Genetic analysis of longevity data in the UK: present practice and considerations for the future

Visscher, P., Thompson, R., Yazdi, H., Hill, W. G. and Brotherstone, S. 1999. Genetic analysis of longevity data in the UK: present practice and considerations for the future. Proceedings of the Genetic Improvement of Functional Traits in cattle longevity, Interbull. Jouy-en-Jossas, France, 1999.

Authors	Visscher, P., Thompson, R., Yazdi, H., Hill, W. G. and Brotherstone, S.
Year of Publication	1999
Conference title	Interbull
Open access	Published as bronze (free) open access
Journal	Interbull
Journal citation	21, pp. 16-22
Book title	Proceedings of the Genetic Improvement of Functional Traits in cattle longevity, Interbull. Jouy-en-Jossas, France, 1999
Funder project or code	311
	445
	Project: 144035
Publisher's version	437-Article Text-868-1-10-20120305.pdf
Output status	Published
Copyright license	Publisher copyright

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Linear and threshold model genetic parameters for disease, fertility and milk production in dairy cattle

A - Papers appearing in refereed journals

Kadarmideen, H. N., Thompson, R. and Simm, G. 2000. Linear and threshold model genetic parameters for disease, fertility and milk production in dairy cattle. Animal Science. 71 (3), pp. 411-419. https://doi.org/10.1017/S1357729800055338

Generalized linear mixed models: an improved estimating procedure

C1 - Edited contributions to conferences/learned societies

Pan, J-X. and Thompson, R. 2000. Generalized linear mixed models: an improved estimating procedure. Bethlehem, J. G. and Vanderheijden, P. G. M. (ed.) COMPSTAT: Proceedings in Computational Statistics 2000 . Physica-Verlag, Heidelberg. pp. 373-378

Spectral analysis of spatial point patterns in incompletely observed regions

C1 - Edited contributions to conferences/learned societies

Alexander, C. J., Mugglestone, M. A., Taylor, P. C., Thompson, R. and Morgan, G. W. 2000. Spectral analysis of spatial point patterns in incompletely observed regions. Proceedings International Conference on Spatial Temporal Modelling and its Applications, Leeds, 7-9 July 1999 . Leeds University Press. pp. 113-116

Marker-assisted selection using ridge regression

A - Papers appearing in refereed journals

Whittaker, J. C., Thompson, R. and Denham, M. C. 2000. Marker-assisted selection using ridge regression. Genetics Research. 75 (2), pp. 249-252. https://doi.org/10.1017/S0016672399004462

A link function approach to model heterogeneity of residual variances over time in lactation curve analyses

A - Papers appearing in refereed journals

Jaffrezic, F., White, I. M. S., Thompson, R. and Hill, W. G. 2000. A link function approach to model heterogeneity of residual variances over time in lactation curve analyses. Journal of Dairy Science. 83 (5), pp. 1089-1093. https://doi.org/10.3168/jds.S0022-0302(00)74973-3

A comparison of two survival analysis methods with the number of lactations as a discrete time value

C1 - Edited contributions to conferences/learned societies

Yazdi, M. H., Thompson, R., Ducrocq, V. and Visscher, P. 1999. A comparison of two survival analysis methods with the number of lactations as a discrete time value. Proceedings international workshop on EU concerted action Genetic Improvement of Functional Traits in Cattle (GIFT). Interbull.

Prospects for statistical methods in dairy cattle breeding

C1 - Edited contributions to conferences/learned societies

Thompson, R. and Mantysaari, E. A. 1999. Prospects for statistical methods in dairy cattle breeding. Proceedings of the Genetic Improvement of Functional Traits in cattle longevity, Interbull. Jouy-en-Jossas, France, 1999.

Multi-trait covariance functions to estimate genetic correlations between milk yield, dry matter intake and live weight during lactation

C1 - Edited contributions to conferences/learned societies

Veerkamp, R. F. and Thompson, R. 1999. Multi-trait covariance functions to estimate genetic correlations between milk yield, dry matter intake and live weight during lactation. Metabolic stress in dairy cows. British Society of Animal Science Occasional Publication No. 24 . Cambridge University Press (CUP). https://doi.org/10.1017/S1463981500043168

A covariance function for feed intake, live weight and milk yield estimated using a random regression model

A - Papers appearing in refereed journals

Veerkamp, R. F. and Thompson, R. 1999. A covariance function for feed intake, live weight and milk yield estimated using a random regression model. Journal of Dairy Science. 82 (7), pp. 1565-1573. https://doi.org/10.3168/jds.S0022-0302(99)75384-1

Reduced alarm response by peach-potato aphids, Myzus persicae (Hemiptera: Aphididae), with knock-down resistance to insecticides (kdr ) may impose a fitness cost through increased vulnerability to natural enemies

A - Papers appearing in refereed journals

Foster, S. P., Woodcock, C. M., Williamson, M. S., Devonshire, A. L., Denholm, I. and Thompson, R. 1999. Reduced alarm response by peach-potato aphids, Myzus persicae (Hemiptera: Aphididae), with knock-down resistance to insecticides (kdr ) may impose a fitness cost through increased vulnerability to natural enemies. Bulletin of Entomological Research. 89 (2), pp. 133-138. https://doi.org/10.1017/S0007485399000218

Genetic and environmental smoothing of lactation curves with cubic splines

A - Papers appearing in refereed journals

White, I. M. S., Thompson, R. and Brotherstone, S. 1999. Genetic and environmental smoothing of lactation curves with cubic splines. Journal of Dairy Science. 82 (3), pp. 632-638. https://doi.org/10.3168/jds.S0022-0302(99)75277-X

Prospects for across-flock genetic evaluation in Australian Merino sheep

A - Papers appearing in refereed journals

Atkins, K. D., Gilmour, A. R., Thompson, R., Coelli, K. A. and Casey, A. E. 1998. Prospects for across-flock genetic evaluation in Australian Merino sheep. Wool Technology and Sheep Breeding. 46 (1), pp. 1-11.

Quasi-Monte Carlo EM algorithm for MLEs in generalized linear mixed models

C1 - Edited contributions to conferences/learned societies

Pan, J-X and Thompson, R. 1998. Quasi-Monte Carlo EM algorithm for MLEs in generalized linear mixed models. Payne, R. W. and Green, P. (ed.) Compstat 1998: Proceedings 13th Symposium in Computational Statistics, Bristol, 1998 . Physica-Verlag, Heidelberg. pp. 419-424 https://doi.org/10.1007/978-3-662-01131-7_58

Multi-trait covariance functions to model genetic variation in the dynamic relation between feed intake, live weight and milk yield during lactation

C2 - Non-edited contributions to conferences

Veerkamp, R. F. and Thompson, R. 1998. Multi-trait covariance functions to model genetic variation in the dynamic relation between feed intake, live weight and milk yield during lactation. Proceedings 49th Annual Meeting of the EAAP, Warsaw, 24-27 August 1998 .

Multi-trait covariance functions to model between animal variation in the dynamic relation between feed intake and milk yield during lactation

C2 - Non-edited contributions to conferences

Veerkamp, R. F., Thompson, R., Meuwissen, T. H. E. and Pool, M. H. 1998. Multi-trait covariance functions to model between animal variation in the dynamic relation between feed intake and milk yield during lactation. Proceedings 5th Zodiac Symposium on Regulation of Feed Intake, Wageningen, 22-24 April 1998 .

(Co)variance structures for linear models in the analysis of plant improvement data

C1 - Edited contributions to conferences/learned societies

Gilmour, A. R., Cullis, B. R., Frensham, A. B. and Thompson, R. 1998. (Co)variance structures for linear models in the analysis of plant improvement data. Payne, R. W. and Green, P. (ed.) Compstat 1998: Proceedings 13th Symposium in Computational Statistics, Bristol, 1998 . Physica-Verlag, Heidelberg. pp. 53-64 https://doi.org/10.1007/978-3-662-01131-7_5

Smoothing biological data with splines

C1 - Edited contributions to conferences/learned societies

White, I. M. S., Cullis, B. R., Gilmour, A. R. and Thompson, R. 1998. Smoothing biological data with splines. Invited Papers 19th International Biometric Conference, Cape Town, 14-18 December 1998 . pp. 57-66

Multiplicative models for interaction in spatial mixed model analyses for Multi-Environment Trial data

C1 - Edited contributions to conferences/learned societies

Smith, A. D., Cullis, B. R., Gilmour, A. R. and Thompson, R. 1998. Multiplicative models for interaction in spatial mixed model analyses for Multi-Environment Trial data. Invited Papers 19th International Biometric Conference, Cape Town, 14-18 December 1998 . pp. 91-101

Spatial analysis of multi-environment early generation variety trials

A - Papers appearing in refereed journals

Cullis, B. R., Gogel, B., Verbyla, A. and Thompson, R. 1998. Spatial analysis of multi-environment early generation variety trials. Biometrics. 54 (1), pp. 1-18. https://doi.org/10.2307/2533991

Estimation of genetic parameters using health, fertility and production data from a management recording system for dairy cattle

A - Papers appearing in refereed journals

Pryce, J. E., Esslemont, R. J., Thompson, R., Veerkamp, R. F., Kossaibati, M. A. and Simm, G. 1998. Estimation of genetic parameters using health, fertility and production data from a management recording system for dairy cattle. Animal Science. 66 (3), pp. 577-584. https://doi.org/10.1017/S1357729800009152

Use of prior information in forming selection indices

A - Papers appearing in refereed journals

Goddard, M. E. and Thompson, R. 1998. Use of prior information in forming selection indices. Journal of Animal Breeding and Genetics. 115 (5), pp. 327-340. https://doi.org/10.1111/j.1439-0388.1998.tb00354.x

Across-flock evaluation and optimisation of pedigree recording for merino sheep

C1 - Edited contributions to conferences/learned societies

Atkins, K. D., Gilmour, A. R., Thompson, R. and Coelli, K. A. 1998. Across-flock evaluation and optimisation of pedigree recording for merino sheep. Proceedings 6th World Congress on Genetics Applied to Livestock Production, Armidale, Australia, 11-16 January 1998 .

Reformulated generalised linear (mixed) model aids multiple trait genetic evaluation with polychotomous calving ease

C1 - Edited contributions to conferences/learned societies

Gilmour, A. R. and Thompson, R. 1998. Reformulated generalised linear (mixed) model aids multiple trait genetic evaluation with polychotomous calving ease. Proceedings 6th World Congress on Genetics Applied to Livestock Production, Armidale, Australia, 11-16 January 1998 .

Modelling variance parameters in ASREML for repeated measures data

C1 - Edited contributions to conferences/learned societies

Gilmour, A. R. and Thompson, R. 1998. Modelling variance parameters in ASREML for repeated measures data. Proceedings 6th World Congress on Genetics Applied to Livestock Production, Armidale, Australia, 11-16 January 1998 .

Genetic parameters for live animal conformation measures of British pedigree beef cattle

C1 - Edited contributions to conferences/learned societies

Crump, R. E., Simm, G. and Thompson, R. 1998. Genetic parameters for live animal conformation measures of British pedigree beef cattle. Proceedings 6th World Congress on Genetics Applied to Livestock Production, Armidale, Australia, 11-16 January 1998 .

Genstat 5 Release 4.1 reference manual supplement

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Gilmour, A. R., Harding, S. A., Morgan, G. W., Murray, D. A., Thompson, R., Todd, A. D., Tunnicliffe Wilson, G., Webster, R. and Welham, S. J. 1997. Genstat 5 Release 4.1 reference manual supplement. Numerical Algorithms Group, Oxford.

Genstat for Windows command language manual

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Gilmour, A. R., Harding, S. A., Morgan, G. W., Murray, D. A., Thompson, R., Todd, A. D., Tunnicliffe Wilson, G., Webster, R. and Welham, S. J. 1997. Genstat for Windows command language manual. Numerical Algorithms Group, Oxford.

Genetic aspects of common health disorders and measures of fertility in Holstein Friesian dairy cattle

A - Papers appearing in refereed journals

Pryce, J. E., Veerkamp, R. F., Thompson, R., Hill, W. G. and Simm, G. 1997. Genetic aspects of common health disorders and measures of fertility in Holstein Friesian dairy cattle. Animal Science. 65 (3), pp. 353-360. https://doi.org/10.1017/S1357729800008559

Genstat 5 Release 4.1 reference summary

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Gilmour, A. R., Harding, S. A., Morgan, G. W., Murray, D. A., Thompson, R., Todd, A. D., Tunnicliffe Wilson, G., Webster, R. and Welham, S. J. 1997. Genstat 5 Release 4.1 reference summary. Numerical Algorithms Group, Oxford.

A population genetics model of marker-assisted selection

A - Papers appearing in refereed journals

Luo, Z. W., Thompson, R. and Woolliams, J. A. 1997. A population genetics model of marker-assisted selection. Genetics. 146 (3), pp. 1173-1183.

A genetic analysis of egg quality traits and their maternal influence on offspring-parental regressions of juvenile body weight performance in broiler chickens

A - Papers appearing in refereed journals

Koerhuis, A. N. M., Mckay, J. C., Hill, W. G. and Thompson, R. 1997. A genetic analysis of egg quality traits and their maternal influence on offspring-parental regressions of juvenile body weight performance in broiler chickens. Livestock Production Science. 49 (3), pp. 203-215. https://doi.org/10.1016/S0301-6226(97)00002-X

Multivariate analysis of test day milk yields of British Holstein- Freisian heifers using Gibbs sampling

A - Papers appearing in refereed journals

Firat, M. Z., Theobald, C. M. and Thompson, R. 1997. Multivariate analysis of test day milk yields of British Holstein- Freisian heifers using Gibbs sampling. Acta Agriculturae Scandinavica Section A-Animal Science. 47 (4), pp. 221-229. https://doi.org/10.1080/09064709709362390

Univariate analysis of test day milk yields of British Holstein - Friesian heifers using Gibbs sampling

A - Papers appearing in refereed journals

Firat, M. Z., Theobald, C. M. and Thompson, R. 1997. Univariate analysis of test day milk yields of British Holstein - Friesian heifers using Gibbs sampling. Acta Agriculturae Scandinavica Section A-Animal Science. 47 (4), pp. 213-220. https://doi.org/10.1080/09064709709362389

Individual animal model estimates of genetic correlations between performance test and reproduction traits of Landrace pigs performance tested in a commercial nucleus herd

A - Papers appearing in refereed journals

Crump, R. E., Thompson, R., Haley, C. S. and Mercer, J. 1997. Individual animal model estimates of genetic correlations between performance test and reproduction traits of Landrace pigs performance tested in a commercial nucleus herd. Animal Science. 65 (2), pp. 291-298. https://doi.org/10.1017/S135772980001660X

Individual animal model estimates of genetic parameters for reproduction traits of Landrace pigs performance tested in a commercial nucleus herd

A - Papers appearing in refereed journals

Crump, R. E., Haley, C. S., Thompson, R. and Mercer, J. 1997. Individual animal model estimates of genetic parameters for reproduction traits of Landrace pigs performance tested in a commercial nucleus herd. Animal Science. 65 (2), pp. 285-290. https://doi.org/10.1017/S1357729800016593

Individual animal model estimates of genetic parameters for performance test traits of male and female Landrace pigs tested in a commercial nucleus herd

A - Papers appearing in refereed journals

Crump, R. E., Haley, C. S., Thompson, R. and Mercer, J. 1997. Individual animal model estimates of genetic parameters for performance test traits of male and female Landrace pigs tested in a commercial nucleus herd. Animal Science. 65 (2), pp. 275-283. https://doi.org/10.1017/S1357729800016581

Results of multivariate individual animal model genetic evaluations of British pedigree beef cattle

A - Papers appearing in refereed journals

Crump, R. E., Simm, G., Nicholson, D., Findlay, R. H., Bryan, J. G. E. and Thompson, R. 1997. Results of multivariate individual animal model genetic evaluations of British pedigree beef cattle. Animal Science. 65 (2), pp. 199-207. https://doi.org/10.1017/S1357729800016507

Assigning pedigree beef performance records to contemporary groups taking account of within herd calving patterns

A - Papers appearing in refereed journals

Crump, R. E., Wray, N. R., Thompson, R. and Simm, G. R. 1997. Assigning pedigree beef performance records to contemporary groups taking account of within herd calving patterns. Animal Science. 65 (2), pp. 193-198. https://doi.org/10.1017/S1357729800016490

Optimal weighting of information in marker-assisted selection

A - Papers appearing in refereed journals

Whittaker, J. C., Haley, C. S. and Thompson, R. 1997. Optimal weighting of information in marker-assisted selection. Genetics Research. 69 (2), pp. 137-144. https://doi.org/10.1017/S0016672397002711

Models to estimate maternal effects for juvenile body weight in broiler chickens

A - Papers appearing in refereed journals

Koerhuis, A. N. M. and Thompson, R. 1997. Models to estimate maternal effects for juvenile body weight in broiler chickens. Genetics Selection Evolution. 29, pp. 225-249. https://doi.org/10.1186/1297-9686-29-2-225

Likelihood ratio tests for fixed model terms using residual maximum likelihood

A - Papers appearing in refereed journals

Welham, S. J. and Thompson, R. 1997. Likelihood ratio tests for fixed model terms using residual maximum likelihood. Journal of the Royal Statistical Society, Series B (Statistical Methodology). 59 (3), pp. 701-714. https://doi.org/10.1111/1467-9868.00092

Gibbs sampling, adaptive rejection sampling and robustness to prior specification for a mixed linear model

A - Papers appearing in refereed journals

Theobald, C. M., Firat, M. Z. and Thompson, R. 1997. Gibbs sampling, adaptive rejection sampling and robustness to prior specification for a mixed linear model. Genetics Selection Evolution. 29 (1), pp. 57-72. https://doi.org/10.1186/1297-9686-29-1-57

Residual maximum likelihood estimation of (Co) variance components in multivariate mixed linear models using average information

A - Papers appearing in refereed journals

Jensen, J., Mantysaari, E. A., Madsen, P. and Thompson, R. 1997. Residual maximum likelihood estimation of (Co) variance components in multivariate mixed linear models using average information. Journal of the Indian Society of Agricultural Statistics. 49, pp. 215-236.

Comparative performance of British hill sheep breeds and crosses

A - Papers appearing in refereed journals

Al-Nakib, F. M. S., Bateman, N., Findlay, R. H., Smith, C. and Thompson, R. 1997. Comparative performance of British hill sheep breeds and crosses. The Journal of Agricultural Science. 128 (2), pp. 199-206. https://doi.org/10.1017/S0021859696003991

Genstat 5 Release 3.2 Command Language Manual

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Harding, S. A., Murray, D. A., Morgan, G. W., Todd, A. D., Thompson, R., Tunnicliffe Wilson, G., Webster, R. J., Welham, S. J. and White, Robin P. 1996. Genstat 5 Release 3.2 Command Language Manual. Numerical Algorithms Group, Oxford.

Limousin national sire and dam summary

D1 - Technical reports: non-confidential

Bridge, P., Brown, C. M., Guy, D. R., Weigleb, B., Crump, R. E., Simm, G., Findlay, R. M., Nicholson, P. and Thompson, R. 1996. Limousin national sire and dam summary. Signet, Milton Keynes.

Charolais national sire and dam summary

D1 - Technical reports: non-confidential

Bridge, P., Brown, C. M., Guy, D. R., Weigleb, B., Crump, R. E., Simm, G., Findlay, R. M., Nicholson, P. and Thompson, R. 1996. Charolais national sire and dam summary. Signet, Milton Keynes.

Blonde d'Aquitane national sire and dam summary

D1 - Technical reports: non-confidential

Bridge, P., Brown, C. M., Guy, D. R., Weigleb, B., Crump, R. E., Simm, G., Findlay, R. M., Nicholson, P. and Thompson, R. 1996. Blonde d'Aquitane national sire and dam summary. Signet, Milton Keynes.

Aberdeen Angus national sire and dam summary

D1 - Technical reports: non-confidential

Bridge, P., Brown, C. M., Guy, D. R., Weigleb, B., Crump, R. E., Simm, G., Findlay, R. M., Nicholson, P. and Thompson, R. 1996. Aberdeen Angus national sire and dam summary. Signet, Milton Keynes.

On the mapping of QTL by regression of phenotype on marker-type

A - Papers appearing in refereed journals

Whittaker, J. C., Thompson, R. and Visscher, P. M. 1996. On the mapping of QTL by regression of phenotype on marker-type. Heredity. 77, pp. 23-32. https://doi.org/10.1038/hdy.1996.104

Confidence intervals in QTL mapping by bootstrapping

A - Papers appearing in refereed journals

Visscher, P. M., Thompson, R. and Haley, C. S. 1996. Confidence intervals in QTL mapping by bootstrapping. Genetics. 143 (2), pp. 1013-1020.

Marker-assisted introgression in backcross breeding programs

A - Papers appearing in refereed journals

Visscher, P. M., Haley, C. S. and Thompson, R. 1996. Marker-assisted introgression in backcross breeding programs. Genetics. 144 (4), pp. 1923-1932.

Analysis of cereal variety trials

C1 - Edited contributions to conferences/learned societies

Thompson, R. 1996. Analysis of cereal variety trials. Williams, D. and Connolly, J. (ed.) Proceedings 7th HARMA Workshop, Dublin, 8 November 1996 . pp. 7-10

Model building in animal breeding

C1 - Edited contributions to conferences/learned societies

Thompson, R. and Crump, R. E. 1996. Model building in animal breeding. Stein, A., Schotman, P. J. and Penningdevries, F. W. T. (ed.) Models in action (Quantitative approaches in systems analysis no. 6) . AB-DLO Research Institute for Agrobiology and Soil Fertility (AB-DLO) Wageningen. pp. 17-21

Investigation of bimodality in likelihoods and posterior densities

A - Papers appearing in refereed journals

Firat, M. Z. and Thompson, R. 1996. Investigation of bimodality in likelihoods and posterior densities. Journal of Statistical Computation and Simulation. 54 (4), pp. 379-386. https://doi.org/10.1080/00949659608811741

The analysis of the NSW wheat variety database. II. Variance component estimation

A - Papers appearing in refereed journals

Cullis, B. R., Thomson, F. M., Fisher, J. A., Gilmour, A. R. and Thompson, R. 1996. The analysis of the NSW wheat variety database. II. Variance component estimation. Theoretical and Applied Genetics. 92 (1), pp. 28-39. https://doi.org/10.1007/BF00222948

The analysis of the NSW wheat variety database. I. Modelling trial error variance

A - Papers appearing in refereed journals

Cullis, B. R., Thomson, F. M., Fisher, J. A., Gilmour, A. R. and Thompson, R. 1996. The analysis of the NSW wheat variety database. I. Modelling trial error variance. Theoretical and Applied Genetics. 92 (1), pp. 21-27. https://doi.org/10.1007/BF00222947

Genstat 3[3] Procedure Library

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1996. Genstat 3[3] Procedure Library. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3.2 version for PC Windows and DOS

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1996. Genstat 5 Release 3.2 version for PC Windows and DOS. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3.2 version for Vax VMS

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1996. Genstat 5 Release 3.2 version for Vax VMS. Numerical Algorithms Group, Oxford.

Genstat 5 for Windows reference manual supplement

D1 - Technical reports: non-confidential

Payne, R. W., Lane, P. W., Baird, D. B., Gilmour, A. R., Harding, S. A., Morgan, G. W., Murray, D. A., Thompson, R., Todd, A. D., Tunnicliffe Wilson, G., Webster, R. and Welham, S. J. 1995. Genstat 5 for Windows reference manual supplement. Oxford Numerical Algorithms Group.

Genstat 3[2] Procedure Library

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1995. Genstat 3[2] Procedure Library. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3.1 version for Hewlatt Packard 9000 Series 700

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1995. Genstat 5 Release 3.1 version for Hewlatt Packard 9000 Series 700. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3.1 version for Dec Alpha AXP OSF/1

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1995. Genstat 5 Release 3.1 version for Dec Alpha AXP OSF/1. Numerical Algorithms Group, Oxford.

Genstat for Windows. Release 3.2 manual supplement

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Harding, S. A., Murray, D. A., Morgan, G. W., Todd, A. D., Thompson, R., Tunnicliffe Wilson, G., Webster, R., Welham, S. J. and White, Robin P. 1995. Genstat for Windows. Release 3.2 manual supplement. Numerical Algorithms Group, Oxford.

Genstat for Windows reference summary

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Harding, S. A., Murray, D. A., Morgan, G. W., Todd, A. D., Thompson, R., Tunnicliffe Wilson, G., Webster, R., Welham, S. J. and White, Robin P. 1995. Genstat for Windows reference summary. Numerical Algorithms Group, Oxford.

Genstat 5 release 3.2 reference summary

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Harding, S. A., Murray, D. A., Morgan, G. W., Todd, A. D., Thompson, R., Tunnicliffe Wilson, G., Webster, R., Welham, S. J. and White, Robin P. 1995. Genstat 5 release 3.2 reference summary. Oxford Numerical Algorithms Group.

Genstat 5 release 3.2 manual supplement

E - Books edited/written by staff member, alone/with others

Payne, R. W., Lane, P. W., Baird, D. B., Harding, S. A., Murray, D. A., Morgan, G. W., Todd, A. D., Thompson, R., Tunnicliffe Wilson, G., Webster, R., Welham, S. J. and White, Robin P. 1995. Genstat 5 release 3.2 manual supplement. Numerical Algorithms Group, Oxford.

Genstat 3[1] Procedure Library

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1994. Genstat 3[1] Procedure Library. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3.1 version for Dec Alpha AXP OpenVMS

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1994. Genstat 5 Release 3.1 version for Dec Alpha AXP OpenVMS. Numerical Algorithms Group, Oxford.

Genstat5 Release 3.1 version for Sun 4 Solaris

J - Computer programs

Pyne, R., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1994. Genstat5 Release 3.1 version for Sun 4 Solaris. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3.1 version for Sun 4 SunOS

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1994. Genstat 5 Release 3.1 version for Sun 4 SunOS. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3.1. Version for PC DOS

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1994. Genstat 5 Release 3.1. Version for PC DOS. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3.1. Vax VMS version

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1994. Genstat 5 Release 3.1. Vax VMS version. Numerical Algorithms Group, Oxford.

Comparisons of some GLMM estimators for a simple binomial model

G - Articles in popular magazines and other technical publications

Waddington, D., Welham, S. J., Gilmour, A. R. and Thompson, R. 1994. Comparisons of some GLMM estimators for a simple binomial model. Genstat newsletter. 30, pp. 13-24.

Genstat 2[3] Procedure Library

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1993. Genstat 2[3] Procedure Library. Numerical Algorithms Group, Oxford.

Genstat 5 Release 2.2. Student version for IBM XT/AT and compatible PCs

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1993. Genstat 5 Release 2.2. Student version for IBM XT/AT and compatible PCs. Numerical Algorithms Group, Oxford.

Genstat 5 Release 3 reference manual

D1 - Technical reports: non-confidential

Payne, R. W., Lane, P. W., Digby, P. G. N., Harding, S. A., Leech, P. K., Morgan, G. W., Todd, A. D., Thompson, R., Tunnicliffe Wilson, G., Welham, S. J. and White, Robin P. 1993. Genstat 5 Release 3 reference manual. Clarendon Press, Oxford.

Genstat 5 Release 3 reference summary

D1 - Technical reports: non-confidential

Payne, R. W., Lane, P. W., Digby, P. G. N., Harding, S. A., Leech, P. K., Morgan, G. W., Todd, A. D., Thompson, R., Tunnicliffe Wilson, G., Welham, S. J. and White, Robin P. 1993. Genstat 5 Release 3 reference summary. Numerical Algorithms Group, Oxford.

Genstat 5 Release 2.2 (implementation for Silicon Graphics)

J - Computer programs

Payne, R. W., Lane, P., Harding, S., Murray, D., Thompson, R., Todd, A. and Welham, S. J. 1992. Genstat 5 Release 2.2 (implementation for Silicon Graphics). Numerical Algorithms Group, Oxford.

Analysis of HMW glutenin subunits encoded by chromosome 1A of bread wheat (Triticum aestivum L.) indicates quantitative effects on grain quality

A - Papers appearing in refereed journals

Halford, N. G., Field, J. M., Blair, H., Urwin, P., Moore, K., Robert, L., Thompson, R., Flavell, R. B., Tatham, A. S. and Shewry, P. R. 1992. Analysis of HMW glutenin subunits encoded by chromosome 1A of bread wheat (Triticum aestivum L.) indicates quantitative effects on grain quality. Theoretical and Applied Genetics. 83 (3), pp. 373-378. https://doi.org/10.1007/BF00224285

REML — a program for the analysis of non-orthogonal data by restricted maximum likelihood

C1 - Edited contributions to conferences/learned societies

Robinson, D. L., Thompson, R. and Digby, P. G. N. 1982. REML — a program for the analysis of non-orthogonal data by restricted maximum likelihood. Compstat 1982, part II (supplement). Vienna, Austria Springer.

Recovery of inter-block information when clock sizes are unequal

A - Papers appearing in refereed journals

Patterson, H. D. and Thompson, R. 1971. Recovery of inter-block information when clock sizes are unequal. Biometrika. 58 (3), pp. 545-554.