Phylogenetic position of Melampsora in rust fungi inferred from ribosomal DNA sequences

Bayon, C. and Ruiz, C. 2005. Phylogenetic position of Melampsora in rust fungi inferred from ribosomal DNA sequences. in: Pei, M. H. and Mccracken, A. R. (ed.) Rust diseases of willow and poplar CABI International, Wallingford, Oxon (CABI). pp. 1-9

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Ndreca, B., Huttly, A. K., Bibi, S., Bayon, C., Lund, G., Ham, J., Alarcon-Reverte, R., Addy, J., Tarkowská, D., Pearce, S., Hedden, P., Thomas, S. G. and Phillips, A. L. 2024. Stacked mutations in wheat homologues of rice SEMI-DWARF1 confer a novel semi-dwarf phenotype. BMC Plant Biology. 24, p. 384. https://doi.org/10.1186/s12870-024-05098-1

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Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen

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Induction of distinct plant cell death programs by secreted proteins from the wheat pathogen Zymoseptoria tritici

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Welch, T., Bayon, C., Rudd, J. J., Kanyuka, K. and Kettles, G. J. 2022. Induction of distinct plant cell death programs by secreted proteins from the wheat pathogen Zymoseptoria tritici. Scientific Reports. 12, p. 17880. https://doi.org/10.1038/s41598-022-22660-9

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Kettles, G. J., Hofinger, B. J., Hu, P., Bayon, C., Rudd, J. J., Balmer, D., Courbot, M., Hammond-Kosack, K. E., Scalliet, G. and Kanyuka, K. 2019. sRNA profiling combined with gene function analysis reveals a lack of evidence for cross-kingdom RNAi in the wheat – Zymoseptoria tritici pathosystem. Frontiers in Plant Science. 10 (892). https://doi.org/10.3389/fpls.2019.00892

Analysis of small RNAs in the Zymoseptoria tritici – wheat interaction

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Analysis of small RNA silencing in Zymoseptoria tritici – wheat interactions

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Kettles, G. J., Hofinger, B. J., Hu, P., Bayon, C., Rudd, J. J., Balmer, D., Courbot, M., Hammond-Kosack, K. E., Scalliet, G. and Kanyuka, K. 2018. Analysis of small RNA silencing in Zymoseptoria tritici – wheat interactions. bioRxiv. https://doi.org/10.1101/501650

Characterization of an antimicrobial and phytotoxic ribonuclease secreted by the fungal wheat pathogen Zymoseptoria tritici

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Kettles, G. J., Bayon, C., Sparks, C. A., Canning, G., Kanyuka, K. and Rudd, J. J. 2018. Characterization of an antimicrobial and phytotoxic ribonuclease secreted by the fungal wheat pathogen Zymoseptoria tritici. New Phytologist. 217 (1), pp. 320-331. https://doi.org/10.1111/nph.14786

Phenotypic, comparative genomic and transcriptomic analysis of recently collected European Zymoseptoria tritici strains

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Apoplastic recognition of multiple candidate effectors from the wheat pathogen Zymoseptoria tritici in the nonhost plant Nicotiana benthamiana

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Kettles, G. J., Bayon, C., Canning, G., Rudd, J. J. and Kanyuka, K. 2017. Apoplastic recognition of multiple candidate effectors from the wheat pathogen Zymoseptoria tritici in the nonhost plant Nicotiana benthamiana. New Phytologist. 213 (1), pp. 338-350. https://doi.org/10.1111/nph.14215

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Fraaije, B. A., Bayon, C., Atkins, S., Cools, H. J., Lucas, J. A. and Fraaije, M. W. 2012. Risk assessment studies on succinate dehydrogenase inhibitors, the new weapons in the battle to control Septoria leaf blotch in wheat. Molecular Plant Pathology. 13 (3), pp. 263-275. https://doi.org/10.1111/j.1364-3703.2011.00746.x

Genetic mapping of rust resistance loci in biomass willow

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Hanley, S. J., Pei, M. H., Powers, S. J., Ruiz, C., Mallott, M. D., Barker, J. H. A. and Karp, A. 2011. Genetic mapping of rust resistance loci in biomass willow. Tree Genetics & Genomes. 7 (3), pp. 597-608. https://doi.org/10.1007/s11295-010-0359-x

Succinate dehydrogenase inhibitor resistance risk assessment studies on Mycosphaerella graminicola the causal agent of septoria leaf blotch

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Bayon, C., Fraaije, M. W., Cools, H. J., Rogers, S. L., Lucas, J. A. and Fraaije, B. A. 2010. Succinate dehydrogenase inhibitor resistance risk assessment studies on Mycosphaerella graminicola the causal agent of septoria leaf blotch.

Mendelian inheritance of rust resistance to Melampsora larici-epitea in crosses between Salix sachalinensis and S. viminalis

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Pei, M. H., Ruiz, C., Shield, I. F., Macalpine, W. J., Lindegaard, K., Bayon, C. and Karp, A. 2010. Mendelian inheritance of rust resistance to Melampsora larici-epitea in crosses between Salix sachalinensis and S. viminalis. Plant Pathology. 59 (5), pp. 862-872. https://doi.org/10.1111/j.1365-3059.2010.02317.x

Effects of DMI fungicides on selection of CYP51 variants in UK populations of Mycosphaerella graminicola

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Fraaije, B. A., Rogers, S., Bayon, C., Cools, H. J. and Lucas, J. A. 2010. Effects of DMI fungicides on selection of CYP51 variants in UK populations of Mycosphaerella graminicola. Abstracts 16th International Reinhardsbrunn Symposium: Modern Fungicides and Antifungal Compounds, Friedrichroda, 25-29 April 2010 . pp. 84

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DArT markers: diversity analyses, genomes comparison, mapping and integration with SSR markers in Triticum monococcum

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Jing, H-C., Bayon, C., Kanyuka, K., Berry, S., Wenzl, P., Huttner, E., Kilian, A. and Hammond-Kosack, K. E. 2009. DArT markers: diversity analyses, genomes comparison, mapping and integration with SSR markers in Triticum monococcum. BMC Genomics. 10, p. 458 (17pp). https://doi.org/10.1186/1471-2164-10-458

Genetic structure and population dynamics of a heteroecious plant pathogen Melampsora larici-epitea in short-rotation coppice willow plantations

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Bayon, C., Pei, M. H., Ruiz, C., Hunter, T., Karp, A. and Tubby, I. 2009. Genetic structure and population dynamics of a heteroecious plant pathogen Melampsora larici-epitea in short-rotation coppice willow plantations. Molecular Ecology. 18, pp. 3006-3019. https://doi.org/10.1111/j.1365-294X.2009.04255.x

Mutation discovery for crop improvement

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Parry, M. A. J., Madgwick, P. J., Bayon, C., Tearall, K., Hernandez-Lopez, A., Baudo, M., Rakszegi, M., Hamada, W., Al-Yassin, A., Ouabbou, H., Labhilili, M. and Phillips, A. L. 2009. Mutation discovery for crop improvement. Journal of Experimental Botany. 60 (10), pp. 2817-2825. https://doi.org/10.1093/jxb/erp189

TILLING for improved crop performance under stress conditions

C1 - Edited contributions to conferences/learned societies

Parry, M. A. J., Madgwick, P. J., Bayon, C., Habash, D., Baudo, M., Tuberosa, R., Bort, J., Ben Haj Salah, H., Slafer, G., Al-Yassin, A., Ouabbou, H., Labihili, M., Natchit, M. and Phillips, A. L. 2008. TILLING for improved crop performance under stress conditions. Effects of Climate Change on Plants: Implications for Agriculture. Aspects of Applied Biology 88 . Association of Applied Biologists (AAB) Wellesbourne Warwick . pp. 111

Rust resistance of some varieties and recently bred genotypes of biomass willows

A - Papers appearing in refereed journals

Pei, M. H., Lindegaard, K., Ruiz, C. and Bayon, C. 2008. Rust resistance of some varieties and recently bred genotypes of biomass willows. Biomass & Bioenergy. 32, pp. 453-459. https://doi.org/10.1016/j.biombioe.2007.11.002

Triticum monococcum as a reference species for wheat genetics and genomics

C2 - Non-edited contributions to conferences

Jing, H-C., Bayon, C., Gutteridge, R., Kornyukhin, D., Kanyuka, K., Orford, S., Zlatska, A., Mitrofanova, O. P., Phillips, A. L. and Hammond-Kosack, K. E. 2007. Triticum monococcum as a reference species for wheat genetics and genomics. Abstracts 4th UK Small Grain Cereal Genetics and Genomics Workshop: From Genes to Traits, Cambridge, 14-16 March 2007 .

Genetic structure and spatial distribution of the mycoparasite Sphaerellopsis filum on Melampsora larici-epitea in a short-rotation coppice willow planting

A - Papers appearing in refereed journals

Bayon, C., Pei, M. H., Ruiz, C. and Hunter, T. 2007. Genetic structure and spatial distribution of the mycoparasite Sphaerellopsis filum on Melampsora larici-epitea in a short-rotation coppice willow planting. Plant Pathology. 56 (4), pp. 616-623. https://doi.org/10.1111/j.1365-3059.2007.01606.x

Population structure of poplar rust Melampsora larici-populina in the UK inferred from AFLP

A - Papers appearing in refereed journals

Pei, M. H., Bayon, C., Ruiz, C. and Tubby, I. 2007. Population structure of poplar rust Melampsora larici-populina in the UK inferred from AFLP. Plant Pathology. 56 (3), pp. 472-479. https://doi.org/10.1111/j.1365-3059.2007.01570.x

Genetic diversity in the mycoparasite Sphaerellopsis filum inferred from AFLP analysis and ITS-5.8S sequences

A - Papers appearing in refereed journals

Bayon, C., Yuan, Z-W., Ruiz, C., Liesebach, M. and Pei, M. H. 2006. Genetic diversity in the mycoparasite Sphaerellopsis filum inferred from AFLP analysis and ITS-5.8S sequences. Mycological Research. 110, pp. 1200-1206. https://doi.org/10.1016/j.mycres.2006.06.001

Getting the most out of fluorescent amplified fragment length polymorphism

A - Papers appearing in refereed journals

Trybush, S., Hanley, S. J., Cho, K-H., Jahodova, S., Grimmer, M., Emelianov, I., Bayon, C. and Karp, A. 2006. Getting the most out of fluorescent amplified fragment length polymorphism. Canadian Journal Of Botany. 84 (8), pp. 1347-1354. https://doi.org/10.1139/B06-096

Phylogenetic relationships in some Melampsora rusts on Salicaceae assessed using rDNA sequence information

A - Papers appearing in refereed journals

Pei, M. H., Bayon, C. and Ruiz, C. 2005. Phylogenetic relationships in some Melampsora rusts on Salicaceae assessed using rDNA sequence information. Mycological Research. 109 (4), pp. 401-409. https://doi.org/10.1017/S0953756205002479

Pathogenic variation in poplar rust Melampsora larici-populina from England

A - Papers appearing in refereed journals

Pei, M. H., Ruiz, C., Bayon, C., Hunter, T. and Lonsdale, D. 2005. Pathogenic variation in poplar rust Melampsora larici-populina from England. European Journal of Plant Pathology. 111, pp. 147-155.

Rust resistance in Salix to Melampsora larici-epitea

A - Papers appearing in refereed journals

Pei, M. H., Ruiz, C., Bayon, C. and Hunter, T. 2004. Rust resistance in Salix to Melampsora larici-epitea. Plant Pathology. 53 (6), pp. 770-779. https://doi.org/10.1111/j.1365-3059.2004.01100.x

Rust resistance in Salix induced by inoculations with avirulent and virulent isolates of Melampsora larici-epitea

A - Papers appearing in refereed journals

Pei, M. H., Ruiz, C., Hunter, T. and Bayon, C. 2003. Rust resistance in Salix induced by inoculations with avirulent and virulent isolates of Melampsora larici-epitea. Forest Pathology. 33 (6), pp. 383-394. https://doi.org/10.1046/j.1437-4781.2003.00338.x

Quantitative inoculations of poplars with Melampsora larici-populina

A - Papers appearing in refereed journals

Pei, M. H., Ruiz, C., Harris, J. and Hunter, T. 2003. Quantitative inoculations of poplars with Melampsora larici-populina. European Journal of Plant Pathology. 109, pp. 269-276.

Quantitative inoculation of willow rust Melampsora larici-epitea with the mycoparasite Sphaerellopsis filum (teleomorph Eudarluca caricis )

A - Papers appearing in refereed journals

Pei, M. H., Hunter, T., Ruiz, C., Bayon, C. and Harris, J. 2003. Quantitative inoculation of willow rust Melampsora larici-epitea with the mycoparasite Sphaerellopsis filum (teleomorph Eudarluca caricis ). Mycological Research. 107, pp. 57-63.

Quantitative relationships between inoculum of Melampsora larici-epitea and corresponding disease on Salix

A - Papers appearing in refereed journals

Pei, M. H., Ruiz, C., Hunter, T., Arnold, G. M. and Bayon, C. 2002. Quantitative relationships between inoculum of Melampsora larici-epitea and corresponding disease on Salix. Plant Pathology. 51, pp. 443-453.

Genetic variation in Melampsora larici-epitea on biomass willows assessed using AFLP

A - Papers appearing in refereed journals

Pei, M. H., Bayon, C., Ruiz, C., Yuan, Z-W. and Hunter, T. 2002. Genetic variation in Melampsora larici-epitea on biomass willows assessed using AFLP. European Journal of Plant Pathology. 108, pp. 229-236.

Preliminary studies of inheritance of rust resistance in biomass willows

C1 - Edited contributions to conferences/learned societies

Pei, M. H., Lindegaard, K. N., Hunter, T. and Ruiz, C. 2001. Preliminary studies of inheritance of rust resistance in biomass willows. Biomass and Energy Crops II. Aspects of Applied Biology 65 . pp. 281-288

Heterogeneous nature of a 'new' pathotype of Melampsora rust on Salix revealed by AFLP

A - Papers appearing in refereed journals

Pei, M. H., Yuan, Z-W., Hunter, T. and Ruiz, C. 2000. Heterogeneous nature of a 'new' pathotype of Melampsora rust on Salix revealed by AFLP. European Journal of Plant Pathology. 106, pp. 771-779.

AFLP evidence of the distinctive patterns of life-cycle in two forms of Melampsora rust on Salix viminalis

A - Papers appearing in refereed journals

Pei, M. H. and Ruiz, C. 2000. AFLP evidence of the distinctive patterns of life-cycle in two forms of Melampsora rust on Salix viminalis. Mycological Research. 104, pp. 937-942.