genetic parameters. Philosophical Transactions of the Royal Society B-Biological Sciences. 360 (1459), pp. 1469-1477. https://doi.org/10.1098/rstb.2005.1676

Development of a maternal breeding goal and tools to select for this goal in UK beef production

A - Papers appearing in refereed journals

Roughsedge, T., Amer, P. R., Thompson, R. and Simm, G. 2005. Development of a maternal breeding goal and tools to select for this goal in UK beef production. Animal Science. 81 (2), pp. 221-232. https://doi.org/10.1079/ASC50230221

Modelling the effect of soil moisture on germination and emergence of wheat and sugar beet with the minimum number of parameters

A - Papers appearing in refereed journals

Rinaldi, M., Di Paolo. E., Richter, G. M. and Payne, R. W. 2005. Modelling the effect of soil moisture on germination and emergence of wheat and sugar beet with the minimum number of parameters. Annals of Applied Biology - AAB. 147 (1), pp. 69-80. https://doi.org/10.1111/j.1744-7348.2005.00018.x

Persistence of seeds from crops of conventional and herbicide tolerant oilseed rape (Brassica napus)

A - Papers appearing in refereed journals

Lutman, P. J. W., Berry, K., Payne, R. W., Simpson, E., Sweet, J. B., Champion, G. T., May, M. J., Wightman, P., Walker, K. and Lainsbury, M. 2005. Persistence of seeds from crops of conventional and herbicide tolerant oilseed rape (Brassica napus). Proceedings of the Royal Society of London Series B Biological Sciences. 272 (1575), pp. 1909-1915. https://doi.org/10.1098/rspb.2005.3166

Reduced response of insecticide-resistant aphids and attraction of parasitoids to aphid alarm pheromone; a potential fitness trade-off

A - Papers appearing in refereed journals

Foster, S. P., Denholm, I., Thompson, R., Poppy, G. M. and Powell, W. 2005. Reduced response of insecticide-resistant aphids and attraction of parasitoids to aphid alarm pheromone; a potential fitness trade-off. Bulletin of Entomological Research. 95 (1), pp. 37-46. https://doi.org/10.1079/BER2004336

Factor analytic multiplicative mixed models in the analysis of multiple experiments

A - Papers appearing in refereed journals

De Resende, M. D. V. and Thompson, R. 2004. Factor analytic multiplicative mixed models in the analysis of multiple experiments. Revista de Matemática e Estatística, São Paulo,. 22 (2), pp. 31-52.

Exploitation of aphid monitoring systems in Europe to improve observation and prediction of global change impacts on terrestrial ecosystems: EXAMINE. (Final report to the EU on contract EVK2-CT-1999-20001)

D1 - Technical reports: non-confidential

Harrington, R., Verrier, P. J., Denholm, C. H., Clarke, S. J., Welham, S. J., Maurice, D., Rounsevell, M., Cocu, N., Knight, J. and Hulle, M. 2004. Exploitation of aphid monitoring systems in Europe to improve observation and prediction of global change impacts on terrestrial ecosystems: EXAMINE. (Final report to the EU on contract EVK2-CT-1999-20001).

Algorithms, data structures and languages: the computational ingredients for innovative analysis

B - Book chapters etc edited externally

Payne, R. W. 2004. Algorithms, data structures and languages: the computational ingredients for innovative analysis. in: Adams, N., Stephens, D., Hand, D. J. and Crowder, M. (ed.) Methods and models in statistics: in honour of Professor John Nelder FRS Imperial College Press, London. pp. 95-118

Comments on the use of statistical tests in the comparison of stochastic weather generators by Qian et al. (2004)

A - Papers appearing in refereed journals

Semenov, M. A. and Welham, S. J. 2004. Comments on the use of statistical tests in the comparison of stochastic weather generators by Qian et al. (2004). Climate Research. 28 (1), pp. 83-84. https://doi.org/10.3354/cr028083

Perspectives of ANOVA, REML and a general linear mixed model

B - Book chapters etc edited externally

Cullis, B. R., Smith, A. B. and Thompson, R. 2004. Perspectives of ANOVA, REML and a general linear mixed model. in: Adams, N., Stephens, D., Hand, D. J. and Crowder, M. (ed.) Methods and models in statistics: in honour of Professor John Nelder FRS Imperial College Press. pp. 53-94

Prospects for statistical methods in animal breeding

A - Papers appearing in refereed journals

Thompson, R. and Mantysaari, E. 2004. Prospects for statistical methods in animal breeding. Journal of the Indian Society of Agricultural Statistics. 57 (Special Volume), pp. 15-25.

Multivariate character process models for the analysis of two or more correlated function-valued traits

A - Papers appearing in refereed journals

Jaffrezic, F., Thompson, R. and Pletcher, S. D. 2004. Multivariate character process models for the analysis of two or more correlated function-valued traits. Genetics. 168 (1), pp. 477-487. https://doi.org/10.1534/genetics.103.019554

Factor analytic multiplicative mixed models in the analysis of multi-environment forest field trials

C1 - Edited contributions to conferences/learned societies

Resende, M. D. V. and Thompson, R. 2004. Factor analytic multiplicative mixed models in the analysis of multi-environment forest field trials. Borralho, N. (ed.) Eucalyptus in a Changing World. Proceedings of the IUFRO Conference, Aveiro, 11-15 October 2004 .

Joint modelling of competition and spatial variability in forest field trials

C1 - Edited contributions to conferences/learned societies

Resende, M. D. V., Stringer, J., Cullis, B. and Thompson, R. 2004. Joint modelling of competition and spatial variability in forest field trials. Borralho, N. (ed.) Eucalyptus in a Changing World. Proceedings of the IUFRO Conference, Aveiro, 11-15 October 2004 .

A perspective on the measurement of time in plant disease epidemiology

A - Papers appearing in refereed journals

Lovell, D. J., Powers, S. J., Welham, S. J. and Parker, S. R. 2004. A perspective on the measurement of time in plant disease epidemiology. Plant Pathology. 53 (6), pp. 705-712. https://doi.org/10.1111/j.1365-3059.2004.01097.x

Development of the oilseed rape light leaf spot forecast: from model to mobile phone

A - Papers appearing in refereed journals

Evans, N., Welham, S. J., Baierl, A., Antoniw, J. F. and Fitt, B. D. L. 2004. Development of the oilseed rape light leaf spot forecast: from model to mobile phone. Aspects of Applied Biology. 72, pp. 67-74.

Predicting light leaf spot (Pyrenopeziza brassicae ) risk on winter oilseed rape (Brassica napus ) in England and Wales, using survey, weather and crop information

A - Papers appearing in refereed journals

Welham, S. J., Turner, J. A., Gladders, P., Fitt, B. D. L., Evans, N. and Baierl, A. 2004. Predicting light leaf spot (Pyrenopeziza brassicae ) risk on winter oilseed rape (Brassica napus ) in England and Wales, using survey, weather and crop information. Plant Pathology. 53, pp. 713-724.

Botanical and rotational implications of genetically modified herbicide tolerance in winter oilseed rape and sugar beet (BRIGHT Project)(H-GCA Project Report No. 353)

D1 - Technical reports: non-confidential

Sweet, J., Simpson, E., Law, J., Lutman, P. J. W., Berry, K. J., Payne, R. W., Champion, G. T., May, M. J., Walker, K., Wightman, P. and Lainsbury, M. 2004. Botanical and rotational implications of genetically modified herbicide tolerance in winter oilseed rape and sugar beet (BRIGHT Project)(H-GCA Project Report No. 353). Home Grown Cereals Authority (HGCA) London.

Effects of pregnancy on daily milk yield of Holstein-Friesian dairy cattle

A - Papers appearing in refereed journals

Brotherstone, S., Thompson, R. and White, I. M. S. 2004. Effects of pregnancy on daily milk yield of Holstein-Friesian dairy cattle. Livestock Production Science. 87 (2-3), pp. 265-269. https://doi.org/10.1016/j.livprodsci.2003.07.014

Calculation of multiple-trait sire reliability for traits included in a dairy cattle fertility index

A - Papers appearing in refereed journals

Banos, G., Brotherstone, S., Thompson, R., Woolliams, J. A., Wall, E. and Coffey, M. P. 2004. Calculation of multiple-trait sire reliability for traits included in a dairy cattle fertility index. Animal Science. 79 (1), pp. 1-9. https://doi.org/10.1017/S1357729800054473

Prediction in linear mixed models

A - Papers appearing in refereed journals

Welham, S. J., Cullis, B. R., Gogel, B., Gilmour, A. and Thompson, R. 2004. Prediction in linear mixed models. Australian & New Zealand Journal of Statistics. 46 (3), pp. 325-347. https://doi.org/10.1111/j.1467-842X.2004.00334.x

Tolerance of septoria leaf blotch in winter wheat

A - Papers appearing in refereed journals

Parker, S. R., Welham, S. J., Paveley, N. D., Foulkes, J. and Scott, R. K. 2004. Tolerance of septoria leaf blotch in winter wheat. Plant Pathology. 53 (1), pp. 1-10. https://doi.org/10.1111/j.1365-3059.2004.00951.x

An efficient computing strategy for prediction in mixed linear models

A - Papers appearing in refereed journals

Gilmour, A., Cullis, B. R., Welham, S. J., Gogel, B. and Thompson, R. 2004. An efficient computing strategy for prediction in mixed linear models. Computational Statistics & Data Analysis. 44 (4), pp. 571-586. https://doi.org/10.1016/S0167-9473(02)00258-X

Position of inoculum in the canopy affects the risk of septoria tritici blotch epidemics in winter wheat

A - Papers appearing in refereed journals

Lovell, D. J., Parker, S. R., Hunter, T., Welham, S. J. and Nichols, A. R. 2004. Position of inoculum in the canopy affects the risk of septoria tritici blotch epidemics in winter wheat. Plant Pathology. 53 (1), pp. 11-21. https://doi.org/10.1046/j.1365-3059.2003.00939.x

Using a correlated probit model approximation to estimate the variance for binary matched pairs

A - Papers appearing in refereed journals

Waddington, D. and Thompson, R. 2004. Using a correlated probit model approximation to estimate the variance for binary matched pairs. Statistics and Computing. 14 (2), pp. 83-90. https://doi.org/10.1023/B:STCO.0000021406.25797.98

Modelling and estimation for the genetic analysis of longitudinal data

C1 - Edited contributions to conferences/learned societies

Thompson, R. and Jaffrezic, F. 2003. Modelling and estimation for the genetic analysis of longitudinal data. International Statistical Institute (ISI).

Testing the adequacy of measured data for evaluating nitrogen turnover models by the dot-to-dot method

A - Papers appearing in refereed journals

Smith, J. U., Smith, P., Richter, G. M., Agostini, F. A. and Welham, S. J. 2003. Testing the adequacy of measured data for evaluating nitrogen turnover models by the dot-to-dot method. European Journal of Soil Science. 54 (1), pp. 175-185. https://doi.org/10.1046/j.1365-2389.2003.00501.x

Multiplicative mixed models for the analysis of sensory evaluation data

A - Papers appearing in refereed journals

Smith, A., Cullis, B. R., Brockoff, P. and Thompson, R. 2003. Multiplicative mixed models for the analysis of sensory evaluation data. Food Quality and Preference. 14 (5-6), pp. 387-395. https://doi.org/10.1016/S0950-3293(03)00014-4

Multivariate spatial statistical analysis in perennial crops

C2 - Non-edited contributions to conferences

Vilela De Resende, M. D., Thompson, R., Welham, S. J. and Baierl, A. 2003. Multivariate spatial statistical analysis in perennial crops. Abstracts International Biometric Society British Region Conference, Reading, 16-18 September 2003 . pp. 70

Structured antedependence models for genetic analysis of repeated measures on multiple quantitative traits

A - Papers appearing in refereed journals

Jaffrezic, F., Thompson, R. and Hill, W. G. 2003. Structured antedependence models for genetic analysis of repeated measures on multiple quantitative traits. Genetics Research. 82 (1), pp. 55-65. https://doi.org/10.1017/S0016672303006281

A sparse implementation of the average information algorithm for factor analytic and reduced rank variance models

A - Papers appearing in refereed journals

Thompson, R., Cullis, B. R., Smith, A. and Gilmour, A. 2003. A sparse implementation of the average information algorithm for factor analytic and reduced rank variance models. Australian & New Zealand Journal of Statistics. 45 (4), pp. 445-459. https://doi.org/10.1111/1467-842X.00297

The analysis of quantitative trait loci in multi-environment trials using a multiplicative mixed model

A - Papers appearing in refereed journals

Verbyla, A. P., Eckermann, P. J., Thompson, R. and Cullis, B. R. 2003. The analysis of quantitative trait loci in multi-environment trials using a multiplicative mixed model. Australian Journal of Agricultural Research. 54 (12), pp. 1395-1408. https://doi.org/10.1071/AR02239

Use of the score test as a goodness-of-fit measure of the covariance structure in genetic analysis of longitudinal data

A - Papers appearing in refereed journals

Jaffrezic, F., White, I. M. S. and Thompson, R. 2003. Use of the score test as a goodness-of-fit measure of the covariance structure in genetic analysis of longitudinal data. Genetics Selection Evolution. 35, pp. 185-198. https://doi.org/10.1051/gse:2003003

Gauss-Hermite quadrature approximation for estimation in generalised linear mixed models

A - Papers appearing in refereed journals

Pan, J. and Thompson, R. 2003. Gauss-Hermite quadrature approximation for estimation in generalised linear mixed models. Computational Statistics. 18 (1), pp. 57-78. https://doi.org/10.1007/s001800300132

General balance, large data sets and extensions to unbalanced treatment structures

A - Papers appearing in refereed journals

Payne, R. W. 2003. General balance, large data sets and extensions to unbalanced treatment structures. Computational Statistics & Data Analysis. 44 (1-2), pp. 297-304. https://doi.org/10.1016/S0167-9473(03)00094-X

Association of MACE-based insecticide resistance in Myzus persicae with reproductive rate, response to alarm pheromone and vulnerability to attack by Aphidius colemani

A - Papers appearing in refereed journals

Foster, S. P., Kift, N. B., Baverstock, J., Sime, S., Reynolds, K., Jones, J. E., Thompson, R. and Tatchell, G. M. 2003. Association of MACE-based insecticide resistance in Myzus persicae with reproductive rate, response to alarm pheromone and vulnerability to attack by Aphidius colemani. Pest Management Science. 59 (11), pp. 1169-1178. https://doi.org/10.1002/ps.751

Spatial aspects of light leaf spot (Pyrenopeziza brassicae ) epidemic development on winter oilseed rape (Brassica napus ) in the United Kingdom

A - Papers appearing in refereed journals

Evans, N., Baierl, A., Brain, P., Welham, S. J. and Fitt, B. D. L. 2003. Spatial aspects of light leaf spot (Pyrenopeziza brassicae ) epidemic development on winter oilseed rape (Brassica napus ) in the United Kingdom. Phytopathology. 93 (6), pp. 657-665. https://doi.org/10.1094/PHYTO.2003.93.6.657

Interactive forecasting of light leaf spot (Pyrenopeziza brassicae ) risk for winter oilseed rape on the internet

C1 - Edited contributions to conferences/learned societies

Evans, N., Steed, J. M., Welham, S. J., Antoniw, J. F., Baierl, A., Turner, J. A., Gladders, P. and Fitt, B. D. L. 2003. Interactive forecasting of light leaf spot (Pyrenopeziza brassicae ) risk for winter oilseed rape on the internet. Proceedings 11th International Rapeseed Congress, Copenhagen, 6-10 July 2003 . pp. 1067-1069

Genetic parameters and evaluations from single- and multiple- trait analysis of dairy cow fertility and milk production

A - Papers appearing in refereed journals

Kadarmideen, H. N., Thompson, R., Coffey, M. P. and Kossaibati, M. A. 2003. Genetic parameters and evaluations from single- and multiple- trait analysis of dairy cow fertility and milk production. Livestock Production Science. 81 (2-3), pp. 183-195. https://doi.org/10.1016/S0301-6226(02)00274-9

Impacts of environmental change on aphids throughout Europe

C2 - Non-edited contributions to conferences

Harrington, R., Denholm, C. H., Verrier, P. J., Clark, S. J., Welham, S. J., Hulle, M., Maurice, D., Rounsevell, M., Cocu, N., Knight, J., Bell, N., Barbagallo, S., Basky, Z., Coceano, P. G., Derron, J., Katis, N., Lukasova, H., Marrkula, I., Mohar, J., Pickup, J., Rolot, J-L., Ruszkowska, M., Schliephake, E., Seco-Fernandez, M-V., Sigvald, R., Tsitsipis, J. and Ulber, B. 2003. Impacts of environmental change on aphids throughout Europe. Abstracts Integrated Biological Systems Conference, San Antonio, Texas, 14-16 April 2003 . pp. 39-40

Variation in response to neonicotinoid insecticides in peach-potato aphids, Myzus persicae (Hemiptera: Aphididae)

A - Papers appearing in refereed journals

Foster, S. P., Denholm, I. and Thompson, R. 2003. Variation in response to neonicotinoid insecticides in peach-potato aphids, Myzus persicae (Hemiptera: Aphididae). Pest Management Science. 59 (2), pp. 166-173. https://doi.org/10.1002/ps.570

Modelling the daily progress of light leaf spot epidemics on winter oilseed rape (Brassica napus ), in relation to Pyrenopeziza brassicae inoculum concentrations and weather factors

C2 - Non-edited contributions to conferences

Papastamati, K., Van Den Bosch, F., Welham, S. J., Fitt, B. D. L., Evans, N. and Steed, J. M. 2002. Modelling the daily progress of light leaf spot epidemics on winter oilseed rape (Brassica napus ), in relation to Pyrenopeziza brassicae inoculum concentrations and weather factors. Cambridge University Press (CUP).

Examine(exploitation of aphis monitoring in europe): an EU thematic network for the study of global change impacts on aphid dynamics

C2 - Non-edited contributions to conferences

Denholm, C. H., Barbagallo, S., Basky, Z., Bell, J. N. B., Clark, S. J., Coceano, P-G., Cocu, N., Colucci, R., Derron, J., Ferrara, V., Gotlin Euljak, T., Harrington, R., Hatala Zseller, I., Hulle, M., Katis, N., Knight, J. D., Limonta, L., Lukasova, H., Markkula, I., Maurice, D., Mohar, J., Pickup, J., Rolot, J-L., Rounsevell, M. D. A., Ruszkowska, M., Schleiphake, E., Seco-Fernandez, M. V., Sigvald, R., Verrier, P. J. and Welham, S. J. 2002. Examine(exploitation of aphis monitoring in europe): an EU thematic network for the study of global change impacts on aphid dynamics. Abstracts 7th European Congress of Entomology, Thessaloniki, 7-13 October 2002 . pp. 317

Improving and exploiting self-defence against wheat diseases

C1 - Edited contributions to conferences/learned societies

Parker, S. R., Paveley, N. D., Foulkes, M. J., Lovell, D. J., Welham, S. J. and Worland, A. J. 2002. Improving and exploiting self-defence against wheat diseases. Proceedings Brighton Crop Protection Conference - Pests and Diseases, 2002 . pp. 919-924

Analysis of time series

B - Book chapters etc edited externally

Tunnicliffe Wilson, G. and Welham, S. J. 2002. Analysis of time series. in: Payne, R. W. (ed.) Guide to GenStat release 6.1. Part 2. Statistics VSN International, Hemel Hempstead. pp. 705-788

REML analysis of mixed models

B - Book chapters etc edited externally

Thompson, R. and Welham, S. J. 2002. REML analysis of mixed models. in: Payne, R. W. (ed.) Guide to GenStat release 6.1. Part 2. Statistics Hemel Hempstead VSN International. pp. 461-560

Design and analysis of experiments

B - Book chapters etc edited externally

Payne, R. W. 2002. Design and analysis of experiments. in: Payne, R. W. (ed.) Guide to GenStat release 6.1. Part 2. Statistics VSN International, Hemel Hempstead. pp. 281-460

Introduction

B - Book chapters etc edited externally

Payne, R. W. 2002. Introduction. in: Payne, R. W. (ed.) Guide to GenStat release 6.1. Part 2. Statistics VSN International, Hemel Hempstead. pp. 1-18

Summary of other facilities

B - Book chapters etc edited externally

Payne, R. W. 2002. Summary of other facilities. in: Payne, R. W. (ed.) GenStat release 6.1 reference manual. Part 1. Summary VSN International, Hemel Hempstead. pp. 447-462

GenStat release 6.1 reference manual. Part 3. Procedure library PL14

E - Books edited/written by staff member, alone/with others

Payne, R. W. Arnold, G. M. (ed.) 2002. GenStat release 6.1 reference manual. Part 3. Procedure library PL14. VSN International, Hemel Hempstead.

GenStat release 6.1 reference manual. Part 2. Directives

E - Books edited/written by staff member, alone/with others

Payne, R. W., Baird, D. B., Cherry, M., Gilmour, A. R., Harding, S. A., Lane, P. W., Morgan, G. W., Murray, D. A., Soutar, D. M., Thompson, R., Todd, A. D., Tunnicliffe Wilson, G., Webster, R. and Welham, S. J. 2002. GenStat release 6.1 reference manual. Part 2. Directives. Hemel Hempstead VSN International.

GenStat release 6.1 reference manual. Part 1. Summary

E - Books edited/written by staff member, alone/with others

Payne, R. W., Baird, D. B., Cherry, M., Gilmour, A. R., Harding, S. A., Lane, P. W., Morgan, G. W., Murray, D. A., Soutar, D. M., Thompson, R., Todd, A. D., Tunnicliffe Wilson, G., Webster, R. and Welham, S. J. 2002. GenStat release 6.1 reference manual. Part 1. Summary. Hemel Hempstead VSN International.

Agricultural experiments

B - Book chapters etc edited externally

Payne, R. W. 2002. Agricultural experiments. in: Greenfield, T. (ed.) Research methods for postgraduates, 2nd ed Arnold, London. pp. 163-171

ASREML user guide release 1.0

D1 - Technical reports: non-confidential

Gilmour, A. R., Gogel, B. J., Cullis, B. R., Welham, S. J. and Thompson, R. 2002. ASREML user guide release 1.0. VSN International, Hemel Hempstead.

Comparison of nested simulated annealing and reactive tabu search for efficient experimental designs with correlated data

C1 - Edited contributions to conferences/learned societies

Coombes, N. E., Payne, R. W. and Lisboa, P. 2002. Comparison of nested simulated annealing and reactive tabu search for efficient experimental designs with correlated data. Haerdle, W. and Ronz, B. (ed.) COMPSTAT 2002: Proceedings 15th Conference in Computational Statistics, Berlin, 24-28 August 2002 . Physica-Verlag, Heidelberg. pp. 249-254

Contrasting models for lactation curve analysis

A - Papers appearing in refereed journals

Jaffrezic, F., White, I. M. S., Thompson, R. and Visscher, P. M. 2002. Contrasting models for lactation curve analysis. Journal of Dairy Science. 85 (4), pp. 968-975. https://doi.org/10.3168/jds.S0022-0302(02)74156-8

Heritability, reliability of genetic evaluations and response to selection in proportional hazard models

A - Papers appearing in refereed journals

Yazdi, M. H., Visscher, P. M., Ducrocq, V. and Thompson, R. 2002. Heritability, reliability of genetic evaluations and response to selection in proportional hazard models. Journal of Dairy Science. 85 (6), pp. 1563-1577. https://doi.org/10.3168/jds.S0022-0302(02)74226-4

Development and mapping of SSR markers for maize

A - Papers appearing in refereed journals

Sharopova, N., Mcmullen, M. D., Schultz, L., Schroeder, S., Sanchez-Villeda, H., Gardiner, J., Bergstrom, D., Houchins, K., Melia-Hancock, S., Musket, T., Duru, N., Polacco, M., Edwards, K. J., Ruff, T., Register, J. C., Brouwer, C., Thompson, R., Velasco, R., Chin, E., Lee, M. R. F., Woodman-Clikeman, W., Long, M. J., Liscum, E., Cone, K., Davis, G. and Coe, E. H. Jr 2002. Development and mapping of SSR markers for maize. Plant Molecular Biology. 48 (5-6), pp. 463-481.

Quantification of raindrop kinetic energy for improved prediction of splash-dispersed pathogens

A - Papers appearing in refereed journals

Lovell, D. J., Parker, S. R., Van Peteghem, P., Webb, D. A. and Welham, S. J. 2002. Quantification of raindrop kinetic energy for improved prediction of splash-dispersed pathogens. Phytopathology. 92 (5), pp. 497-503. https://doi.org/10.1094/PHYTO.2002.92.5.497

Interactive forecasting on the Internet of light leaf spot (Pyrenopeziza brassicae ) risk for winter oilseed rape

C1 - Edited contributions to conferences/learned societies

Evans, N., Steed, J. M., Welham, S. J., Antoniw, J. F., Turner, J. A., Gladders, P. and Fitt, B. D. L. 2002. Interactive forecasting on the Internet of light leaf spot (Pyrenopeziza brassicae ) risk for winter oilseed rape.

Aplicacion de la estadistica

C2 - Non-edited contributions to conferences

Thompson, R. 2002. Aplicacion de la estadistica. Solemne acto academico de investidura como Doctor Honoris Causa del Excmo. Sr. D. Daniel Gianola y del Excmo. Sr. D. Robin Thompson, Universidad Politecnica de Valencia, 8 November 2002 .

A review of genetic parameter estimation

C1 - Edited contributions to conferences/learned societies

Thompson, R. 2002. A review of genetic parameter estimation. Proceedings 7th World Congress on Genetics Applied to Livestock Production, Montpellier, 19-23 August 2002 . pp. 17-01

ASREML estimates variance matrices from multivariate data using the animal model

C1 - Edited contributions to conferences/learned societies

Gilmour, A. R., Thompson, R., Cullis, B. R. and Welham, S. J. 2002. ASREML estimates variance matrices from multivariate data using the animal model. Proceedings 7th World Congress on Genetics Applied to Livestock Production, Montpellier, 19-23 August 2002 . pp. 28-05

Statistical models for the genetic analysis of longitudinal data

C1 - Edited contributions to conferences/learned societies

Jaffrezic, F., White, I. M. S., Thompson, R., Visscher, P. M. and Hill, W. G. 2002. Statistical models for the genetic analysis of longitudinal data. Proceedings 7th World Congress on Genetics Applied to Livestock Production, Montpellier, 19-23 August 2002 . pp. 16-08

Foliar insect pest management on cowpea (Vigna unguiculata Walpers) in simulated varietal mixtures II. Pest resistance management implications

A - Papers appearing in refereed journals

Ward, A., Morse, S., Denholm, I., Thompson, R. and Mcnamara, N. 2002. Foliar insect pest management on cowpea (Vigna unguiculata Walpers) in simulated varietal mixtures II. Pest resistance management implications. Field Crops Research. 79 (1), pp. 67-80. https://doi.org/10.1016/S0378-4290(02)00137-5

Exploring variety - environment data using random effects AMMI models with adjustments for spatial field trend: Part 2. Applications

B - Book chapters etc edited externally

Smith, A., Cullis, B. R., Luckett, D., Hollamby, G. and Thompson, R. 2002. Exploring variety - environment data using random effects AMMI models with adjustments for spatial field trend: Part 2. Applications. in: Kang, M. S. (ed.) Quantitative genetics, genomics and plant breeding Wallingford, Oxon CAB International (CABI). pp. 337-351

Exploring variety - environment data using random effects AMMI models with adjustments for spatial field trend: Part 1. Theory

B - Book chapters etc edited externally

Smith, A., Cullis, B. R. and Thompson, R. 2002. Exploring variety - environment data using random effects AMMI models with adjustments for spatial field trend: Part 1. Theory. in: Kang, M. S. (ed.) Quantitative genetics, genomics and plant breeding Wallingford, Oxon CAB International (CABI). pp. 323-335

Bioassay and field-simulator studies of the efficacy of pymetrozine against peach-potato aphids, Myzus persicae (Hemiptera: Aphididae), possessing different mechanisms of insecticide resistance

A - Papers appearing in refereed journals

Foster, S. P., Denholm, I. and Thompson, R. 2002. Bioassay and field-simulator studies of the efficacy of pymetrozine against peach-potato aphids, Myzus persicae (Hemiptera: Aphididae), possessing different mechanisms of insecticide resistance. Pest Management Science. 58 (8), pp. 805-810. https://doi.org/10.1002/ps.529

Analysing repeated measurements in soil monitoring and experimentation

A - Papers appearing in refereed journals

Webster, R. and Payne, R. W. 2002. Analysing repeated measurements in soil monitoring and experimentation. European Journal of Soil Science. 53 (1), pp. 1-13. https://doi.org/10.1046/j.1365-2389.2002.00408.x

On the mapping of quantitative trait loci at marker and non-marker locations

A - Papers appearing in refereed journals

Walling, G. A., Haley, C. S., Perez-Enciso, M., Thompson, R. and Visscher, P. M. 2002. On the mapping of quantitative trait loci at marker and non-marker locations. Genetics Research. 79 (1), pp. 97-106. https://doi.org/10.1017/S0016672301005420

Modelling the daily progress of light leaf spot epidemics on winter oilseed rape (Brassica napus ), in relation to Pyrenopeziza brassicae inoculum concentrations and weather factors

A - Papers appearing in refereed journals

Papastamati, K., Van Den Bosch, F., Welham, S. J., Fitt, B. D. L., Evans, N. and Steed, J. M. 2002. Modelling the daily progress of light leaf spot epidemics on winter oilseed rape (Brassica napus ), in relation to Pyrenopeziza brassicae inoculum concentrations and weather factors. Ecological Modelling. 148, pp. 169-189.

Changes in populations of the eyespot fungi Tapesia yallundae and T. acuformis under different fungicide regimes in successive crops of winter wheat, 1984-2000

A - Papers appearing in refereed journals

Bierman, S. M., Fitt, B. D. L., Van Den Bosch, F., Bateman, G. L., Jenkyn, J. F. and Welham, S. J. 2002. Changes in populations of the eyespot fungi Tapesia yallundae and T. acuformis under different fungicide regimes in successive crops of winter wheat, 1984-2000. Plant Pathology. 51 (2), pp. 191-201. https://doi.org/10.1046/j.1365-3059.2002.00673.x

Modelling the daily progress of light leaf spot epidemics on winter oilseed rape (Brassica napus ) in relation to Pyrenopeziza brassicae inoculum concentrations and weather factors

C2 - Non-edited contributions to conferences

Papastamati, K., Van Den Bosch, F., Welham, S. J., Fitt, B. D. L., Evans, N. and Steed, J. M. 2001. Modelling the daily progress of light leaf spot epidemics on winter oilseed rape (Brassica napus ) in relation to Pyrenopeziza brassicae inoculum concentrations and weather factors. Abstracts 8th International Workshop on Plant Disease Epidemiology, Ouro Preto, Brazil, 6-11 May 2001 .

Modelling the progress of light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape (Brassica napus ) in relation to leaf wetness and temperature

A - Papers appearing in refereed journals

Papastamati, K., Welham, S. J., Fitt, B. D. L. and Gladders, P. 2001. Modelling the progress of light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape (Brassica napus ) in relation to leaf wetness and temperature. Plant Pathology. 50 (2), pp. 154-164. https://doi.org/10.1046/j.1365-3059.2001.00551.x

Synthesis of direct and maternal genetic compounds of economically important traits from beef breed-cross evaluations

A - Papers appearing in refereed journals

Roughsedge, T., Thompson, R., Villanueva, B. and Simm, G. 2001. Synthesis of direct and maternal genetic compounds of economically important traits from beef breed-cross evaluations. Journal of Animal Science. 79 (9), pp. 2307-2319. https://doi.org/10.2527/2001.7992307x

Analyzing variety by environment data using multiplicative mixed models and adjustments for spatial field trend

A - Papers appearing in refereed journals

Smith, A., Cullis, B. R. and Thompson, R. 2001. Analyzing variety by environment data using multiplicative mixed models and adjustments for spatial field trend. Biometrics. 57 (4), pp. 1138-1147. https://doi.org/10.1111/j.0006-341X.2001.01138.x

The analysis of quantitative traits in wheat mapping populations

A - Papers appearing in refereed journals

Eckermann, P. J., Verbyla, A. P., Cullis, B. R. and Thompson, R. 2001. The analysis of quantitative traits in wheat mapping populations. Australian Journal of Agricultural Research. 52 (12), pp. 1195-1206. https://doi.org/10.1071/AR01039

Statistical validation of genetic models

A - Papers appearing in refereed journals

Thompson, R. 2001. Statistical validation of genetic models. Livestock Production Science. 72 (1-2), pp. 129-134. https://doi.org/10.1016/S0301-6226(01)00273-1

Modelling of rain splash trajectories and prediction of rain splash height

A - Papers appearing in refereed journals

Pietravalle, S., Van Den Bosch, F., Welham, S. J., Parker, S. R. and Lovell, D. J. 2001. Modelling of rain splash trajectories and prediction of rain splash height. Agricultural and Forest Meteorology. 109, pp. 171-185. https://doi.org/10.1016/S0168-1923(01)00267-2

Stem canker on winter oilseed rape during three growing seasons in England, France and Poland: an ACCESS database of results from the IMASCORE field experiments

J - Computer programs

Leech, P. K. and Welham, S. J. 2001. Stem canker on winter oilseed rape during three growing seasons in England, France and Poland: an ACCESS database of results from the IMASCORE field experiments.

Modelling the effects of temperature and wetness duration on development of light leaf spot on oilseed rape leaves inoculated with Pyrenopeziza brassicae conidia

A - Papers appearing in refereed journals

Gilles, T., Fitt, B. D. L., Welham, S. J., Evans, N., Steed, J. M. and Jeger, M. J. 2001. Modelling the effects of temperature and wetness duration on development of light leaf spot on oilseed rape leaves inoculated with Pyrenopeziza brassicae conidia. Plant Pathology. 50 (1), pp. 42-52. https://doi.org/10.1046/j.1365-3059.2001.00542.x

Relationships between phoma leaf spot and development of stem canker (Leptosphaeria maculans ) on winter oilseed rape (Brassica napus ) in southern England

A - Papers appearing in refereed journals

Sun, P., Fitt, B. D. L., Gladders, P. and Welham, S. J. 2000. Relationships between phoma leaf spot and development of stem canker (Leptosphaeria maculans ) on winter oilseed rape (Brassica napus ) in southern England. Annals of Applied Biology - AAB. 137 (2), pp. 113-125. https://doi.org/10.1111/j.1744-7348.2000.tb00043.x

Linear and threshold model genetic parameters for disease, fertility and milk production in dairy cattle

A - Papers appearing in refereed journals

Kadarmideen, H. N., Thompson, R. and Simm, G. 2000. Linear and threshold model genetic parameters for disease, fertility and milk production in dairy cattle. Animal Science. 71 (3), pp. 411-419. https://doi.org/10.1017/S1357729800055338

Generalized linear mixed models: an improved estimating procedure

C1 - Edited contributions to conferences/learned societies

Pan, J-X. and Thompson, R. 2000. Generalized linear mixed models: an improved estimating procedure. Bethlehem, J. G. and Vanderheijden, P. G. M. (ed.) COMPSTAT: Proceedings in Computational Statistics 2000 . Physica-Verlag, Heidelberg. pp. 373-378

A comparison of modelling methods for forecasting light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape in the UK

C1 - Edited contributions to conferences/learned societies

Welham, S. J., Papastamati, K., Fitt, B. D. L., Turner, J. A. and Gladders, P. 2000. A comparison of modelling methods for forecasting light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape in the UK. Proceedings Brighton Crop Protection Conference - Pests and Diseases, 2000 . pp. 801-808

Introducing an interactive Internet based forecasting system for light leaf spot of winter oilseed rape in the UK

G - Articles in popular magazines and other technical publications

Evans, N., Antoniw, J. F., Fitt, B. D. L., Gladders, P. and Welham, S. J. 2000. Introducing an interactive Internet based forecasting system for light leaf spot of winter oilseed rape in the UK. GCIRC Bulletin. 17, pp. 48-52.

Predicting leaf infection by Leptosphaeria maculans on winter oilseed rape

C1 - Edited contributions to conferences/learned societies

West, J. S., Evans, N., Leech, P. K., Fitt, B. D. L., Welham, S. J., Jedryczka, M. and Penaud, A. 2000. Predicting leaf infection by Leptosphaeria maculans on winter oilseed rape.

Effects of stem canker (Leptosphaeria maculans ) and light leaf spot (Pyrenopeziza brassicae ) on yield of winter oilseed rape (Brassica napus ) in southern England

A - Papers appearing in refereed journals

Zhou, Y., Fitt, B. D. L., Welham, S. J., Evans, N. and Gladders, P. 2000. Effects of stem canker (Leptosphaeria maculans ) and light leaf spot (Pyrenopeziza brassicae ) on yield of winter oilseed rape (Brassica napus ) in southern England. Plant Pathology. 49, pp. 487-497.

Effects of temperature and wetness duration on conidial infection, latent period and asexual sporulation of Pyrenopeziza brassicae on leaves of oilseed rape

A - Papers appearing in refereed journals

Gilles, T., Fitt, B. D. L., Kennedy, R., Welham, S. J. and Jeger, M. J. 2000. Effects of temperature and wetness duration on conidial infection, latent period and asexual sporulation of Pyrenopeziza brassicae on leaves of oilseed rape. Plant Pathology. 49 (4), pp. 498-508. https://doi.org/10.1046/j.1365-3059.2000.00474.x

Spectral analysis of spatial point patterns in incompletely observed regions

C1 - Edited contributions to conferences/learned societies

Alexander, C. J., Mugglestone, M. A., Taylor, P. C., Thompson, R. and Morgan, G. W. 2000. Spectral analysis of spatial point patterns in incompletely observed regions. Proceedings International Conference on Spatial Temporal Modelling and its Applications, Leeds, 7-9 July 1999 . Leeds University Press. pp. 113-116

Marker-assisted selection using ridge regression

A - Papers appearing in refereed journals

Whittaker, J. C., Thompson, R. and Denham, M. C. 2000. Marker-assisted selection using ridge regression. Genetics Research. 75 (2), pp. 249-252. https://doi.org/10.1017/S0016672399004462

A data warehouse for designed experiments

A - Papers appearing in refereed journals

Payne, R. W., Harding, S. A., Dhaliwal,J. A. and Dhaliwal, S. S. 2000. A data warehouse for designed experiments. Computational Statistics. 15, pp. 99-108.

A parsimonious, multiple-regression model of wheat yield response to environment

A - Papers appearing in refereed journals

Landau, S., Mitchell, R. A. C., Barnett, V., Colls, J. J., Craigon, J. and Payne, R. W. 2000. A parsimonious, multiple-regression model of wheat yield response to environment. Agricultural and Forest Meteorology. 101 (2-3), pp. 151-166. https://doi.org/10.1016/S0168-1923(99)00166-5

A link function approach to model heterogeneity of residual variances over time in lactation curve analyses

A - Papers appearing in refereed journals

Jaffrezic, F., White, I. M. S., Thompson, R. and Hill, W. G. 2000. A link function approach to model heterogeneity of residual variances over time in lactation curve analyses. Journal of Dairy Science. 83 (5), pp. 1089-1093. https://doi.org/10.3168/jds.S0022-0302(00)74973-3

Forecasting light leaf spot of winter oilseed rape in the UK

C2 - Non-edited contributions to conferences

Evans, N., Fitt, B. D. L. and Welham, S. J. 1999. Forecasting light leaf spot of winter oilseed rape in the UK.

Optimising the use of fungicides to control stem canker of oilseed rape

C1 - Edited contributions to conferences/learned societies

West, J. S., Leech, P. K., Fitt, B. D. L., Welham, S. J., Penaud, A., Peres, A. and Poisson, B. 1999. Optimising the use of fungicides to control stem canker of oilseed rape. Proceedings 10th International Rapeseed Congress: New Horizons for an Old Crop, Canberra, 26-29 September 1999. (CD-ROM) .

Yield loss of winter oilseed rape in relation to severity of stem canker (Leptosphaeria maculans ) in the UK

C1 - Edited contributions to conferences/learned societies

Zhou, Y., Fitt, B. D. L., Welham, S. J., Gladders, P., Sansford, C. E. and West, J. S. 1999. Yield loss of winter oilseed rape in relation to severity of stem canker (Leptosphaeria maculans ) in the UK. Proceedings 10th International Rapeseed Congress: New Horizons for an Old Crop, Canberra, 26-29 September 1999. (CD-ROM) .

Effects of temperature and wetness duration on infection of oilseed rape by ascospores of A-group or B-group Leptosphaeria maculans (stem canker)

C1 - Edited contributions to conferences/learned societies

Biddulph, J. E., Fitt, B. D. L., Jedryczka, M., West, J. S. and Welham, S. J. 1999. Effects of temperature and wetness duration on infection of oilseed rape by ascospores of A-group or B-group Leptosphaeria maculans (stem canker). Proceedings 10th International Rapeseed Congress: New Horizons for an Old Crop, Canberra, 26-29 September 1999. (CD-ROM) .

Epidemiology, forecasting and management of winter oilseed rape diseases in the UK

C1 - Edited contributions to conferences/learned societies

Fitt, B. D. L., Gladders, P., Sutherland, K. G., Turner, J. A. and Welham, S. J. 1999. Epidemiology, forecasting and management of winter oilseed rape diseases in the UK. Proceedings 10th International Rapeseed Congress: New Horizons for an Old Crop, Canberra, 26-29 September 1999. (CD-ROM) .

The analysis of designed experiments and longitudinal data using smoothing splines

A - Papers appearing in refereed journals

Verbyla, A. P., Cullis, B. R., Kenward, M. G. and Welham, S. J. 1999. The analysis of designed experiments and longitudinal data using smoothing splines. Applied Statistics. 48, pp. 269-311. https://doi.org/10.1111/1467-9876.00154

A comparison of two survival analysis methods with the number of lactations as a discrete time value

C1 - Edited contributions to conferences/learned societies

Yazdi, M. H., Thompson, R., Ducrocq, V. and Visscher, P. 1999. A comparison of two survival analysis methods with the number of lactations as a discrete time value. Proceedings international workshop on EU concerted action Genetic Improvement of Functional Traits in Cattle (GIFT). Interbull.

Forecasting light leaf spot (Pyrenopeziza brassicae ) of winter oilseed rape (Brassica napus ) on the Internet

A - Papers appearing in refereed journals

Souter, S. D., Castells-Brooke, N. I. D., Antoniw, J. F., Welham, S. J., Fitt, B. D. L., Evans, N., Gladders, P., Turner, J. A. and Sutherland, K. 1999. Forecasting light leaf spot (Pyrenopeziza brassicae ) of winter oilseed rape (Brassica napus ) on the Internet. Aspects of Applied Biology. 55, pp. 37-42.

Quantification of rainsplash for improved prediction of Septoria disease risk

A - Papers appearing in refereed journals

Lovell, D. J., Parker, S. R., Van Petegheim, P., Webb, D. A. and Welham, S. J. 1999. Quantification of rainsplash for improved prediction of Septoria disease risk. Aspects of Applied Biology. 55, pp. 7-14.

Genetic analysis of longevity data in the UK: present practice and considerations for the future

C1 - Edited contributions to conferences/learned societies

Visscher, P., Thompson, R., Yazdi, H., Hill, W. G. and Brotherstone, S. 1999. Genetic analysis of longevity data in the UK: present practice and considerations for the future. Proceedings of the Genetic Improvement of Functional Traits in cattle longevity, Interbull. Jouy-en-Jossas, France, 1999.

Prospects for statistical methods in dairy cattle breeding

C1 - Edited contributions to conferences/learned societies

Thompson, R. and Mantysaari, E. A. 1999. Prospects for statistical methods in dairy cattle breeding. Proceedings of the Genetic Improvement of Functional Traits in cattle longevity, Interbull. Jouy-en-Jossas, France, 1999.

Effects of severity and timing of stem canker (Leptosphaeria maculans ) symptoms on yield of winter oilseed rape (Brasica napus ) in the UK

A - Papers appearing in refereed journals

Zhou, Y., Fitt, B. D. L., Welham, S. J., Gladders, P., Sansford, C. E. and West, J. S. 1999. Effects of severity and timing of stem canker (Leptosphaeria maculans ) symptoms on yield of winter oilseed rape (Brasica napus ) in the UK. European Journal of Plant Pathology. 105, pp. 715-728. https://doi.org/10.1023/A:1008761219493

Effects of temperature and wetness duration on infection of oilseed rape leaves by ascospores of Leptosphaeria maculans (stem canker)

A - Papers appearing in refereed journals

Biddulph, J. E., Fitt, B. D. L., Leech, P. K., Welham, S. J. and Gladders, P. 1999. Effects of temperature and wetness duration on infection of oilseed rape leaves by ascospores of Leptosphaeria maculans (stem canker). European Journal of Plant Pathology. 105, pp. 769-781.

Relationships between regional weather and incidence of light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape in England and Wales

C1 - Edited contributions to conferences/learned societies

Welham, S. J., Fitt, B. D. L., Turner, J. A., Gladders, P. and Sutherland, K. 1999. Relationships between regional weather and incidence of light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape in England and Wales. Protection and Production of Combinable Break Crops. Aspects of Applied Biology 56 . pp. 51-59

Modelling the progress of light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape (Brassica napus) in relation to weather criteria

C1 - Edited contributions to conferences/learned societies

Papastamati, K., Welham, S. J., Fitt, B. D. L. and Gladders, P. 1999. Modelling the progress of light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape (Brassica napus) in relation to weather criteria. Information Technology for Crop Protection. Aspects of Applied Biology 55 . pp. 49-55

Sampling winter oilseed rape crops to assess incidence of light leaf spot (Pyrenopeziza brassicae ) in the UK

C1 - Edited contributions to conferences/learned societies

Evans, N., Fitt, B. D. L., McCartney, H. A., Welham, S. J. and Mcroberts, N. 1999. Sampling winter oilseed rape crops to assess incidence of light leaf spot (Pyrenopeziza brassicae ) in the UK. Protection and Production of Combinable Break Crops. Aspects of Applied Biology 56 . pp. 123-128

Investigating the horizontal spatial spread of light leaf spot (Pyrenopeziza brassicae ) of winter oilseed rape in the UK

C1 - Edited contributions to conferences/learned societies

Evans, N., Fitt, B. D. L., McCartney, H. A., Welham, S. J. and Mcroberts, N. 1999. Investigating the horizontal spatial spread of light leaf spot (Pyrenopeziza brassicae ) of winter oilseed rape in the UK. Information Technology for Crop Protection. Aspects of Applied Biology 55 . pp. 31-36

Conditions for infection of oilseed rape leaves by ascospores of UK (A group) and Polish (B group) Leptosphaeria maculans (stem canker)

G - Articles in popular magazines and other technical publications

Biddulph, J. E., Fitt, B. D. L., Gladders, P., Jedryczka, M., West, J. S. and Welham, S. J. 1999. Conditions for infection of oilseed rape leaves by ascospores of UK (A group) and Polish (B group) Leptosphaeria maculans (stem canker). GCIRC Bulletin. 16, pp. 82-83.

Multi-trait covariance functions to estimate genetic correlations between milk yield, dry matter intake and live weight during lactation

C1 - Edited contributions to conferences/learned societies

Veerkamp, R. F. and Thompson, R. 1999. Multi-trait covariance functions to estimate genetic correlations between milk yield, dry matter intake and live weight during lactation. Metabolic stress in dairy cows. British Society of Animal Science Occasional Publication No. 24 . Cambridge University Press (CUP). https://doi.org/10.1017/S1463981500043168

Response to "Comments on 'Testing winter wheat simulation models predictions against observed UK grain yields by Landau et al [Agric. For. Meteorol. 89 (1998) 85-89]' by Jamieson et al. [Agric. For. Meteorol., this issue]"

A - Papers appearing in refereed journals

Landau, S., Mitchell, R. A. C., Barnett, V., Colls, J. J., Craigon, J. and Payne, R. W. 1999. Response to "Comments on 'Testing winter wheat simulation models predictions against observed UK grain yields by Landau et al [Agric. For. Meteorol. 89 (1998) 85-89]' by Jamieson et al. [Agric. For. Meteorol., this issue]". Agricultural and Forest Meteorology. 96 (1-3), pp. 163-164. https://doi.org/10.1016/S0168-1923(99)00061-1

A covariance function for feed intake, live weight and milk yield estimated using a random regression model

A - Papers appearing in refereed journals

Veerkamp, R. F. and Thompson, R. 1999. A covariance function for feed intake, live weight and milk yield estimated using a random regression model. Journal of Dairy Science. 82 (7), pp. 1565-1573. https://doi.org/10.3168/jds.S0022-0302(99)75384-1

Design keys, pseudo-factors and general balance

A - Papers appearing in refereed journals

Payne, R. W. 1999. Design keys, pseudo-factors and general balance. Computational Statistics & Data Analysis. 29 (2), pp. 217-229. https://doi.org/10.1016/S0167-9473(98)00061-9

Reduced alarm response by peach-potato aphids, Myzus persicae (Hemiptera: Aphididae), with knock-down resistance to insecticides (kdr ) may impose a fitness cost through increased vulnerability to natural enemies

A - Papers appearing in refereed journals

Foster, S. P., Woodcock, C. M., Williamson, M. S., Devonshire, A. L., Denholm, I. and Thompson, R. 1999. Reduced alarm response by peach-potato aphids, Myzus persicae (Hemiptera: Aphididae), with knock-down resistance to insecticides (kdr ) may impose a fitness cost through increased vulnerability to natural enemies. Bulletin of Entomological Research. 89 (2), pp. 133-138. https://doi.org/10.1017/S0007485399000218

Genetic and environmental smoothing of lactation curves with cubic splines

A - Papers appearing in refereed journals

White, I. M. S., Thompson, R. and Brotherstone, S. 1999. Genetic and environmental smoothing of lactation curves with cubic splines. Journal of Dairy Science. 82 (3), pp. 632-638. https://doi.org/10.3168/jds.S0022-0302(99)75277-X

Tiers, structure formulae and the analysis of complicated experiments

A - Papers appearing in refereed journals

Brien, C. J. and Payne, R. W. 1999. Tiers, structure formulae and the analysis of complicated experiments. The Statistician. 48, pp. 41-52.

Prospects for across-flock genetic evaluation in Australian Merino sheep

A - Papers appearing in refereed journals

Atkins, K. D., Gilmour, A. R., Thompson, R., Coelli, K. A. and Casey, A. E. 1998. Prospects for across-flock genetic evaluation in Australian Merino sheep. Wool Technology and Sheep Breeding. 46 (1), pp. 1-11.

APOLYNOMIAL forms the equation for a polynomial contrast fitted by ANOVA

B - Book chapters etc edited externally

Payne, R. W. 1998. APOLYNOMIAL forms the equation for a polynomial contrast fitted by ANOVA. in: Payne, R. W. and Arnold, G. M. (ed.) Genstat 5 Procedure Library Manual Release PL11 Numerical Algorithms Group, Oxford. pp. 52-53

Quasi-Monte Carlo EM algorithm for MLEs in generalized linear mixed models

C1 - Edited contributions to conferences/learned societies

Pan, J-X and Thompson, R. 1998. Quasi-Monte Carlo EM algorithm for MLEs in generalized linear mixed models. Payne, R. W. and Green, P. (ed.) Compstat 1998: Proceedings 13th Symposium in Computational Statistics, Bristol, 1998 . Physica-Verlag, Heidelberg. pp. 419-424 https://doi.org/10.1007/978-3-662-01131-7_58

Empirical models for prediction of regional light leaf spot (Pyrenopeziza brassicae ) incidence on winter oilseed rape in the UK

C2 - Non-edited contributions to conferences

Welham, S. J., Turner, J. A., Fitt, B. D. L., Gladders, P. and Sutherland, K. G. 1998. Empirical models for prediction of regional light leaf spot (Pyrenopeziza brassicae ) incidence on winter oilseed rape in the UK. Abstracts ICPP98 7th International Congress of Plant Pathology, Edinburgh, 9-16 August 1998 . pp. 2.1.9

Development of a system for forecasting severe light leaf spot in winter oilseed rape

C2 - Non-edited contributions to conferences

Sutherland, K. G., Fitt, B. D. L., Gladders, P., Steed, J. M., Turner, J. A. and Welham, S. J. 1998. Development of a system for forecasting severe light leaf spot in winter oilseed rape. Abstracts ICPP98 7th International Congress of Plant Pathology, Edinburgh, 9-16 August 1998 . pp. 3.1.16

Simulation modelling of the progress of light leaf spot on winter oilseed rape (Brassica napus ) in relation to criteria for infection by Pyrenopeziza brassicae

C2 - Non-edited contributions to conferences

Papastamati, K., Welham, S. J., Fitt, B. D. L. and Gladders, P. 1998. Simulation modelling of the progress of light leaf spot on winter oilseed rape (Brassica napus ) in relation to criteria for infection by Pyrenopeziza brassicae. Abstracts ICPP98 7th International Congress of Plant Pathology, Edinburgh, 9-16 August 1998 . pp. 2.1.15

Forecasting and management of light leaf spot and stem canker on winter oilseed rape

C2 - Non-edited contributions to conferences

Fitt, B. D. L., Steed, J. L., Welham, S. J., West, J. S., Gladders, P. and Meakin, P. 1998. Forecasting and management of light leaf spot and stem canker on winter oilseed rape. Abstracts ARIA Meeting, Harpenden, 4 November 1998 .

Effects of temperature and wetness duration on infection of oilseed rape leaves by ascospores of Leptosphaeria maculans (stem canker)

C2 - Non-edited contributions to conferences

Biddulph, J. E., Fitt, B. D. L. and Welham, S. J. 1998. Effects of temperature and wetness duration on infection of oilseed rape leaves by ascospores of Leptosphaeria maculans (stem canker). Abstracts ICPP98 7th International Congress of Plant Pathology, Edinburgh, 9-16 August 1998 . pp. 2.5.13

Multi-trait covariance functions to model genetic variation in the dynamic relation between feed intake, live weight and milk yield during lactation

C2 - Non-edited contributions to conferences

Veerkamp, R. F. and Thompson, R. 1998. Multi-trait covariance functions to model genetic variation in the dynamic relation between feed intake, live weight and milk yield during lactation. Proceedings 49th Annual Meeting of the EAAP, Warsaw, 24-27 August 1998 .

Multi-trait covariance functions to model between animal variation in the dynamic relation between feed intake and milk yield during lactation

C2 - Non-edited contributions to conferences

Veerkamp, R. F., Thompson, R., Meuwissen, T. H. E. and Pool, M. H. 1998. Multi-trait covariance functions to model between animal variation in the dynamic relation between feed intake and milk yield during lactation. Proceedings 5th Zodiac Symposium on Regulation of Feed Intake, Wageningen, 22-24 April 1998 .

(Co)variance structures for linear models in the analysis of plant improvement data

C1 - Edited contributions to conferences/learned societies

Gilmour, A. R., Cullis, B. R., Frensham, A. B. and Thompson, R. 1998. (Co)variance structures for linear models in the analysis of plant improvement data. Payne, R. W. and Green, P. (ed.) Compstat 1998: Proceedings 13th Symposium in Computational Statistics, Bristol, 1998 . Physica-Verlag, Heidelberg. pp. 53-64 https://doi.org/10.1007/978-3-662-01131-7_5

Development and control of light leaf spot (Pyrenopeziza brassicae ) epidemics in winter oilseed rape in the UK

C1 - Edited contributions to conferences/learned societies

Sutherland, K. G., Fitt, B. D. L., Steed, J. M., Welham, S. J., Gladders, P. and Turner, J. A. 1998. Development and control of light leaf spot (Pyrenopeziza brassicae ) epidemics in winter oilseed rape in the UK. Proceedings Brighton Crop Protection Conference - Pests and Diseases, 1998 . pp. 1053-1058

Smoothing biological data with splines

C1 - Edited contributions to conferences/learned societies

White, I. M. S., Cullis, B. R., Gilmour, A. R. and Thompson, R. 1998. Smoothing biological data with splines. Invited Papers 19th International Biometric Conference, Cape Town, 14-18 December 1998 . pp. 57-66

Multiplicative models for interaction in spatial mixed model analyses for Multi-Environment Trial data

C1 - Edited contributions to conferences/learned societies

Smith, A. D., Cullis, B. R., Gilmour, A. R. and Thompson, R. 1998. Multiplicative models for interaction in spatial mixed model analyses for Multi-Environment Trial data. Invited Papers 19th International Biometric Conference, Cape Town, 14-18 December 1998 . pp. 91-101

A data warehouse for designed experiments

C2 - Non-edited contributions to conferences

Payne, R. W., Dhaliwal, J. A. and Dhaliwal, S. S. 1998. A data warehouse for designed experiments. Abstracts New Techniques and Technologies for Statistics Conference . pp. 239

Analysis of the relationship of aeroallergens, air pollution and weather with asthma emergency admissions to a hospital in Mexico City

C2 - Non-edited contributions to conferences

Payne, R. W., McCartney, H. A. and Rosas, I. 1998. Analysis of the relationship of aeroallergens, air pollution and weather with asthma emergency admissions to a hospital in Mexico City. Abstracts 19th International Biometric Conference, Cape Town, 14-18 December 1998 . pp. 239

Effects of light leaf spot (Pyrenopeziza brassicae ) on yield of winter oilseed rape (Brassica napus )

A - Papers appearing in refereed journals

Su, H., Fitt, B. D. L., Welham, S. J., Sansford, C. E. and Sutherland, K. G. 1998. Effects of light leaf spot (Pyrenopeziza brassicae ) on yield of winter oilseed rape (Brassica napus ). Annals of Applied Biology - AAB. 132 (3), pp. 371-386. https://doi.org/10.1111/j.1744-7348.1998.tb05215.x

Epidemiology and forecasting of light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape in the UK

C1 - Edited contributions to conferences/learned societies

Fitt, B. D. L., Gladders, P., Sutherland, K. G., Turner, J. A., Welham, S. J., Biddulph, J. E., Hardwick, N. V. and Wale, S. J. 1998. Epidemiology and forecasting of light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape in the UK.

Spatial analysis of multi-environment early generation variety trials

A - Papers appearing in refereed journals

Cullis, B. R., Gogel, B., Verbyla, A. and Thompson, R. 1998. Spatial analysis of multi-environment early generation variety trials. Biometrics. 54 (1), pp. 1-18. https://doi.org/10.2307/2533991

Estimating yield loss from light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape (Brassica napus ) in the UK

C1 - Edited contributions to conferences/learned societies

Su, H., Sansford, C. E., Fitt, B. D. L., Gladders, P., Lockley, K. D., Sutherland, K. G. and Welham, S. J. 1998. Estimating yield loss from light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape (Brassica napus ) in the UK.

Estimation of genetic parameters using health, fertility and production data from a management recording system for dairy cattle

A - Papers appearing in refereed journals

Pryce, J. E., Esslemont, R. J., Thompson, R., Veerkamp, R. F., Kossaibati, M. A. and Simm, G. 1998. Estimation of genetic parameters using health, fertility and production data from a management recording system for dairy cattle. Animal Science. 66 (3), pp. 577-584. https://doi.org/10.1017/S1357729800009152

Detection of partial aliasing and partial confounding in generally balanced designs

A - Papers appearing in refereed journals

Payne, R. W. 1998. Detection of partial aliasing and partial confounding in generally balanced designs. Computational Statistics. 13, pp. 213-226.

STABLE: a visual environment for the study of multivariate data

C1 - Edited contributions to conferences/learned societies

Payne, R. W. and Harding, S. A. 1998. STABLE: a visual environment for the study of multivariate data. Rizzi, A., Bock, H-H. and Vichi, M. (ed.) Advances in Data Science and Classification: Proceedings 6th Conference of the International Federation of Classification Societies, Rome, 21-24 July 1998 . Springer, New York.

Construction of efficient identification schemes using batches of discrete-valued tests

A - Papers appearing in refereed journals

Payne, R. W. 1998. Construction of efficient identification schemes using batches of discrete-valued tests. Journal Of Classification. 15, pp. 185-197.

Key to species

B - Book chapters etc edited externally

Payne, R. W. 1998. Key to species. in: Kurtzman, C. P. and Fell, J. W. (ed.) The yeasts: a taxonomic study Elsevier, Amsterdam. pp. 891-913

Compstat 1998: Proceedings 13th Symposium in Computational Statistics, Bristol, 1998

E - Books edited/written by staff member, alone/with others

Payne, R. W. Green, P. J. (ed.) 1998. Compstat 1998: Proceedings 13th Symposium in Computational Statistics, Bristol, 1998. Physica-Verlag, Heidelberg.

Candida Berkhout

B - Book chapters etc edited externally

Meyer, S. A., Payne, R. W. and Yarrow, D. 1998. Candida Berkhout. in: Kurtzman, C. P. and Fell, J. W. (ed.) The yeasts: a taxonomic study Elsevier, Amsterdam. pp. 454-573

Use of prior information in forming selection indices

A - Papers appearing in refereed journals

Goddard, M. E. and Thompson, R. 1998. Use of prior information in forming selection indices. Journal of Animal Breeding and Genetics. 115 (5), pp. 327-340. https://doi.org/10.1111/j.1439-0388.1998.tb00354.x

Compstat: Proceedings 13th Symposium in Computational Statistics, Bristol, 1998. Short Communications and Posters

E - Books edited/written by staff member, alone/with others

Payne, R. W. Lane, P. W. (ed.) 1998. Compstat: Proceedings 13th Symposium in Computational Statistics, Bristol, 1998. Short Communications and Posters. IACR Rothamsted Experimental Station, Harpenden.

Across-flock evaluation and optimisation of pedigree recording for merino sheep

C1 - Edited contributions to conferences/learned societies

Atkins, K. D., Gilmour, A. R., Thompson, R. and Coelli, K. A. 1998. Across-flock evaluation and optimisation of pedigree recording for merino sheep. Proceedings 6th World Congress on Genetics Applied to Livestock Production, Armidale, Australia, 11-16 January 1998 .

Testing winter wheat models' predictions against observed UK grain yields

A - Papers appearing in refereed journals

Landau, S., Mitchell, R. A. C., Barnett, V., Colls, J. J., Craigon, J., Moore, K. L. and Payne, R. W. 1998. Testing winter wheat models' predictions against observed UK grain yields. Agricultural and Forest Meteorology. 89 (2), pp. 85-99. https://doi.org/10.1016/S0168-1923(97)00069-5

Reformulated generalised linear (mixed) model aids multiple trait genetic evaluation with polychotomous calving ease

C1 - Edited contributions to conferences/learned societies

Gilmour, A. R. and Thompson, R. 1998. Reformulated generalised linear (mixed) model aids multiple trait genetic evaluation with polychotomous calving ease. Proceedings 6th World Congress on Genetics Applied to Livestock Production, Armidale, Australia, 11-16 January 1998 .

Modelling variance parameters in ASREML for repeated measures data

C1 - Edited contributions to conferences/learned societies

Gilmour, A. R. and Thompson, R. 1998. Modelling variance parameters in ASREML for repeated measures data. Proceedings 6th World Congress on Genetics Applied to Livestock Production, Armidale, Australia, 11-16 January 1998 .

Genetic parameters for live animal conformation measures of British pedigree beef cattle

C1 - Edited contributions to conferences/learned societies

Crump, R. E., Simm, G. and Thompson, R. 1998. Genetic parameters for live animal conformation measures of British pedigree beef cattle. Proceedings 6th World Congress on Genetics Applied to Livestock Production, Armidale, Australia, 11-16 January 1998 .

Analysis of the relationships between environmental factors (aeroallergens air pollution and weather) and asthma emergency admissions to a hospital in Mexico City

A - Papers appearing in refereed journals

Rosas, I., McCartney, H. A., Payne, R. W., Calderon, C., Lacey, J., Chapela, R. and Ruiz-Velazco, S. 1998. Analysis of the relationships between environmental factors (aeroallergens air pollution and weather) and asthma emergency admissions to a hospital in Mexico City. Allergy. 53 (4), pp. 394-401. https://doi.org/10.1111/j.1398-9995.1998.tb03911.x

Genstat 5 Release 4.1 reference manual supplement

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Gilmour, A. R., Harding, S. A., Morgan, G. W., Murray, D. A., Thompson, R., Todd, A. D., Tunnicliffe Wilson, G., Webster, R. and Welham, S. J. 1997. Genstat 5 Release 4.1 reference manual supplement. Numerical Algorithms Group, Oxford.

Genstat for Windows command language manual

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Gilmour, A. R., Harding, S. A., Morgan, G. W., Murray, D. A., Thompson, R., Todd, A. D., Tunnicliffe Wilson, G., Webster, R. and Welham, S. J. 1997. Genstat for Windows command language manual. Numerical Algorithms Group, Oxford.

Procedure AGBIB

B - Book chapters etc edited externally

Payne, R. W. 1997. Procedure AGBIB. in: Payne, R. W., Arnold, G. M. and Morgan, G. W. (ed.) Genstat 5 Procedure Library Manual Release PL10 Numerical Algorithms Group, Oxford. pp. 13-15

Identification of yeasts through computer-based systems

B - Book chapters etc edited externally

Payne, R. W. 1997. Identification of yeasts through computer-based systems. in: Morse, D. R., Scott, P. R., Jeffries, P. and Bridge, P. D. (ed.) Information technology, plant pathology and biodiversity CABI International, Wallingford, Oxon (CABI). pp. 333-346

An introductory course for Genstat 5 Release 4

E - Books edited/written by staff member, alone/with others

Lane, P. W. and Payne, R. W. 1997. An introductory course for Genstat 5 Release 4. Numerical Algorithms Group, Oxford.

Genetic aspects of common health disorders and measures of fertility in Holstein Friesian dairy cattle

A - Papers appearing in refereed journals

Pryce, J. E., Veerkamp, R. F., Thompson, R., Hill, W. G. and Simm, G. 1997. Genetic aspects of common health disorders and measures of fertility in Holstein Friesian dairy cattle. Animal Science. 65 (3), pp. 353-360. https://doi.org/10.1017/S1357729800008559

The description of experimental designs in information systems

A - Papers appearing in refereed journals

Payne, R. W., Potts, J. M. and Verrier, P. J. 1997. The description of experimental designs in information systems. Computers and Electronics in Agriculture. 19 (1), pp. 69-86. https://doi.org/10.1016/S0168-1699(97)00036-7

Effects of planting mixtures of different sizes of potato seed tubers on the yield and size of tubers

A - Papers appearing in refereed journals

Hide, G. A., Welham, S. J., Read, P. J. and Ainsley, A. E. 1997. Effects of planting mixtures of different sizes of potato seed tubers on the yield and size of tubers. The Journal of Agricultural Science. 128 (2), pp. 173-180. https://doi.org/10.1017/S0021859696004017

Predicting wheat yields: the search for valid and precise models

C1 - Edited contributions to conferences/learned societies

Barnett, V., Landau, S., Colls, J. J., Craigon, J., Mitchell, R. A. C. and Payne, R. W. 1997. Predicting wheat yields: the search for valid and precise models. Lake, J. V., Goode, J. A. and Bock, G. R. (ed.) Precision Agriculture: Spatial and Temporal Variability (Ciba Foundation Symposium 210) . John Wiley & Sons Chichester, West Sussex. pp. 79-99

Genstat 5 Release 4.1 reference summary

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Gilmour, A. R., Harding, S. A., Morgan, G. W., Murray, D. A., Thompson, R., Todd, A. D., Tunnicliffe Wilson, G., Webster, R. and Welham, S. J. 1997. Genstat 5 Release 4.1 reference summary. Numerical Algorithms Group, Oxford.

A population genetics model of marker-assisted selection

A - Papers appearing in refereed journals

Luo, Z. W., Thompson, R. and Woolliams, J. A. 1997. A population genetics model of marker-assisted selection. Genetics. 146 (3), pp. 1173-1183.

A genetic analysis of egg quality traits and their maternal influence on offspring-parental regressions of juvenile body weight performance in broiler chickens

A - Papers appearing in refereed journals

Koerhuis, A. N. M., Mckay, J. C., Hill, W. G. and Thompson, R. 1997. A genetic analysis of egg quality traits and their maternal influence on offspring-parental regressions of juvenile body weight performance in broiler chickens. Livestock Production Science. 49 (3), pp. 203-215. https://doi.org/10.1016/S0301-6226(97)00002-X

Multivariate analysis of test day milk yields of British Holstein- Freisian heifers using Gibbs sampling

A - Papers appearing in refereed journals

Firat, M. Z., Theobald, C. M. and Thompson, R. 1997. Multivariate analysis of test day milk yields of British Holstein- Freisian heifers using Gibbs sampling. Acta Agriculturae Scandinavica Section A-Animal Science. 47 (4), pp. 221-229. https://doi.org/10.1080/09064709709362390

Univariate analysis of test day milk yields of British Holstein - Friesian heifers using Gibbs sampling

A - Papers appearing in refereed journals

Firat, M. Z., Theobald, C. M. and Thompson, R. 1997. Univariate analysis of test day milk yields of British Holstein - Friesian heifers using Gibbs sampling. Acta Agriculturae Scandinavica Section A-Animal Science. 47 (4), pp. 213-220. https://doi.org/10.1080/09064709709362389

Individual animal model estimates of genetic correlations between performance test and reproduction traits of Landrace pigs performance tested in a commercial nucleus herd

A - Papers appearing in refereed journals

Crump, R. E., Thompson, R., Haley, C. S. and Mercer, J. 1997. Individual animal model estimates of genetic correlations between performance test and reproduction traits of Landrace pigs performance tested in a commercial nucleus herd. Animal Science. 65 (2), pp. 291-298. https://doi.org/10.1017/S135772980001660X

Individual animal model estimates of genetic parameters for reproduction traits of Landrace pigs performance tested in a commercial nucleus herd

A - Papers appearing in refereed journals

Crump, R. E., Haley, C. S., Thompson, R. and Mercer, J. 1997. Individual animal model estimates of genetic parameters for reproduction traits of Landrace pigs performance tested in a commercial nucleus herd. Animal Science. 65 (2), pp. 285-290. https://doi.org/10.1017/S1357729800016593

Individual animal model estimates of genetic parameters for performance test traits of male and female Landrace pigs tested in a commercial nucleus herd

A - Papers appearing in refereed journals

Crump, R. E., Haley, C. S., Thompson, R. and Mercer, J. 1997. Individual animal model estimates of genetic parameters for performance test traits of male and female Landrace pigs tested in a commercial nucleus herd. Animal Science. 65 (2), pp. 275-283. https://doi.org/10.1017/S1357729800016581

Results of multivariate individual animal model genetic evaluations of British pedigree beef cattle

A - Papers appearing in refereed journals

Crump, R. E., Simm, G., Nicholson, D., Findlay, R. H., Bryan, J. G. E. and Thompson, R. 1997. Results of multivariate individual animal model genetic evaluations of British pedigree beef cattle. Animal Science. 65 (2), pp. 199-207. https://doi.org/10.1017/S1357729800016507

Assigning pedigree beef performance records to contemporary groups taking account of within herd calving patterns

A - Papers appearing in refereed journals

Crump, R. E., Wray, N. R., Thompson, R. and Simm, G. R. 1997. Assigning pedigree beef performance records to contemporary groups taking account of within herd calving patterns. Animal Science. 65 (2), pp. 193-198. https://doi.org/10.1017/S1357729800016490

Optimal weighting of information in marker-assisted selection

A - Papers appearing in refereed journals

Whittaker, J. C., Haley, C. S. and Thompson, R. 1997. Optimal weighting of information in marker-assisted selection. Genetics Research. 69 (2), pp. 137-144. https://doi.org/10.1017/S0016672397002711

The entry, description and extraction of data by accessing the ERA database from the world wide web

C1 - Edited contributions to conferences/learned societies

Potts, J. M., Verrier, P. J. and Payne, R. W. 1997. The entry, description and extraction of data by accessing the ERA database from the world wide web. Kure, H., Kristensen, A. R. and Thysen, I. (ed.) Proceedings First European Conference for Information Technology in Agriculture, Copenhagen, 15-18 June 1997 . pp. 101-104

Inversion of matrices with contents subject to modulo arithmetic

A - Papers appearing in refereed journals

Payne, R. W. 1997. Inversion of matrices with contents subject to modulo arithmetic. Applied Statistics. 46 (2), pp. 295-298.

Genstat for windows - an introductory course

E - Books edited/written by staff member, alone/with others

Lane, P. W. and Payne, R. W. 1997. Genstat for windows - an introductory course. Numerical Algorithms Group, Oxford.

Models to estimate maternal effects for juvenile body weight in broiler chickens

A - Papers appearing in refereed journals

Koerhuis, A. N. M. and Thompson, R. 1997. Models to estimate maternal effects for juvenile body weight in broiler chickens. Genetics Selection Evolution. 29, pp. 225-249. https://doi.org/10.1186/1297-9686-29-2-225

Effects of temperature, cultivar and isolate on the incubation period of white leaf spot (Mycosphaerella capsellae ) on oilseed rape (Brassica napus )

A - Papers appearing in refereed journals

Inman, A. J., Fitt, B. D. L., Welham, S. J., Evans, R. L. and Murray, D. A. 1997. Effects of temperature, cultivar and isolate on the incubation period of white leaf spot (Mycosphaerella capsellae ) on oilseed rape (Brassica napus ). Annals of Applied Biology - AAB. 130, pp. 239-253.

Estimating yield loss from light leaf spot (Pyrenopeziza brassica ) on winter oilseed rape

G - Articles in popular magazines and other technical publications

Su, H., Fitt, B. D. L., Gladders, P., Hardwick, N. V., Lockley, K. D., Sansford, C. E., Sutherland, K. G. and Welham, S. J. 1997. Estimating yield loss from light leaf spot (Pyrenopeziza brassica ) on winter oilseed rape. GCIRC Bulletin. 13, pp. 75-78.

Predicting severe light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape in the U.K.

G - Articles in popular magazines and other technical publications

Fitt, B. D. L., Gladders, P., Turner, J. R., Sutherland, K. G. and Welham, S. J. 1997. Predicting severe light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape in the U.K. GCIRC Bulletin. 13, pp. 72-74.

Likelihood ratio tests for fixed model terms using residual maximum likelihood

A - Papers appearing in refereed journals

Welham, S. J. and Thompson, R. 1997. Likelihood ratio tests for fixed model terms using residual maximum likelihood. Journal of the Royal Statistical Society, Series B (Statistical Methodology). 59 (3), pp. 701-714. https://doi.org/10.1111/1467-9868.00092

Gibbs sampling, adaptive rejection sampling and robustness to prior specification for a mixed linear model

A - Papers appearing in refereed journals

Theobald, C. M., Firat, M. Z. and Thompson, R. 1997. Gibbs sampling, adaptive rejection sampling and robustness to prior specification for a mixed linear model. Genetics Selection Evolution. 29 (1), pp. 57-72. https://doi.org/10.1186/1297-9686-29-1-57

Residual maximum likelihood estimation of (Co) variance components in multivariate mixed linear models using average information

A - Papers appearing in refereed journals

Jensen, J., Mantysaari, E. A., Madsen, P. and Thompson, R. 1997. Residual maximum likelihood estimation of (Co) variance components in multivariate mixed linear models using average information. Journal of the Indian Society of Agricultural Statistics. 49, pp. 215-236.

Comparative performance of British hill sheep breeds and crosses

A - Papers appearing in refereed journals

Al-Nakib, F. M. S., Bateman, N., Findlay, R. H., Smith, C. and Thompson, R. 1997. Comparative performance of British hill sheep breeds and crosses. The Journal of Agricultural Science. 128 (2), pp. 199-206. https://doi.org/10.1017/S0021859696003991

Prospects for developing a forecasting scheme to optimise use of fungicides for disease control on winter oilseed rape in the UK

C1 - Edited contributions to conferences/learned societies

Fitt, B. D. L., Gladders, P., Turner, J. A., Sutherland, K. G., Welham, S. J. and Davies, J. M. L. 1997. Prospects for developing a forecasting scheme to optimise use of fungicides for disease control on winter oilseed rape in the UK. Optimising Pesticide Applications. Aspects of Applied Biology 48 . pp. 135-142

The construction of efficient identification schemes for use in agriculture and biotechnology

C2 - Non-edited contributions to conferences

Payne, R. W. 1996. The construction of efficient identification schemes for use in agriculture and biotechnology. Statistical Methods in Ecology and Adding Value in Agriculture through Quantitative Methods: Proceedings V EU HARMA Concerted Action Workshop, Bari, 23-24 February 1996 . pp. 79-89

Genstat 5 Release 3.2 Command Language Manual

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Harding, S. A., Murray, D. A., Morgan, G. W., Todd, A. D., Thompson, R., Tunnicliffe Wilson, G., Webster, R. J., Welham, S. J. and White, Robin P. 1996. Genstat 5 Release 3.2 Command Language Manual. Numerical Algorithms Group, Oxford.

Information systems for long-term storage of data from experiments

C2 - Non-edited contributions to conferences

Payne, R. W. 1996. Information systems for long-term storage of data from experiments. Thomas, E. and Richter, C. (ed.) HARMA Concerted Action, Proceedings of the VI HARMA Workshop, Berlin, 20-21 September 1996 . pp. 4-16

Asthma episodes in Mexico City: an analysis of relationships between asthma, pollution, weather and aeroallergens

C2 - Non-edited contributions to conferences

McCartney, H. A., Payne, R. W. and Rosas, I. 1996. Asthma episodes in Mexico City: an analysis of relationships between asthma, pollution, weather and aeroallergens. Abstracts British Society for Allergy and Clinical Immunology Annual Meeting, Manchester, 4-6 September 1996 . pp. 6

Designing experiments to examine competition effects between neighbouring plants in mixed populations

C1 - Edited contributions to conferences/learned societies

Welham, S. J., Bailey, R. A., Ainsley, A. E. and Hide, G. A. 1996. Designing experiments to examine competition effects between neighbouring plants in mixed populations. Proceedings XVIIIth International Biometric Conference, 1996 . pp. 97-105

Limousin national sire and dam summary

D1 - Technical reports: non-confidential

Bridge, P., Brown, C. M., Guy, D. R., Weigleb, B., Crump, R. E., Simm, G., Findlay, R. M., Nicholson, P. and Thompson, R. 1996. Limousin national sire and dam summary. Signet, Milton Keynes.

Charolais national sire and dam summary

D1 - Technical reports: non-confidential

Bridge, P., Brown, C. M., Guy, D. R., Weigleb, B., Crump, R. E., Simm, G., Findlay, R. M., Nicholson, P. and Thompson, R. 1996. Charolais national sire and dam summary. Signet, Milton Keynes.

Blonde d'Aquitane national sire and dam summary

D1 - Technical reports: non-confidential

Bridge, P., Brown, C. M., Guy, D. R., Weigleb, B., Crump, R. E., Simm, G., Findlay, R. M., Nicholson, P. and Thompson, R. 1996. Blonde d'Aquitane national sire and dam summary. Signet, Milton Keynes.

Aberdeen Angus national sire and dam summary

D1 - Technical reports: non-confidential

Bridge, P., Brown, C. M., Guy, D. R., Weigleb, B., Crump, R. E., Simm, G., Findlay, R. M., Nicholson, P. and Thompson, R. 1996. Aberdeen Angus national sire and dam summary. Signet, Milton Keynes.

On the mapping of QTL by regression of phenotype on marker-type

A - Papers appearing in refereed journals

Whittaker, J. C., Thompson, R. and Visscher, P. M. 1996. On the mapping of QTL by regression of phenotype on marker-type. Heredity. 77, pp. 23-32. https://doi.org/10.1038/hdy.1996.104

Confidence intervals in QTL mapping by bootstrapping

A - Papers appearing in refereed journals

Visscher, P. M., Thompson, R. and Haley, C. S. 1996. Confidence intervals in QTL mapping by bootstrapping. Genetics. 143 (2), pp. 1013-1020.

Marker-assisted introgression in backcross breeding programs

A - Papers appearing in refereed journals

Visscher, P. M., Haley, C. S. and Thompson, R. 1996. Marker-assisted introgression in backcross breeding programs. Genetics. 144 (4), pp. 1923-1932.

Analysis of cereal variety trials

C1 - Edited contributions to conferences/learned societies

Thompson, R. 1996. Analysis of cereal variety trials. Williams, D. and Connolly, J. (ed.) Proceedings 7th HARMA Workshop, Dublin, 8 November 1996 . pp. 7-10

Model building in animal breeding

C1 - Edited contributions to conferences/learned societies

Thompson, R. and Crump, R. E. 1996. Model building in animal breeding. Stein, A., Schotman, P. J. and Penningdevries, F. W. T. (ed.) Models in action (Quantitative approaches in systems analysis no. 6) . AB-DLO Research Institute for Agrobiology and Soil Fertility (AB-DLO) Wageningen. pp. 17-21

Agricultural experiments

B - Book chapters etc edited externally

Payne, R. W. 1996. Agricultural experiments. in: Greenfield, T. (ed.) Research methods: guidance for postgraduates Arnold, London. pp. 107-114

Analysis of repeated measurements in Genstat. Course held at the Waite Institute, Adelaide, 3 December 1996

D1 - Technical reports: non-confidential

Payne, R. W. 1996. Analysis of repeated measurements in Genstat. Course held at the Waite Institute, Adelaide, 3 December 1996.

New design facilities to confound the unimportant and avoid unbalancing your neighbours

C2 - Non-edited contributions to conferences

Payne, R. W. 1996. New design facilities to confound the unimportant and avoid unbalancing your neighbours. Abstracts 4th Australasian Genstat Conference, Adelaide, 4-6 December 1996 . pp. 14

The description of experimental designs in information systems.

C1 - Edited contributions to conferences/learned societies

Payne, R. W. 1996. The description of experimental designs in information systems. Lokhorst, C., Dijkhuizen, A. A. and Udinktencate, A. J. (ed.) Information and Communication Technology Applications in Agriculture: the State of the Art and Future Perspectives. Proceedings 6th International Congress for Computer Technology in Agriculture (ICCTA'96), Wageningen, 16-19 July 1996 . pp. 249-254

An extendable system for the selection, construction and analysis of generally balanced designs

C1 - Edited contributions to conferences/learned societies

Payne, R. W. 1996. An extendable system for the selection, construction and analysis of generally balanced designs. Design of Experiments and Statistical Education in Agriculture. Proceedings 3rd HARMA Workshop, Cordoba, November 1994 . pp. 126-136

Book review: D. L. Hawksworth, ed., Prospects in systematics. The Systematics Association Special Volume 36, Oxford: Clarendon Press, 1988

G - Articles in popular magazines and other technical publications

Payne, R. W. 1996. Book review: D. L. Hawksworth, ed., Prospects in systematics. The Systematics Association Special Volume 36, Oxford: Clarendon Press, 1988. Journal Of Classification. 36, pp. 347-349.

Investigation of bimodality in likelihoods and posterior densities

A - Papers appearing in refereed journals

Firat, M. Z. and Thompson, R. 1996. Investigation of bimodality in likelihoods and posterior densities. Journal of Statistical Computation and Simulation. 54 (4), pp. 379-386. https://doi.org/10.1080/00949659608811741

The analysis of the NSW wheat variety database. II. Variance component estimation

A - Papers appearing in refereed journals

Cullis, B. R., Thomson, F. M., Fisher, J. A., Gilmour, A. R. and Thompson, R. 1996. The analysis of the NSW wheat variety database. II. Variance component estimation. Theoretical and Applied Genetics. 92 (1), pp. 28-39. https://doi.org/10.1007/BF00222948

The analysis of the NSW wheat variety database. I. Modelling trial error variance

A - Papers appearing in refereed journals

Cullis, B. R., Thomson, F. M., Fisher, J. A., Gilmour, A. R. and Thompson, R. 1996. The analysis of the NSW wheat variety database. I. Modelling trial error variance. Theoretical and Applied Genetics. 92 (1), pp. 21-27. https://doi.org/10.1007/BF00222947

Tiers, structure formulae and the analysis of complicated experiments

C2 - Non-edited contributions to conferences

Brien, C. and Payne, R. W. 1996. Tiers, structure formulae and the analysis of complicated experiments. Abstracts 4th Australasian Genstat Conference, Adelaide, 4-6 December 1996 . Wiley. pp. 15 https://doi.org/10.1111/1467-9884.00169

Predicting risk of severe light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape in the UK

C1 - Edited contributions to conferences/learned societies

Fitt, B. D. L., Gladders, P., Turner, J. A., Sutherland, K. G. and Welham, S. J. 1996. Predicting risk of severe light leaf spot (Pyrenopeziza brassicae ) on winter oilseed rape in the UK. Proceedings Brighton Crop Protection Conference - Pests and Diseases, 1996 . pp. 239-244

The yield of potato plants as affected by stem canker (Rhizoctonia solani ), blackleg (Erwinia carotovora subsp. atroseptica ) and by neighbouring plants

A - Papers appearing in refereed journals

Hide, G. A., Welham, S. J., Read, P. J. and Ainsley, A. E. 1996. The yield of potato plants as affected by stem canker (Rhizoctonia solani ), blackleg (Erwinia carotovora subsp. atroseptica ) and by neighbouring plants. The Journal of Agricultural Science. 126 (4), pp. 429-440. https://doi.org/10.1017/S0021859600075511

An overview of spatial analysis in Genstat

C2 - Non-edited contributions to conferences

Payne, R. W., Webster, R. and Mugglestone, M. A. 1996. An overview of spatial analysis in Genstat. Abstracts 4th Australasian Genstat Conference, Adelaide, 4-6 December 1996 . pp. 27

Effects of wetness period and temperature on development of dark pod spot (Alternaria brassicae ) on oilseed rape (Brassica napus )

A - Papers appearing in refereed journals

Hong, C. X., Fitt, B. D. L. and Welham, S. J. 1996. Effects of wetness period and temperature on development of dark pod spot (Alternaria brassicae ) on oilseed rape (Brassica napus ). Plant Pathology. 45 (6), pp. 1077-1089. https://doi.org/10.1046/j.1365-3059.1996.d01-193.x

The Electronic Rothamsted Archive and its use in agricultural research

C1 - Edited contributions to conferences/learned societies

Potts, J. M., Verrier, P. J. and Payne, R. W. 1996. The Electronic Rothamsted Archive and its use in agricultural research. Lokhorst, C., Dijkhuizen, A. A. and Udinktencate, A. J. (ed.) Information and Communication Technology Applications in Agriculture: the State of the Art and Future Perspectives. Proceedings 6th International Congress for Computer Technology in Agriculture (ICCTA'96), Wageningen, 16-19 July 1996 . pp. 171-176

Genstat for Windows: an introductory course, 2nd ed.

E - Books edited/written by staff member, alone/with others

Lane, P. W. and Payne, R. W. 1996. Genstat for Windows: an introductory course, 2nd ed. Numerical Algorithms Group, Oxford.

Genstat 3[3] Procedure Library

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1996. Genstat 3[3] Procedure Library. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3.2 version for PC Windows and DOS

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1996. Genstat 5 Release 3.2 version for PC Windows and DOS. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3.2 version for Vax VMS

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1996. Genstat 5 Release 3.2 version for Vax VMS. Numerical Algorithms Group, Oxford.

Genstat for Windows: an introductory course

E - Books edited/written by staff member, alone/with others

Lane, P. W. and Payne, R. W. 1996. Genstat for Windows: an introductory course. Numerical Algorithms Group, Oxford.

Genstat 5 for Windows reference manual supplement

D1 - Technical reports: non-confidential

Payne, R. W., Lane, P. W., Baird, D. B., Gilmour, A. R., Harding, S. A., Morgan, G. W., Murray, D. A., Thompson, R., Todd, A. D., Tunnicliffe Wilson, G., Webster, R. and Welham, S. J. 1995. Genstat 5 for Windows reference manual supplement. Oxford Numerical Algorithms Group.

Genstat 3[2] Procedure Library

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1995. Genstat 3[2] Procedure Library. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3.1 version for Hewlatt Packard 9000 Series 700

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1995. Genstat 5 Release 3.1 version for Hewlatt Packard 9000 Series 700. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3.1 version for Dec Alpha AXP OSF/1

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1995. Genstat 5 Release 3.1 version for Dec Alpha AXP OSF/1. Numerical Algorithms Group, Oxford.

Genstat for Windows. Release 3.2 manual supplement

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Harding, S. A., Murray, D. A., Morgan, G. W., Todd, A. D., Thompson, R., Tunnicliffe Wilson, G., Webster, R., Welham, S. J. and White, Robin P. 1995. Genstat for Windows. Release 3.2 manual supplement. Numerical Algorithms Group, Oxford.

Genstat for Windows reference summary

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Harding, S. A., Murray, D. A., Morgan, G. W., Todd, A. D., Thompson, R., Tunnicliffe Wilson, G., Webster, R., Welham, S. J. and White, Robin P. 1995. Genstat for Windows reference summary. Numerical Algorithms Group, Oxford.

Agricultural sustainabilty: economic, environmental and statistical considerations

E - Books edited/written by staff member, alone/with others

Barnett, V. and Payne, R. W. Steiner, R. (ed.) 1995. Agricultural sustainabilty: economic, environmental and statistical considerations. John Wiley & Sons Chichester, West Sussex.

Use of the most probable number technique to quantify soil-borne plant pathogens

A - Papers appearing in refereed journals

Adams, M. J. and Welham, S. J. 1995. Use of the most probable number technique to quantify soil-borne plant pathogens. Annals of Applied Biology - AAB. 126 (1), pp. 181-196. https://doi.org/10.1111/j.1744-7348.1995.tb05014.x

A case study in measurement and analysis of disease gradients

C1 - Edited contributions to conferences/learned societies

Welham, S. J., McCartney, H. A. and Fitt, B. D. L. 1995. A case study in measurement and analysis of disease gradients. Field Experimental Techniques. Aspects of Applied Biology %B43 $B. pp. 77-85

Economic and statistical considerations in the measurement of total factor productivity (TFP)

B - Book chapters etc edited externally

Rayner, A. I. and Welham, S. J. 1995. Economic and statistical considerations in the measurement of total factor productivity (TFP). in: Payne, R. W., Steiner, R. and Barnett, V. (ed.) Agricultural sustainability: economic, environmental and statistical considerations John Wiley & Sons Chichester, West Sussex. pp. 23-38

Procedure FRESTRICTEDSET

B - Book chapters etc edited externally

Payne, R. W. 1995. Procedure FRESTRICTEDSET. in: Payne, R. W. and Arnold, G. M. (ed.) Genstat 5 Procedure Library Manual Release 3[3] Numerical Algorithms Group, Oxford. pp. 179-180

Programming in Genstat. Course at Pfizer Central Research, 14 November 1995

D1 - Technical reports: non-confidential

Payne, R. W. and Harding, S. A. 1995. Programming in Genstat. Course at Pfizer Central Research, 14 November 1995.

Procedure AFORMS

B - Book chapters etc edited externally

Payne, R. W. 1995. Procedure AFORMS. in: Payne, R. W. and Arnold, G. M. (ed.) Genstat 5 Procedure Library Manual Release 3[3] Numerical Algorithms Group, Oxford. pp. 10-11

Linear modelling in Genstat. Workshop at Liverpool John Moores University

D1 - Technical reports: non-confidential

Payne, R. W. and Lane, P. W. 1995. Linear modelling in Genstat. Workshop at Liverpool John Moores University.

Procedure JACKKNIFE

B - Book chapters etc edited externally

Payne, R. W. 1995. Procedure JACKKNIFE. in: Payne, R. W. and Arnold, G. M. (ed.) Genstat 5 Procedure Library Manual Release 3[3] Numerical Algorithms Group, Oxford. pp. 224-226

Procedure RPROPORTIONAL

B - Book chapters etc edited externally

Payne, R. W. 1995. Procedure RPROPORTIONAL. in: Payne, R. W. and Arnold, G. M. (ed.) Genstat 5 Procedure Library Manual Release 3[3] Numerical Algorithms Group, Oxford. pp. 325-327

Procedure RSURVIVAL

B - Book chapters etc edited externally

Payne, R. W. 1995. Procedure RSURVIVAL. in: Payne, R. W. and Arnold, G. M. (ed.) Genstat 5 Procedure Library Manual Release 3[3] Numerical Algorithms Group, Oxford. pp. 328-329

Genstat 5 release 3.2 reference summary

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Harding, S. A., Murray, D. A., Morgan, G. W., Todd, A. D., Thompson, R., Tunnicliffe Wilson, G., Webster, R., Welham, S. J. and White, Robin P. 1995. Genstat 5 release 3.2 reference summary. Oxford Numerical Algorithms Group.

Genstat 5 release 3.2 manual supplement

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Harding, S. A., Murray, D. A., Morgan, G. W., Todd, A. D., Thompson, R., Tunnicliffe Wilson, G., Webster, R., Welham, S. J. and White, Robin P. 1995. Genstat 5 release 3.2 manual supplement. Numerical Algorithms Group, Oxford.

Procedure FLIBHELP

B - Book chapters etc edited externally

Payne, R. W. 1995. Procedure FLIBHELP. in: Payne, R. W. and Arnold, G. M. (ed.) Genstat 5 Procedure Library Manual Release 3[3] Numerical Algorithms Group, Oxford. pp. 177-178

Procedure AREPMEASURES

B - Book chapters etc edited externally

Payne, R. W. 1995. Procedure AREPMEASURES. in: Payne, R. W. and Arnold, G. M. (ed.) Genstat 5 Procedure Library Manual Release 3[3] Numerical Algorithms Group, Oxford. pp. 58-61

Procedure ARANDOMIZE

B - Book chapters etc edited externally

Payne, R. W. 1995. Procedure ARANDOMIZE. in: Payne, R. W. and Arnold, G. M. (ed.) Genstat 5 Procedure Library Manual Release 3[3] Numerical Algorithms Group, Oxford. pp. 56-57

Procedure APRODUCT

B - Book chapters etc edited externally

Payne, R. W. 1995. Procedure APRODUCT. in: Payne, R. W. and Arnold, G. M. (ed.) Genstat 5 Procedure Library Manual Release 3[3] Numerical Algorithms Group, Oxford. pp. 54-55

Procedure APPEND

B - Book chapters etc edited externally

Payne, R. W. 1995. Procedure APPEND. in: Payne, R. W. and Arnold, G. M. (ed.) Genstat 5 Procedure Library Manual Release 3[3] Numerical Algorithms Group, Oxford. pp. 52-53

Procedure AMERGE

B - Book chapters etc edited externally

Payne, R. W. 1995. Procedure AMERGE. in: Payne, R. W. and Arnold, G. M. (ed.) Genstat 5 Procedure Library Manual Release 3[3] Numerical Algorithms Group, Oxford. pp. 40-41

Procedure AGRAPH

B - Book chapters etc edited externally

Payne, R. W. 1995. Procedure AGRAPH. in: Payne, R. W. and Arnold, G. M. (ed.) Genstat 5 Procedure Library Manual Release 3[3] Numerical Algorithms Group, Oxford. pp. 30-31

Design and analysis of experiments in Genstat. Course at Pfizer Central Research, 24-25 April 1995

D1 - Technical reports: non-confidential

Payne, R. W. and Welham, S. J. 1995. Design and analysis of experiments in Genstat. Course at Pfizer Central Research, 24-25 April 1995.

Use of splines in extending random coefficient regression models for the analysis of repeated measurements

C1 - Edited contributions to conferences/learned societies

Kenward, M. G. and Welham, S. J. 1995. Use of splines in extending random coefficient regression models for the analysis of repeated measurements. Proceedings Symposium on Statistical Software 1995, Utrecht, 9 November 1995 .

The influence of planting seed tubers with gangrene (Phoma foveata ) and of neighbouring healthy, diseased and missing plants on the yield and size of potatoes

A - Papers appearing in refereed journals

Hide, G. A., Welham, S. J., Read, P. J. and Ainsley, A. E. 1995. The influence of planting seed tubers with gangrene (Phoma foveata ) and of neighbouring healthy, diseased and missing plants on the yield and size of potatoes. The Journal of Agricultural Science. 125 (1), pp. 51-60. https://doi.org/10.1017/S0021859600074499

The Genstat TWOD Procedure

J - Computer programs

Gilmour, A. R., Harding, S. A. and Welham, S. J. 1995. The Genstat TWOD Procedure.

Efficient analysis of field experiments using two-dimensional spatial models

G - Articles in popular magazines and other technical publications

Gilmour, A., Welham, S. J. and Harding, S. A. 1995. Efficient analysis of field experiments using two-dimensional spatial models. Genstat newsletter. 32, pp. 31-39.

Genstat 5 procedure library manual release 3[3]

E - Books edited/written by staff member, alone/with others

Payne, R. W. Arnold, G. M. (ed.) 1995. Genstat 5 procedure library manual release 3[3]. Numerical Algorithms Group, Oxford.

Early development of light leaf spot (Pyrenopeziza brassicae) on winter oilseed rape (Brassica napus) in relation to temperature and leaf wetness

A - Papers appearing in refereed journals

Figueroa, L., Fitt, B. D. L., Welham, S. J., Shaw, M. W. and McCartney, H. A. 1995. Early development of light leaf spot (Pyrenopeziza brassicae) on winter oilseed rape (Brassica napus) in relation to temperature and leaf wetness. Plant Pathology. 44 (4), pp. 641-654. https://doi.org/10.1111/j.1365-3059.1995.tb01688.x

Forecasting development of light leaf spot (Pyrenopeziza brassicae) epidemics on winter oilseed rape

C1 - Edited contributions to conferences/learned societies

Gladders, P., Fitt, B. D. L. and Welham, S. J. 1995. Forecasting development of light leaf spot (Pyrenopeziza brassicae) epidemics on winter oilseed rape. Rapeseed Today and Tomorrow: Proceedings 9th International Rapeseed Congress, Cambridge, 4-7 July 1995 .

Predicting early development of light leaf spot (Pyrenopeziza brassicae) on winter oilseed rape

C1 - Edited contributions to conferences/learned societies

Gladders, P., Fitt, B. D. L., Figueroa, L., McCartney, H. A., Shaw, M. W. and Welham, S. J. 1995. Predicting early development of light leaf spot (Pyrenopeziza brassicae) on winter oilseed rape.

Sustainability - the Rothamsted experience

B - Book chapters etc edited externally

Johnston, A. E., Landau, S., Payne, R. W., Welham, S. J. and Rayner, A. I. 1995. Sustainability - the Rothamsted experience. in: Barnett, V., Steiner, R. and Payne, R. W. (ed.) Agricultural sustainability: economic, environmental and statistical considerations John Wiley & Sons Chichester, West Sussex. pp. 171-206

Sensitivity to prochloraz in populations of the eyespot fungus, Pseudocercosporella herpotrichoides , in relation to fungicide treatments and their efficacy in continuous winter wheat

A - Papers appearing in refereed journals

Bateman, G. L., Landau, S. and Welham, S. J. 1995. Sensitivity to prochloraz in populations of the eyespot fungus, Pseudocercosporella herpotrichoides , in relation to fungicide treatments and their efficacy in continuous winter wheat. Annals of Applied Biology - AAB. 126 (2), pp. 235-247. https://doi.org/10.1111/j.1744-7348.1995.tb05362.x

Effects of temperature on the development of light leaf spot (Pyrenopeziza brassicae) on oilseed rape (Brassica napus)

A - Papers appearing in refereed journals

Figueroa, L., Fitt, B. D. L., Shaw, M. W., McCartney, H. A. and Welham, S. J. 1995. Effects of temperature on the development of light leaf spot (Pyrenopeziza brassicae) on oilseed rape (Brassica napus). Plant Pathology. 44 (1), pp. 51-62. https://doi.org/10.1111/j.1365-3059.1995.tb02715.x

Genstat 5 Release 3.1 version for Dec Alpha AXP OpenVMS

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1994. Genstat 5 Release 3.1 version for Dec Alpha AXP OpenVMS. Numerical Algorithms Group, Oxford.

Genstat5 Release 3.1 version for Sun 4 Solaris

J - Computer programs

Pyne, R., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1994. Genstat5 Release 3.1 version for Sun 4 Solaris. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3.1 version for Sun 4 SunOS

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1994. Genstat 5 Release 3.1 version for Sun 4 SunOS. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3.1. Version for PC DOS

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1994. Genstat 5 Release 3.1. Version for PC DOS. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3.1. Vax VMS version

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1994. Genstat 5 Release 3.1. Vax VMS version. Numerical Algorithms Group, Oxford.

The jackknife and the bootstrap

G - Articles in popular magazines and other technical publications

Lane, P. W. and Payne, R. W. 1994. The jackknife and the bootstrap. Genstat newsletter. 31, pp. 20-23.

Tools for the construction of effective experimental designs

C1 - Edited contributions to conferences/learned societies

Franklin, M. F. and Payne, R. W. 1994. Tools for the construction of effective experimental designs. Noble, W. (ed.) Proceedings Kansas State University Conference on Applied Statistics in Agriculture, 1993 . Kansas State University, Manhattan. pp. 17-30

Measuring sustainability

A - Papers appearing in refereed journals

Barnett, V., Landau, S. and Welham, S. J. 1994. Measuring sustainability. Environmental And Ecological Statistics. 1, pp. 21-36. https://doi.org/10.1007/BF00714195

Comparisons of some GLMM estimators for a simple binomial model

G - Articles in popular magazines and other technical publications

Waddington, D., Welham, S. J., Gilmour, A. R. and Thompson, R. 1994. Comparisons of some GLMM estimators for a simple binomial model. Genstat newsletter. 30, pp. 13-24.

A summary of new facilities in Genstat 5 Release 3

G - Articles in popular magazines and other technical publications

Payne, R. W. 1994. A summary of new facilities in Genstat 5 Release 3. Genstat newsletter. 30, pp. 7-12.

Data structures and algorithms for an open system to design and analyse generally balanced designs

C1 - Edited contributions to conferences/learned societies

Payne, R. W. and Franklin, M. F. 1994. Data structures and algorithms for an open system to design and analyse generally balanced designs. Dutter, R. and Grossmann, W. (ed.) Compstat: Proceedings 11th Symposium on Computational Statistics, Vienna, 1994 . Physica-Verlag, Heidelberg. pp. 429-434

Linear, non-linear and generalised linear modelling in Genstat. Course at Pfizer Central Research

D1 - Technical reports: non-confidential

Lane, P. W. and Payne, R. W. 1994. Linear, non-linear and generalised linear modelling in Genstat. Course at Pfizer Central Research.

The analysis of repeated measurments. Course at Pfizer Central Research. Volume 2. Genstat - further information

D1 - Technical reports: non-confidential

Kenward, M. G. and Payne, R. W. 1994. The analysis of repeated measurments. Course at Pfizer Central Research. Volume 2. Genstat - further information.

The analysis of repeated measurements. Course at Pfizer Central Research. Volume 1. Course notes

D1 - Technical reports: non-confidential

Kenward, M. G. and Payne, R. W. 1994. The analysis of repeated measurements. Course at Pfizer Central Research. Volume 1. Course notes.

Sustainability - the Rothamsted experience

C1 - Edited contributions to conferences/learned societies

Barnett, V. and Payne, R. W. 1994. Sustainability - the Rothamsted experience. Talbot, M. (ed.) Proceedings European Union HARMA Concerted Action Workshop: Quantitative Methods for Sustainable Agriculture, Edinburgh, 6-7 May 1994 . pp. 65-72

Effects of previous cropping and fungicide timing on the development of light leaf spot (Pyrenopeziza brassicae ) seed yield and quality of winter oilseed rape (Brassica napus )

A - Papers appearing in refereed journals

Figueroa, L., Shaw, M. W., Fitt, B. D. L., McCartney, H. A. and Welham, S. J. 1994. Effects of previous cropping and fungicide timing on the development of light leaf spot (Pyrenopeziza brassicae ) seed yield and quality of winter oilseed rape (Brassica napus ). Annals of Applied Biology - AAB. 124 (2), pp. 221-239. https://doi.org/10.1111/j.1744-7348.1994.tb04130.x

Evaluation of fungicides applied to soil to control naturally- occurring take-all using a balanced-incomplete-block design and very small plots

A - Papers appearing in refereed journals

Bateman, G. L., Hornby, D., Payne, R. W. and Nicholls, P. H. 1994. Evaluation of fungicides applied to soil to control naturally- occurring take-all using a balanced-incomplete-block design and very small plots. Annals of Applied Biology - AAB. 124 (2), pp. 241-251. https://doi.org/10.1111/j.1744-7348.1994.tb04131.x

Sampling to determine patterns of disease in linseed

C1 - Edited contributions to conferences/learned societies

Welham, S. J. and Fitt, B. D. L. 1994. Sampling to determine patterns of disease in linseed. Sampling to Make Decisions. Aspects of Applied Biology .

Observer behaviour in assessment of lodging in cereals

C1 - Edited contributions to conferences/learned societies

Goulds, A., Welham, S. J. and Fitt, B. D. L. 1994. Observer behaviour in assessment of lodging in cereals. Sampling to Make Decisions. Aspects of Applied Biology .

Genstat 2[3] Procedure Library

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1993. Genstat 2[3] Procedure Library. Numerical Algorithms Group, Oxford.

Genstat 5 Release 2.2. Student version for IBM XT/AT and compatible PCs

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1993. Genstat 5 Release 2.2. Student version for IBM XT/AT and compatible PCs. Numerical Algorithms Group, Oxford.

Procedure FDESIGNFILE

D1 - Technical reports: non-confidential

Payne, R. W. 1993. Procedure FDESIGNFILE. Numerical Algorithms Group, Oxford.

Procedure AGDESIGN

D1 - Technical reports: non-confidential

Payne, R. 1993. Procedure AGDESIGN. Numerical Algorithms Group, Oxford.

Procedure AGHIERARCHICAL

D1 - Technical reports: non-confidential

Payne, R. W. 1993. Procedure AGHIERARCHICAL. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3 reference manual

D1 - Technical reports: non-confidential

Payne, R. W., Lane, P. W., Digby, P. G. N., Harding, S. A., Leech, P. K., Morgan, G. W., Todd, A. D., Thompson, R., Tunnicliffe Wilson, G., Welham, S. J. and White, Robin P. 1993. Genstat 5 Release 3 reference manual. Clarendon Press, Oxford.

Genstat 5 Procedure Library Manual Release 3[1]

D1 - Technical reports: non-confidential

Payne, R. W. and Arnold, G. M. 1993. Genstat 5 Procedure Library Manual Release 3[1]. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3 reference summary

D1 - Technical reports: non-confidential

Payne, R. W., Lane, P. W., Digby, P. G. N., Harding, S. A., Leech, P. K., Morgan, G. W., Todd, A. D., Thompson, R., Tunnicliffe Wilson, G., Welham, S. J. and White, Robin P. 1993. Genstat 5 Release 3 reference summary. Numerical Algorithms Group, Oxford.

An introductory course for Genstat 5 Release 3

D1 - Technical reports: non-confidential

Lane, P. W. and Payne, R. W. 1993. An introductory course for Genstat 5 Release 3. Lawes Agricultural Trust, (LAT) Harpenden.

Phytophthora cryptogea root rot of tomato in rockwool nutrient culture: III. Effect of root zone temperature on growth and yield of winter-grown plants

A - Papers appearing in refereed journals

Kennedy, R., Pegg, G. F. and Welham, S. J. 1993. Phytophthora cryptogea root rot of tomato in rockwool nutrient culture: III. Effect of root zone temperature on growth and yield of winter-grown plants. Annals of Applied Biology - AAB. 123 (3), pp. 563-578. https://doi.org/10.1111/j.1744-7348.1993.tb04928.x

Procedure ASWEEP

B - Book chapters etc edited externally

Payne, R. W. 1993. Procedure ASWEEP. in: Payne, R. W., Morgan, G. W. and Arnold, G. M. (ed.) Genstat 5 procedure library manual release 2[3] Numerical Algorithms Group, Oxford. pp. 41-43

Genstat 5 topic course: analysis of linear mixed models

D1 - Technical reports: non-confidential

Payne, R. W. and Welham, S. J. 1993. Genstat 5 topic course: analysis of linear mixed models. Lawes Agricultural Trust, (LAT) Harpenden.

Field tests of bacteria and soil-applied fungicides as control agents for take-all in winter wheat

A - Papers appearing in refereed journals

Hornby, D., Bateman, G. L., Payne, R. W., Brown, M. E., Henden, D. R. and Campbell, R. 1993. Field tests of bacteria and soil-applied fungicides as control agents for take-all in winter wheat. Annals of Applied Biology - AAB. 122 (2), pp. 253-270. https://doi.org/10.1111/j.1744-7348.1993.tb04031.x

Genkey: a program for constructing and printing identification keys and diagnostic tables. Mark 4

J - Computer programs

Payne, R. W. 1993. Genkey: a program for constructing and printing identification keys and diagnostic tables. Mark 4. IACR Rothamsted Experimental Station, Harpenden.

Measuring sustainability

A - Papers appearing in refereed journals

Barnett, V., Landau, S. and Welham, S. J. 1993. Measuring sustainability. Journal of Environmental Statistics. 1, pp. 33-54.

The Classical Experiments and the environment

G - Articles in popular magazines and other technical publications

Perry, J. N., Potts, J. M. and Welham, S. J. 1993. The Classical Experiments and the environment. ARIA Newsletter 1993.

Genstat 5 Procedure Library Manual Release 2[3]

E - Books edited/written by staff member, alone/with others

Payne, R. W. and Arnold, G. M. Morgan, G. W. (ed.) 1993. Genstat 5 Procedure Library Manual Release 2[3]. Numerical Algorithms Group, Oxford.

Procedure GLMM

B - Book chapters etc edited externally

Welham, S. J. 1993. Procedure GLMM. in: Payne, R. W., Morgan, G. W. and Arnold, G. M. (ed.) Genstat 5 procedure library manual release 2[3] Numerical Algorithms Group, Oxford. pp. 154-158

Procedure PDESIGN

B - Book chapters etc edited externally

Payne, R. W. 1993. Procedure PDESIGN. in: Payne, R. W., Morgan, G. W. and Arnold, G. M. (ed.) Genstat 5 procedure library manual release 2[3] Numerical Algorithms Group, Oxford. pp. 244-246

Procedure FACPRODUCT

B - Book chapters etc edited externally

Payne, R. W. 1993. Procedure FACPRODUCT. in: Payne, R. W., Morgan, G. W. and Arnold, G. M. (ed.) Genstat 5 procedure library manual release 2[3] Numerical Algorithms Group, Oxford. pp. 126-127

Procedure AKEY

B - Book chapters etc edited externally

Payne, R. W. 1993. Procedure AKEY. in: Payne, R. W., Morgan, G. W. and Arnold, G. M. (ed.) Genstat 5 procedure library manual release 2[3] Numerical Algorithms Group, Oxford. pp. 23-27

Procedure AFUNITS

B - Book chapters etc edited externally

Payne, R. W. 1993. Procedure AFUNITS. in: Payne, R. W., Morgan, G. W. and Arnold, G. M. (ed.) Genstat 5 procedure library manual release 2[3] Numerical Algorithms Group, Oxford. pp. 17-18

Procedure AFCYCLIC

B - Book chapters etc edited externally

Payne, R. W. 1993. Procedure AFCYCLIC. in: Payne, R. W., Morgan, G. W. and Arnold, G. M. (ed.) Genstat 5 procedure library manual release 2[3] Numerical Algorithms Group, Oxford. pp. 14-16

Procedure AFALPHA

B - Book chapters etc edited externally

Payne, R. W. 1993. Procedure AFALPHA. in: Payne, R. W., Morgan, G. W. and Arnold, G. M. (ed.) Genstat 5 procedure library manual release 2[3] Numerical Algorithms Group, Oxford. pp. 11-13

The use of identification keys and diagnostic tables in statistical work

C1 - Edited contributions to conferences/learned societies

Payne, R. W. 1993. The use of identification keys and diagnostic tables in statistical work. Computational Statistics. Proceedings 10th Symposium on Computational Statistics, COMPSTAT, Neuchatel, August 1992 . Physica-Verlag, Heidelberg.

Genstat 5 Release 2.2 (implementation for Silicon Graphics)

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1992. Genstat 5 Release 2.2 (implementation for Silicon Graphics). Numerical Algorithms Group, Oxford.

Experiments for testing treatments to control take-all

C2 - Non-edited contributions to conferences

Payne, R. W., Hornby, D. and Bateman, G. L. 1992. Experiments for testing treatments to control take-all. Proceedings XVIth International Biometric Conference, Hamilton, New Zealand, 7-11 December 1992 . pp. 176

Genstat 5 topic course notes - statistical modelling: regression, curve fitting and generalized linear models

D1 - Technical reports: non-confidential

Payne, R. W. and Lane, P. W. 1992. Genstat 5 topic course notes - statistical modelling: regression, curve fitting and generalized linear models. Numerical Algorithms Group, Oxford.

Observations on the bulking and development of tuber size distribution in maincrop potatoes at Rothamsted in 1964-75

A - Papers appearing in refereed journals

Hide, G. A. and Welham, S. J. 1992. Observations on the bulking and development of tuber size distribution in maincrop potatoes at Rothamsted in 1964-75. Potato research. 35, pp. 235-247.

General balance, combination of information and the analysis of covariance

A - Papers appearing in refereed journals

Payne, R. W. and Tobias, R. D. 1992. General balance, combination of information and the analysis of covariance. Scandinavian Journal of Statistics. 19 (1), pp. 3-23.

Analysis of HMW glutenin subunits encoded by chromosome 1A of bread wheat (Triticum aestivum L.) indicates quantitative effects on grain quality

A - Papers appearing in refereed journals

Halford, N. G., Field, J. M., Blair, H., Urwin, P., Moore, K., Robert, L., Thompson, R., Flavell, R. B., Tatham, A. S. and Shewry, P. R. 1992. Analysis of HMW glutenin subunits encoded by chromosome 1A of bread wheat (Triticum aestivum L.) indicates quantitative effects on grain quality. Theoretical and Applied Genetics. 83 (3), pp. 373-378. https://doi.org/10.1007/BF00224285

Genstat Procedure Library news

G - Articles in popular magazines and other technical publications

Payne, R. W. 1992. Genstat Procedure Library news. Genstat newsletter. 27, p. 5.

Printing of bit patterns

A - Papers appearing in refereed journals

Payne, R. W. 1991. Printing of bit patterns. Journal of the Royal Statistical Society, Series C (Applied Statistics). 40 (1), pp. 229-233. https://doi.org/10.2307/2347936

Construction of irredundant test sets

A - Papers appearing in refereed journals

Payne, R. W. 1991. Construction of irredundant test sets. Journal of the Royal Statistical Society, Series C (Applied Statistics). 40 (1), pp. 213-229. https://doi.org/10.2307/2347935

Yeasts: characteristics and identification

E - Books edited/written by staff member, alone/with others

Barnett, J. A., Payne, R. W. and Yarrow, D. 1990. Yeasts: characteristics and identification. Cambridge University Press (CUP) Cambridge.

A remark on algorithm AS 65: interpreting structure formulae

A - Papers appearing in refereed journals

Payne, R. W. 1990. A remark on algorithm AS 65: interpreting structure formulae. Journal of applied statistics. 39, pp. 167-175.

A comparison of algorithms for combination of information in generally balanced designs.

C1 - Edited contributions to conferences/learned societies

Payne, R. W. and Welham, S. J. 1990. A comparison of algorithms for combination of information in generally balanced designs. Compstat 1990.. Springer-Verlag, Heidelberg.. pp. 297-302.

A remark on algorithm AS 65: interpreting structure formulae.

A - Papers appearing in refereed journals

Payne, R. W. 1990. A remark on algorithm AS 65: interpreting structure formulae. Applied Statistics. 39 (1), pp. 167-175. https://doi.org/10.2307/2347834

Genstat 5 release 2 reference summary . 97pp.

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Ainsley, A. E., Bicknell, K. E., Digby, P. G. N., Harding, S. A., Leech, P. K., Simpson, H. R., Todd, A. D., Welham, S. J., White, Robin P., Gower, J. C., Tunnicliffe Wilson, G. and Verrier, P. J. 1989. Genstat 5 release 2 reference summary . 97pp.

A guide to procedures in Genstat.

G - Articles in popular magazines and other technical publications

Payne, R. W., Digby, P. G. N. and Arnold, G. M. 1989. A guide to procedures in Genstat. Genstat newsletter. 23, pp. 6-21.

Genstat Procedure Library for release 1.3.

G - Articles in popular magazines and other technical publications

Payne, R. W. 1989. Genstat Procedure Library for release 1.3. Genstat newsletter. 22, pp. 5-6.

Procedure GENPROC.

D1 - Technical reports: non-confidential

Arnold, G. M. and Payne, R. W. 1989. Procedure GENPROC. Numerical Algorithms Group, Oxford.

Procedure TTEST.

D1 - Technical reports: non-confidential

Welham, S. J. 1989. Procedure TTEST. Numerical Algorithms Group, Oxford.

Procedure SMOOTHSPECTRUM.

D1 - Technical reports: non-confidential

Tunnicliffe Wilson, G. T. and Welham, S. J. 1989. Procedure SMOOTHSPECTRUM. Numerical Algorithms Group, Oxford.

Procedure BJIDENTIFY.

D1 - Technical reports: non-confidential

Tunnicliffe Wilson, G. T. and Welham, S. J. 1989. Procedure BJIDENTIFY. Numerical Algorithms Group, Oxford.

Procedure BJFORECAST.

D1 - Technical reports: non-confidential

Tunnicliffe Wilson, G. T. and Welham, S. J. 1989. Procedure BJFORECAST. Numerical Algorithms Group, Oxford.

Procedure BJESTIMATE.

D1 - Technical reports: non-confidential

Tunnicliffe Wilson, G. T. and Welham, S. J. 1989. Procedure BJESTIMATE. Numerical Algorithms Group, Oxford.

Procedure ANTORDER.

D1 - Technical reports: non-confidential

Ridout, M. S. and Payne, R. W. 1989. Procedure ANTORDER. Numerical Algorithms Group, Oxford.

Procedure ANTTEST.

D1 - Technical reports: non-confidential

Payne, R. W. and Ridout, M. S. 1989. Procedure ANTTEST. Numerical Algorithms Group, Oxford.

Procedure MANCOVA.

D1 - Technical reports: non-confidential

Payne, R. W. and Arnold, G. M. 1989. Procedure MANCOVA. Numerical Algorithms Group, Oxford.

Procedure MANOVA.

D1 - Technical reports: non-confidential

Payne, R. W. and Arnold, G. M. 1989. Procedure MANOVA. Numerical Algorithms Group, Oxford.

Procedure SUBSET.

D1 - Technical reports: non-confidential

Payne, R. W. 1989. Procedure SUBSET. Numerical Algorithms Group, Oxford.

Procedure VHOMOGENEITY.

D1 - Technical reports: non-confidential

Payne, R. W. 1989. Procedure VHOMOGENEITY. Numerical Algorithms Group, Oxford.

Procedure LIBEXAMPLE.

D1 - Technical reports: non-confidential

Payne, R. W. 1989. Procedure LIBEXAMPLE. Numerical Algorithms Group, Oxford.

Procedure LIBHELP.

D1 - Technical reports: non-confidential

Payne, R. W. 1989. Procedure LIBHELP. Numerical Algorithms Group, Oxford.

Procedure LIBINFORM.

D1 - Technical reports: non-confidential

Payne, R. W. 1989. Procedure LIBINFORM. Numerical Algorithms Group, Oxford.

Procedure LIBMANUAL.

D1 - Technical reports: non-confidential

Payne, R. W. 1989. Procedure LIBMANUAL. Numerical Algorithms Group, Oxford.

Procedure NOTICE.

D1 - Technical reports: non-confidential

Payne, R. W. 1989. Procedure NOTICE. Numerical Algorithms Group, Oxford.

Procedure PERCENT.

D1 - Technical reports: non-confidential

Payne, R. W. 1989. Procedure PERCENT. Numerical Algorithms Group, Oxford.

Procedure REPMEAS.

D1 - Technical reports: non-confidential

Payne, R. W. 1989. Procedure REPMEAS. Numerical Algorithms Group, Oxford.

Procedure CHECKARGUMENT.

D1 - Technical reports: non-confidential

Payne, R. W. 1989. Procedure CHECKARGUMENT. Numerical Algorithms Group, Oxford.

Procedure AONEWAY.

D1 - Technical reports: non-confidential

Payne, R. W. 1989. Procedure AONEWAY. Numerical Algorithms Group, Oxford.

Procedure ALIAS.

D1 - Technical reports: non-confidential

Payne, R. W. 1989. Procedure ALIAS. Numerical Algorithms Group, Oxford.

Procedure MANNWHITNEY.

D1 - Technical reports: non-confidential

Mclaren, P. J., Simpson, H. R. and Welham, S. J. 1989. Procedure MANNWHITNEY. Numerical Algorithms Group, Oxford.

Procedure KRUSKAL.

D1 - Technical reports: non-confidential

Mclaren, P. J., Simpson, H. R. and Welham, S. J. 1989. Procedure KRUSKAL. Numerical Algorithms Group, Oxford.

Procedure NPRANK.

D1 - Technical reports: non-confidential

Mclaren, P. J., Simpson, H. R. and Welham, S. J. 1989. Procedure NPRANK. Numerical Algorithms Group, Oxford.

Procedure NPCHECK.

D1 - Technical reports: non-confidential

Mclaren, P. J., Simpson, H. R. and Welham, S. J. 1989. Procedure NPCHECK. Numerical Algorithms Group, Oxford.

Procedure SPEARMAN.

D1 - Technical reports: non-confidential

Mclaren, P. J., Simpson, H. R. and Welham, S. J. 1989. Procedure SPEARMAN. Numerical Algorithms Group, Oxford.

Procedure CONCORD.

D1 - Technical reports: non-confidential

Mclaren, P. J., Simpson, H. R. and Welham, S. J. 1989. Procedure CONCORD. Numerical Algorithms Group, Oxford.

Procedure WILCOXON.

D1 - Technical reports: non-confidential

Mclaren, P. J., Simpson, H. R. and Welham, S. J. 1989. Procedure WILCOXON. Numerical Algorithms Group, Oxford.

Procedure WILCOXON.

D1 - Technical reports: non-confidential

Mclaren, P. J., Simpson, H. R. and Welham, S. J. 1989. Procedure WILCOXON. Numerical Algorithms Group, Oxford.

Genstat 5 procedure library manual. Release 1.3[2]. 175 pp.

E - Books edited/written by staff member, alone/with others

Payne, R. W. Arnold, G. M. (ed.) 1989. Genstat 5 procedure library manual. Release 1.3[2]. 175 pp.

An experimental design and procedures for testing putative controls against naturally-occurring take-all in the field.

A - Papers appearing in refereed journals

Hornby, D., Bateman, G. L., Payne, R. W., Brown, M. E. and Henden, D. R. 1989. An experimental design and procedures for testing putative controls against naturally-occurring take-all in the field. Annals of Applied Biology - AAB. 115 (2), pp. 195-208. https://doi.org/10.1111/j.1744-7348.1989.tb03377.x

A study of criteria for constructing identification keys containing tests with unequal costs.

A - Papers appearing in refereed journals

Payne, R. W. and Thompson, C. J. 1989. A study of criteria for constructing identification keys containing tests with unequal costs. Computational Statistics Quarterly. 1, pp. 43-52.

Genstat 5 introductory course notes.

E - Books edited/written by staff member, alone/with others

Digby, P. G. N., Harding, S. A., Lane, P. W., Payne, R. W. and Simpson, H. R. 1988. Genstat 5 introductory course notes.

The transmission of potato virus Y by aphids of different vectoring abilities

A - Papers appearing in refereed journals

Gibson, R. W., Payne, R. W. and Katis, N. 1988. The transmission of potato virus Y by aphids of different vectoring abilities. Annals of Applied Biology - AAB. 113 (1), pp. 35-43. https://doi.org/10.1111/j.1744-7348.1988.tb03279.x

Identification keys, diagnostic tables and expert systems.

C1 - Edited contributions to conferences/learned societies

Payne, R. W. 1988. Identification keys, diagnostic tables and expert systems. Compstat 88. Eds. D. Edwards & N.E. Raun. Heidelberg : Physica Verlag. pp. 199-204

Genstat 5 reference manual.

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Ainsley, A. E., Bicknell, K. E., Digby, P. G. N., Harding, S. A., Leech, P. K., Simpson, H. R., Todd, A. D., Verrier, P. J., White, Robin P., Gower, J. C., Tunnicliffe Wilson, G. and Paterson, L. J. 1987. Genstat 5 reference manual.

Conversion from Genstat 4 to Genstat 5.

G - Articles in popular magazines and other technical publications

Ainsley, A. E., Digby, P. G. N., Harding, S. A., Lane, P. W., Payne, R. W. and Simpson, H. R. 1987. Conversion from Genstat 4 to Genstat 5. Genstat newsletter. 19, pp. 5-39.

Design criteria for a flexible statistical language.

G - Articles in popular magazines and other technical publications

Payne, R. W. and Lane, P. W. 1986. Design criteria for a flexible statistical language.

On identifying yeasts and related problems.

G - Articles in popular magazines and other technical publications

Gower, J. C. and Payne, R. W. 1986. On identifying yeasts and related problems.

Genkey - a program for constructing aids to identification

A - Papers appearing in refereed journals

Payne, R. W. 1985. Genkey - a program for constructing aids to identification. Informatique et Sciences Humaines Paris. 14 (64), pp. 46-62.

A study of selection criteria for constructing identification keys

A - Papers appearing in refereed journals

Payne, R. W. and Dixon, T. J. 1984. A study of selection criteria for constructing identification keys. COMPSTAT 1984. pp. 148-153. https://doi.org/10.1007/978-3-642-51883-6_20

Computer construction and typesetting of identification keys

A - Papers appearing in refereed journals

Payne, R. W. 1984. Computer construction and typesetting of identification keys. New Phytologist. 96 (4), pp. 631-634. https://doi.org/10.1111/j.1469-8137.1984.tb03597.x

Buffered output in Fortran

A - Papers appearing in refereed journals

Henstridge, J. D., Payne, R. W. and Baker, R. J. 1984. Buffered output in Fortran. The Computer Journal. 27 (2), pp. 179-184.

Software notices. New developments in Genstat

G - Articles in popular magazines and other technical publications

Lane, P. W., Payne, R. W. and Simpson, H. R. 1983. Software notices. New developments in Genstat. Computational Statistics Quarterly. 1, pp. 263-267.

Diagnostic keys to identify individual and groups of taxa

A - Papers appearing in refereed journals

Payne, R. W. 1982. Diagnostic keys to identify individual and groups of taxa. Groupe de Recherche Claude Francois picard structure de l'information . 29.

Statistical Programs for Microcomputers: The Implementation of a Directory for Data Structures

A - Papers appearing in refereed journals

Digby, P. G. N. and Payne, R. W. 1982. Statistical Programs for Microcomputers: The Implementation of a Directory for Data Structures. COMPSTAT. pp. 192-197.

REML — a program for the analysis of non-orthogonal data by restricted maximum likelihood

C1 - Edited contributions to conferences/learned societies

Robinson, D. L., Thompson, R. and Digby, P. G. N. 1982. REML — a program for the analysis of non-orthogonal data by restricted maximum likelihood. Compstat 1982, part II (supplement). Vienna, Austria Springer.

The construction by computer of a diagnostic key to the genera of yeasts and other such groups of taxa

A - Papers appearing in refereed journals

Payne, R. W., Yarrow, D. and Barnett, J. A. 1982. The construction by computer of a diagnostic key to the genera of yeasts and other such groups of taxa. Journal of General Microbiology. 128 (6), pp. 1265-1277. https://doi.org/10.1099/00221287-128-6-1265

The specification of experimental-designs to ANOVA programs - comment

A - Papers appearing in refereed journals

Payne, R. W. 1981. The specification of experimental-designs to ANOVA programs - comment. American statistician. 35 (2), pp. 107-107. https://doi.org/10.2307/2683153

Selection criteria for the construction of efficient diagnostic keys

A - Papers appearing in refereed journals

Payne, R. W. 1981. Selection criteria for the construction of efficient diagnostic keys. Journal Of Statistical Planning And Inference. 5 (1), pp. 27-36. https://doi.org/10.1016/0378-3758(81)90048-3

Facilities for modeling linear and non-linear bioassay relationships in mlp

A - Papers appearing in refereed journals

Payne, R. W. 1981. Facilities for modeling linear and non-linear bioassay relationships in mlp. Chemistry & Industry. (15), pp. 525-528.

The dual polyclave - an aid to more efficient identification

A - Papers appearing in refereed journals

Payne, R. W., Lamacraft, R. R. and White, R. P. 1981. The dual polyclave - an aid to more efficient identification. New Phytologist. 87 (1), pp. 121-126. https://doi.org/10.1111/j.1469-8137.1981.tb01696.x

Alternative characters in identification keys

A - Papers appearing in refereed journals

Payne, R. W. 1980. Alternative characters in identification keys. Classification Bulletin. 4 (4), pp. 16-21.

Stability of insecticide resistance in the peach-potato aphid, Myzus persicae (Sulzer)

A - Papers appearing in refereed journals

Sawicki, R. M., Devonshire, A. L., Payne, R. W. and Petzing, S. M. 1980. Stability of insecticide resistance in the peach-potato aphid, Myzus persicae (Sulzer). Pesticide Science. 11 (1), pp. 33-42. https://doi.org/10.1002/ps.2780110108

Identification keys and diagnostic tables - a review

A - Papers appearing in refereed journals

Payne, R. W. and Preece, D. A. 1980. Identification keys and diagnostic tables - a review. Journal of the Royal Statistical Society, Series A (Statistics in Society). 143, pp. 253-292. https://doi.org/10.2307/2982129

A general algorithm for analysis of variance

A - Papers appearing in refereed journals

Payne, R. W. and Wilkinson, G. N. 1977. A general algorithm for analysis of variance. Journal of the Royal Statistical Society, Series C (Applied Statistics). 26 (3), pp. 251-260. https://doi.org/10.2307/2346965

Reticulation and other methods of reducing size of printed diagnostic keys

A - Papers appearing in refereed journals

Payne, R. W. 1977. Reticulation and other methods of reducing size of printed diagnostic keys. Journal of General Microbiology. 98 (FEB), pp. 595-597. https://doi.org/10.1099/00221287-98-2-595

Incorporating checks against observer error into identification keys

A - Papers appearing in refereed journals

Payne, R. W. and Preece, D. A. 1977. Incorporating checks against observer error into identification keys. New Phytologist. 79 (1), pp. 203-209. https://doi.org/10.1111/j.1469-8137.1977.tb02196.x

Ethirimol-sensitivity in populations of erysiphe-graminis from plots of spring barley

A - Papers appearing in refereed journals

Smith, J. E., Payne, R. W. and Bainbridge, A. 1977. Ethirimol-sensitivity in populations of erysiphe-graminis from plots of spring barley. Annals of Applied Biology - AAB. 87 (3), pp. 345-354. https://doi.org/10.1111/j.1744-7348.1977.tb01899.x

Genkey - a program for constructing diagnostic keys

A - Papers appearing in refereed journals

Payne, R. W. 1975. Genkey - a program for constructing diagnostic keys. Systematics Association Spec. 7, pp. 65-72.

A comparison of different criteria for selecting binary tests in diagnostic keys

A - Papers appearing in refereed journals

Gower, J. C. and Payne, R. W. 1975. A comparison of different criteria for selecting binary tests in diagnostic keys. Biometrika. 62 (3), pp. 665-672. https://doi.org/10.2307/2335526

New way of representing diagnostic keys

A - Papers appearing in refereed journals

Payne, R. W., Walton, E. and Barnett, J. A. 1974. New way of representing diagnostic keys. Journal of General Microbiology. 83 (AUG), pp. 413-414. https://doi.org/10.1099/00221287-83-2-413

Recovery of inter-block information when clock sizes are unequal

A - Papers appearing in refereed journals

Patterson, H. D. and Thompson, R. 1971. Recovery of inter-block information when clock sizes are unequal. Biometrika. 58 (3), pp. 545-554.