Sensing the physical and nutritional status of the root environment in the field: a review of progress and opportunities

Clark, L. J., Gowing, D. J. G., Lark, R. M., Leeds-Harrison, P. B., Miller, A. J., Wells, D. M., Whalley, W. R. and Whitmore, A. P. 2005. Sensing the physical and nutritional status of the root environment in the field: a review of progress and opportunities. The Journal of Agricultural Science. 143, pp. 347-358. https://doi.org/10.1017/S0021859605005253

Related outputs

The pore-rhizosheath shapes maize root architecture by enhancing root distribution in macropores

A - Papers appearing in refereed journals

Liu, L., Qin, S., Whalley, W. R., Zhou, H., Ren, T. and Gao, W. 2024. The pore-rhizosheath shapes maize root architecture by enhancing root distribution in macropores. Plant, Cell and Environment. pp. 1-12. https://doi.org/10.1111/pce.14915

An agrogeophysical modelling framework for the detection of soil compaction spatial variability due to grazing using field-scale electromagnetic induction data.

A - Papers appearing in refereed journals

Romero-Ruiz, A., O'Leary, D., Daly, E., Tuohy, P., Milne, A. E., Coleman, K. and Whitmore, A. P. 2024. An agrogeophysical modelling framework for the detection of soil compaction spatial variability due to grazing using field-scale electromagnetic induction data. Soil Use and Management. 40 (2), p. e13039. https://doi.org/10.1111/sum.13039

Urine Se concentration poorly predicts plasma Se concentration at sub-district scales in Zimbabwe, limiting its value as a biomarker of population Se status

A - Papers appearing in refereed journals

Mutonhodza, B., Dembedza, M. P., Joy, E., Kangara, G., Njovo, H., Nyadzayo, T. K., Lark, R. M., Kalimbira, A. A., Bailey, E. H., Broadley, M., Matsungo, T. M. and Chopera, P. 2024. Urine Se concentration poorly predicts plasma Se concentration at sub-district scales in Zimbabwe, limiting its value as a biomarker of population Se status. Frontiers in Nutrition. p. 1288748. https://doi.org/10.3389/fnut.2024.1288748

Implications and impacts of aligning regional agriculture with a healthy diet

A - Papers appearing in refereed journals

Sharp, R., Bellamy, A. S., Clear, A., Finnigan, S. M., Furness, E., Meador, E., Metcalfe, H., Mills, S., Coleman, K., Whitmore, A. P. and Milne, A. E. 2024. Implications and impacts of aligning regional agriculture with a healthy diet. Journal of Cleaner Production. p. 141375. https://doi.org/10.1016/j.jclepro.2024.141375

The effects of soil compaction on wheat seedling root growth are specific to soil texture and soil moisture status

A - Papers appearing in refereed journals

Yu, C., Mawodza, T., Atkinson, B. S., Atkinson, J. A., Sturrock, C. J., Whalley, W. R., Hawkesford, M. J., Cooper, H., Zhang, X., Zhou, H. and Mooney, S. J. 2024. The effects of soil compaction on wheat seedling root growth are specific to soil texture and soil moisture status. Rhizosphere. 29, p. 100838. https://doi.org/10.1016/j.rhisph.2023.100838

Root phenotyping and root water uptake calculation using soil water contents measured in a winter wheat field

A - Papers appearing in refereed journals

Huang, Z., Zhang, X., Ashton, R. W., Hawkesford, M. J. and Whalley, W. R. 2023. Root phenotyping and root water uptake calculation using soil water contents measured in a winter wheat field. Agricultural Water Management. 290, p. 108607. https://doi.org/10.1016/j.agwat.2023.108607

Trade-offs constrain the success of glyphosate-free farming.

A - Papers appearing in refereed journals

Metcalfe, H., Storkey, J., Hull, R. I., Bullock, J. M., Whitmore, A. P., Sharp, R. and Milne, A. E. 2023. Trade-offs constrain the success of glyphosate-free farming. Scientific Reports. 14, p. 8001. https://doi.org/10.1038/s41598-024-58183-8

Landscape and Micronutrient Fertilizer Effect on Agro-Fortified Wheat and Teff Grain Nutrient Concentration in Western Amhara.

A - Papers appearing in refereed journals

Kangara, G., Amede, T., Bailey, E. H., Wilson, L., Mossa, A. W., Tirfessa, D., Desta, M. K., Asrat, T. G., Agegnehu, G., Sida, T. S., Desta, G., Amare, T., Alemayehu, B., Haefele, S. M., Lark, R. M., Broadley, M. and Gameda, S. 2023. Landscape and Micronutrient Fertilizer Effect on Agro-Fortified Wheat and Teff Grain Nutrient Concentration in Western Amhara. Agronomy. 13 (10), p. 2598. https://doi.org/10.3390/agronomy13102598

Soil structure has a greater effect on the rooting of wheat (Triticum aestivum L.) than nitrogen fertilisation rate or genotype.

A - Papers appearing in refereed journals

Mawodza, T., Zhou, H., Atkinson, B. S., Atkinson, J. A., Sturrock, C. J., Riche, A. B., Whalley, W. R., Hawkesford, M. J., Cooper, H. V. and Mooney, S. J. 2023. Soil structure has a greater effect on the rooting of wheat (Triticum aestivum L.) than nitrogen fertilisation rate or genotype. Rhizosphere. 27 (Sept), p. 100770. https://doi.org/10.1016/j.rhisph.2023.100770

Soil structure has a greater effect on the rooting of wheat (Triticum aestivum L.) than nitrogen fertilisation rate or genotype

A - Papers appearing in refereed journals

Mawodza, T., Zhou, H., Atkinson, B. S., Atkinson, J. A., Sturrock, C. J., Riche, A. B., Whalley, W. R., Hawkesford, M. J., Cooper, H. and Mooney, S. J. 2023. Soil structure has a greater effect on the rooting of wheat (Triticum aestivum L.) than nitrogen fertilisation rate or genotype. Rhizosphere. 27, p. 100770. https://doi.org/10.1016/j.rhisph.2023.100770

Wheat and teff grain mineral micronutrient concentration and field data from GeoNutrition on-farm field experiments in Western Amhara region, Ethiopia

N - Datasets

Manzeke-Kangara, M.G., Amede, T., Bailey, E.H., Wilson, L., Mossa, A.W., Tirfessa, D., Kebede-Desta, M., Gashaw-Asrat, T., Agegnehu, G., Sida, T.S., Desta, G., Amare, T., Alemayehu, B., Haefele, S. M., Lark, R. M., Broadley, M. and Gameda, S. 2023. Wheat and teff grain mineral micronutrient concentration and field data from GeoNutrition on-farm field experiments in Western Amhara region, Ethiopia. Rothamsted Research. https://doi.org/10.23637/rothamsted.98y40

Micronutrients and socio-demographic factors were major predictors of anaemia among the Ethiopian population

A - Papers appearing in refereed journals

Belay, A., Joy, E., Lark, R. M., Ander, E. L., Young, S. D., Bailey, E. H., Broadley, M. and Gashu, D. 2023. Micronutrients and socio-demographic factors were major predictors of anaemia among the Ethiopian population. British Journal Of Nutrition. 130 (12), p. 2123–2135. https://doi.org/10.1017/S0007114523001472

A pilot survey of selenium status and its geospatial variation among children and women in three rural districts of Zimbabwe

A - Papers appearing in refereed journals

Mutonhodza, B., Chagumaira, C., Dembedza, M. P., Joy, E., Manzeke-Kangara, M. G., Njovo, H., Nyadzayo, T. K., Lark, R. M., Kalimbira, A. A., Bailey, E. H., Broadley, M. R., Matsungo, T. M. and Chopera, P. 2023. A pilot survey of selenium status and its geospatial variation among children and women in three rural districts of Zimbabwe. Frontiers in Nutrition. 10, p. 1235113. https://doi.org/10.3389/fnut.2023.1235113

Do agronomic approaches aligned to regenerative agriculture improve the micronutrient concentrations of edible portions of crops? A scoping review of evidence

A - Papers appearing in refereed journals

Kangara, G., Joy, E. J. M., Lark, R. M., Redfern, S., Eilander, A. and Broadley, M. 2023. Do agronomic approaches aligned to regenerative agriculture improve the micronutrient concentrations of edible portions of crops? A scoping review of evidence. Frontiers in Nutrition. 10, p. 1078667. https://doi.org/10.3389/fnut.2023.1078667

Grazing livestock move by Levy walks - Implications for soil health and environment

A - Papers appearing in refereed journals

Romero-Ruiz, A., Rivero, M. J., Milne, A. E., Morgan, S., De-Meo-Filho, P., Pulley, S., Segura, C., Harris, P., Lee, M. R. F., Coleman, K., Cardenas, L. M. and Whitmore, A. P. 2023. Grazing livestock move by Levy walks - Implications for soil health and environment. Journal of Environmental Management. 345 (1), p. 118835. https://doi.org/10.1016/j.jenvman.2023.118835

Does no-tillage mitigate the negative effects of harvest compaction on soil pore characteristics in Northeast China?

A - Papers appearing in refereed journals

Tian, M., Whalley, W. R., Zhou, H., Ren, T. and Gao, W. 2023. Does no-tillage mitigate the negative effects of harvest compaction on soil pore characteristics in Northeast China? Soil & Tillage Research. 233, p. 105787. https://doi.org/10.1016/j.still.2023.105787

Genotypic Response of Finger Millet to Zinc and Iron Agronomic Biofortification, Location and Slope Position towards Yield

A - Papers appearing in refereed journals

Teklu, D., Gashu, D., Joy, E., Lark, R. M., Bailey, E., Wilson, L., Amede, T. and Broadley, M. 2023. Genotypic Response of Finger Millet to Zinc and Iron Agronomic Biofortification, Location and Slope Position towards Yield. Agronomy. 13 (6), p. 1452. https://doi.org/10.3390/agronomy13061452

Impact of zinc and iron agronomic biofortification on grain mineral concentration of finger millet varieties as affected by location and slope

A - Papers appearing in refereed journals

Teklu, D., Gashu, D., Joy, E., Lark, R. M., Bailey, E. H., Wilson, L., Amede, T. and Broadley, M. 2023. Impact of zinc and iron agronomic biofortification on grain mineral concentration of finger millet varieties as affected by location and slope. Frontiers in Nutrition. 10 (5 May), p. 1159833. https://doi.org/10.3389/fnut.2023.1159833

Changes in soil surface properties under simulated rainfall and the effect of surface roughness on runoff, infiltration and soil loss

A - Papers appearing in refereed journals

Bahddou, S., Otten, W., Whalley, W. R., Shin, H., El Gharous, M. and Rickson, R. J. 2023. Changes in soil surface properties under simulated rainfall and the effect of surface roughness on runoff, infiltration and soil loss. Geoderma. 431, p. 116341. https://doi.org/10.1016/j.geoderma.2023.116341

Effect of different organic amendments on actual and achievable yields in a cereal-based cropping system

A - Papers appearing in refereed journals

Albano, X., Whitmore, A. P., Sakrabani, O., Thomas, C. L., Sizmur, T., Ritz, K., Harris, J., Pawlett, M., Watts, C. W. and Haefele, S. M. 2023. Effect of different organic amendments on actual and achievable yields in a cereal-based cropping system. Journal of Soil Science and Plant Nutrition. 23, pp. 2122-2137. https://doi.org/10.1007/s42729-023-01167-w

Modelling changes in soil structure caused by livestock treading

A - Papers appearing in refereed journals

Romero-Ruiz, A., Monaghan. R, Milne, A. E., Coleman, K., Cardenas, L. M., Segura, C. and Whitmore, A. P. 2023. Modelling changes in soil structure caused by livestock treading. Geoderma. 431, p. 116331. https://doi.org/10.1016/j.geoderma.2023.116331

Optimal control of organic matter applications

A - Papers appearing in refereed journals

Putelat, T. and Whitmore, A. P. 2023. Optimal control of organic matter applications . European Journal of Agronomy. 143, p. 126713. https://doi.org/10.1016/j.eja.2022.126713

Anemia in children aged 6-59 months was significantly associated with maternal anemia status in rural Zimbabwe.

A - Papers appearing in refereed journals

Mutonhodza, B., Dembedza, M. P., Lark, R. M., Joy, E. J. M., Manzeke-Kangara, M. G., Njovo, H., Nyadzayo, T. K., Kalimbira, A. A., Bailey, E. H., Broadley, M., Matsungo, T. M. and Chopera, P. 2022. Anemia in children aged 6-59 months was significantly associated with maternal anemia status in rural Zimbabwe. Food Science and Nutrition. https://doi.org/10.1002/fsn3.3157

Selenium Concentration in Cattle Serum and Fodder from Two Areas in Ethiopia with Contrasting Human Selenium Concentration

A - Papers appearing in refereed journals

Hailu, K., Gashu, D., Joy, E., Alonso, S., Gizaw, S., Gameda, S., Ander, E. L., Bailey, E., Wilson, L., Lark, R. M., Kumssa, D. B. and Broadley, M. 2022. Selenium Concentration in Cattle Serum and Fodder from Two Areas in Ethiopia with Contrasting Human Selenium Concentration. Frontiers in Bioscience -Landmark. 27 (7), p. 200. https://doi.org/10.31083/j.fbl2707200

Linkages between soil, crop, livestock, and human selenium status in Sub-Saharan Africa: a scoping review.

A - Papers appearing in refereed journals

Mutonhodza, B., Joy, E., Bailey, E., Lark, R. M., Kangara, G., Broadley, M., Matsungo, T. M. and Chopera, P. 2022. Linkages between soil, crop, livestock, and human selenium status in Sub-Saharan Africa: a scoping review. International Journal of Food Science and Technology. 57 (10), pp. 6336-6349. https://doi.org/10.1111/ijfs.15979

Agronomic biofortification increases grain zinc concentration of maize grown under contrasting soil types in Malawi

A - Papers appearing in refereed journals

Botoman, L., Chimungu, J. G., Bailey, E. H., Munthali, M. W., Ander, E. L., Mossa, A., Young, S. D., Broadley, M., Lark, R. M. and Nalivata, P. C. 2022. Agronomic biofortification increases grain zinc concentration of maize grown under contrasting soil types in Malawi. Plant Direct. 6 (11), p. e458. https://doi.org/10.1002/pld3.458

Estimates of Dietary Mineral Micronutrient Supply from Staple Cereals in Ethiopia at a District Level

A - Papers appearing in refereed journals

Abdu, A. O., Kumssa, D. B., Joy, E., Groote, H. D., Lark, R. M., Broadley, M. and Gashu, D. 2022. Estimates of Dietary Mineral Micronutrient Supply from Staple Cereals in Ethiopia at a District Level. Nutrients. 14 (17), p. 3469. https://doi.org/10.3390/nu14173469

Decisions, uncertainty and spatial information

A - Papers appearing in refereed journals

Lark, R. M., Chagumaira, C. and Milne, A. E. 2022. Decisions, uncertainty and spatial information. Spatial Statistics. 50, p. 100619. https://doi.org/10.1016/j.spasta.2022.100619

Cereal grain mineral micronutrient and soil chemistry data from GeoNutrition surveys in Ethiopia and Malawi

A - Papers appearing in refereed journals

Kumssa, D. B., Mossa, A. W., Amede, T., Ander, E. L., Botoman, E. H. B., Chagumaira, C., Chimungu, J. G., Davies, K. G., Gameda, S., Haefele, S. M., Hailu, K., Joy, E. J. M., Lark, R. M., Ligowe, I. S., McGrath, S. P., Milne, A. E., Muleya, P., Munthal, M., Towett, E., Walsh, M. G., Wilson, L., D.Young, S., Haji, I. R., Broadley, M., Gashu, D. and Nalivata, P. C. 2022. Cereal grain mineral micronutrient and soil chemistry data from GeoNutrition surveys in Ethiopia and Malawi. Scientific Data. 9 (1), p. 443. https://doi.org/10.1038/s41597-022-01500-5

An overlooked mechanism underlying the attenuated temperature response of soil heterotrophic respiration

A - Papers appearing in refereed journals

Zhang, X., Whalley, P. A., Gregory, A. S., Whalley, W. R., Coleman, K., Neal, A. L., Mooney, S. J., Soga, K. and Illangasekare, T. H. 2022. An overlooked mechanism underlying the attenuated temperature response of soil heterotrophic respiration. Journal of the Royal Society Interface. 19 (192), p. 20220276. https://doi.org/10.1098/rsif.2022.0276

Sub-sampling a large physical soil archive for additional analyses to support spatial mapping; a pre-registered experiment in the Southern Nations, Nationalities, and Peoples Region (SNNPR) of Ethiopia

A - Papers appearing in refereed journals

Alemu, R., Gelaw, A. M., Gashu, D., Tafere, K., Mossa, A. W., Bailey, E. H., Masters, W. A., Broadley, M. and Lark, R. M. 2022. Sub-sampling a large physical soil archive for additional analyses to support spatial mapping; a pre-registered experiment in the Southern Nations, Nationalities, and Peoples Region (SNNPR) of Ethiopia. Geoderma. 424 (15 Oct), p. 116013. https://doi.org/10.1016/j.geoderma.2022.116013

Countering elevated CO2 induced Fe and Zn reduction in Arabidopsis seeds

A - Papers appearing in refereed journals

Sun, P., Isner, J., Coupel-Ledru, A., Zhang, Q., Pridgeon, A., He, Y., Menguer, P., Miller, A. J., Sanders, D., McGrath, S. P., Noothong, F., Liang, Y. and Hetherington, A. 2022. Countering elevated CO2 induced Fe and Zn reduction in Arabidopsis seeds. New Phytologist. 235 (5), pp. 1796-1806. https://doi.org/10.1111/nph.18290

Changes of soil structure under different tillage management assessed by bulk density, penetrometer resistance, water retention curve, least limiting water range and X-ray computed tomography

A - Papers appearing in refereed journals

Tian, M., Qin, S., Whalley, W. R., Zhou, H., Ren, T. and Gao, W. 2022. Changes of soil structure under different tillage management assessed by bulk density, penetrometer resistance, water retention curve, least limiting water range and X-ray computed tomography. Soil & Tillage Research. 221, p. 105420. https://doi.org/10.1016/j.still.2022.105420

Complementary protein extraction methods increase the identification of the Park Grass Experiment metaproteome

A - Papers appearing in refereed journals

Quinn, G. A., Abdelhameed, A., Banat, I. M., Berra, D., Doerr,S. H., Dudley, E., Francis, L. W., Gazze, S. A., Hallin, I., Matthews, G. P., Swain, M. T., Whalley, W. R. and Van Keulena, G. 2022. Complementary protein extraction methods increase the identification of the Park Grass Experiment metaproteome. Applied Soil Ecology. 173, p. 104388. https://doi.org/10.1016/j.apsoil.2022.104388

Soil and landscape factors influence geospatial variation in maize grain zinc concentration in Malawi

A - Papers appearing in refereed journals

Botoman, L., Chagumaira, C., Mossa, A. W., Amede, T., Ander, E. L., Bailey, E. H., Chimungu, J. G., Gameda, S., Gashu, D., Haefele, S. M., Joy, E. J. M., Kumssa, D. B., Ligowe, I. S., McGrath, S. P., Milne, A. E., Munthali, M., Towett, E., Walsh, M. G., Wilson, L., Young, S. D., Broadley, M. R., Lark, R. M. and Nalivata, P. C. 2022. Soil and landscape factors influence geospatial variation in maize grain zinc concentration in Malawi. Scientific Reports. 12, p. 7986. https://doi.org/10.1038/s41598-022-12014-w

Absence of a home‑field advantage within a short‑rotation arable cropping system

A - Papers appearing in refereed journals

Whitmore, A. P., Mortimer, S., Shu, X. and Sizmur, T. 2022. Absence of a home‑field advantage within a short‑rotation arable cropping system. Plant and Soil. https://doi.org/10.1007/s11104-022-05419-z

Mineral micronutrient status and spatial distribution among the Ethiopian population

A - Papers appearing in refereed journals

Belay, A., Gashu, D., Joy, E. J. M., Lark, R. M., Chagumaira, M. R. L., Zerfu, D., Ander, L. E., Young, S. D., Bailey, E. H. and Broadley, M. 2022. Mineral micronutrient status and spatial distribution among the Ethiopian population. British Journal Of Nutrition. 128 (11), pp. 2170-2180. https://doi.org/10.1017/S0007114522000319

Stakeholder interpretation of probabilistic representations of uncertainty in spatial information an example on the nutritional quality of staple

A - Papers appearing in refereed journals

Chagumaira, C., Nalivata, P. C., Chimungu, J. G., Gashu, D., Broadley, M., Milne, A. E. and Lark, R. M. 2022. Stakeholder interpretation of probabilistic representations of uncertainty in spatial information an example on the nutritional quality of staple. International Journal Of Geographical Information Science. 36 (12), pp. 2446-2472. https://doi.org/10.1080/13658816.2021.2020278

Exploring the effects of land management change on productivity, carbon and nutrient balance: Application of an Ensemble Modelling Approach to the upper River Taw observatory, UK

A - Papers appearing in refereed journals

Hassall, K. L., Coleman, K., Dixit, P., Granger, S. J., Zhang, Y., Sharp, R., Wu, L., Whitmore, A. P., Richter, G. M., Collins, A. L. and Milne, A. E. 2022. Exploring the effects of land management change on productivity, carbon and nutrient balance: Application of an Ensemble Modelling Approach to the upper River Taw observatory, UK. Science of the Total Environment. 824, p. 153824. https://doi.org/10.1016/j.scitotenv.2022.153824

Localized nutrient supply can facilitate root proliferation and increase nitrogen-use efficiency in compacted soil

A - Papers appearing in refereed journals

Wu, X., Li, H., Rengel, Z., Whalley, W. R., Li, H., Zhang, F., Shen, J. and Jin, K. 2022. Localized nutrient supply can facilitate root proliferation and increase nitrogen-use efficiency in compacted soil. Soil & Tillage Research. 215 (January), p. 105198. https://doi.org/10.1016/j.still.2021.105198

On the improved Brutsaert's model to estimate the soil water content by measuring P-wave and S-wave speeds: A commentary on Xu et al. (2020)

A - Papers appearing in refereed journals

Shin, H. C. and Whalley, W. R. 2021. On the improved Brutsaert's model to estimate the soil water content by measuring P-wave and S-wave speeds: A commentary on Xu et al. (2020). Geoderma. 402 (15 November), p. 115335. https://doi.org/10.1016/j.geoderma.2021.115335

Simulating cropping sequences using earth observation data

A - Papers appearing in refereed journals

Sharp, R. T., Henrys, P. A., Jarvis, S. G., Whitmore, A. P., Milne, A. E., Coleman, K., Mohankumar, S. E. P. and Metcalfe, H. 2021. Simulating cropping sequences using earth observation data. Computers and Electronics in Agriculture. 188, p. 106330. https://doi.org/10.1016/j.compag.2021.106330

Long term simulations of macronutrients (C, N and P) in UK freshwaters

A - Papers appearing in refereed journals

Bell, V. A., Naden, P. S., Tipping, E., Davies, H. N., Carnell, E., Davies, J. A. C., Dore, A. J., Dragosits, U., Lapworth, D. J., Muhammed, S. E., Quninton, J. N., Stuart, M., Tomilinson, S., Wang, L., Whitmore, A. P. and Wu, L. 2021. Long term simulations of macronutrients (C, N and P) in UK freshwaters. Science of the Total Environment. 776, p. 145813. https://doi.org/10.1016/j.scitotenv.2021.145813

The nutritional quality of cereals varies geospatially in Ethiopia and Malawi

A - Papers appearing in refereed journals

Gashu, D., Nalivata, P. C., Amede, T., Ander, E. L., Bailey, E. H., Botoman, L., Chagumaira, C., Gameda, S., Haefele, S. M., Hailu, K., Joy, E. J. M., Kalimbira, A. A., Kumssa, D. B., Lark, R. M., Ligowe, I. S., McGrath, S. P., Milne, A. E., Mossa, A. W., Munthali, M., Towett, E. K., Walsh, M. G., Wilson, L., Young, S. D. and Broadley, M. R. 2021. The nutritional quality of cereals varies geospatially in Ethiopia and Malawi. Nature. 594, pp. 71-76. https://doi.org/10.1038/s41586-021-03559-3

Determination of wheat spike and spikelet architecture and grain traits using X-ray Computed Tomography imaging

A - Papers appearing in refereed journals

Zhou, H., Riche, A. B., Hawkesford, M. J., Whalley, W. R., Atkinson, B. S., Sturrock, C. J. and Mooney, S. J. 2021. Determination of wheat spike and spikelet architecture and grain traits using X-ray Computed Tomography imaging. Plant Methods. 17 (article), p. 26. https://doi.org/10.1186/s13007-021-00726-5

The interaction between wheat roots and soil pores in structured field soil

A - Papers appearing in refereed journals

Zhou, H., Whalley, W. R., Hawkesford, M. J., Ashton, R. W., Atkinson, B., Atkinson, J. A., Sturrock, C. J., Bennett, M. J. and Mooney, S. J. 2021. The interaction between wheat roots and soil pores in structured field soil. Journal of Experimental Botany. 72 (2), pp. 747-756. https://doi.org/10.1093/jxb/eraa475

Characteristics of soil organic matter within an erosional landscape under agriculture in Northeast China: stock, source, and thermal stability

A - Papers appearing in refereed journals

Zhang, W., Gregory, A. S., Whalley, W. R., Ren, T. and Gao, W. 2021. Characteristics of soil organic matter within an erosional landscape under agriculture in Northeast China: stock, source, and thermal stability. Soil & Tillage Research. 209, p. 104927. https://doi.org/10.1016/j.still.2020.104927

Plant roots sense soil compaction through restricted ethylene diffusion

A - Papers appearing in refereed journals

Pandey, B. K., Huang, G., Bhosale, R., Hartman, S., Sturrock, C., Jose, L., Martin, O. C., Karady, M., Voesenek, L. A. C. J., Ljung, K., Lynch, J. P., Brown, K. M, Whalley, W. R., Mooney, S. J., Zhang, D. and Bennett, M. J. 2021. Plant roots sense soil compaction through restricted ethylene diffusion. Science - AAAS. 371 (6526), p. 276–280. https://doi.org/10.1126/science.abf3013

Advances in understanding of nitrogen (N) uptake by plant roots

B - Book chapters etc edited externally

Hawkesford, M. J. and Whalley, W. R. 2021. Advances in understanding of nitrogen (N) uptake by plant roots. in: Gregory, P. (ed.) Understanding and improving crop root function UK Burleigh Dodds.

Local impacts of climate change on winter wheat in Great Britain

A - Papers appearing in refereed journals

Putelat, T., Whitmore, A. P., Senapati, N. and Semenov, M. A. 2021. Local impacts of climate change on winter wheat in Great Britain. Royal Society Open Science. 8 (6), p. 201669. https://doi.org/10.1098/rsos.201669

The effect of organic carbon content on soil compression characteristics

A - Papers appearing in refereed journals

Suravi, K., Attenborough, K., Taherzadeh, S., Macdonald, A. J., Powlson, D. S., Ashton, R. W., Suravi, K. N. and Whalley, W. R. 2021. The effect of organic carbon content on soil compression characteristics. Soil & Tillage Research. 209 (May), p. 104975. https://doi.org/10.1016/j.still.2021.104975

Relationship between soil carbon sequestration and the ability of soil aggregates to transport dissolved oxygen

A - Papers appearing in refereed journals

Zhang, X., Gregory, A. S., Whalley, W. R., Coleman, K., Neal, A. L., Bacq-Labreuil, A., Mooney, S. J., Crawford, J. W., Soga, K. and Illangasekare, T. H. 2021. Relationship between soil carbon sequestration and the ability of soil aggregates to transport dissolved oxygen. Geoderma. 403, p. 115370. https://doi.org/10.1016/j.geoderma.2021.115370

The potential for soybean to diversify the production of plant-based protein in the UK

A - Papers appearing in refereed journals

Coleman, K., Whitmore, A. P., Hassall, K. L., Shield, I. F., Semenov, M. A., Dobermann, A., Bourhis, Y., Eskandary, A. and Milne, A. E. 2021. The potential for soybean to diversify the production of plant-based protein in the UK. Science of the Total Environment. 767, p. 144903. https://doi.org/10.1016/j.scitotenv.2020.144903

Wheat growth responses to soil mechanical impedance are dependent on phosphorus supply

A - Papers appearing in refereed journals

Wang, X., Shen, J., Hedden, P., Phillips, A. L., Thomas, S. G., Ge, Y., Ashton, R. W. and Whalley, W. R. 2021. Wheat growth responses to soil mechanical impedance are dependent on phosphorus supply. Soil & Tillage Research. 205, p. 104754. https://doi.org/10.1016/j.still.2020.104754

Time-lapse geophysical assessment of agricultural practices on soil moisture dynamics

A - Papers appearing in refereed journals

Blanchy, G., Watts, C. W., Richards, J., Bussell, J., Huntenburg, K., Sparkes, D. L., Stalham, M., Hawkesford, M. J., Whalley, W. R. and Binley, A. 2020. Time-lapse geophysical assessment of agricultural practices on soil moisture dynamics. Vadose Zone Journal. 19 (1), p. e20080. https://doi.org/10.1002/vzj2.20080

Accounting for heterogeneity in the 𝛉–𝛔 relationship: Application to wheat phenotyping using EMI

A - Papers appearing in refereed journals

Blanchy, G., Watts, C. W., Ashton, R. W., Webster, C. P., Hawkesford, M. J., Whalley, W. R. and Binley, A. 2020. Accounting for heterogeneity in the 𝛉–𝛔 relationship: Application to wheat phenotyping using EMI. Vadose Zone Journal. 19 (1), p. e20037. https://doi.org/10.1002/vzj2.20037

Sustainable Cropping Requires Adaptation to a Heterogeneous Rhizosphere

A - Papers appearing in refereed journals

Wang, X., Whalley, W. R., Miller, A. J., White, P. J., Zhang, F. and Shen, J. 2020. Sustainable Cropping Requires Adaptation to a Heterogeneous Rhizosphere. Trends in Plant Science. 25 (12), pp. 1194-1202. https://doi.org/10.1016/j.tplants.2020.07.006

Obtaining more benefits from crop residues as soil amendments by application as chemically heterogeneous mixtures

A - Papers appearing in refereed journals

Struijk, M., Whitmore, A. P., Mortimer, S. R. and Sizmur, T. 2020. Obtaining more benefits from crop residues as soil amendments by application as chemically heterogeneous mixtures. Soil. 6 (2), p. 467–481. https://doi.org/10.5194/soil-6-467-2020

Spatial prediction of the concentration of selenium (Se) in grain across part of Amhara Region, Ethiopia

A - Papers appearing in refereed journals

Milne, A. E., Gashu, D., Lark, R. M., Ameded, T., Bailey, E. H., Chagumaira, C., Dunham, S. J., Gameda, S., Kumssa, D. B., Mossa, A. W., Walsh, M. G., Wilson, L., Young, S. D., Ander, E. L., Joy, M. R. B. ., McGrath, S. P. and Broadley, M. 2020. Spatial prediction of the concentration of selenium (Se) in grain across part of Amhara Region, Ethiopia. Science of the Total Environment. 733, p. 139231. https://doi.org/10.1016/j.scitotenv.2020.139231

Time-intensive geoelectrical monitoring under winter wheat

A - Papers appearing in refereed journals

Blanchy, G., Virlet, N., Sadeghi-Tehran, P., Watts, C. W., Hawkesford, M. J., Whalley, W. R. and Binley, A. 2020. Time-intensive geoelectrical monitoring under winter wheat . Near Surface Geophysics. https://doi.org/10.1002/nsg.12107

Physical properties of a sandy soil as affected by incubation with a synthetic root exudate - strength, thermal and hydraulic conductivity, and evaporation

A - Papers appearing in refereed journals

Zhang, W., Gao, W., Whalley, W. R. and Ren, T. 2020. Physical properties of a sandy soil as affected by incubation with a synthetic root exudate - strength, thermal and hydraulic conductivity, and evaporation. European Journal of Soil Science. pp. 1-11. https://doi.org/10.1111/ejss.13007

A comparison between water uptake and root length density in winter wheat: effects of root density and rhizosphere properties

A - Papers appearing in refereed journals

Whalley, W. R., Zhang, X., Whalley, P. A., Ashton, R. W., Evans, J., Hawkesford, M. J., Griffiths, G., Huang, Z. D., Zhou, H. and Mooney, S. J. 2020. A comparison between water uptake and root length density in winter wheat: effects of root density and rhizosphere properties . Plant and Soil. 451, pp. 345-356. https://doi.org/10.1007/s11104-020-04530-3

Optimizing multifunctional agroecosystems in irrigated dryland agriculture to restore soil carbon – experiments and model

A - Papers appearing in refereed journals

Giongo, V., Coleman, K., Da Silva Santanac, M., Monteiro Salviano, A., Olszveskid, N., Whitmore, A. P. and Richter, G. M. 2020. Optimizing multifunctional agroecosystems in irrigated dryland agriculture to restore soil carbon – experiments and model. Science of the Total Environment. p. 138072. https://doi.org/10.1016/j.scitotenv.2020.138072

A novel approach to estimate soil penetrometer resistance from water content, bulk density, and shear wave velocity: A laboratory study on a loamy sand soil

A - Papers appearing in refereed journals

Zhang, W., Gao, W., Ren, T. and Whalley, W. R. 2020. A novel approach to estimate soil penetrometer resistance from water content, bulk density, and shear wave velocity: A laboratory study on a loamy sand soil. Geoderma. 368 (1 June), p. 114276. https://doi.org/10.1016/j.geoderma.2020.114276

Model-based optimisation of agricultural profitability and nutrient management: a practical approach for dealing with issues of scale

A - Papers appearing in refereed journals

Milne, A. E., Coleman, K., Todman, L. C. and Whitmore, A. P. 2020. Model-based optimisation of agricultural profitability and nutrient management: a practical approach for dealing with issues of scale. Environmental Monitoring And Assessment. 192, p. 730. https://doi.org/10.1007/s10661-020-08699-z

The Effect of Different Organic Fertilizers on Yield and Soil and Crop Nutrient Concentrations

A - Papers appearing in refereed journals

Thomas, C. L., Acquah, G., Whitmore, A. P., McGrath, S. P. and Haefele, S. M. 2019. The Effect of Different Organic Fertilizers on Yield and Soil and Crop Nutrient Concentrations. Agronomy. 9 (12), p. 776. https://doi.org/10.3390/agronomy9120776

Soil strength influences wheat root interactions with soil macropores

A - Papers appearing in refereed journals

Atkinson, J. A., Hawkesford, M. J., Whalley, W. R., Zhou, H. and Money, S. J. 2019. Soil strength influences wheat root interactions with soil macropores. Plant, Cell and Environment. pp. 1-11. https://doi.org/10.1111/pce.13659

Analysis of variance in soil research: Examining the assumptions

A - Papers appearing in refereed journals

Webster, R. and Lark, R. M. 2019. Analysis of variance in soil research: Examining the assumptions. European Journal of Soil Science. 70 (5), pp. 990-1000. https://doi.org/10.1111/ejss.12804

Multi-objective optimization as a tool to identify possibilities for future agricultural landscapes

A - Papers appearing in refereed journals

Todman, L. C., Coleman, K., Milne, A. E., Gil, J. D. B., Reidsma, P., Schwoob, M-H., Treyer, S. and Whitmore, A. P. 2019. Multi-objective optimization as a tool to identify possibilities for future agricultural landscapes. Science of the Total Environment. 687 (15 October), pp. 535-545. https://doi.org/10.1016/j.scitotenv.2019.06.070

Exploring future food provision scenarios for China

A - Papers appearing in refereed journals

Ma, L., Bai, Z., Ma, M., Guo, M., Jiang, R., Liu, J., Oenema, O., Velthof, G. L., Whitmore, A. P., Crawford, J. W., Dobermann, A., Schwoob, M. and Zhang, F. 2019. Exploring future food provision scenarios for China. Environmental Science & Technology. 53 (3), pp. 1385-1393. https://doi.org/10.1021/acs.est.8b04375

Multiple abiotic stress, nitrate availability and the growth of wheat

A - Papers appearing in refereed journals

Ge, Y., Hawkesford, M. J., Rosolem, C. A., Mooney, S. J., Ashton, R. W., Evans, J. and Whalley, W. R. 2019. Multiple abiotic stress, nitrate availability and the growth of wheat . Soil & Tillage Research. 191 (August), pp. 171-184. https://doi.org/10.1016/j.still.2019.04.005

The role of plant species and soil condition in the structural development of the rhizosphere

A - Papers appearing in refereed journals

Helliwell, J. R., Sturrock, C. J., Miller, A. J., Whalley, W. R. and Mooney, S. J. 2019. The role of plant species and soil condition in the structural development of the rhizosphere. Plant, Cell and Environment. 42 (6), pp. 1974-1986. https://doi.org/10.1111/pce.13529

Facilitating the elicitation of beliefs for use in Bayesian Belief modelling

A - Papers appearing in refereed journals

Hassall, K. L., Dailey, A. G., Zawadzka, J., Milne, A. E., Harris, J. A., Corstanje, R. and Whitmore, A. P. 2019. Facilitating the elicitation of beliefs for use in Bayesian Belief modelling. Environmental Modelling and Software. 122, p. 104539. https://doi.org/10.1016/j.envsoft.2019.104539

Accounting for data sparsity when forming spatially coherent zones

A - Papers appearing in refereed journals

Hassall, K. L., Whitmore, A. P. and Milne, A. E. 2019. Accounting for data sparsity when forming spatially coherent zones. Applied Mathematical Modelling. 72 (August), pp. 537-552. https://doi.org/10.1016/j.apm.2019.03.030

The relationships between seedling root screens, root growth in the field and grain yield for wheat

A - Papers appearing in refereed journals

Bai, C., Ge, Y., Ashton, R. W., Evans, J., Milne, A. E., Hawkesford, M. J., Whalley, W. R., Parry, M. A. J., Melichar, J., Feuerhelm, D., Bansept, P. and Bartsch, M. 2019. The relationships between seedling root screens, root growth in the field and grain yield for wheat . Plant and Soil. https://doi.org/10.1007/s11104-019-04088-9

Sustainable Development Goal 2: improved targets and indicators for agriculture and food security

A - Papers appearing in refereed journals

Juliana Dias Bernandes Gil, Pytrik Reidsma, Ken Giller, Lindsay Todman, Whitmore, A. P. and Martin van Ittersum 2019. Sustainable Development Goal 2: improved targets and indicators for agriculture and food security . AMBIO: A Journal of the Human Environment. 48 (7), pp. 685-698. https://doi.org/10.1007/s13280-018-1101-4

Shrinkage characteristics of lime concretion black soil as affected by biochar amendment

A - Papers appearing in refereed journals

Wei, C., Gao, W., Whalley, W. R. and Li, B. 2018. Shrinkage characteristics of lime concretion black soil as affected by biochar amendment. Pedosphere. 28 (5), pp. 713-725. https://doi.org/10.1016/S1002-0160(18)60041-4

Soil bulk density impacts on root water potential and ABA export in drying soil

A - Papers appearing in refereed journals

Donaldson, S., Dodd, I. C. and Whitmore, A. P. 2018. Soil bulk density impacts on root water potential and ABA export in drying soil. Acta Horticulturae. 1197 (1197), pp. 15-22. https://doi.org/10.17660/ActaHortic.2018.1197.3

Nitrogen fertiliser replacement values for organic amendments appear to increase with N application rates

A - Papers appearing in refereed journals

Hijbeek, R., Ten Berge, H. F. M., Whitmore, A. P., Barkusky, D., Schröder, J. J. and Van Ittersum, M. K. 2018. Nitrogen fertiliser replacement values for organic amendments appear to increase with N application rates. Nutrient Cycling in Agroecosystems. 110 (1), pp. 105-115. https://doi.org/10.1007/s10705-017-9875-5

Analysis of variance in soil research : let the analysis fit the action

A - Papers appearing in refereed journals

Webster, R. and Lark, R. M. 2018. Analysis of variance in soil research : let the analysis fit the action. European Journal of Soil Science. 69 (1), pp. 216-139. https://doi.org/10.1111/ejss.12511

Evidence for functional state transitions in intensively-managed soil ecosystems

A - Papers appearing in refereed journals

Todman, L. C., Fraser, F. C., Corstanje, R., Harris, J. A., Pawlett, M., Ritz, K. and Whitmore, A. P. 2018. Evidence for functional state transitions in intensively-managed soil ecosystems. Scientific Reports. 8 (11522). https://doi.org/10.1038/s41598-018-29925-2

Improved Interpretation of Mercury Intrusion and Soil Water Retention Percolation Characteristics by Inverse Modelling and Void Cluster Analysis

A - Papers appearing in refereed journals

Matthews, G. P., Levy, C. L., Laudone, G. M., Jones, K. L., Ridgway, C. J., Hallin, I. L., Gazze, S. A., Francis, L., Whalley, W. R., Schoelkopf, J. and Gane, P. A. C. 2018. Improved Interpretation of Mercury Intrusion and Soil Water Retention Percolation Characteristics by Inverse Modelling and Void Cluster Analysis. Transport In Porous Media. https://doi.org/10.1007/s11242-018-1087-1

The environmental costs and benefits of high-yield farming

A - Papers appearing in refereed journals

Balmford, A., Amano, T., Bartlett, H., Chadwick, D., Collins, A. L., Edwards, D., Field, R., Garnsworthy, P., Green, R., Smith, P., Waters, H., Whitmore, A. P., Broom, D. M., Chara, J., Finch, T., Garnett, E., Gathorne-Hardy, A., Hernandez-Medrano, J., Herrero, M., Hua, F., Latawiec, A., Misselbrook, T. H., Phalan, B., Simmons I. B., Takahashi, T., Vause, J., Ermgassen, E. Z. and Eisner, R. 2018. The environmental costs and benefits of high-yield farming. Nature Sustainability. 1, pp. 477-285. https://doi.org/10.1038/s41893-018-0138-5

The effect of microbial activity on soil water diffusivity

A - Papers appearing in refereed journals

Choudhury, B. U., Ferraris, S., Ashton, R. W., Powlson, D. S. and Whalley, W. R. 2018. The effect of microbial activity on soil water diffusivity. European Journal of Soil Science. 69 (3), pp. 407-413. https://doi.org/10.1111/ejss.12535

Impact of two centuries of intensive agriculture on soil carbon, nitrogen and phosphorus cycling in the UK

A - Papers appearing in refereed journals

Muhammed, S. E., Coleman, K., Wu, L., Bell, V. A., Davies, J. A. C., Carnell, E. J., Tomlinson, S. J., Dore, A. J., Dragosits, U., Naden, P. S., Glendining, M. J., Whitmore, A. P. and Tipping, E. 2018. Impact of two centuries of intensive agriculture on soil carbon, nitrogen and phosphorus cycling in the UK. Science of the Total Environment. 634 (1 September), pp. 1486-1504. https://doi.org/10.1016/j.scitotenv.2018.03.378

A novel dielectric tensiometer enabling precision PID-based irrigation control of polytunnel-grown strawberries in coir

A - Papers appearing in refereed journals

Goodchild, M. S., Jenkins, M. D., Whalley, W. R. and Watts, C. W. 2018. A novel dielectric tensiometer enabling precision PID-based irrigation control of polytunnel-grown strawberries in coir. Biosystems Engineering. 165 (January), pp. 70-76. https://doi.org/10.1016/j.biosystemseng.2017.10.018

The Nodulin 26-like intrinsic membrane protein OsNIP3;2 is involved in arsenite uptake by lateral roots in rice

A - Papers appearing in refereed journals

Chen, Y., Sun, S-K., Tang, Z., Liu, G., Moore, K. L., Maathuis, F. J. M., Miller, A. J., McGrath, S. P. and Zhao, F-J. 2017. The Nodulin 26-like intrinsic membrane protein OsNIP3;2 is involved in arsenite uptake by lateral roots in rice. Journal of Experimental Botany. 68 (11), pp. 3007-3016. https://doi.org/10.1093/jxb/erx165

Improvement of soil structure and crop yield by adding organic matter to soil (AHDB Project Report No.576)

D1 - Technical reports: non-confidential

Whitmore, A. P., Watts, C. W., Stroud, J. L., Sizmur, T., Ebrahim, S. M., Pawlett, M., Harris, J., Ritz, K., Wallace, P., White, E., Stobart, R., McKenzie, B. and Thallon, G. 2017. Improvement of soil structure and crop yield by adding organic matter to soil (AHDB Project Report No.576). Stoneleigh Agriculture and Horticulture Development Board.

Effect of soil saturation on denitrification in a grassland soil

A - Papers appearing in refereed journals

Cardenas, L. M., Bol, R., Lewicka-Szczebak, D., Gregory, A. S., Matthews, G. P., Whalley, W. R., Misselbrook, T. H., Scholefield, D. and Well, R. 2017. Effect of soil saturation on denitrification in a grassland soil. Biogeosciences. 14 (20), pp. 4691-4710. https://doi.org/10.5194/bg-14-4691-2017

Effect of microbial activity on penetrometer resistance and elastic modulus of soil at different temperatures

A - Papers appearing in refereed journals

Gao, W., Muñoz-Romero, V., Ren, T., Ashton, R. W., Morin, M., Clark, I. M., Powlson, D. S. and Whalley, W. R. 2017. Effect of microbial activity on penetrometer resistance and elastic modulus of soil at different temperatures. European Journal of Soil Science. 68 (4), pp. 412-419. https://doi.org/10.1111/ejss.12440

Shaping an Optimal Soil by Root–Soil Interaction

A - Papers appearing in refereed journals

Jin, K., White, P. J., Whalley, W. R., Shen, J. and Shi, L. 2017. Shaping an Optimal Soil by Root–Soil Interaction. Trends in Plant Science. 22 (10), pp. 823-829. https://doi.org/10.1016/j.tplants.2017.07.008

The landscape model: A model for exploring trade-offs between agricultural production and the environment

A - Papers appearing in refereed journals

Coleman, K., Muhammed, S. E., Milne, A. E., Todman, L. C., Dailey, A. G., Glendining, M. J. and Whitmore, A. P. 2017. The landscape model: A model for exploring trade-offs between agricultural production and the environment. Science of the Total Environment. 609 (Supplement C), pp. 1483-1499. https://doi.org/10.1016/j.scitotenv.2017.07.193

Assessing sampling designs for determining fertilizer practice from yield data

A - Papers appearing in refereed journals

Muhammed, S. E., Marchant, B. P., Webster, R., Whitmore, A. P., Dailey, A. G. and Milne, A. E. 2017. Assessing sampling designs for determining fertilizer practice from yield data. Computers and Electronics in Agriculture. 135 (1 April), pp. 163-174. https://doi.org/10.1016/j.compag.2017.02.002

Milled cereal straw accelerates earthworm (Lumbricus terrestris) growth more than selected organic amendments

A - Papers appearing in refereed journals

Sizmur, T., Martin, E., Wagner, K., Parmentier, E., Watts, C. W. and Whitmore, A. P. 2017. Milled cereal straw accelerates earthworm (Lumbricus terrestris) growth more than selected organic amendments. Applied Soil Ecology. 113 (May), pp. 166-177. https://doi.org/10.1016/j.apsoil.2016.12.006

Methods to estimate changes in soil water for phenotyping root activity in the field

A - Papers appearing in refereed journals

Whalley, W. R., Binley, A., Watts, C. W., Shanahan, P., Dodd, I. C., Ober, E. S., Ashton, R. W., Webster, C. P., White, R. P. and Hawkesford, M. J. 2017. Methods to estimate changes in soil water for phenotyping root activity in the field. Plant and Soil. 415 (1-2), pp. 407-422. https://doi.org/10.1007/s11104-016-3161-1

Cover cropping with oilseed radish (Raphanus sativus) alone does not enhance deep burrowing earthworm (Lumbricus terrestris) midden counts

A - Papers appearing in refereed journals

Stroud, J. L., Irons, D. E., Watts, C. W., Storkey, J., Morris, N. L., Stobart, R. M., Fielding, H. A. and Whitmore, A. P. 2017. Cover cropping with oilseed radish (Raphanus sativus) alone does not enhance deep burrowing earthworm (Lumbricus terrestris) midden counts. Soil & Tillage Research. 165 (January), pp. 11-15. https://doi.org/10.1016/j.still.2016.07.013

The emergent rhizosphere: imaging the development of the porous architecture at the root-soil interface

A - Papers appearing in refereed journals

Helliwell, J. R., Sturrock, C. J., Mairhofer, S., Craigon, J., Ashton, R. W., Miller, A. J., Whalley, W. R. and Mooney, S. J. 2017. The emergent rhizosphere: imaging the development of the porous architecture at the root-soil interface. Scientific Reports. 7, p. 14875. https://doi.org/10.1038/s41598-017-14904-w

Enhanced Plant Rooting and Crop System Management for Improved N Use Efficiency

B - Book chapters etc edited externally

Rosolem, C. A., Ritz, K., Cantarella, H., Hawkesford, M. J., Whalley, W. R. and Mooney, S. J. 2017. Enhanced Plant Rooting and Crop System Management for Improved N Use Efficiency. in: Sparks, D. L. (ed.) Advances in Agronomy Vol.146 Academic Press Inc Elsevier Science.

Root growth in field-grown winter wheat: Some effects of soil conditions, season and genotype.

A - Papers appearing in refereed journals

Hodgkinson, L., Dodd, I. C., Binley, A., Ashton, R. W., White, R. P., Watts, C. W. and Whalley, W. R. 2017. Root growth in field-grown winter wheat: Some effects of soil conditions, season and genotype. European Journal of Agronomy. 91 (November), pp. 74-83. https://doi.org/10.1016/j.eja.2017.09.014

A Novel Method to Quantify Soil Aggregate Stability by Measuring Aggregate Bond Energies

A - Papers appearing in refereed journals

Efrat, R., Rawlins, B. G., Quinton, J. N., Watts, C. W. and Whitmore, A. P. 2016. A Novel Method to Quantify Soil Aggregate Stability by Measuring Aggregate Bond Energies. Geophysical Research Abstracts. 18, pp. EGU2016-513-3.

Distinct spatial dependency of carbon distribution between soil pools in grassland soil

A - Papers appearing in refereed journals

Cordova, C., Lark, R. M., Sohi, S. P. and Goulding, K. W. T. 2016. Distinct spatial dependency of carbon distribution between soil pools in grassland soil. Chilean Journal of Agricultural & Animal Sciences. 32 (Special issue 1), pp. 23-36. https://doi.org/N/A

OsCHX14 is Involved in the K+ Homeostasis in Rice (Oryza sativa) Flowers

A - Papers appearing in refereed journals

Chen, Y., Ma, J. K., Miller, A. J., Luo, B. B., Wang, M., Zhu, Z. and Ouwerkerk, P. B. F. 2016. OsCHX14 is Involved in the K+ Homeostasis in Rice (Oryza sativa) Flowers. Plant and cell physiology. 57 (7), pp. 1530-1543. https://doi.org/10.1093/pcp/pcw088

Increased soil phosphorus availability induced by faba bean root exudation stimulates root growth and phosphorus uptake in neighbouring maize

A - Papers appearing in refereed journals

Zhang, D. S., Zhang, C. C., Tang, X. Y., Li, H. G., Zhang, F-S., Rengel, Z., Whalley, W. R., Davies, W. J. and Shen, J. B. 2016. Increased soil phosphorus availability induced by faba bean root exudation stimulates root growth and phosphorus uptake in neighbouring maize. New Phytologist. 209 (2), pp. 823-831. https://doi.org/10.1111/nph.13613

Lumbricus terrestris middens are biological and chemical hotspots in a minimum tillage arable ecosystem

A - Papers appearing in refereed journals

Stroud, J. L., Irons, D. E., Carter, J. E., Watts, C. W., Murray, P. J., Norris, S. L. and Whitmore, A. P. 2016. Lumbricus terrestris middens are biological and chemical hotspots in a minimum tillage arable ecosystem. Applied Soil Ecology. 105, pp. 31-35. https://doi.org/10.1016/j.apsoil.2016.03.019

Lumbricus terrestris abundance is not enhanced after three years of compost amendments on a reduced tillage wheat cultivation conversion

A - Papers appearing in refereed journals

Stroud, J. L., Irons, D., Watts, C. W. and Whitmore, A. P. 2016. Lumbricus terrestris abundance is not enhanced after three years of compost amendments on a reduced tillage wheat cultivation conversion. Applied Soil Ecology. 98, pp. 282-284. https://doi.org/10.1016/j.apsoil.2015.10.007

On the theory of Brutsaert about elastic wave speeds in unsaturated soils

A - Papers appearing in refereed journals

Shin, H., Whalley, W. R., Attenborough, K. and Taherzadeh, S. 2016. On the theory of Brutsaert about elastic wave speeds in unsaturated soils. Soil & Tillage Research. 156, pp. 155-165. https://doi.org/10.1016/j.still.2015.10.006

Distinct respiratory responses of soils to complex organic substrate are governed predominantly by soil architecture and its microbial community

A - Papers appearing in refereed journals

Fraser, F. C., Todman, L. C., Corstanje, R., Deeks, L. K., Harris, J. A., Pawlett, M., Whitmore, A. P. and Ritz, K. 2016. Distinct respiratory responses of soils to complex organic substrate are governed predominantly by soil architecture and its microbial community. Soil Biology and Biochemistry. 103, pp. 493-501. https://doi.org/10.1016/j.soilbio.2016.09.015

On the origin of carbon dioxide released from rewetted soils

A - Papers appearing in refereed journals

Fraser, F. C., Corstanje, R., Deeks, L. K., Harris, J. A., Pawlett, M., Todman, L. C., Whitmore, A. P. and Ritz, K. 2016. On the origin of carbon dioxide released from rewetted soils. Soil Biology and Biochemistry. 101, pp. 1-5. https://doi.org/10.1016/j.soilbio.2016.06.032

A simple model to predict soil penetrometer resistance as a function of density, drying and depth in the field

A - Papers appearing in refereed journals

Gao, W. D., Whalley, W. R., Tian, Z. C., Liu, J. and Ren, T. S. 2016. A simple model to predict soil penetrometer resistance as a function of density, drying and depth in the field. Soil & Tillage Research. 155, pp. 190-198. https://doi.org/10.1016/j.still.2015.08.004

150 years of macronutrient change in unfertilized UK ecosystems: Observations vs simulations

A - Papers appearing in refereed journals

Davies, J. A. C., Tipping, E. and Whitmore, A. P. 2016. 150 years of macronutrient change in unfertilized UK ecosystems: Observations vs simulations. Science of the Total Environment. 572 (1), pp. 1485-1495. https://doi.org/10.1016/j.scitotenv.2016.03.055

Major crop species show differential balance between root morphological and physiological responses to variable phosphorus supply

A - Papers appearing in refereed journals

Lyu, Y., Tang, H. L., Li, H. G., Zhang, F-S., Rengel, Z., Whalley, W. R., Shen, J. B. and Stralia, V. P. 2016. Major crop species show differential balance between root morphological and physiological responses to variable phosphorus supply. Frontiers in Plant Science. 7. https://doi.org/10.3389/fpls.2016.01939

Population collapse of Lumbricus terrestris in conventional arable cultivations and response to straw applications

A - Papers appearing in refereed journals

Stroud, J. L., Irons, D. E., Watts, C. W., White, R. P., McGrath, S. P. and Whitmore, A. P. 2016. Population collapse of Lumbricus terrestris in conventional arable cultivations and response to straw applications. Applied Soil Ecology. 108 (December), pp. 72-75. https://doi.org/10.1016/j.apsoil.2016.08.002

Effect of compaction on nitrous oxide and nitrogen emissions from UK soils

C1 - Edited contributions to conferences/learned societies

Cardenas, L. M., Matthews, G. P., Gregory, A. S., Whalley, W. R., Bird, N. R. A., Misselbrook, T. H., Laudone, G. M., Dhanoa, M. S. and Scholefield, D. 2016. Effect of compaction on nitrous oxide and nitrogen emissions from UK soils. Abstract for GGAA conferernce, Melbourne, 14-18 February, 2016.

The unique contribution of Rothamsted to ecological research at large temporal scales

B - Book chapters etc edited externally

Storkey, J., Macdonald, A. J., Bell, J. R., Clark, I. M., Gregory, A. S., Hawkins, N. J., Hirsch, P. R., Todman, L. C. and Whitmore, A. P. 2016. The unique contribution of Rothamsted to ecological research at large temporal scales. in: Dumbrell, A. J., Kordas, R. L. and Woodward, G. (ed.) Advances in Ecological Research 55: Large-Scale Ecology: Model Systems to Global Perspectives Academic Press, Oxford. pp. 3-42

Boundary line analysis of the effect of water-filled pore space on nitrous oxide emission from cores of arable soil

A - Papers appearing in refereed journals

Lark, R. M. and Milne, A. E. 2016. Boundary line analysis of the effect of water-filled pore space on nitrous oxide emission from cores of arable soil. European Journal of Soil Science. 67 (2), pp. 148-159. https://doi.org/10.1111/ejss.12318

Defining and quantifying the resilience of responses to disturbance: a conceptual and modelling approach from soil science

A - Papers appearing in refereed journals

Todman, L. C., Fraser, F. C., Corstanje, R., Deeks, L. K., Harris, J. A., Pawlett, M., Ritz, K. and Whitmore, A. P. 2016. Defining and quantifying the resilience of responses to disturbance: a conceptual and modelling approach from soil science. Scientific Reports. 6, p. 28426. https://doi.org/10.1038/srep28426

The North Wyke Farm Platform: effect of temperate grassland farming systems on soil moisture contents, runoff and associated water quality dynamics

A - Papers appearing in refereed journals

Orr, R. J., Murray, P. J., Eyles, C. J., Blackwell, M. S. A., Cardenas, L. M., Collins, A. L., Dungait, J. A. J., Goulding, K. W. T., Griffith, B. A., Gurr, S. J., Harris, P., Hawkins, J. M. B., Misselbrook, T. H., Rawlings, C. J., Shepherd, A., Sint, H. M., Takahashi, T., Tozer, K. N., Whitmore, A. P., Wu, L. and Lee, M. R. F. 2016. The North Wyke Farm Platform: effect of temperate grassland farming systems on soil moisture contents, runoff and associated water quality dynamics. European Journal of Soil Science. 67 (4), pp. 374-385. https://doi.org/10.1111/ejss.12350

Long-term management changes in topsoil and subsoil organic carbon and nitrogen dynamics in a temperate agricultural system

A - Papers appearing in refereed journals

Gregory, A. S., Dungait, J. A. J., Watts, C. W., Bol, R., Dixon, E. R., White, R. P. and Whitmore, A. P. 2016. Long-term management changes in topsoil and subsoil organic carbon and nitrogen dynamics in a temperate agricultural system. European Journal of Soil Science. 67 (4), pp. 421-430. https://doi.org/10.1111/ejss.12359

Deep roots and soil structure

A - Papers appearing in refereed journals

Gao, W., Hodgkinson, L., Jin, K., Watts, C. W., Ashton, R. W., Shen, J., Ren, T., Dodd, I. C., Binley, A., Phillips, A. L., Hedden, P., Hawkesford, M. J. and Whalley, W. R. 2016. Deep roots and soil structure. Plant, Cell and Environment. 39 (8), pp. 1662-1668. https://doi.org/10.1111/pce.12684

Designing a sampling scheme to reveal correlations between weeds and soil properties at multiple spatial scales

A - Papers appearing in refereed journals

Metcalfe, H., Milne, A. E., Webster, R., Lark, R. M., Murdoch, A. J. and Storkey, J. 2016. Designing a sampling scheme to reveal correlations between weeds and soil properties at multiple spatial scales. Weed Research. 56 (1), pp. 1-13. https://doi.org/10.1111/wre.12184

Uniting genetics and chemistry to reduce the risk of take-all disease in 2nd wheat crops

C1 - Edited contributions to conferences/learned societies

Moughan, J., Mcmillan, V. E., Melichar, J., Ranner, D., Thornton, C., Whalley, W. R. and Hammond-Kosack, K. E. 2015. Uniting genetics and chemistry to reduce the risk of take-all disease in 2nd wheat crops. Abstracts 9th Symposium International Society for Root Research (ISRR) "Roots Down Under", Canberra, Australia, 6-9 Octomber, 2015. pp. P90

Exploring the susceptibility of cereal species to Phialophora fungi

C1 - Edited contributions to conferences/learned societies

Osborne, S., Mcmillan, V. E., Whalley, W. R., Foulkes, J. and Hammond-Kosack, K. E. 2015. Exploring the susceptibility of cereal species to Phialophora fungi. Abstracts Molecular Biology of Plant Pathogens Conference (MBPP), University of West England, Bristol, 8-9 April, 2015. pp. 56

The effect of farmers' decisions on pest control with Bt crops: a billion dollar game of strategy

A - Papers appearing in refereed journals

Milne, A. E., Bell, J. R., Hutchison, W. D., Van Den Bosch, F., Mitchell, P. D., Crowder, D., Parnell, S. and Whitmore, A. P. 2015. The effect of farmers' decisions on pest control with Bt crops: a billion dollar game of strategy. PLOS Computational Biology. 11, p. e1004483. https://doi.org/10.1371/journal.pcbi.1004483

Nitrous oxide emissions from fertilised UK arable soils: fluxes, emission factors and mitigation

A - Papers appearing in refereed journals

Bell, M. J., Hinton, N., Cloy, J. M., Topp, C. F. E., Rees, R. M., Cardenas, L. M., Scott, T., Webster, C. P., Ashton, R. W., Whitmore, A. P., Williams, J. R., Balshaw, H., Paine, F., Goulding, K. W. T. and Chadwick, D. R. 2015. Nitrous oxide emissions from fertilised UK arable soils: fluxes, emission factors and mitigation. Agriculture, Ecosystems & Environment. 212, pp. 134-147. https://doi.org/10.1016/j.agee.2015.07.003

Modelling the impact of environmental changes on grassland systems with SPACSYS

C1 - Edited contributions to conferences/learned societies

Wu, L., Whitmore, A. P. and Bellocchi, G. 2015. Modelling the impact of environmental changes on grassland systems with SPACSYS. Proceedings of the MACSUR International Livestock Modelling and Research Colloquium . Cambridge University Press (CUP) Cambridge. https://doi.org/10.1017/S2040470014000508

Technologies for increasing carbon storage in soil to mitigate climate change

A - Papers appearing in refereed journals

Whitmore, A. P., Kirk, G. J. D. and Rawlins, B. G. 2015. Technologies for increasing carbon storage in soil to mitigate climate change. Soil Use and Management. 31 (Suppl. 1), pp. 62-71. https://doi.org/10.1111/sum.12115

Probing the basis of soil resilience

A - Papers appearing in refereed journals

Corstanje, R., Deeks, L. R., Whitmore, A. P., Gregory, A. S. and Ritz, K. 2015. Probing the basis of soil resilience. Soil Use and Management. 31 (Suppl. 1), pp. 72-81. https://doi.org/10.1111/sum.12107

A review of the impacts of degradation threats on soil properties in the UK

A - Papers appearing in refereed journals

Gregory, A. S., Ritz, K., McGrath, S. P., Quinton, J. N., Goulding, K. W. T., Jones, R. J. A., Harris, J. A., Bol, R., Wallace, P., Pilgrim, E. S. and Whitmore, A. P. 2015. A review of the impacts of degradation threats on soil properties in the UK. Soil Use and Management. 31 (S1), pp. 1-15. https://doi.org/10.1111/sum.12212

The use of electromagnetic induction to monitor changes in soil moisture profiles beneath different wheat genotypes

A - Papers appearing in refereed journals

Shanahan, P. W., Binley, A., Whalley, W. R. and Watts, C. W. 2015. The use of electromagnetic induction to monitor changes in soil moisture profiles beneath different wheat genotypes. Soil Science Society of America Journal. 79, pp. 459-466. https://doi.org/10.2136/sssaj2014.09.0360

Communicating the uncertainty in estimated greenhouse gas emissions from agriculture

A - Papers appearing in refereed journals

Milne, A. E., Glendining, M. J., Lark, R. M., Perryman, S. A. M., Gordon, T. and Whitmore, A. P. 2015. Communicating the uncertainty in estimated greenhouse gas emissions from agriculture. Journal of Environmental Management. 160, pp. 139-153. https://doi.org/10.1016/j.jenvman.2015.05.034

The effect of impedance to root growth on plant architecture in wheat

A - Papers appearing in refereed journals

Jin, K., Shen, J., Ashton, R. W., White, Robin P., Dodd, I. C., Phillips, A. L., Parry, M. A. J. and Whalley, W. R. 2015. The effect of impedance to root growth on plant architecture in wheat. Plant and Soil. 392, pp. 323-332. https://doi.org/10.1007/s11104-015-2462-0

The role of nodes in arsenic storage and distribution in rice

A - Papers appearing in refereed journals

Chen, Y., Moore, K. L., Miller, A. J., McGrath, S. P., Ma, J. F. and Zhao, F-J. 2015. The role of nodes in arsenic storage and distribution in rice. Journal of Experimental Botany. 66, pp. 3717-3724. https://doi.org/10.1093/jxb/erv164

Simulation of nitrous oxide emissions at field scale using the SPACSYS model

A - Papers appearing in refereed journals

Wu, L., Rees, R. M., Tarsitano, D., Zhang, X., Jones, S. K. and Whitmore, A. P. 2015. Simulation of nitrous oxide emissions at field scale using the SPACSYS model. Science of the Total Environment. 530-531, pp. 76-86. https://doi.org/10.1016/j.scitotenv.2015.05.064

Isotope fractionation factors controlling isotopocule signatures of soil-emitted N2O produced by denitrification processes of various rates

A - Papers appearing in refereed journals

Lewicka-Szczebak, D., Well, R., Bol, R., Gregory, A. S., Matthews, G. P., Misselbrook, T. H., Whalley, W. R. and Cardenas, L. M. 2015. Isotope fractionation factors controlling isotopocule signatures of soil-emitted N2O produced by denitrification processes of various rates. Rapid Communications in Mass Spectrometry. 29 (3), pp. 269-282. https://doi.org/10.1002/rcm.7102

Wheat root growth responses to horizontal stratification of fertiliser in a water-limited environment

A - Papers appearing in refereed journals

Jin, K., Shen, J., Ashton, R. W., White, Robin P., Dodd, I. C., Parry, M. A. J. and Whalley, W. R. 2015. Wheat root growth responses to horizontal stratification of fertiliser in a water-limited environment. Plant and Soil. 386, pp. 77-88. https://doi.org/10.1007/s11104-014-2249-8

Exploiting yield maps and soil management zones

A - Papers appearing in refereed journals

Muhammed, S. E., Milne, A. E., Marchant, B. P., Griffin, S. and Whitmore, A. P. 2014. Exploiting yield maps and soil management zones. Proceedings of the International Fertiliser Society. 22, p. poster.

The North Wyke Farm Platform, a national capability for research into sustainability of temperate agricultural grassland management: data and modelling opportunities

C2 - Non-edited contributions to conferences

Harris, P., Griffith, B. A., Shepherd, A., Peukert, S., Hawkins, J. M. B., Elyes, C., Whitmore, A. P., Blackwell, M. S. A., Brazier, R. E., Cardenas, L. M., Wu, L., Dungait, J. A. J., Collins, A. L., Gurr, S. J., Murray, P. J., Goulding, K. W. T. and Orr, R. J. 2014. The North Wyke Farm Platform, a national capability for research into sustainability of temperate agricultural grassland management: data and modelling opportunities. Abstracts Tereno International Conference: from Observation to Prediction in Terrestrial Systems, Bonn, 29 September-2 October 2014 . pp. P2-07

Understanding the scale-dependence of the relations between soil conditions and weed density and the implications for precision management of weeds

A - Papers appearing in refereed journals

Metcalfe, H., Milne, A. E., Murdoch, A., Webster, R., Lark, R. M. and Storkey, J. 2014. Understanding the scale-dependence of the relations between soil conditions and weed density and the implications for precision management of weeds. Aspects of Applied Biology. 127, pp. 165-171.

Exploiting yield maps and soil management zones

G - Articles in popular magazines and other technical publications

Milne, A. E., Marchant, B. P., Whitmore, A. P. and Muhammed, S. E. 2014. Exploiting yield maps and soil management zones. Landmark. 19, pp. 3-4.

Does organic management lead to enhanced soil physical quality?

A - Papers appearing in refereed journals

Papadopoulos, A., Bird, N. R. A., Whitmore, A. P. and Mooney, S. J. 2014. Does organic management lead to enhanced soil physical quality? Geoderma. 213, pp. 435-443. https://doi.org/10.1016/j.geoderma.2013.08.033

Nitrous oxide emissions from fertilised UK arable soils: quantification and mitigation

C2 - Non-edited contributions to conferences

Bell, M., Winning, M., Cloy, J., Rees, B., Cardenas, L. M., Donovan, N., Scott, T., Webster, C. P., Whitmore, A. P., Williams, J., Balshaw, H., Paine, F. and Chadwick, D. R. 2014. Nitrous oxide emissions from fertilised UK arable soils: quantification and mitigation. Cordovil, C. M. d. S. (ed.) Abstracts 18th Nitrogen Workshop, Lisbon, 30 June- 3 July 2014 . pp. 375-376

Triaxial testing to determine the effect of soil type and organic carbon content on soil consolidation and shear deformation characteristics

A - Papers appearing in refereed journals

Chakraborty, D., Watts, C. W., Powlson, D. S., Macdonald, A. J., Ashton, R. W., White, Robin P. and Whalley, W. R. 2014. Triaxial testing to determine the effect of soil type and organic carbon content on soil consolidation and shear deformation characteristics. Soil Science Society of America Journal. 78, pp. 1192-1200. https://doi.org/10.2136/sssaj2014.01.0007

Analysis of uncertainties in the estimates of nitrous oxide and methane emissions in the UK's greenhouse gas inventory for agriculture

A - Papers appearing in refereed journals

Milne, A. E., Glendining, M. J., Bellamy, P., Misselbrook, T. H., Gilhespy, S. L., Rivas Casado, M., Hulin, A., Van Oijen, M. and Whitmore, A. P. 2014. Analysis of uncertainties in the estimates of nitrous oxide and methane emissions in the UK's greenhouse gas inventory for agriculture. Atmospheric Environment. 82, pp. 94-105. https://doi.org/10.1016/j.atmosenv.2013.10.012

Quantifying the impact of microbes on soil structural development and behaviour in wet soils

A - Papers appearing in refereed journals

Helliwell, J. R., Miller, A. J., Whalley, W. R., Mooney, S. J. and Sturrock, C. J. 2014. Quantifying the impact of microbes on soil structural development and behaviour in wet soils. Soil Biology and Biochemistry. 74, pp. 138-147. https://doi.org/10.1016/j.soilbio.2014.03.009

An assessment of subsoil organic carbon stocks in England and Wales

A - Papers appearing in refereed journals

Gregory, A. S., Kirk, G. J. D., Keay, C. A., Rawlins, B. G., Wallace, P. and Whitmore, A. P. 2014. An assessment of subsoil organic carbon stocks in England and Wales. Soil Use and Management. 30 (1), pp. 10-22. https://doi.org/10.1111/sum.12085

Optimized multi-phase sampling for soil remediation surveys

A - Papers appearing in refereed journals

Marchant, B. P., McBratney, A. B., Lark, R. M. and Minasny, B. 2013. Optimized multi-phase sampling for soil remediation surveys. Spatial Statistics. 4, pp. 1-13. https://doi.org/10.1016/j.spasta.2012.11.001

Effect of nitrogen supply form on the invasion of rice roots by the root-knot nematode, Meloidogyne graminicola

A - Papers appearing in refereed journals

Patil, J., Miller, A. J. and Gaur, H. 2013. Effect of nitrogen supply form on the invasion of rice roots by the root-knot nematode, Meloidogyne graminicola. Nematology. 15 (4), pp. 483-492. https://doi.org/10.1163/15685411-00002694

Using SPACSYS to analyse the interaction between plant and environment in a systems approach

C2 - Non-edited contributions to conferences

Wu, L. and Whitmore, A. P. 2013. Using SPACSYS to analyse the interaction between plant and environment in a systems approach. Abstracts Workshop on Exploring New Ideas for Trade and Agriculture Model Integration for Assessing the Impacts of Climate Change on Food Security, Haifa, 3-5 March 2013 .

Modelling the path to better soil applied pesticides

C2 - Non-edited contributions to conferences

Sweeney, P., Travis, K., Whalley, W. R., Whitmore, A. P., Dailey, A. G., Wu, L., Van Beinum, W. and Brown, C. 2013. Modelling the path to better soil applied pesticides. Abstracts Conference on Pesticide Behaviour in Soils, Water and Air, York, 2-4 September 2013 .

Effect of root nitrogen supply forms on attraction and repulsion of second-stage juveniles of Meloidogyne graminicola

A - Papers appearing in refereed journals

Patil, J., Powers, S. J., Davies, K. G., Gaur, H. S. and Miller, A. J. 2013. Effect of root nitrogen supply forms on attraction and repulsion of second-stage juveniles of Meloidogyne graminicola. Nematology. 15, pp. 469-482. https://doi.org/10.1163/15685411-00002697

Spatial analysis of gilgai patterns

G - Articles in popular magazines and other technical publications

Webster, R., Milne, A. E. and Lark, R. M. 2013. Spatial analysis of gilgai patterns. Pedometron. 33, pp. 4-9.

How do roots elongate in a structured soil?

A - Papers appearing in refereed journals

Jin, K., Shen, J., Ashton, R. W., Dodd, I. C., Parry, M. A. J. and Whalley, W. R. 2013. How do roots elongate in a structured soil? Journal of Experimental Botany. 64, pp. 4761-4777. https://doi.org/10.1093/jxb/ert286

The involvement of gibberellin signalling in the effect of soil resistance to root penetration on leaf elongation and tiller number in wheat

A - Papers appearing in refereed journals

Coelho Filho, M. A., Colebrook, E. H., Lloyd, D. P. A., Webster, C. P., Mooney, S. J., Phillips, A. L., Hedden, P. and Whalley, W. R. 2013. The involvement of gibberellin signalling in the effect of soil resistance to root penetration on leaf elongation and tiller number in wheat. Plant and Soil. 371, pp. 81-94. https://doi.org/10.1007/s11104-013-1662-8

Measurement of the matric potential of soil water in the rhizosphere

A - Papers appearing in refereed journals

Whalley, W. R., Ober, E. S. and Jenkins, M. 2013. Measurement of the matric potential of soil water in the rhizosphere. Journal of Experimental Botany. 64, pp. 3951-3963. https://doi.org/10.1093/jxb/ert044

Wavelet analysis of the variability of nitrous oxide emissions from soil at decameter to kilometer scales

A - Papers appearing in refereed journals

Milne, A. E., Haskard, K. A., Webster, C. P., Truan, I. A., Goulding, K. W. T. and Lark, R. M. 2013. Wavelet analysis of the variability of nitrous oxide emissions from soil at decameter to kilometer scales. Journal of Environmental Quality. 42, pp. 1070-1079. https://doi.org/10.2134/jeq2012.0007

What do we need to know to enhance the environmental sustainability of agricultural production? A prioritisation of knowledge needs for the UK food system

A - Papers appearing in refereed journals

Dicks, L. V., Bardgett, R. D., Bell, J., Benton, T. G., Booth, A., Bouwman, J., Brown, C., Bruce, A., Burgess, P. J., Butler, S. J., Crute, I. R., Dixon, F., Drummond, C., Freckleton, R. P., Gill, M., Graham, A., Hails, R. S., Hallett, J., Hart, B., Hillier, J., Holland, J. M., Huxley, J., Ingram, J. S. I., King, V., MacMillan, T., Mcgonigle, D. F., McQuaid, C. F., Nevard, T., Norman, S., Norris, K., Pazderka, C., Poonaji, I., Quinn, C. H., Ramsden, S. J., Sinclair, D., Siriwardena, G. M., Vickery, J. A., Whitmore, A. P., Wolmer, W. and Sutherland, W. J. 2013. What do we need to know to enhance the environmental sustainability of agricultural production? A prioritisation of knowledge needs for the UK food system. Sustainability. 5 (7), pp. 3095-3115. https://doi.org/10.3390/su5073095

Soil mechanical resistance and root growth and function

B - Book chapters etc edited externally

Whalley, W. R. and Bengough, A. G. 2013. Soil mechanical resistance and root growth and function. in: Beeckman, T. and Eshel, A. (ed.) Plant roots: the hidden half, 4th ed CRC Press, Boca Raton, Florida. pp. 37.1-37.15

Estimating penetrometer resistance and matric potential from the velocities of shear and compression waves

A - Papers appearing in refereed journals

Gao, W., Watts, C. W., Ren, T., Shin, H-C., Taherzadeh, S., Attenborough, K., Jenkins, M. and Whalley, W. R. 2013. Estimating penetrometer resistance and matric potential from the velocities of shear and compression waves. Soil Science Society of America Journal. 77, pp. 721-728. https://doi.org/10.2136/sssaj2012.0394

Do root exudates exert more influence on rhizosphere bacterial community structure than other rhizodeposits?

B - Book chapters etc edited externally

Hirsch, P. R., Miller, A. J. and Dennis, P. G. 2013. Do root exudates exert more influence on rhizosphere bacterial community structure than other rhizodeposits? in: Debruijn, F. J. (ed.) Molecular microbial ecology of the rhizosphere, Volume 1 John Wiley & Sons Hoboken, N.J.. pp. 229-242

Non-invasive characterization of pore-related and elastic properties of soils in linear Biot-Stoll theory using acoustic-to-seismic coupling

A - Papers appearing in refereed journals

Shin, H-C., Taherzadeh, S., Attenborough, K., Whalley, W. R. and Watts, C. W. 2013. Non-invasive characterization of pore-related and elastic properties of soils in linear Biot-Stoll theory using acoustic-to-seismic coupling. European Journal of Soil Science. 64 (3), pp. 308-323. https://doi.org/10.1111/ejss.12000

Using geostatistics to analyze prediction errors from a simulation model of sediment particle sizes across Tokyo Bay

A - Papers appearing in refereed journals

Orton, T. G., Lark, R. M. and Sasaki, J. 2013. Using geostatistics to analyze prediction errors from a simulation model of sediment particle sizes across Tokyo Bay. Journal Of Coastal Research. 29, pp. 145-156. https://doi.org/10.2112/JCOASTRES-D-12-00003.1

A novel grass hybrid to reduce flood generation in temperate regions

A - Papers appearing in refereed journals

Macleod, C. J. A., Humphreys, M. W., Whalley, W. R., Turner, L., Binley, A., Watts, C. W., Skot, L., Joynes, A., Hawkins, S., King, I. P., O'donovan, S. and Haygarth, P. M. 2013. A novel grass hybrid to reduce flood generation in temperate regions. Scientific Reports. 3, p. 1683. https://doi.org/10.1038/srep01683

A dual-porous, inverse model of water retention to study biological and hydrological interactions in soil

A - Papers appearing in refereed journals

Laudone, G. M., Matthews, G. P., Gregory, A. S., Bird, N. R. A. and Whalley, W. R. 2013. A dual-porous, inverse model of water retention to study biological and hydrological interactions in soil. European Journal of Soil Science. 64 (3), pp. 345-356. https://doi.org/10.1111/ejss.12055

Applications of X-ray computed tomography for examining biophysical interactions and structural development in soil systems: a review

A - Papers appearing in refereed journals

Helliwell, J. R., Sturrock, C. J., Grayling, K. M., Tracy, S. R., Flavel, R. J., Young, I. M., Whalley, W. R. and Mooney, S. J. 2013. Applications of X-ray computed tomography for examining biophysical interactions and structural development in soil systems: a review. European Journal of Soil Science. 64 (3), pp. 279-297. https://doi.org/10.1111/ejss.12028

Soil physics: new approaches and emerging challenges

A - Papers appearing in refereed journals

Hallett, P., Mooney, S. and Whalley, W. R. 2013. Soil physics: new approaches and emerging challenges. European Journal of Soil Science. 64 (3), pp. 277-278. https://doi.org/10.1111/ejss.12053

Transcriptional changes of the root-knot nematode Meloidogyne incognita in response to Arabidopsis thaliana root signals

A - Papers appearing in refereed journals

Teillet, A., Dybal, K., Kerry, B. R., Miller, A. J., Curtis, R. H. C. and Hedden, P. 2013. Transcriptional changes of the root-knot nematode Meloidogyne incognita in response to Arabidopsis thaliana root signals. PLOS ONE. 8, p. e61259. https://doi.org/10.1371/journal.pone.0061259

Field sampling for environmental science and management

E - Books edited/written by staff member, alone/with others

Webster, R. and Lark, R. M. 2013. Field sampling for environmental science and management. Routledge Abingdon.

Modification of the RothC model for simulations of soil organic C dynamics in dryland regions

A - Papers appearing in refereed journals

Farina, R., Coleman, K. and Whitmore, A. P. 2013. Modification of the RothC model for simulations of soil organic C dynamics in dryland regions. Geoderma. 200-201, pp. 18-30. https://doi.org/10.1016/j.geoderma.2013.01.021

Genotypic variation in the ability of wheat roots to penetrate wax layers

A - Papers appearing in refereed journals

Whalley, W. R., Dodd, I. C., Watts, C. W., Webster, C. P., Phillips, A. L., Andralojc, P. J., White, Robin P., Davies, W. J. and Parry, M. A. J. 2013. Genotypic variation in the ability of wheat roots to penetrate wax layers. Plant and Soil. 364, pp. 171-179. https://doi.org/10.1007/s11104-012-1342-0

Natural capital and ecosystem services, developing an appropriate soils framework as a basis for valuation

A - Papers appearing in refereed journals

Robinson, D. A., Hockley, N., Cooper, D. M., Emmett, B. A., Keith, A. M., Lebron, I., Reynolds, B., Tipping, E., Tye, A. M., Watts, C. W., Whalley, W. R., Black, H. I. J., Warren, G. P. and Robinson, J. S. 2013. Natural capital and ecosystem services, developing an appropriate soils framework as a basis for valuation. Soil Biology and Biochemistry. 57, pp. 1023-1033. https://doi.org/10.1016/j.soilbio.2012.09.008

Nutrient management in support of environmental and agricultural sustainability

A - Papers appearing in refereed journals

Whitmore, A. P., Goulding, K. W. T., Glendining, M. J., Dailey, A. G., Coleman, K. and Powlson, D. S. 2012. Nutrient management in support of environmental and agricultural sustainability. Sustainability. 4 (10), pp. 2513-2524. https://doi.org/10.3390/su4102513

The velocity of shear waves in unsaturated soil

A - Papers appearing in refereed journals

Whalley, W. R., Jenkins, M. and Attenborough, K. 2012. The velocity of shear waves in unsaturated soil. Soil & Tillage Research. 125, pp. 30-37. https://doi.org/10.1016/j.still.2012.05.013

The effect of compaction and shear deformation of saturated soil on hydraulic conductivity

A - Papers appearing in refereed journals

Whalley, W. R., Matthews, G. P. and Ferraris, S. 2012. The effect of compaction and shear deformation of saturated soil on hydraulic conductivity. Soil & Tillage Research. 125, pp. 23-29. https://doi.org/10.1016/j.still.2012.05.020

Carbon sequestration in soils - has the concept been over-sold?

C2 - Non-edited contributions to conferences

Powlson, D. S., Whitmore, A. P. and Goulding, K. W. T. 2012. Carbon sequestration in soils - has the concept been over-sold? Abstracts BSSS Annual Meeting: Soil Science and Food Security, Loughborough, 4-5 September 2012 .

Spatial prediction of soil organic carbon from data in large and variable spatial supports. II. Mapping temporal change

A - Papers appearing in refereed journals

Orton, T. G., Saby, N. P. A., Arrouays, D., Walter, C., Lemercier, B., Schvartz, C. and Lark, R. M. 2012. Spatial prediction of soil organic carbon from data in large and variable spatial supports. II. Mapping temporal change. Environmetrics. 23 (2), pp. 148-161. https://doi.org/10.1002/env.2134

Spatial prediction of soil organic carbon from data in large and variable spatial supports. I. Inventory and mapping

A - Papers appearing in refereed journals

Orton, T. G., Saby, N. P. A., Arrouays, D., Walter, C., Lemercier, B., Schvartz, C. and Lark, R. M. 2012. Spatial prediction of soil organic carbon from data in large and variable spatial supports. I. Inventory and mapping. Environmetrics. 23 (2), pp. 129-147. https://doi.org/10.1002/env.2136

Root respiration of barley in a semiarid Mediterranean agroecosystem: field and modelling approaches

A - Papers appearing in refereed journals

Morell, F. J., Whitmore, A. P., Alvaro-Fuentes, J., Lampurlanes, J. and Cantero-Martinez, C. 2012. Root respiration of barley in a semiarid Mediterranean agroecosystem: field and modelling approaches. Plant and Soil. 351, pp. 135-147. https://doi.org/10.1007/s11104-011-0938-0

Spatially explicit modelling of changes in soil organic C in agricultural soils in Italy, 2001-2010: potential for compost amendment

A - Papers appearing in refereed journals

Mondini, C., Coleman, K. and Whitmore, A. P. 2012. Spatially explicit modelling of changes in soil organic C in agricultural soils in Italy, 2001-2010: potential for compost amendment. Agriculture, Ecosystems & Environment. 153, pp. 24-32. https://doi.org/10.1016/j.agee.2012.02.020

Commentary: Developing sustainable farming systems by valuing ecosystem services

A - Papers appearing in refereed journals

Goulding, K. W. T. and Whitmore, A. P. 2012. Commentary: Developing sustainable farming systems by valuing ecosystem services. International Journal of Agricultural Sustainability. 10, pp. 5-7. https://doi.org/10.1080/14735903.2012.652378

The effects of compaction and soil drying on penetrometer resistance

A - Papers appearing in refereed journals

Gao, W., Watts, C. W., Ren, T. and Whalley, W. R. 2012. The effects of compaction and soil drying on penetrometer resistance. Soil & Tillage Research. 125, pp. 14-22. https://doi.org/10.1016/j.still.2012.07.006

Predicting penetrometer resistance from the compression characteristic of soil

A - Papers appearing in refereed journals

Gao, W., Ren, T., Bengough, A. G., Auneau, L., Watts, C. W. and Whalley, W. R. 2012. Predicting penetrometer resistance from the compression characteristic of soil. Soil Science Society of America Journal. 76, pp. 361-369. https://doi.org/10.2136/sssaj2011.0217

Changes in soil organic carbon and climate change - Application of the RothC model in agro-silvo-pastoral Mediterranean systems

A - Papers appearing in refereed journals

Francaviglia, R., Coleman, K., Whitmore, A. P., Doro, L., Urracci, G., Rubino, M. and Ledda, L. 2012. Changes in soil organic carbon and climate change - Application of the RothC model in agro-silvo-pastoral Mediterranean systems. Agricultural Systems. 112, pp. 48-54. https://doi.org/10.1016/j.agsy.2012.07.001

Roots, water and nutrient acquisition: let's get physical

A - Papers appearing in refereed journals

Chapman, N., Miller, A. J., Lindsey, K. and Whalley, W. R. 2012. Roots, water and nutrient acquisition: let's get physical. Trends in Plant Science. 17 (12), pp. 701-710. https://doi.org/10.1016/j.tplants.2012.08.001

Resolving the spatial variability of soil N using fractions of soil organic matter

A - Papers appearing in refereed journals

Cordova, C., Sohi, S. P., Lark, R. M., Goulding, K. W. T. and Robinson, J. S. 2012. Resolving the spatial variability of soil N using fractions of soil organic matter. Agriculture, Ecosystems & Environment. 147, pp. 66-72. https://doi.org/10.1016/j.agee.2011.06.016

Using the NAG library to help analyse the variation in data from the environment

G - Articles in popular magazines and other technical publications

Milne, A. E. and Lark, R. M. 2012. Using the NAG library to help analyse the variation in data from the environment. NAG News. 110, p. http://www.nag.co.uk/IndustryArticles/nag_for_environment_research.pdf.

Advances in the understanding of nutrient dynamics and management in UK agriculture

A - Papers appearing in refereed journals

Dungait, J. A. J., Cardenas, L. M., Blackwell, M. S. A., Wu, L., Withers, P. J. A., Chadwick, D. R., Bol, R., Murray, P. J., Macdonald, A. J., Whitmore, A. P. and Goulding, K. W. T. 2012. Advances in the understanding of nutrient dynamics and management in UK agriculture. Science of the Total Environment. 434 (15 September), pp. 39-50. https://doi.org/10.1016/j.scitotenv.2012.04.029

Influence of organic matter on rheological properties of soil

A - Papers appearing in refereed journals

Markgraf, W., Watts, C. W., Whalley, W. R., Hrkac, T. and Horn, R. 2012. Influence of organic matter on rheological properties of soil. Applied Clay Science. 64, pp. 25-33. https://doi.org/10.1016/j.clay.2011.04.009

The effect of agricultural land use on the nature and dynamics of subsoil

C2 - Non-edited contributions to conferences

Gregory, A. S., Dungait, J. A. J., Dixon, E. R., Bol, R. and Whitmore, A. P. 2012. The effect of agricultural land use on the nature and dynamics of subsoil. Abstracts 4th International Congress Eurosoil, Bari, 2-6 July 2012 . pp. 387

Soil organic matter turnover is governed by accessibility not recalcitrance

A - Papers appearing in refereed journals

Dungait, J. A. J., Hopkins, D. W., Gregory, A. S. and Whitmore, A. P. 2012. Soil organic matter turnover is governed by accessibility not recalcitrance. Global Change Biology. 18 (6), pp. 1781-1796. https://doi.org/10.1111/j.1365-2486.2012.02665.x

Isotope fractionation factors controlling isotopologue signatures of soil-emitted N2O produced by denitrification processes of various rates

C2 - Non-edited contributions to conferences

Lewicka-Szczebak, D., Well, R., Cardenas, L. M., Matthews, P., Misselbrook, T. H., Bol, R., Whalley, W. R. and Gregory, A. S. 2012. Isotope fractionation factors controlling isotopologue signatures of soil-emitted N2O produced by denitrification processes of various rates. Abstracts 6th International Symposium on Isotopomers, Washington, DC, 18-22 June 2012 . pp. 51

A dual porous model to predict the effects of soil structure on denitrification and N2O emission

C2 - Non-edited contributions to conferences

Laudone, G. M., Matthews, G. P., Bird, N. R. A., Whalley, W. R., Cardenas, L. M. and Gregory, A. S. 2012. A dual porous model to predict the effects of soil structure on denitrification and N2O emission. Abstracts 4th International Congress Eurosoil 2012, Bari, 2-6 July 2012 .

Cost-effective sampling strategies for soil management (HGCA Project Report No. 485)

D1 - Technical reports: non-confidential

Marchant, B. P., Dailey, A. G. and Lark, R. M. 2012. Cost-effective sampling strategies for soil management (HGCA Project Report No. 485). Home Grown Cereals Authority (HGCA) Kenilworth.

Generic issues on broad-scale soil monitoring schemes: a review

A - Papers appearing in refereed journals

Arrouays, D., Marchant, B. P., Saby, N. P. A., Meersmans, J., Orton, T. G., Martin, M. P., Bellamy, P. H., Lark, R. M. and Kibblewhite, M. 2012. Generic issues on broad-scale soil monitoring schemes: a review. Pedosphere. 22 (4), pp. 456-469. https://doi.org/10.1016/S1002-0160(12)60031-9

Shortcomings in wheat yield predictions

A - Papers appearing in refereed journals

Semenov, M. A., Mitchell, R. A. C., Whitmore, A. P., Hawkesford, M. J., Parry, M. A. J. and Shewry, P. R. 2012. Shortcomings in wheat yield predictions. Nature Climate Change. 2, pp. 380-382. https://doi.org/10.1038/nclimate1511

An assessment of a new model of dynamic fragmentation of soil with test data

A - Papers appearing in refereed journals

Gregory, A. S., Bird, N. R. A., Watts, C. W. and Whitmore, A. P. 2012. An assessment of a new model of dynamic fragmentation of soil with test data. Soil & Tillage Research. 120, pp. 61-68. https://doi.org/10.1016/j.still.2011.11.007

The potential to increase soil carbon stocks through reduced tillage or organic material additions in England and Wales: a case study

A - Papers appearing in refereed journals

Powlson, D. S., Bhogal, A., Chambers, B. J., Coleman, K., Macdonald, A. J., Goulding, K. W. T. and Whitmore, A. P. 2012. The potential to increase soil carbon stocks through reduced tillage or organic material additions in England and Wales: a case study. Agriculture, Ecosystems & Environment. 146, pp. 23-33. https://doi.org/10.1016/j.agee.2011.10.004

Methylated arsenic species in plants originate from soil microorganisms

A - Papers appearing in refereed journals

Lomax, C., Liu, W-J., Wu, Liyou, Xue, K., Xiong, J., Zhou, J., McGrath, S. P., Meharg, A. A., Miller, A. J. and Zhao, F-J. 2012. Methylated arsenic species in plants originate from soil microorganisms. New Phytologist. 193 (3), pp. 665-672. https://doi.org/10.1111/j.1469-8137.2011.03956.x

Statistical methods for estimating petroleum resources

A - Papers appearing in refereed journals

Lark, R. M. 2011. Statistical methods for estimating petroleum resources. Journal of the Royal Statistical Society, Series A (Statistics in Society). 174, pp. 513-513. https://doi.org/10.1111/j.1467-985X.2010.00681_13.x

Spatially nested sampling schemes for spatial variance components: scope for their optimization

A - Papers appearing in refereed journals

Lark, R. M. 2011. Spatially nested sampling schemes for spatial variance components: scope for their optimization. Computers & Geosciences. 37, pp. 1633-1641. https://doi.org/10.1016/j.cageo.2010.12.010

Exploring the variation in soil saturated hydraulic conductivity under a tropical rainforest using the wavelet transform

A - Papers appearing in refereed journals

Hassler, S. K., Lark, R. M., Milne, A. E. and Elsenbeer, H. 2011. Exploring the variation in soil saturated hydraulic conductivity under a tropical rainforest using the wavelet transform. European Journal of Soil Science. 62 (6), pp. 891-901. https://doi.org/10.1111/j.1365-2389.2011.01400.x

Genetic and management approaches to boost UK wheat yields by ameliorating water deficits

A - Papers appearing in refereed journals

Dodd, I. C., Whalley, W. R., Ober, E. S. and Parry, M. A. J. 2011. Genetic and management approaches to boost UK wheat yields by ameliorating water deficits. Journal of Experimental Botany. 62, pp. 5241-5248. https://doi.org/10.1093/jxb/err242

Robust geostatistical prediction of trace elements across France

A - Papers appearing in refereed journals

Saby, N. P. A., Marchant, B. P., Lark, R. M., Jolivet, C. C. and Arrouays, D. 2011. Robust geostatistical prediction of trace elements across France. Geoderma. 162 (3-4), pp. 303-311. https://doi.org/10.1016/j.geoderma.2011.03.001

Wavelet analysis of soil variation at nanometre- to micrometre-scales: an example of organic carbon content in a micro-aggregate

A - Papers appearing in refereed journals

Milne, A. E., Lehmann, J., Solomon, D. and Lark, R. M. 2011. Wavelet analysis of soil variation at nanometre- to micrometre-scales: an example of organic carbon content in a micro-aggregate. European Journal of Soil Science. 62 (4), pp. 617-628. https://doi.org/10.1111/j.1365-2389.2011.01352.x

Spatial prediction of soil properties with copulas

A - Papers appearing in refereed journals

Marchant, B. P., Saby, N. P. A., Jolivet, C. C., Arrouays, D. and Lark, R. M. 2011. Spatial prediction of soil properties with copulas. Geoderma. 162, pp. 327-334. https://doi.org/10.1016/j.geoderma.2011.03.005

A model to predict the effects of soil structure on denitrification and N2O emission

A - Papers appearing in refereed journals

Laudone, G. M., Matthews, G. P., Bird, N. R. A., Whalley, W. R., Cardenas, L. M. and Gregory, A. S. 2011. A model to predict the effects of soil structure on denitrification and N2O emission. Journal of Hydrology. 409, pp. 283-290. https://doi.org/10.1016/j.jhydrol.2011.08.026

Pedometrics

A - Papers appearing in refereed journals

Lark, R. M. 2011. Pedometrics. European Journal of Soil Science. 62 (3), pp. 335-336. https://doi.org/10.1111/j.1365-2389.2011.01370.x

A comparison of soil and water properties in organic and conventional farming systems in England

A - Papers appearing in refereed journals

Hathaway-Jenkins, L. J., Sakrabani, R., Pearce, B., Whitmore, A. P. and Godwin, R. J. 2011. A comparison of soil and water properties in organic and conventional farming systems in England. Soil Use and Management. 27 (2), pp. 133-142. https://doi.org/10.1111/j.1475-2743.2011.00335.x

Transporters involved in nitrogen uptake and movement

B - Book chapters etc edited externally

Miller, A. J. and Chapman, N. 2011. Transporters involved in nitrogen uptake and movement. in: Hawkesford, M. J. and Barraclough, P. B. (ed.) Molecular and physiological basis of nutrient use efficiency in crops John Wiley & Sons Chichester, West Sussex. pp. 193-210

Developmental pattern of aquaporin expression in barley (Hordeum vulgare L.) leaves

A - Papers appearing in refereed journals

Besse, M., Knipfer, T., Miller, A. J., Verdeil, J-L., Jahn, T. P. and Fricke, W. 2011. Developmental pattern of aquaporin expression in barley (Hordeum vulgare L.) leaves. Journal of Experimental Botany. 62, pp. 4127-4142. https://doi.org/10.1093/jxb/err175

The velocity of shear waves in saturated soil

A - Papers appearing in refereed journals

Whalley, W. R., Jenkins, M. and Attenborough, K. 2011. The velocity of shear waves in saturated soil. Soil Science Society of America Journal. 75, pp. 1652-1657. https://doi.org/10.2136/sssaj2010.0449

Review of the evidence base for the status and change of soil carbon below 15cm from the soil surface in England and Wales (Report on Sub-project 3 of DEFRA Project SP1106)

D1 - Technical reports: non-confidential

Gregory, A. S., Whitmore, A. P., Kirk, G. J. D., Rawlins, B. G., Ritz, K. and Wallace, P. 2011. Review of the evidence base for the status and change of soil carbon below 15cm from the soil surface in England and Wales (Report on Sub-project 3 of DEFRA Project SP1106). Department for Environment, Food and Rural Affairs (DEFRA).

Water supply and not nitrate concentration determines primary root growth in Arabidopsis

A - Papers appearing in refereed journals

Chapman, N., Whalley, W. R., Lindsey, K. and Miller, A. J. 2011. Water supply and not nitrate concentration determines primary root growth in Arabidopsis. Plant, Cell and Environment. 34 (10), pp. 1630-1638. https://doi.org/10.1111/j.1365-3040.2011.02358.x

Drought stress, effect on soil mechanical impedance and root (crop) growth

G - Articles in popular magazines and other technical publications

Whalley, W. R. and Clark, L. J. 2011. Drought stress, effect on soil mechanical impedance and root (crop) growth.

Crop emergence, the impact of mechanical impedance

B - Book chapters etc edited externally

Whalley, W. R. and Finch-Savage, W. E. 2011. Crop emergence, the impact of mechanical impedance. in: Glinski, J., Lipiec, J. and Horabik, J. (ed.) Encyclopedia of agrophysics Springer, Dordrecht. pp. 163-167

Geostatistical prediction of nitrous oxide emissions from soil using data, process models and expert opinion

A - Papers appearing in refereed journals

Orton, T. G., Goulding, K. W. T. and Lark, R. M. 2011. Geostatistical prediction of nitrous oxide emissions from soil using data, process models and expert opinion. European Journal of Soil Science. 62 (3), pp. 359-370. https://doi.org/10.1111/j.1365-2389.2011.01367.x

Wavelet analysis of the correlations between soil properties and potential nitrous oxide emission at farm and landscape scales

A - Papers appearing in refereed journals

Milne, A. E., Haskard, K. A., Webster, C. P., Truan, I. A., Goulding, K. W. T. and Lark, R. M. 2011. Wavelet analysis of the correlations between soil properties and potential nitrous oxide emission at farm and landscape scales. European Journal of Soil Science. 62 (3), pp. 467-478. https://doi.org/10.1111/j.1365-2389.2011.01361.x

Spatial expression and regulation of rice high-affinity nitrate transporters by nitrogen and carbon status

A - Papers appearing in refereed journals

Feng, H., Yan, M., Fan, X., Li, B., Shen, Q., Miller, A. J. and Xu, G. 2011. Spatial expression and regulation of rice high-affinity nitrate transporters by nitrogen and carbon status. Journal of Experimental Botany. 62, pp. 2319-2332. https://doi.org/10.1093/jxb/erq403

Effect of soil saturation on denitrification in a grassland soil

C2 - Non-edited contributions to conferences

Cardenas, L. M., Butler, M., Gregory, A. S., Matthews, G. P., Whalley, W. R., Bird, N. R. A., Misselbrook, T. H., Laudone, G. M. and Scholefield, D. 2011. Effect of soil saturation on denitrification in a grassland soil. Abstracts Conference on Nitrogen and Global Change: Key Findings - Future Challenges, Edinburgh, 11-15 April 2011 .

Soil engineering in vivo: harnessing natural biogeochemical systems for sustainable, multi-functional engineering solutions

A - Papers appearing in refereed journals

Dejong, J. T., Soga, K., Banwart, S. A., Whalley, W. R., Ginn, T. R., Nelson, D. C., Mortensen, B. M., Martinez, B. C. and Barkouki, T. 2011. Soil engineering in vivo: harnessing natural biogeochemical systems for sustainable, multi-functional engineering solutions. Journal of the Royal Society Interface. 8, pp. 1-15. https://doi.org/10.1098/rsif.2010.0270

Soil management in relation to sustainable agriculture and ecosystem services

A - Papers appearing in refereed journals

Powlson, D. S., Gregory, P. J., Whalley, W. R., Quinton, J. N., Hopkins, D. W., Whitmore, A. P., Hirsch, P. R. and Goulding, K. W. T. 2011. Soil management in relation to sustainable agriculture and ecosystem services. Food Policy. 36, pp. S72-S87. https://doi.org/10.1016/j.foodpol.2010.11.025

Soil organic matters

A - Papers appearing in refereed journals

Powlson, D. S., Brookes, P. C., Whitmore, A. P., Goulding, K. W. T. and Hopkins, D. W. 2011. Soil organic matters. European Journal of Soil Science. 62 (1), pp. 1-4. https://doi.org/10.1111/j.1365-2389.2010.01338.x

Transport systems for NO3- and NH4+

B - Book chapters etc edited externally

Orsel, M. and Miller, A. J. 2011. Transport systems for NO3- and NH4+. in: Foyer, C. H. and Zhang, H. (ed.) Nitrogen metabolism in plants in the post-genomic era (Annual Plant Reviews Vol. 42) Blackwell Publishing Oxford. pp. 83-102

Estimating soil strength in the rooting zone of wheat

A - Papers appearing in refereed journals

Whitmore, A. P., Whalley, W. R., Bird, N. R. A., Watts, C. W. and Gregory, A. S. 2011. Estimating soil strength in the rooting zone of wheat. Plant and Soil. 339, pp. 363-375. https://doi.org/10.1007/s11104-010-0588-7

Implications for soil properties of removing cereal straw: results from long-term studies

A - Papers appearing in refereed journals

Powlson, D. S., Glendining, M. J., Coleman, K. and Whitmore, A. P. 2011. Implications for soil properties of removing cereal straw: results from long-term studies. Agronomy Journal. 103, pp. 279-287. https://doi.org/10.2134/agronj2010.0146s

Soil carbon sequestration to mitigate climate change: a critical re-examination to identify the true and the false

A - Papers appearing in refereed journals

Powlson, D. S., Whitmore, A. P. and Goulding, K. W. T. 2011. Soil carbon sequestration to mitigate climate change: a critical re-examination to identify the true and the false. European Journal of Soil Science. 62 (1), pp. 42-55. https://doi.org/10.1111/j.1365-2389.2010.01342.x

Pedotransfer functions for estimating total soil nitrogen up to the global scale

A - Papers appearing in refereed journals

Glendining, M. J., Dailey, A. G., Powlson, D. S., Richter, G. M., Catt, J. A. and Whitmore, A. P. 2011. Pedotransfer functions for estimating total soil nitrogen up to the global scale. European Journal of Soil Science. 62 (1), pp. 13-22. https://doi.org/10.1111/j.1365-2389.2010.01336.x

Effects of recent and accumulated livestock manure carbon additions on soil fertility and quality

A - Papers appearing in refereed journals

Bhogal, A., Nicholson, F. A., Young, I., Sturrock, C., Whitmore, A. P. and Chambers, B. J. 2011. Effects of recent and accumulated livestock manure carbon additions on soil fertility and quality. European Journal of Soil Science. 62 (1), pp. 174-181. https://doi.org/10.1111/j.1365-2389.2010.01319.x

Nitrate transporters and root architecture

B - Book chapters etc edited externally

Chapman, N. and Miller, A. J. 2011. Nitrate transporters and root architecture. in: Geisler, M. and Venema, K. (ed.) Transporters and pumps in plant signaling Springer, Berlin. pp. 165-190

Short-term effects of coumarin along the maize primary root axis

A - Papers appearing in refereed journals

Lupini, A., Sorgon, A., Miller, A. J. and Abenavoli, M. R. 2010. Short-term effects of coumarin along the maize primary root axis. Plant Signaling and Behavior. 5 (11), pp. 1395-400. https://doi.org/10.4161/psb.5.11.13021

Estimating changes in Scottish soil carbon stocks using ECOSSE. II. Application

A - Papers appearing in refereed journals

Smith, J., Gottschalk, P., Bellarby, J., Chapman, S., Lilly, A., Towers, W., Bell, J., Coleman, K., Nayak, D., Richards, M., Hillier, J., Flynn, H., Wattenbach, M., Aitkenhead, M., Yeluripati, J., Farmer, J., Milne, R., Thomson, A., Evans, C., Whitmore, A. P., Falloon, P. and Smith, P. 2010. Estimating changes in Scottish soil carbon stocks using ECOSSE. II. Application. Climate Research. 45, pp. 193-205. https://doi.org/10.3354/cr00902

Estimating changes in Scottish soil carbon stocks using ECOSSE. I. Model description and uncertainties

A - Papers appearing in refereed journals

Smith, J., Gottschalk, P., Bellarby, J., Chapman, S., Lilly, A., Towers, W., Bell, J., Coleman, K., Nayak, D., Richards, M., Hillier, J., Flynn, H., Wattenbach, M., Aitkenhead, M., Yeluripati, J., Farmer, J., Milne, R., Thomson, A., Evans, C., Whitmore, A. P., Falloon, P. and Smith, P. 2010. Estimating changes in Scottish soil carbon stocks using ECOSSE. I. Model description and uncertainties. Climate Research. 45, pp. 179-192. https://doi.org/10.3354/cr00899

Soil carbon sequestration for mitigating climate change: distinguishing the genuine from the imaginary

B - Book chapters etc edited externally

Powlson, D. S., Whitmore, A. P. and Goulding, K. W. T. 2010. Soil carbon sequestration for mitigating climate change: distinguishing the genuine from the imaginary. in: Hillel, D. and Rosenzweig, C. (ed.) Handbook of climate change and agroecosystems Imperial College Press, London. pp. 393-402

Spectral tempering to model non-stationary covariance of nitrous oxide emissions from soil using continuous or categorical explanatory variables at a landscape scale

A - Papers appearing in refereed journals

Haskard, K. A., Welham, S. J. and Lark, R. M. 2010. Spectral tempering to model non-stationary covariance of nitrous oxide emissions from soil using continuous or categorical explanatory variables at a landscape scale. Geoderma. 159, pp. 358-370. https://doi.org/10.1016/j.geoderma.2010.08.012

Spectral tempering to model non-stationary variation of soil properties: sensitivity to the initial stationary model

A - Papers appearing in refereed journals

Haskard, K. A. and Lark, R. M. 2010. Spectral tempering to model non-stationary variation of soil properties: sensitivity to the initial stationary model. Geoderma. 159, pp. 350-357. https://doi.org/10.1016/j.geoderma.2010.08.011

Separating the effects of water and nitrate stress on root system architecture

C2 - Non-edited contributions to conferences

Chapman, N., Whalley, W. R., Miller, A. J. and Lindsey, K. 2010. Separating the effects of water and nitrate stress on root system architecture. Abstracts 15th International Workshop on Plant Membrane Biology, Adelaide, 19-24 September 2010 . pp. 61

Changes in soil pH across England and Wales in response to decreased acid deposition

A - Papers appearing in refereed journals

Kirk, G. J. D., Bellamy, P. H. and Lark, R. M. 2010. Changes in soil pH across England and Wales in response to decreased acid deposition. Global Change Biology. 16 (11), pp. 3111-3119. https://doi.org/10.1111/j.1365-2486.2009.02135.x

Investigating the effect of previous treatments on wheat biomass over multiple spatial frequencies

A - Papers appearing in refereed journals

Milne, A. E., Castellanos, M. T., Cartagena, M. C., Tarquis, A. M. and Lark, R. M. 2010. Investigating the effect of previous treatments on wheat biomass over multiple spatial frequencies. Biogeosciences. 7, pp. 2739-2747. https://doi.org/10.5194/bg-7-2739-2010

Properties and physiological roles of plant potassium channels activated by reactive oxygen species

C2 - Non-edited contributions to conferences

Demidchik, V., Cuin, T. A., Svistunenko, D., Shabala, S., Smith, S. J., Miller, A. J., Sokolik, A. and Yurin, V. 2010. Properties and physiological roles of plant potassium channels activated by reactive oxygen species. Abstracts 15th International Workshop on Plant Membrane Biology, Adelaide, 19-24 September 2010 . pp. 55

A linear mixed model, with non-stationary mean and covariance, for soil potassium based on gamma radiometry

A - Papers appearing in refereed journals

Haskard, K. A., Rawlins, B. G. and Lark, R. M. 2010. A linear mixed model, with non-stationary mean and covariance, for soil potassium based on gamma radiometry. Biogeosciences. 7, pp. 2081-2089. https://doi.org/10.5194/bg-7-2081-2010

Root water potential integrates discrete soil physical properties to influence ABA signalling during partial rootzone drying

A - Papers appearing in refereed journals

Dodd, I. C., Egea, G., Watts, C. W. and Whalley, W. R. 2010. Root water potential integrates discrete soil physical properties to influence ABA signalling during partial rootzone drying. Journal of Experimental Botany. 61, pp. 3543-3551. https://doi.org/10.1093/jxb/erq195

Two contrasting spatial processes with a common variogram: inference about spatial models from higher-order statistics

A - Papers appearing in refereed journals

Lark, R. M. 2010. Two contrasting spatial processes with a common variogram: inference about spatial models from higher-order statistics. European Journal of Soil Science. 61 (4), pp. 479-492. https://doi.org/10.1111/j.1365-2389.2010.01258.x

Arabidopsis root K+-efflux conductance activated by hydroxyl radicals: single-channel properties, genetic basis and involvement in stress-induced cell death

A - Papers appearing in refereed journals

Demidchik, V., Cuin, T. A., Svistunenko, D., Smith, S. J., Miller, A. J., Shabala, S., Sokolik, A. and Yurin, V. 2010. Arabidopsis root K+-efflux conductance activated by hydroxyl radicals: single-channel properties, genetic basis and involvement in stress-induced cell death. Journal Of Cell Science. 123, pp. 1468-1479. https://doi.org/10.1242/jcs.064352

Spectral and wavelet analysis of gilgai patterns from air photography

A - Papers appearing in refereed journals

Milne, A. E., Webster, R. and Lark, R. M. 2010. Spectral and wavelet analysis of gilgai patterns from air photography. Australian journal of soil research. 48, pp. 309-325. https://doi.org/10.1071/SR09189

Measurement and simulation of the effect of compaction on the pore structure and saturated hydraulic conductivity of grassland and arable soil

A - Papers appearing in refereed journals

Matthews, G. P., Laudone, G. M., Gregory, A. S., Bird, N. R. A., Matthews, A. G. De G. and Whalley, W. R. 2010. Measurement and simulation of the effect of compaction on the pore structure and saturated hydraulic conductivity of grassland and arable soil. Water Resources Research. 46, p. W05501 (13pp). https://doi.org/10.1029/2009WR007720

Estimating relative hydraulic conductivity from the water release characteristic of a shrinking clay soil

A - Papers appearing in refereed journals

Gregory, A. S., Bird, N. R. A., Whalley, W. R. and Matthews, G. P. 2010. Estimating relative hydraulic conductivity from the water release characteristic of a shrinking clay soil. Soil Science Society of America Journal. 74, pp. 1113-1118. https://doi.org/10.2136/sssaj2009.0356

Deformation and shrinkage effects on the soil water release characteristic

A - Papers appearing in refereed journals

Gregory, A. S., Bird, N. R. A., Whalley, W. R., Matthews, G. P. and Young, I. M. 2010. Deformation and shrinkage effects on the soil water release characteristic. Soil Science Society of America Journal. 74, pp. 1104-1112. https://doi.org/10.2136/sssaj2009.0278

Plant nitrogen nutrition and transport

G - Articles in popular magazines and other technical publications

Miller, A. J. 2010. Plant nitrogen nutrition and transport. https://doi.org/10.1002/9780470015902.a0021257

A dual-porous, biophysical void structure model of soil for the understanding of the conditions causing nitrous oxide emission

C2 - Non-edited contributions to conferences

Matthews, G. P., Laudone, G. M., Whalley, W. R., Bird, N. R. A., Gregory, A. S., Cardenas, L. M. and Misselbrook, T. H. 2010. A dual-porous, biophysical void structure model of soil for the understanding of the conditions causing nitrous oxide emission. European Geosciences Union (EGU).

Soil management and grass species effects on the hydraulic properties of shrinking soils

A - Papers appearing in refereed journals

Gregory, A. S., Webster, C. P., Watts, C. W., Whalley, W. R., Macleod, C. J. A., Joynes, A., Papadopoulos, A., Haygarth, P. M., Binley, A., Humphreys, M. W., Turner, L. B., Skot, L. and Matthews, G. P. 2010. Soil management and grass species effects on the hydraulic properties of shrinking soils. Soil Science Society of America Journal. 74, pp. 753-761. https://doi.org/10.2136/sssaj2009.0284

Are root exudates more important than other sources of rhizodeposits in structuring rhizosphere bacterial communities?

A - Papers appearing in refereed journals

Dennis, P. G., Miller, A. J. and Hirsch, P. R. 2010. Are root exudates more important than other sources of rhizodeposits in structuring rhizosphere bacterial communities? FEMS Microbiology Ecology. 72 (3), pp. 313-327. https://doi.org/10.1111/j.1574-6941.2010.00860.x

Enhancing the value of field experimentation through whole-of-block designs

A - Papers appearing in refereed journals

Panten, K., Bramley, R. G. V., Lark, R. M. and Bishop, T. F. A. 2010. Enhancing the value of field experimentation through whole-of-block designs. Precision Agriculture. 11, pp. 198-213. https://doi.org/10.1007/s11119-009-9128-y

Robust analysis of soil properties at the national scale: cadmium content of French soils

A - Papers appearing in refereed journals

Marchant, B. P., Saby, N. P. A., Lark, R. M., Bellamy, P. H., Jolivet, C. C. and Arrouays, D. 2010. Robust analysis of soil properties at the national scale: cadmium content of French soils. European Journal of Soil Science. 61 (1), pp. 144-152. https://doi.org/10.1111/j.1365-2389.2009.01212.x

Plant homologs of the Plasmodium falciparum chloroquine-resistance transporter, Pf CRT, are required for glutathione homeostasis and stress responses

A - Papers appearing in refereed journals

Maughan, S. C., Pasternak, M., Cairns, N., Kiddle, G., Brach, T., Jarvis, R., Haas, F., Nieuwland, J., Lim, B., Müller, C., Salcedo-Sora, E., Kruse, C., Orsel, M., Hell, R., Miller, A. J., Bray, P., Foyer, C. H., Murray, J. A. H., Meyer, A. J. and Cobbett, C. S. 2010. Plant homologs of the Plasmodium falciparum chloroquine-resistance transporter, Pf CRT, are required for glutathione homeostasis and stress responses. Proceedings of the National Academy of Sciences. 107, pp. 2331-2336. https://doi.org/10.1073/pnas.0913689107

Sampling procedures for throughfall monitoring: a simulation study

A - Papers appearing in refereed journals

Zimmermann, B., Zimmermann, A., Lark, R. M. and Elsenbeer, H. 2010. Sampling procedures for throughfall monitoring: a simulation study. Water Resources Research. 46, p. W01503. https://doi.org/10.1029/2009WR007776

The relationship between diffuse spectral reflectance of the soil and its cation exchange capacity is scale-dependent

A - Papers appearing in refereed journals

Savvides, A., Corstanje, R., Baxter, S. J., Rawlins, B. G. and Lark, R. M. 2010. The relationship between diffuse spectral reflectance of the soil and its cation exchange capacity is scale-dependent. Geoderma. 154, pp. 353-358. https://doi.org/10.1016/j.geoderma.2009.11.007

Non-homogeneity of variance components from spatially nested sampling of the soil

A - Papers appearing in refereed journals

Lark, R. M. and Corstanje, R. 2009. Non-homogeneity of variance components from spatially nested sampling of the soil. European Journal of Soil Science. 60 (3), pp. 443-452. https://doi.org/10.1111/j.1365-2389.2009.01133.x

Using advanced methods to reduce the cost of soil sampling: ideas for the future

G - Articles in popular magazines and other technical publications

Lark, R. M. and Marchant, B. P. 2009. Using advanced methods to reduce the cost of soil sampling: ideas for the future.

Long-term effects of fertilizing systems on soil microstructure: rheological investigations of Rothamsted soils classifying stiffness degradation

C2 - Non-edited contributions to conferences

Markgraf, W., Horn, R., Watts, C. W. and Whalley, W. R. 2009. Long-term effects of fertilizing systems on soil microstructure: rheological investigations of Rothamsted soils classifying stiffness degradation. ISTRO 18th Triennial Conference Proceedings, Izmir, Turkey, 15-19 June 2009 . pp. T4-025-1-8

Linking plant biology and soil physics to understand hillslope hydrology

C2 - Non-edited contributions to conferences

Macleod, C. J. A., Binley, A., Clark, L. J., Gregory, A. S., Hawkins, S. L., Humphreys, M., Joynes, A., Papdopoulos, A., Skot, L., Stone, A., Turner, L. B., Watts, C. W., Webster, C. P., Whalley, W. R. and Haygarth, P. M. 2009. Linking plant biology and soil physics to understand hillslope hydrology. Abstracts European Geophysical Union General Assembly, Vienna, 19-24 April 2009 .

Efficiency of soil N use by arable crops

C2 - Non-edited contributions to conferences

Macdonald, A. J., Knight, S. M., Glendining, M. J., Whitmore, A. P., Dailey, A. G., Goulding, K. W. T., Sinclair, A. H. and Rees, R. M. 2009. Efficiency of soil N use by arable crops. Abstracts 16th Nitrogen Workshop, Turin, 28 June-1 July 2009 . pp. 233-234

Potential for soil carbon sequestration, but with a full greenhouse gas budget

C1 - Edited contributions to conferences/learned societies

Goulding, K. W. T., Powlson, D. S. and Whitmore, A. P. 2009. Potential for soil carbon sequestration, but with a full greenhouse gas budget. Currie, L. D. and Lindsay, C. L. (ed.) Nutrient Management in a Rapidly Changing World: Proceedings 22nd Annual Workshop of the Fertilizer and Lime Research Centre Massey University, Palmerston North, 11-12 February 2009. . Fertilizer and Lime Research Centre, Massey University. pp. 7-15

The Bayesian maximum entropy method for lognormal variables

A - Papers appearing in refereed journals

Orton, T. G. and Lark, R. M. 2009. The Bayesian maximum entropy method for lognormal variables. Stochastic Environmental Research and Risk Assessment. 23, pp. 319-328. https://doi.org/10.1007/s00477-008-0217-7

The wavelet packet transform: a technique for investigating temporal variation of river water solutes

A - Papers appearing in refereed journals

Milne, A. E., Macleod, C. J. A., Haygarth, P. M., Hawkins, J. M. B. and Lark, R. M. 2009. The wavelet packet transform: a technique for investigating temporal variation of river water solutes. Journal of Hydrology. 379 (1-2), pp. 1-19. https://doi.org/10.1016/j.jhydrol.2009.09.038

Measurement and pore-level modelling of the production of nitrous oxide from soil

C2 - Non-edited contributions to conferences

Matthews, G. P., Laudone, G. M., Whalley, W. R., Bird, N. R. A., Gregory, A. S., Cardenas, L. M. and Misselbrook, T. H. 2009. Measurement and pore-level modelling of the production of nitrous oxide from soil. Abstracts 2nd International Conference on Biohydrology 2009: a Changing Climate for Biology and Soil Hydrology Interactions, Bratislava, 21-24 September 2009 .

Multilevel analysis of primary metabolism provides new insights into the role of potassium nutrition for glycolysis and nitrogen assimilation in Arabidopsis roots

A - Papers appearing in refereed journals

Armengaud, P., Sulpice, R., Miller, A. J., Stitt, M., Amtmann, A. and Gibon, Y. 2009. Multilevel analysis of primary metabolism provides new insights into the role of potassium nutrition for glycolysis and nitrogen assimilation in Arabidopsis roots. Plant Physiology. 150, pp. 772-785. https://doi.org/10.1104/pp.108.133629

Measurement of low matric potentials with porous matrix sensors and water-filled tensiometers

A - Papers appearing in refereed journals

Whalley, W. R., Lock, G., Jenkins, M., Peloe, T., Burek, K., Balendonck, J., Take, W. A., Tuzel, I. H. and Tuzel, Y. 2009. Measurement of low matric potentials with porous matrix sensors and water-filled tensiometers. Soil Science Society of America Journal. 73 (6), pp. 1796-1803. https://doi.org/10.2136/sssaj2008.0400

Statistics and spatial heterogeneity

C2 - Non-edited contributions to conferences

Lark, R. M. 2009. Statistics and spatial heterogeneity. Abstracts Micro Soil: Integrating Biological, Physical and Chemical Techniques for the Study of Soil Micro-Habitats, Dundee, 16-17 September 2009 . pp. 11-13

Microhabitat scale methods in microbial ecology

C2 - Non-edited contributions to conferences

Dennis, P., Miller, A. J., Kilburn, M., Taylor, R., Valsami-Jones, E., Grovenor, C. and Hirsch, P. R. 2009. Microhabitat scale methods in microbial ecology. Abstracts Micro Soil: Integrating Biological, Physical and Chemical Techniques for the Study of Soil Micro-Habitats, Dundee, 16-17 September 2009 . pp. 19

Sampling bacteria at the microhabitat scale

C2 - Non-edited contributions to conferences

Hirsch, P. R., Dennis, P. G. and Miller, A. J. 2009. Sampling bacteria at the microhabitat scale. Abstracts Micro Soil: Integrating Biological, Physical and Chemical Techniques for the Study of Soil Micro-Habitats, Dundee, 16-17 September 2009 . pp. 9

Kriging a soil variable with a simple nonstationary variance model

A - Papers appearing in refereed journals

Lark, R. M. 2009. Kriging a soil variable with a simple nonstationary variance model. Journal of Agricultural Biological and Environmental Statistics. 14, pp. 301-321. https://doi.org/10.1198/jabes.2009.07060

Modelling non-stationary variance of soil properties by tempering an empirical spectrum

A - Papers appearing in refereed journals

Haskard, K. A. and Lark, R. M. 2009. Modelling non-stationary variance of soil properties by tempering an empirical spectrum. Geoderma. 153, pp. 18-28. https://doi.org/10.1016/j.geoderma.2009.07.006

Electrophysiological characterization of pathways for K+ uptake into growing and non-growing leaf cells of barley

A - Papers appearing in refereed journals

Volkow, V., Boscari, A., Clement, M., Miller, A. J., Amtmann, A. and Fricke, W. 2009. Electrophysiological characterization of pathways for K+ uptake into growing and non-growing leaf cells of barley. Plant, Cell and Environment. 32 (12), pp. 1778-1790. https://doi.org/10.1111/j.1365-3040.2009.02034.x

Sampling and analytical plus subsampling variance components for five soil indicators observed at regional scale

A - Papers appearing in refereed journals

Rawlins, B. G., Scheib, A. J., Lark, R. M. and Lister, T. R. 2009. Sampling and analytical plus subsampling variance components for five soil indicators observed at regional scale. European Journal of Soil Science. 60 (5), pp. 740-747. https://doi.org/10.1111/j.1365-2389.2009.01159.x

Estimating the regional mean status and change of soil properties: two distinct objectives for soil survey

A - Papers appearing in refereed journals

Lark, R. M. 2009. Estimating the regional mean status and change of soil properties: two distinct objectives for soil survey. European Journal of Soil Science. 60 (5), pp. 748-756. https://doi.org/10.1111/j.1365-2389.2009.01156.x

Potassium channels in barley: cloning, functional characterization and expression analyses in relation to leaf growth and development

A - Papers appearing in refereed journals

Boscari, A., Clement, M., Volkov, V., Golldack, D., Hybiak, J., Miller, A. J., Amtmann, A. and Fricke, W. 2009. Potassium channels in barley: cloning, functional characterization and expression analyses in relation to leaf growth and development. Plant, Cell and Environment. 32 (12), pp. 1761-1777. https://doi.org/10.1111/j.1365-3040.2009.02033.x

Physical effects of soil drying on roots and crop growth

A - Papers appearing in refereed journals

Whitmore, A. P. and Whalley, W. R. 2009. Physical effects of soil drying on roots and crop growth. Journal of Experimental Botany. 60, pp. 2845-2857. https://doi.org/10.1093/jxb/erp200

Using measurements close to a detection limit in a geostatistical case study to predict selenium concentration in topsoil

A - Papers appearing in refereed journals

Orton, T. G., Rawlins, B. G. and Lark, R. M. 2009. Using measurements close to a detection limit in a geostatistical case study to predict selenium concentration in topsoil. Geoderma. 152, pp. 269-282. https://doi.org/10.1016/j.geoderma.2009.06.014

The effect of long-term soil management on the physical and biological resilience of a range of arable and grassland soils in England

A - Papers appearing in refereed journals

Gregory, A. S., Watts, C. W., Griffiths, B. S., Hallett, P. D., Kuan, H. L. and Whitmore, A. P. 2009. The effect of long-term soil management on the physical and biological resilience of a range of arable and grassland soils in England. Geoderma. 153, pp. 172-185. https://doi.org/10.1016/j.geoderma.2009.08.002

Wavelet transforms applied to irregularly sampled soil data

A - Papers appearing in refereed journals

Milne, A. E. and Lark, R. M. 2009. Wavelet transforms applied to irregularly sampled soil data. Mathematical geosciences. 41, pp. 661-678. https://doi.org/10.1007/s11004-009-9234-4

Spatial monitoring of a non-stationary soil property: phosphorus in a Florida water conservation area

A - Papers appearing in refereed journals

Marchant, B. P., Newman, S., Corstanje, R., Reddy, K. R., Osborne, T. Z. and Lark, R. M. 2009. Spatial monitoring of a non-stationary soil property: phosphorus in a Florida water conservation area. European Journal of Soil Science. 60 (5), pp. 757-769. https://doi.org/10.1111/j.1365-2389.2009.01158.x

A stochastic-geometric model of soil variation

A - Papers appearing in refereed journals

Lark, R. M. 2009. A stochastic-geometric model of soil variation. European Journal of Soil Science. 60 (4), pp. 706-719. https://doi.org/10.1111/j.1365-2389.2009.01152.x

Quantifying terrestrial carbon stocks: examining the spatial variation in two upland areas in the UK and a comparison to mapped estimates of soil carbon

A - Papers appearing in refereed journals

Frogbrook, Z. L., Bell, J., Bradley, R. I., Evans, C., Lark, R. M., Reynolds, B., Smith, P. and Towers, W. 2009. Quantifying terrestrial carbon stocks: examining the spatial variation in two upland areas in the UK and a comparison to mapped estimates of soil carbon. Soil Use and Management. 25 (3), pp. 320-332. https://doi.org/10.1111/j.1475-2743.2009.00232.x

Freeways in the plant: transporters for N, P and S and their regulation

A - Papers appearing in refereed journals

Miller, A. J., Shen, Q. and Xu, G. 2009. Freeways in the plant: transporters for N, P and S and their regulation. Current Opinion in Plant Biology. 12, pp. 284-290. https://doi.org/10.1016/j.pbi.2009.04.010

Investigating the effects of organic and conventional management on soil aggregate stability using X-ray computed tomography

A - Papers appearing in refereed journals

Papadopoulos, A., Bird, N. R. A., Whitmore, A. P. and Mooney, S. J. 2009. Investigating the effects of organic and conventional management on soil aggregate stability using X-ray computed tomography. European Journal of Soil Science. 60 (3), pp. 360-368. https://doi.org/10.1111/j.1365-2389.2009.01126.x

Airborne radiometric survey data and a DTM as covariates for regional scale mapping of soil organic carbon across Northern Ireland

A - Papers appearing in refereed journals

Rawlins, B. G., Marchant, B. P., Smyth, D., Scheib, C., Lark, R. M. and Jordan, C. 2009. Airborne radiometric survey data and a DTM as covariates for regional scale mapping of soil organic carbon across Northern Ireland. European Journal of Soil Science. 60 (1), pp. 44-54. https://doi.org/10.1111/j.1365-2389.2008.01092.x

Combining spatial resolutions in the multiscale analysis of soil pore-size distributions

A - Papers appearing in refereed journals

Papadopoulos, A., Whitmore, A. P., White, R. P., Mooney, S. J. and Bird, N. R. A. 2009. Combining spatial resolutions in the multiscale analysis of soil pore-size distributions. Vadose Zone Journal. 8, pp. 227-232. https://doi.org/10.2136/vzj2008.0042

Modeling dynamic fragmentation of soil

A - Papers appearing in refereed journals

Bird, N. R. A., Watts, C. W., Tarquis, A. M. and Whitmore, A. P. 2009. Modeling dynamic fragmentation of soil. Vadose Zone Journal. 8 (1), pp. 197-201. https://doi.org/10.2136/vzj2008.0046

Is it possible to increase the sustainability of arable and ruminant agriculture by reducing inputs?

A - Papers appearing in refereed journals

Glendining, M. J., Dailey, A. G., Williams, A. G., Van Evert, F. K., Goulding, K. W. T. and Whitmore, A. P. 2009. Is it possible to increase the sustainability of arable and ruminant agriculture by reducing inputs? Agricultural Systems. 99 (2-3), pp. 117-125. https://doi.org/10.1016/j.agsy.2008.11.001

Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation

A - Papers appearing in refereed journals

Ai, P., Sun, S., Zhao, J., Fan, X., Xin, W., Guo, Q., Yu, L., Shen, Q., Wu, P., Miller, A. J. and Xu, G. 2009. Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation. The Plant Journal. 57, pp. 798-809. https://doi.org/10.1111/j.1365-313X.2008.03726.x

Linking rhizoplane pH and bacterial density at the microhabitat scale

A - Papers appearing in refereed journals

Dennis, P. G., Hirsch, P. R., Smith, S. J., Taylor, R. G., Valsami-Jones, E. and Miller, A. J. 2009. Linking rhizoplane pH and bacterial density at the microhabitat scale. Journal of Microbiological Methods. 76, pp. 101-104. https://doi.org/10.1016/j.mimet.2008.09.013

Compositional data analysis in the geosciences: From theory to practice

A - Papers appearing in refereed journals

Lark, R. M. 2008. Compositional data analysis in the geosciences: From theory to practice. Journal of the Royal Statistical Society, Series A (Statistics in Society). 171, pp. 313-314.

Factors affecting the recovery of available soil nitrogen by cereal and oilseed rape crops

C2 - Non-edited contributions to conferences

Knight, S. M., Macdonald, A. J., Glendining, M. J., Whitmore, A. P., Dailey, A. G., Goulding, K. W. T., Sinclair, A. H. and Rees, R. M. 2008. Factors affecting the recovery of available soil nitrogen by cereal and oilseed rape crops. Abstracts AAB Conference on Resource Capture by Crops: Integrated Resources, Nottingham, 10-12 September 2008 .

Discussion of: Schroder, J. J., Neeteson, J. J., 2008. Nutrient management regulations in The Netherlands (with Discussion)

A - Papers appearing in refereed journals

Goulding, K. W. T. and Whitmore, A. P. 2008. Discussion of: Schroder, J. J., Neeteson, J. J., 2008. Nutrient management regulations in The Netherlands (with Discussion). Geoderma. 144, pp. 426-428. https://doi.org/10.1016/j.geoderma.2007.12.010

Better estimation of soil nitrogen use efficiency by cereals and oilseed rape (HGCA Research Review No. 68)

D1 - Technical reports: non-confidential

Knight, S., Macdonald, A. J., Glendining, M. J., Whitmore, A. P., Dailey, A. G., Goulding, K. W. T., Sinclair, A. and Rees, B. 2008. Better estimation of soil nitrogen use efficiency by cereals and oilseed rape (HGCA Research Review No. 68). Home Grown Cereals Authority (HGCA) London.

A putative role for the plasma membrane potential in the control of the expression of the gene encoding the tomato high-affinity potassium transporter HAK5

A - Papers appearing in refereed journals

Nieves-Cordones, M., Miller, A. J., Aleman, F., Martinez, V. and Rubio, F. 2008. A putative role for the plasma membrane potential in the control of the expression of the gene encoding the tomato high-affinity potassium transporter HAK5. Plant Molecular Biology. 68, pp. 521-532. https://doi.org/10.1007/s11103-008-9388-3

Spatial variation of ammonia volatilization from soil and its scale-dependent correlation with soil properties

A - Papers appearing in refereed journals

Corstanje, R., Kirk, G. J. D., Pawlett, M., Read, R. and Lark, R. M. 2008. Spatial variation of ammonia volatilization from soil and its scale-dependent correlation with soil properties. European Journal of Soil Science. 59 (6), pp. 1260-1270. https://doi.org/10.1111/j.1365-2389.2008.01087.x

The behaviour of soil process models of ammonia volatilization at contrasting spatial scales

A - Papers appearing in refereed journals

Corstanje, R., Kirk, G. J. D. and Lark, R. M. 2008. The behaviour of soil process models of ammonia volatilization at contrasting spatial scales. European Journal of Soil Science. 59 (6), pp. 1271-1283. https://doi.org/10.1111/j.1365-2389.2008.01086.x

Evidence from near-isogenic lines that root penetration increases with root diameter and bending stiffness in rice

A - Papers appearing in refereed journals

Clark, L. J., Price, A. H., Steele, K. A. and Whalley, W. R. 2008. Evidence from near-isogenic lines that root penetration increases with root diameter and bending stiffness in rice. Functional Plant Biology. 35, pp. 1163-1171. https://doi.org/10.1071/FP08132

Reply to "Standardized vs. customary ordinary cokriging..." by A. Papritz

A - Papers appearing in refereed journals

Bishop, T. F. A. and Lark, R. M. 2008. Reply to "Standardized vs. customary ordinary cokriging..." by A. Papritz. Geoderma. 146, pp. 397-399. https://doi.org/10.1016/j.geoderma.2008.04.008

A comparison of parametric and non-parametric methods for modelling a coregionalization

A - Papers appearing in refereed journals

Bishop, T. F. A. and Lark, R. M. 2008. A comparison of parametric and non-parametric methods for modelling a coregionalization. Geoderma. 148, pp. 13-24. https://doi.org/10.1016/j.geoderma.2008.08.010

A bioinformatic and transcriptomic approach to identifying positional candidate genes without fine mapping: an example using rice root-growth QTLs

A - Papers appearing in refereed journals

Norton, G. J., Aitkenhead, M. J., Khowaja, F. S., Whalley, W. R. and Price, A. H. 2008. A bioinformatic and transcriptomic approach to identifying positional candidate genes without fine mapping: an example using rice root-growth QTLs. Genomics. 92 (5), pp. 344-352. https://doi.org/10.1016/j.ygeno.2008.07.002

Can we predict the provenance of a soil sample for forensic purposes by reference to a spatial database?

A - Papers appearing in refereed journals

Lark, R. M. and Rawlins, B. G. 2008. Can we predict the provenance of a soil sample for forensic purposes by reference to a spatial database? European Journal of Soil Science. 59 (5), pp. 1000-1006. https://doi.org/10.1111/j.1365-2389.2008.01064.x

Cloning and expression analyses of potassium channels in barley leaves

C2 - Non-edited contributions to conferences

Fricke, W., Volkov, V., Boscari, A., Clement, M., Amtmann, A., Golldack, D. and Miller, A. J. 2008. Cloning and expression analyses of potassium channels in barley leaves. https://doi.org/10.1016/j.cbpa.2008.04.524

On effective linearity of soil process models

A - Papers appearing in refereed journals

Corstanje, R. and Lark, R. M. 2008. On effective linearity of soil process models. European Journal of Soil Science. 59 (5), pp. 990-999. https://doi.org/10.1111/j.1365-2389.2008.01046.x

A novel family of plastid transporters involved in glutathione metabolism

C2 - Non-edited contributions to conferences

Cobbett, C., Maughan, S., Kiddle, G., Cairns, N., Jarvis, R., Nieuwland, J., Pasternak, M., Lim, B., Miller, A. J., Murray, J., Foyer, C. H. and Meyer, A. 2008. A novel family of plastid transporters involved in glutathione metabolism. Abstracts International Symposium on Glutathione and Related Thiols in Microorganisms and Plants, Nancy, 26-29 August 2008 .

Wetting of agricultural soil measured by a simplified capillary rise technique

A - Papers appearing in refereed journals

Matthews, G. P., Watts, C. W., Powlson, D. S., Price, J. C. and Whalley, W. R. 2008. Wetting of agricultural soil measured by a simplified capillary rise technique. European Journal of Soil Science. 59 (4), pp. 817-823. https://doi.org/10.1111/j.1365-2389.2008.01039.x

A novel method for sampling bacteria on plant root and soil surfaces at the microhabitat scale

A - Papers appearing in refereed journals

Dennis, P. G., Miller, A. J., Clark, I. M., Taylor, R. G., Valsami-Jones, E. and Hirsch, P. R. 2008. A novel method for sampling bacteria on plant root and soil surfaces at the microhabitat scale. Journal of Microbiological Methods. 75, pp. 12-18. https://doi.org/10.1016/j.mimet.2008.04.013

Analysis of two variants of a spatially distributed crop model, using wavelet transforms and geostatistics

A - Papers appearing in refereed journals

Pringle, M. J., Marchant, B. P. and Lark, R. M. 2008. Analysis of two variants of a spatially distributed crop model, using wavelet transforms and geostatistics. Agricultural Systems. 98, pp. 135-146. https://doi.org/10.1016/j.agsy.2008.06.002

Digital soil mapping technologies for countries with sparse data infrastructures

B - Book chapters etc edited externally

Minasny, B. and Lark, R. M. 2008. Digital soil mapping technologies for countries with sparse data infrastructures. in: McBratney, A. B., Mendonca-Santos, M. deL. and Hartemink, A. E. (ed.) Digital soil mapping with limited data Springer, Heidelberg. pp. 15-30

Some results on the spatial breakdown point of robust point estimates of the variogram

A - Papers appearing in refereed journals

Lark, R. M. 2008. Some results on the spatial breakdown point of robust point estimates of the variogram. Mathematical geosciences. 40, pp. 729-751. https://doi.org/10.1007/s11004-008-9162-8

Two rice nitrate transporters encoded by one gene that each show differential regulation by pH

C2 - Non-edited contributions to conferences

Fan, X., Yan, M., Li, B., Xu, G., Shen, Q. and Miller, A. J. 2008. Two rice nitrate transporters encoded by one gene that each show differential regulation by pH. Abstracts SEB Plant Transport Group Meeting, Manchester, 4-5 September 2008 .

Mapping aerial metal deposition in metropolitan areas from tree bark: a case study in Sheffield, England

A - Papers appearing in refereed journals

Schelle, E., Rawlins, B. G., Lark, R. M., Webster, R., Staton, I. and Mcleod, C. W. 2008. Mapping aerial metal deposition in metropolitan areas from tree bark: a case study in Sheffield, England. Environmental Pollution. 155, pp. 164-173. https://doi.org/10.1016/j.envpol.2007.10.036

The effects of simple perturbations of a process model on the spatial variability of its output

A - Papers appearing in refereed journals

Pringle, M. J. and Lark, R. M. 2008. The effects of simple perturbations of a process model on the spatial variability of its output. Geoderma. 145, pp. 267-277. https://doi.org/10.1016/j.geoderma.2008.03.014

Multiscale entropy-based analysis of soil transect data

A - Papers appearing in refereed journals

Tarquis, A. M., Bird, N. R. A., Whitmore, A. P., Cartagena, M. C. and Pachepsky, Y. 2008. Multiscale entropy-based analysis of soil transect data. Vadose Zone Journal. 7, pp. 563-569. https://doi.org/10.2136/vzj2007.0039

Fractal analysis of pore roughness in images of soil using the slit island method

A - Papers appearing in refereed journals

Papadopoulos, A., Bird, N. R. A., Mooney, S. J. and Whitmore, A. P. 2008. Fractal analysis of pore roughness in images of soil using the slit island method. Vadose Zone Journal. 7, pp. 456-460. https://doi.org/10.2136/vzj2007.0017

A gradual rather than abrupt increase in soil strength gives better root penetration of strong layers

A - Papers appearing in refereed journals

Clark, L. J., Ferraris, S., Price, A. H. and Whalley, W. R. 2008. A gradual rather than abrupt increase in soil strength gives better root penetration of strong layers. Plant and Soil. 307, pp. 235-242. https://doi.org/10.1007/s11104-008-9602-8

Investigating glutamate receptor-like gene co-expression in Arabidopsis thaliana

A - Papers appearing in refereed journals

Roy, S. J., Gilliham, M., Berger, B., Essah, P. A., Cheffings, C., Miller, A. J., Davenport, R. J., Liu, L-H., Skynner, M. J., Davies, J. M., Richardson, P., Leigh, R. A. and Tester, M. 2008. Investigating glutamate receptor-like gene co-expression in Arabidopsis thaliana. Plant, Cell and Environment. 31 (6), pp. 861-871. https://doi.org/10.1111/j.1365-3040.2008.01801.x

Science on the Normandy beaches: J. D. Bernal and the prediction of soil trafficability for Operation Overlord

G - Articles in popular magazines and other technical publications

Lark, R. M. 2008. Science on the Normandy beaches: J. D. Bernal and the prediction of soil trafficability for Operation Overlord. Soil Survey Horizons. 49, pp. 12-15.

Functional resilience of soil microbial communities depends on both soil structure and microbial community composition

A - Papers appearing in refereed journals

Griffiths, B. S., Hallett, P. D., Kuan, H. L., Gregory, A. S., Watts, C. W. and Whitmore, A. P. 2008. Functional resilience of soil microbial communities depends on both soil structure and microbial community composition. Biology And Fertility Of Soils. 44, pp. 745-754. https://doi.org/10.1007/s00374-007-0257-z

The effect of soil strength on yield of wheat

A - Papers appearing in refereed journals

Whalley, W. R., Watts, C. W., Gregory, A. S., Mooney, S. J., Clark, L. J. and Whitmore, A. P. 2008. The effect of soil strength on yield of wheat. Plant and Soil. 306, pp. 237-247. https://doi.org/10.1007/s11104-008-9577-5

Farm Level Optimal Water Management: Assistant for Irrigation under Deficit (FLOW-AID)

G - Articles in popular magazines and other technical publications

Whalley, W. R. 2008. Farm Level Optimal Water Management: Assistant for Irrigation under Deficit (FLOW-AID). RRA Newsletter. 26, p. 2.

Book review: Plant solute transport. Yeo, A.R., Flowers, T.J. eds. 2007. Oxford: Wiley-Blackwell

G - Articles in popular magazines and other technical publications

Miller, A. J. 2008. Book review: Plant solute transport. Yeo, A.R., Flowers, T.J. eds. 2007. Oxford: Wiley-Blackwell. Annals of Botany. 101 (7), pp. 1050-1051. https://doi.org/10.1093/aob/mcn035

Spatial analysis of the error in a model of soil nitrogen

A - Papers appearing in refereed journals

Pringle, M. J., Baxter, S. J., Marchant, B. P. and Lark, R. M. 2008. Spatial analysis of the error in a model of soil nitrogen. Ecological Modelling. 211, pp. 453-467. https://doi.org/10.1016/j.ecolmodel.2007.09.021

Cytosolic nitrate ion homeostasis: could it have a role in sensing nitrogen status?

A - Papers appearing in refereed journals

Miller, A. J. and Smith, S. J. 2008. Cytosolic nitrate ion homeostasis: could it have a role in sensing nitrogen status? Annals of Botany. 101, pp. 485-489. https://doi.org/10.1093/aob/mcm313

Amino acids and nitrate as signals for the regulation of nitrogen acquisition

A - Papers appearing in refereed journals

Miller, A. J., Fan, X., Shen, Q. and Smith, S. J. 2008. Amino acids and nitrate as signals for the regulation of nitrogen acquisition. Journal of Experimental Botany. 59, pp. 111-119. https://doi.org/10.1093/jxb/erm208

Inferences from fluctuations in the local variogram about the assumption of stationarity in the variance

A - Papers appearing in refereed journals

Corstanje, R., Grunwald, S. and Lark, R. M. 2008. Inferences from fluctuations in the local variogram about the assumption of stationarity in the variance. Geoderma. 143, pp. 123-132. https://doi.org/10.1016/j.geoderma.2007.10.021

Carbon sequestration in European soils through straw incorporation: limitations and alternatives

A - Papers appearing in refereed journals

Powlson, D. S., Riche, A. B., Coleman, K., Glendining, M. J. and Whitmore, A. P. 2008. Carbon sequestration in European soils through straw incorporation: limitations and alternatives. Waste Management. 28, pp. 741-746. https://doi.org/10.1016/j.wasman.2007.09.024

Optimizing nutrient management for farm systems

A - Papers appearing in refereed journals

Goulding, K. W. T., Jarvis, S. and Whitmore, A. P. 2008. Optimizing nutrient management for farm systems. Philosophical Transactions of the Royal Society B-Biological Sciences. 363, pp. 667-680. https://doi.org/10.1098/rstb.2007.2177

HvPIP1;6, a barley (Hordeum vulgare L.) plasma membrane water channel particularly expressed in growing compared with non-growing leaf tissues

A - Papers appearing in refereed journals

Wei, W., Alexandersson, E., Golldack, D., Miller, A. J., Kjellbom, P. O. and Fricke, W. 2007. HvPIP1;6, a barley (Hordeum vulgare L.) plasma membrane water channel particularly expressed in growing compared with non-growing leaf tissues. Plant and cell physiology. 48 (8), pp. 1132-1147. https://doi.org/10.1093/pcp/pcm083

Nitrate signalling and the two component high affinity uptake system in Arabidopsis (Addendum to: Characterisation of a two component high affinity nitrate uptake system in Arabidopsis: physiology and protein-protein interaction. Plant Physiology 2006; 142:1304-17)

A - Papers appearing in refereed journals

Orsel, M., Chopin, F., Leleu, O., Smith, S. J., Krapp, A., Daniel-Vedele, F. and Miller, A. J. 2007. Nitrate signalling and the two component high affinity uptake system in Arabidopsis (Addendum to: Characterisation of a two component high affinity nitrate uptake system in Arabidopsis: physiology and protein-protein interaction. Plant Physiology 2006; 142:1304-17). Plant Signaling and Behavior. 2, pp. 260-262.

Estimation of linear models of coregionalization by residual maximum likelihood

A - Papers appearing in refereed journals

Marchant, B. P. and Lark, R. M. 2007. Estimation of linear models of coregionalization by residual maximum likelihood. European Journal of Soil Science. 58 (6), pp. 1506-1513. https://doi.org/10.1111/j.1365-2389.2007.00957.x

Physical resilience of soil to field compaction and the interactions with plant growth and microbial community structure

A - Papers appearing in refereed journals

Gregory, A. S., Watts, C. W., Whalley, W. R., Kuan, H. L., Griffiths, B. S., Hallett, P. D. and Whitmore, A. P. 2007. Physical resilience of soil to field compaction and the interactions with plant growth and microbial community structure. European Journal of Soil Science. 58 (6), pp. 1221-1232. https://doi.org/10.1111/j.1365-2389.2007.00956.x

Scale- and location-dependent correlations of soil strength and the yield of wheat

A - Papers appearing in refereed journals

Pringle, M. J. and Lark, R. M. 2007. Scale- and location-dependent correlations of soil strength and the yield of wheat. Soil & Tillage Research. 95, pp. 47-60. https://doi.org/10.1016/j.still.2006.10.010

Accounting for the uncertainty in the local mean in spatial prediction by Bayesian Maximum Entropy

A - Papers appearing in refereed journals

Orton, T. G. and Lark, R. M. 2007. Accounting for the uncertainty in the local mean in spatial prediction by Bayesian Maximum Entropy. Stochastic Environmental Research and Risk Assessment. 21, pp. 773-784. https://doi.org/10.1007/s00477-006-0089-7

A landscape-scale experiment on the changes in available potassium over a winter wheat cropping season

A - Papers appearing in refereed journals

Bishop, T. F. A. and Lark, R. M. 2007. A landscape-scale experiment on the changes in available potassium over a winter wheat cropping season. Geoderma. 141, pp. 384-396. https://doi.org/10.1016/j.geoderma.2007.07.004

Understanding airborne radiometric survey signals across part of eastern England

A - Papers appearing in refereed journals

Rawlins, B. G., Lark, R. M. and Webster, R. 2007. Understanding airborne radiometric survey signals across part of eastern England. Earth Surface Processes And Landforms. 32, pp. 1503-1515. https://doi.org/10.1002/esp.1468

Scale-dependent relationships between soil organic carbon and urease activity

A - Papers appearing in refereed journals

Corstanje, R., Schulin, R. and Lark, R. M. 2007. Scale-dependent relationships between soil organic carbon and urease activity. European Journal of Soil Science. 58 (5), pp. 1087-1095. https://doi.org/10.1111/j.1365-2389.2007.00902.x

Nitrate transport and signalling

A - Papers appearing in refereed journals

Miller, A. J., Fan, X., Orsel, M., Smith, S. J. and Wells, D. M. 2007. Nitrate transport and signalling. Journal of Experimental Botany. 58, pp. 2297-2306. https://doi.org/10.1093/jxb/erm066

Intercropping reduces nitrate leaching from under field crops without loss of yield: a modelling study

A - Papers appearing in refereed journals

Whitmore, A. P. and Schroder, J. J. 2007. Intercropping reduces nitrate leaching from under field crops without loss of yield: a modelling study. European Journal of Agronomy. 27, pp. 81-88. https://doi.org/10.1016/j.eja.2007.02.004

The Matern variogram model: implications for uncertainty propagation and sampling in geostatistical surveys

A - Papers appearing in refereed journals

Marchant, B. P. and Lark, R. M. 2007. The Matern variogram model: implications for uncertainty propagation and sampling in geostatistical surveys. Geoderma. 140, pp. 337-345. https://doi.org/10.1016/j.geoderma.2007.04.016

The Arabidopsis ATNRT2.7 nitrate transporter controls nitrate content in seeds

A - Papers appearing in refereed journals

Chopin, F., Orsel, M., Dorbe, M-F., Chardon, F., Truong, H-N., Miller, A. J., Krapp, A. and Daniel-Vedele, F. 2007. The Arabidopsis ATNRT2.7 nitrate transporter controls nitrate content in seeds. The Plant Cell. 19, pp. 1590-1602. https://doi.org/10.1105/tpc.107.050542

Robust estimation of the variogram by residual maximum likelihood

A - Papers appearing in refereed journals

Marchant, B. P. and Lark, R. M. 2007. Robust estimation of the variogram by residual maximum likelihood. Geoderma. 140, pp. 62-72. https://doi.org/10.1016/j.geoderma.2007.03.005

Comparing nitrate storage and remobilization in two rice cultivars that differ in their nitrogen use efficiency

A - Papers appearing in refereed journals

Fan, X., Jia, L., Li, Y., Smith, S. J., Miller, A. J. and Shen, Q. 2007. Comparing nitrate storage and remobilization in two rice cultivars that differ in their nitrogen use efficiency. Journal of Experimental Botany. 58, pp. 1729-1740. https://doi.org/10.1093/jxb/erm033

A realistic appraisal of plant signals involved in nematode attraction to roots

C2 - Non-edited contributions to conferences

Perry, R. N. and Miller, A. J. 2007. A realistic appraisal of plant signals involved in nematode attraction to roots. Abstracts 18th Symposium of the Nematological Society of Southern Africa, Port Elizabeth, 6-10 May 2007 . pp. 44

An investigation of the multi-scale temporal variability of beach profiles at Duck using wavelet packet transforms

A - Papers appearing in refereed journals

Reeve, D., Li, Y., Lark, R. M. and Simmonds, D. 2007. An investigation of the multi-scale temporal variability of beach profiles at Duck using wavelet packet transforms. Coastal Engineering. 54, pp. 401-415. https://doi.org/10.1016/j.coastaleng.2006.11.008

Cokriging particle size fractions of the soil

A - Papers appearing in refereed journals

Lark, R. M. and Bishop, T. F. A. 2007. Cokriging particle size fractions of the soil. European Journal of Soil Science. 58 (3), pp. 763-774. https://doi.org/10.1111/j.1365-2389.2006.00866.x

Inference about soil variability from the structure of the best wavelet packer basis

A - Papers appearing in refereed journals

Lark, R. M. 2007. Inference about soil variability from the structure of the best wavelet packer basis. European Journal of Soil Science. 58 (3), pp. 822-831. https://doi.org/10.1111/j.1365-2389.2006.00872.x

Optimized sample schemes for geostatistical surveys

A - Papers appearing in refereed journals

Marchant, B. P. and Lark, R. M. 2007. Optimized sample schemes for geostatistical surveys. Mathematical geology. 39, pp. 113-134. https://doi.org/10.1007/s11004-006-9069-1

The biological and physical stability and resilience of a selection of Scottish soils to stresses

A - Papers appearing in refereed journals

Kuan, H. L., Hallett, P. D., Griffiths, B. S., Gregory, A. S., Watts, C. W. and Whitmore, A. P. 2007. The biological and physical stability and resilience of a selection of Scottish soils to stresses. European Journal of Soil Science. 58 (3), pp. 811-821. https://doi.org/10.1111/j.1365-2389.2006.00871.x

Using expert knowledge with control of false discovery rate to select regressors for prediction of soil properties

A - Papers appearing in refereed journals

Lark, R. M., Bishop, T. F. A. and Webster, R. 2007. Using expert knowledge with control of false discovery rate to select regressors for prediction of soil properties. Geoderma. 138 (1-2), pp. 65-78. https://doi.org/10.1016/j.geoderma.2006.10.015

Determination of the mineralization of nitrogen from composted chicken manure as affected by temperature

A - Papers appearing in refereed journals

Whitmore, A. P. 2007. Determination of the mineralization of nitrogen from composted chicken manure as affected by temperature. Nutrient Cycling in Agroecosystems. 77, pp. 225-232. https://doi.org/10.1007/s10705-006-9059-1

Describing the transformation of organic carbon and nitrogen in soil using the MOTOR system

A - Papers appearing in refereed journals

Whitmore, A. P. 2007. Describing the transformation of organic carbon and nitrogen in soil using the MOTOR system. Computers and Electronics in Agriculture. 55, pp. 71-88. https://doi.org/10.1016/j.compag.2006.11.005

A porous-matrix sensor to measure the matric potential of soil water in the field

A - Papers appearing in refereed journals

Whalley, W. R., Clark, L. J., Take, W. A., Bird, N. R. A., Leech, P. K., Cope, R. E. and Watts, C. W. 2007. A porous-matrix sensor to measure the matric potential of soil water in the field. European Journal of Soil Science. 58 (1), pp. 18-25. https://doi.org/10.1111/j.1365-2389.00790.x

Prediction of the penetrometer resistance of soils with models with few parameters

A - Papers appearing in refereed journals

Whalley, W. R., To, J., Kay, B. D. and Whitmore, A. P. 2007. Prediction of the penetrometer resistance of soils with models with few parameters. Geoderma. 137, pp. 370-377. https://doi.org/10.1016/j.geoderma.2006.08.029

Estimating the local mean for Bayesian maximum entropy by generalized least squares and maximum likelihood, and an application to the spatial analysis of a censored soil variable

A - Papers appearing in refereed journals

Orton, T. G. and Lark, R. M. 2007. Estimating the local mean for Bayesian maximum entropy by generalized least squares and maximum likelihood, and an application to the spatial analysis of a censored soil variable. European Journal of Soil Science. 58 (1), pp. 60-73. https://doi.org/10.1111/j.1365-2389.2006.00800.x

Effects of soil compaction and irrigation on the concentrations of selenium and arsenic in wheat grains

A - Papers appearing in refereed journals

Zhao, F-J., Lopez-Bellido, F. J., Gray, C. W., Whalley, W. R., Clark, L. J. and McGrath, S. P. 2007. Effects of soil compaction and irrigation on the concentrations of selenium and arsenic in wheat grains. Science of the Total Environment. 372, pp. 433-439. https://doi.org/10.1016/j.scitotenv.2006.09.028

Spatial evaluation of pedotransfer functions using wavelet analysis

A - Papers appearing in refereed journals

Pringle, M. J., Romano, N., Minasny, B., Chirico, G. B. and Lark, R. M. 2007. Spatial evaluation of pedotransfer functions using wavelet analysis. Journal of Hydrology. 333, pp. 182-198. https://doi.org/10.1016/j.jhydrol.2006.08.007

Spatial covariation of Azotobacter abundance and soil properties: a case study using the wavelet transform

A - Papers appearing in refereed journals

Barnes, R. J., Baxter, S. J. and Lark, R. M. 2007. Spatial covariation of Azotobacter abundance and soil properties: a case study using the wavelet transform. Soil Biology and Biochemistry. 39, pp. 295-310. https://doi.org/10.1016/j.soilbio.2006.08.001

Genetically modified hydrographs: what can grass genetics do for temperate catchment hydrology?

C2 - Non-edited contributions to conferences

Macleod, C. J. A., Binley, A., Clark, L. J., Hawkins, S. L., Humphreys, M. W., King, I. P., Scholefield, D., Turner, L. B., Whalley, W. R. and Haygarth, P. M. 2007. Genetically modified hydrographs: what can grass genetics do for temperate catchment hydrology? European Geosciences Union, General Assembly 2007, Vienna, Austria, 16-20 April 2007.

Genetically modified hydrographs: what can grass genetics do for temperate catchment hydrology?

A - Papers appearing in refereed journals

Macleod, C. J. A., Binley, A., Clark, L. J., Hawkins, S. L., Humphreys, M. W., Turner, L. B., Whalley, W. R. and Haygarth, P. M. 2007. Genetically modified hydrographs: what can grass genetics do for temperate catchment hydrology? Hydrological Processes. 21 (16), pp. 2217-2221. https://doi.org/10.1002/hyp.6780

Grass roots to improve the management of soil-water

C1 - Edited contributions to conferences/learned societies

Humphreys, M. W., Binley, A., Clark, L. J., Hawkins, S. L., King, I. P., Macleod, C. J. A., Turner, L. B., Whalley, W. R. and Haygarth, P. M. 2007. Grass roots to improve the management of soil-water. Hopkins, J. J., Duncan, A. J., McCracken, D. I., Peel, S. and Tallowin, J. R. B. (ed.) 'High Value Grassland: providing biodiversity, a clean environment and premium products': Proceedings BGS/BES/BSAS Conference, Keele University, Staffs, 17-19 April 2007. British Grassland Society Occasional Symposium, 38. pp. 249-252

An Arabidopsis low affinity nitrate transporter with a novel transport mechanism

C2 - Non-edited contributions to conferences

Orsel, M. and Miller, A. J. 2006. An Arabidopsis low affinity nitrate transporter with a novel transport mechanism. Abstracts SEB Plant Transport Group Meeting, Ashford, 4-6 September 2006 . pp. 15

Expression and functional analysis of rice NRT2 nitrate transporters

C2 - Non-edited contributions to conferences

Fan, X., Shen, Q., Smith, S. and Miller, A. J. 2006. Expression and functional analysis of rice NRT2 nitrate transporters. Abstracts SEB Plant Transport Group Meeting, Ashford, 4-6 September 2006 . pp. 31

Non-destructive micro-scale sampling of bacteria from a root surface using a tungsten rod with a standardised sampling area controlled by a micromanipulator

D1 - Technical reports: non-confidential

Dennis, P. G., Miller, A. J. and Hirsch, P. R. 2006. Non-destructive micro-scale sampling of bacteria from a root surface using a tungsten rod with a standardised sampling area controlled by a micromanipulator. Swiss Federal Research Institute, Birmensdorf.

Characterization of a two-component high-affinity nitrate uptake system in Arabidopsis. Physiology and protein-protein interaction

A - Papers appearing in refereed journals

Orsel, M., Chopin, F., Leleu, O., Smith, S. J., Krapp, A., Daniel-Vedele, F. and Miller, A. J. 2006. Characterization of a two-component high-affinity nitrate uptake system in Arabidopsis. Physiology and protein-protein interaction. Plant Physiology. 142, pp. 1304-1317. https://doi.org/10.1104/pp.106.085209

Biological and chemical characterisation of microsites in the rhizosphere

C2 - Non-edited contributions to conferences

Dennis, P. G., Miller, A. J. and Hirsch, P. R. 2006. Biological and chemical characterisation of microsites in the rhizosphere. Abstracts Final Meeting of COST Action 631. From Understanding and Modelling to Application: Managing the Natural Potentials of the Rhizosphere for Designing Rhizosphere Technologies, Prague, 20-23 April 2006 . pp. 7

Novel method to investigate spatiotemporal trends in rhizosphere bacterial communities

C2 - Non-edited contributions to conferences

Dennis, P. G., Miller, A. J. and Hirsch, P. R. 2006. Novel method to investigate spatiotemporal trends in rhizosphere bacterial communities. Abstracts 158th Meeting of the Society for General Microbiology, Warwick, 3-6 April 2006 . pp. 52

A new method to estimate boundary models for biological datasets

C2 - Non-edited contributions to conferences

Milne, A. E. and Lark, R. M. 2006. A new method to estimate boundary models for biological datasets. Cambridge University Press (CUP). https://doi.org/10.1017/S0021859606006290

The role of clay, organic carbon and long-term management on mouldboard plough draught measured on the Broadbalk wheat experiment at Rothamsted

A - Papers appearing in refereed journals

Watts, C. W., Clark, L. J., Poulton, P. R., Powlson, D. S. and Whitmore, A. P. 2006. The role of clay, organic carbon and long-term management on mouldboard plough draught measured on the Broadbalk wheat experiment at Rothamsted. Soil Use and Management. 22 (4), pp. 334-341. https://doi.org/10.1111/j.1475-2743.2006.00054.x

Using a process model and regression kriging to improve predictions of nitrous oxide emissions from soil

A - Papers appearing in refereed journals

Stacey, K. F., Lark, R. M., Whitmore, A. P. and Milne, A. E. 2006. Using a process model and regression kriging to improve predictions of nitrous oxide emissions from soil. Geoderma. 135, pp. 107-117. https://doi.org/10.1016/j.geoderma.2005.11.008

Differential regulation of the Chlamydomonas Nar1 gene family by carbon and nitrogen

A - Papers appearing in refereed journals

Mariscal, V., Moulin, P., Orsel, M., Miller, A. J., Fernandez, E. and Galvan, A. 2006. Differential regulation of the Chlamydomonas Nar1 gene family by carbon and nitrogen. Protist. 157, pp. 421-433. https://doi.org/10.1016/j.protis.2006.06.003

Electrochemical methods and measuring transmembrane ion gradients

B - Book chapters etc edited externally

Miller, A. J. and Wells, D. M. 2006. Electrochemical methods and measuring transmembrane ion gradients. in: Volkov, A. G. (ed.) Plant electrophysiology - theory and methods Springer, Berlin. pp. 15-34

Adaptive sampling and reconnaissance surveys for geostatistical mapping of the soil

A - Papers appearing in refereed journals

Marchant, B. P. and Lark, R. M. 2006. Adaptive sampling and reconnaissance surveys for geostatistical mapping of the soil. European Journal of Soil Science. 57 (6), pp. 831-845. https://doi.org/10.1111/j.1365-2389.2005.00774.x

Baseline values and change in the soil, and implications for monitoring

A - Papers appearing in refereed journals

Lark, R. M., Bellamy, P. H. and Kirk, G. J. D. 2006. Baseline values and change in the soil, and implications for monitoring. European Journal of Soil Science. 57 (6), pp. 916-921. https://doi.org/10.1111/j.1365-2389.2006.00875.x

The representation of complex soil variation on wavelet packet bases

A - Papers appearing in refereed journals

Lark, R. M. 2006. The representation of complex soil variation on wavelet packet bases. European Journal of Soil Science. 57 (6), pp. 868-882. https://doi.org/10.1111/j.1365-2389.2005.00779.x

On spatial prediction of soil properties in the presence of a spatial trend: the empirical best linear unbiased predictor (E-BLUP) with REML

A - Papers appearing in refereed journals

Lark, R. M., Cullis, B. R. and Welham, S. J. 2006. On spatial prediction of soil properties in the presence of a spatial trend: the empirical best linear unbiased predictor (E-BLUP) with REML. European Journal of Soil Science. 57 (6), pp. 787-799. https://doi.org/10.1111/j.1365-2389.2005.00768.x

How far might medium-term weather forecasts improve nitrogen fertiliser use and benefit arable farming in the England and Wales?

A - Papers appearing in refereed journals

Dailey, A. G., Smith, J. U. and Whitmore, A. P. 2006. How far might medium-term weather forecasts improve nitrogen fertiliser use and benefit arable farming in the England and Wales? Agriculture, Ecosystems & Environment. 117, pp. 22-28. https://doi.org/10.1016/j.agee.2006.03.004

On testing biological data for the presence of a boundary

A - Papers appearing in refereed journals

Milne, A. E., Wheeler, H. C. and Lark, R. M. 2006. On testing biological data for the presence of a boundary. Annals of Applied Biology - AAB. 149 (2), pp. 213-222. https://doi.org/10.1111/j.1744-7348.2006.00085.x

Estimating a boundary line model for a biological response by maximum likelihood

A - Papers appearing in refereed journals

Milne, A. E., Ferguson, R. B. and Lark, R. M. 2006. Estimating a boundary line model for a biological response by maximum likelihood. Annals of Applied Biology - AAB. 149 (2), pp. 223-234. https://doi.org/10.1111/j.1744-7348.2006.00086.x

Extracellular Ca2+ ameliorates NaC1-induced K+ loss from Arabidopsis root and leaf cells by controlling plasma membrane K+-permeable channels

A - Papers appearing in refereed journals

Shabala, S., Demidchik, V., Shabala, L., Cuin, T. A., Smith, S. J., Miller, A. J., Davies, J. M. and Newman, I. A. 2006. Extracellular Ca2+ ameliorates NaC1-induced K+ loss from Arabidopsis root and leaf cells by controlling plasma membrane K+-permeable channels. Plant Physiology. 141, pp. 1653-1665. https://doi.org/10.1104/pp.106.082388

Spatio-temporal variability of some metal concentrations in the soil of eastern England, and implications for soil monitoring

A - Papers appearing in refereed journals

Lark, R. M., Bellamy, P. H. and Rawlins, B. G. 2006. Spatio-temporal variability of some metal concentrations in the soil of eastern England, and implications for soil monitoring. Geoderma. 133, pp. 363-379. https://doi.org/10.1016/j.geoderma.2005.08.009

The use of soil survey data to determine the magnitude and extent of historic metal deposition related to atmospheric smelter emissions across Humberside, UK

A - Papers appearing in refereed journals

Rawlins, B. G., Lark, R. M., Webster, R. and O'donnell, K. E. 2006. The use of soil survey data to determine the magnitude and extent of historic metal deposition related to atmospheric smelter emissions across Humberside, UK. Environmental Pollution. 143, pp. 416-426. https://doi.org/10.1016/j.envpol.2005.12.010

Geostatistical mapping of geomorphic variables in the presence of trend

A - Papers appearing in refereed journals

Lark, R. M. and Webster, R. 2006. Geostatistical mapping of geomorphic variables in the presence of trend. Earth Surface Processes And Landforms. 31 (7), pp. 862-874. https://doi.org/10.1002/esp.1296

The geostatistical analysis of experiments at the landscape-scale

A - Papers appearing in refereed journals

Bishop, T. F. A. and Lark, R. M. 2006. The geostatistical analysis of experiments at the landscape-scale. Geoderma. 133, pp. 87-106. https://doi.org/10.1016/j.geoderma.2006.03.039

Calculation of the compression index and precompression stress from soil compression test data

A - Papers appearing in refereed journals

Gregory, A. S., Whalley, W. R., Watts, C. W., Bird, N. R. A., Hallett, P. D. and Whitmore, A. P. 2006. Calculation of the compression index and precompression stress from soil compression test data. Soil & Tillage Research. 89, pp. 45-57. https://doi.org/10.1016/j.still.2005.06.012

Does soil strength play a role in wheat yield losses caused by soil drying?

A - Papers appearing in refereed journals

Whalley, W. R., Clark, L. J., Gowing, D. J. G., Cope, R. E., Lodge, R. J. and Leeds-Harrison, P. B. 2006. Does soil strength play a role in wheat yield losses caused by soil drying? Plant and Soil. 280, pp. 279-290. https://doi.org/10.1007/s11104-005-3485-8

Glutamine transport and feedback regulation of nitrate reductase activity in barley roots leads to changes in cytosolic nitrate pools

A - Papers appearing in refereed journals

Fan, X., Gordon-Weeks, R., Shen, Q. and Miller, A. J. 2006. Glutamine transport and feedback regulation of nitrate reductase activity in barley roots leads to changes in cytosolic nitrate pools. Journal of Experimental Botany. 57, pp. 1333-1340. https://doi.org/10.1093/jxb/erj110

Mechanical impedance and nutrient acquisition in rice

A - Papers appearing in refereed journals

Brown, D. A., Clark, L. J., Howarth, J. R., Parmar, S. and Hawkesford, M. J. 2006. Mechanical impedance and nutrient acquisition in rice. Plant and Soil. 280, pp. 65-76. https://doi.org/10.1007/s11104-005-2508-9

Spatial analysis of model error, illustrated by soil carbon dioxide emissions

A - Papers appearing in refereed journals

Pringle, M. J. and Lark, R. M. 2006. Spatial analysis of model error, illustrated by soil carbon dioxide emissions. Vadose Zone Journal. 5, pp. 168-183. https://doi.org/10.2136/vzj2005.0015

The short-term growth response to salt of the developing barley leaf

A - Papers appearing in refereed journals

Fricke, W., Akhiyarova, G., Wei, W., Alexandersson, E., Miller, A. J., Kjellbom, P. O., Richardson, A., Wojciechowski, T., Schreiber, L., Veselov, D., Kudoyarova, G. and Volkov, V. 2006. The short-term growth response to salt of the developing barley leaf. Journal of Experimental Botany. 57, pp. 1079-1095. https://doi.org/10.1093/jxb/erj095

A comparison of nitrate transport in four different rice (Oryza sativa L.) cultivars

A - Papers appearing in refereed journals

Fan, X., Shen, Q., Ma, Z., Zhu, H., Yin, X. and Miller, A. J. 2005. A comparison of nitrate transport in four different rice (Oryza sativa L.) cultivars. Science in China Series C-Life Sciences. 48(Special issue), pp. 897-911.

Novel method to investigate spatiotemporal trends in bacterial communities in the rhizosphere

C2 - Non-edited contributions to conferences

Dennis, P. G., Miller, A. J. and Hirsch, P. R. 2005. Novel method to investigate spatiotemporal trends in bacterial communities in the rhizosphere. Abstracts 11th Annual UK Molecular Microbial Ecology Group Meeting (MMEG-11), Norwich, 11-12 July 2005 .

Growth zone of barley leaf possesses intrinsic water and ion transport properties

C2 - Non-edited contributions to conferences

Volkov, V., Boscari, A., Amtmann, A., Miller, A. J. and Fricke, W. 2005. Growth zone of barley leaf possesses intrinsic water and ion transport properties. Abstracts SEB Plant Transport Group Meeting, Glasgow, 7-9 September 2005 .

The assessment of point and diffuse metal pollution of soils from an urban geochemical survey of Sheffield, England

A - Papers appearing in refereed journals

Rawlins, B. G., Lark, R. M., O'donnell, K. E., Tye, A. M. and Lister, T. R. 2005. The assessment of point and diffuse metal pollution of soils from an urban geochemical survey of Sheffield, England. Soil Use and Management. 21 (4), pp. 353-362. https://doi.org/10.1079/SUM2005335

A two component high affinity nitrate uptake system in arabidopsis

C2 - Non-edited contributions to conferences

Orsel, M., Chopin, F., Smith, S., Krapp, A., Vedele, F. and Miller, A. J. 2005. A two component high affinity nitrate uptake system in arabidopsis. Abstracts SEB Plant Transport Group Meeting, Glasgow, 7-9 September 2005 .

The effect of glutamine on the cytosolic nitrate pools of barley roots

C1 - Edited contributions to conferences/learned societies

Fan, X., Gordon-Weeks, R., Shen, Q. and Miller, A. J. 2005. The effect of glutamine on the cytosolic nitrate pools of barley roots. Li, C. J. (ed.) Plant Nutrition for Food Security, Human Health and Environmental Protection. Proceedings 15th International Plant Nutrition Colloquium, Beijing, 14-19 September 2005 . Tsinghua University Press, Beijing. pp. 168-169

K+ inward-rectifying shaker-type channel in barley leaf potentially involved in leaf growth

C2 - Non-edited contributions to conferences

Boscari, A., Volkov, V., Wojciechowski, T., Richardson, A., Antmann, A., Miller, A. J. and Fricke, W. 2005. K+ inward-rectifying shaker-type channel in barley leaf potentially involved in leaf growth. Abstracts SEB Plant Transport Group Meeting, Glasgow, 7-9 September 2005 .

Soil properties and pedometrics

B - Book chapters etc edited externally

Lark, R. M. 2005. Soil properties and pedometrics. in: UNESCO Encyclopaedia of life support systems (EOLSS) UNESCO (web-based publication). pp. http://www.eolss.net/

Microelectrode and 133Cs nuclear magnetic resonance evidence for variable cytosolic and cytoplasmic nitrate pools in maize root tips

A - Papers appearing in refereed journals

Radcliffe, S. A., Miller, A. J. and Ratcliffe, R. G. 2005. Microelectrode and 133Cs nuclear magnetic resonance evidence for variable cytosolic and cytoplasmic nitrate pools in maize root tips. Plant, Cell and Environment. 28 (11), pp. 1379-1387. https://doi.org/10.1111/j.1365-3040.2005.01370.x

Multi-scale variability of beach profiles at Duck: a wavelet analysis

A - Papers appearing in refereed journals

Li, Y., Lark, R. M. and Reeve, D. 2005. Multi-scale variability of beach profiles at Duck: a wavelet analysis. Coastal Engineering. 52, pp. 1133-1153.

Spatial analysis of categorical soil variables with the wavelet transform

A - Papers appearing in refereed journals

Lark, R. M. 2005. Spatial analysis of categorical soil variables with the wavelet transform. European Journal of Soil Science. 56 (6), pp. 779-792. https://doi.org/10.1111/j.1365-2389.2005.00713.x

Carbon losses from all soils across England and Wales 1978-2003

A - Papers appearing in refereed journals

Bellamy, P. H., Loveland, P. J., Bradley, R. I., Lark, R. M. and Kirk, G. J. D. 2005. Carbon losses from all soils across England and Wales 1978-2003. Nature. 437 (7056), pp. 245-248. https://doi.org/10.1038/nature04038

Weekly weather generation for a nitrogen turnover model

A - Papers appearing in refereed journals

Dailey, A. G., Smith, J. U. and Whitmore, A. P. 2005. Weekly weather generation for a nitrogen turnover model. Nutrient Cycling in Agroecosystems. 73 (2-3), pp. 257-266. https://doi.org/10.1007/s10705-005-3031-3

Adverse effects of simulated harvesting of short-rotation willow and poplar coppice on vertical pressures and rut depths

A - Papers appearing in refereed journals

Watts, C. W., Clark, L. J., Chamen, W. C. T. and Whitmore, A. P. 2005. Adverse effects of simulated harvesting of short-rotation willow and poplar coppice on vertical pressures and rut depths. Soil & Tillage Research. 84 (2), pp. 192-199. https://doi.org/10.1016/j.still.2004.11.012

Assessing nitrogen-status in two moss species that differ in their nitrogen use

C2 - Non-edited contributions to conferences

Stanley, C. J., Miller, A. J. and Pearson, J. 2005. Assessing nitrogen-status in two moss species that differ in their nitrogen use. Li, C. J. (ed.) Plant Nutrition for Food Security, Human Health and Environmental Protection. Proceedings 15th International Plant Nutrition Colloquium, Beijing, 14-19 September 2005 . Tsinghua University, Beijing. pp. 196-197

Biological and technical processes that mediate micro-aggregation of clays

A - Papers appearing in refereed journals

Watts, C. W., Whalley, W. R., Brookes, P. C., Devonshire, B. J. and Whitmore, A. P. 2005. Biological and technical processes that mediate micro-aggregation of clays. Soil Science. 170 (8), pp. 573-583. https://doi.org/10.1097/01.ss.0000178206.74040.0c

Root nitrogen acquisition and assimilation

A - Papers appearing in refereed journals

Miller, A. J. and Cramer, M. D. 2005. Root nitrogen acquisition and assimilation. Plant and Soil. 274 (1-2), pp. 1-36. https://doi.org/10.1007/s11104-004-0965-1

Light-dark changes in cytosolic nitrogen pools depend on nitrate reductase activity in Arabidopsis leaf cells

A - Papers appearing in refereed journals

Cookson, S. J., Williams, L. E. and Miller, A. J. 2005. Light-dark changes in cytosolic nitrogen pools depend on nitrate reductase activity in Arabidopsis leaf cells. Plant Physiology. 138, pp. 1097-1105.

Wavelet analysis of the scale- and location-dependent correlation of modelled and measured nitrous oxide emissions from soil

A - Papers appearing in refereed journals

Milne, A. E., Lark, R. M., Addiscott, T. M., Goulding, K. W. T., Webster, C. P. and O'flaherty, S. 2005. Wavelet analysis of the scale- and location-dependent correlation of modelled and measured nitrous oxide emissions from soil. European Journal of Soil Science. 56 (1), pp. 3-17. https://doi.org/10.1111/j.1365-2389.2004.00650.x

A two-component high-affinity nitrate uptake system in barley

A - Papers appearing in refereed journals

Tong, Y., Zhou, J-J., Li, Z. and Miller, A. J. 2005. A two-component high-affinity nitrate uptake system in barley. The Plant Journal. 41 (3), pp. 442-450. https://doi.org/10.1111/j.1365-313X.2004.02310.x

Novel method to investigate microbial community structure in microsites in the rhizosphere

C2 - Non-edited contributions to conferences

Dennis, P. G., Miller, A. J., Valsami-Jones, E., Taylor, R. G. and Hirsch, P. R. 2004. Novel method to investigate microbial community structure in microsites in the rhizosphere. Abstracts International Congress on the Rhizosphere: Perspectives and Challenges - a Tribute to Lorenz Hiltner, Munich, 12-17 September 2004 . pp. 184

Tree leaf biomarkers for atmospheric nitrogen deposition

A - Papers appearing in refereed journals

March, S., Miller, A. J., Zhang, X-H. and Pearson, J. 2004. Tree leaf biomarkers for atmospheric nitrogen deposition. Water, Air, & Soil Pollution: Focus. 4 (6), pp. 241-250. https://doi.org/10.1007/s11267-005-3034-8

Ion-coupled transport of inorganic solutes

B - Book chapters etc edited externally

Hawkesford, M. J. and Miller, A. J. 2004. Ion-coupled transport of inorganic solutes. in: Blatt, M. R. (ed.) Membrane transport in plants Blackwell Publishing Oxford. pp. 105-134

Electrophysiological analysis of sensory responses and stylet activity of second stage juveniles of Globodera rostochiensis and plant reactions to nematode invasion

A - Papers appearing in refereed journals

Perry, R. N., Rolfe, R. N., Sheridan, J. P. and Miller, A. J. 2004. Electrophysiological analysis of sensory responses and stylet activity of second stage juveniles of Globodera rostochiensis and plant reactions to nematode invasion. Japanese journal of nematology. 34, pp. 1-10.

Analysing soil variation in two dimensions with the discrete wavelet transform

A - Papers appearing in refereed journals

Lark, R. M. and Webster, R. 2004. Analysing soil variation in two dimensions with the discrete wavelet transform. European Journal of Soil Science. 55 (4), pp. 777-797. https://doi.org/10.1111/j.1365-2389.2004.00630.x

Scale- and location-dependent correlation of nitrous oxide emissions with soil properties: an analysis using wavelets

A - Papers appearing in refereed journals

Lark, R. M., Milne, A. E., Addiscott, T. M., Goulding, K. W. T., Webster, C. P. and O'flaherty, S. 2004. Scale- and location-dependent correlation of nitrous oxide emissions with soil properties: an analysis using wavelets. European Journal of Soil Science. 55 (3), pp. 611-627. https://doi.org/10.1111/j.1365-2389.2004.00620.x

Analysing spatially intermittent variation of nitrous oxide emissions from soil with wavelets and the implications for sampling

A - Papers appearing in refereed journals

Lark, R. M., Milne, A. E., Addiscott, T. M., Goulding, K. W. T., Webster, C. P. and O'flaherty, S. 2004. Analysing spatially intermittent variation of nitrous oxide emissions from soil with wavelets and the implications for sampling. European Journal of Soil Science. 55 (3), pp. 601-610. https://doi.org/10.1111/j.1365-2389.2004.00629.x

Early responses of resistant and susceptible potato roots during invasion by the potato cyst nematode Globodera rostochiensis

A - Papers appearing in refereed journals

Sheridan, J. P., Miller, A. J. and Perry, R. N. 2004. Early responses of resistant and susceptible potato roots during invasion by the potato cyst nematode Globodera rostochiensis. Journal of Experimental Botany. 55 (397), pp. 751-760. https://doi.org/10.1093/jxb/erh063

Climate change and soil functions: consequences of inaction and possible mitigations through land management

C2 - Non-edited contributions to conferences

Powlson, D. S., Falloon, P., Coleman, K., Cox, P., Gaunt, J. L., Shield, I. F., Riche, A. B. and Whitmore, A. P. 2003. Climate change and soil functions: consequences of inaction and possible mitigations through land management. Abstracts ASA-CSSA-SSSA Annual Meeting. Changing Sciences for a Changing World: Building a Broader Vision, Denver, 2-6 November 2003 .

Soil sensors for nitrogen availability

C2 - Non-edited contributions to conferences

Miller, A. J., Wells, D. M., Braven, J., Ebdon, L. and Le Goff, T. 2003. Soil sensors for nitrogen availability. Abstracts DEFRA AR09 Workshop, Cranfield, 14 October 2003 .

Climate change and soil functions: consequences of inaction and possible mitigations through land management

C2 - Non-edited contributions to conferences

Powlson, D. S., Falloon, P., Coleman, K., Cox, P., Gaunt, J. L., Shield, I. F. and Whitmore, A. P. 2003. Climate change and soil functions: consequences of inaction and possible mitigations through land management. Abstracts ASA-CSSA-SSSA Annual Meeting. Changing Sciences for a Changing World: Building a Broader Vision, Denver, 2-6 November 2003 .

In situ measurements of erosion shear stress and geotechnical shear strength of the intertidal sediments of the experimental managed realignment scheme at Tollesbury, Essex, UK

A - Papers appearing in refereed journals

Watts, C. W., Tolhurst, T. J., Black, K. S. and Whitmore, A. P. 2003. In situ measurements of erosion shear stress and geotechnical shear strength of the intertidal sediments of the experimental managed realignment scheme at Tollesbury, Essex, UK. Estuarine, Coastal and Shelf Science. 58, pp. 611-620. https://doi.org/10.1016/S0272-7714(03)00139-2

Novel sensors for measuring soil nitrogen, water availability and strength

C1 - Edited contributions to conferences/learned societies

Miller, A. J., Wells, D. M., Braven, J., Ebdon, L., Le Goff, T., Clark, L. J., Whalley, W. R., Gowing, D. J. G. and Leeds-Harrison, P. B. 2003. Novel sensors for measuring soil nitrogen, water availability and strength. Proceedings BCPC International Congress - Crop Science and Technology, Glasgow, 10-12 November 2003 . pp. 1107-1114

Nutrient dynamics in the rhizosphere

C2 - Non-edited contributions to conferences

Hirsch, P. R. and Miller, A. J. 2003. Nutrient dynamics in the rhizosphere.

How do roots penetrate strong soil?

A - Papers appearing in refereed journals

Clark, L. J., Whalley, W. R. and Barraclough, P. B. 2003. How do roots penetrate strong soil? Plant and Soil. 255, pp. 93-104.

Single-cell measurements of the contributions of cytosolic Na+ and K+ to salt tolerance

A - Papers appearing in refereed journals

Carden, D. E., Walker, D. J., Flowers, T. J. and Miller, A. J. 2003. Single-cell measurements of the contributions of cytosolic Na+ and K+ to salt tolerance. Plant Physiology. 131, pp. 676-683.

Potassium activities in cell compartments of salt-grown barley leaves

A - Papers appearing in refereed journals

Cuin, T. A., Miller, A. J., Laurie, S. A. and Leigh, R. A. 2003. Potassium activities in cell compartments of salt-grown barley leaves. Journal of Experimental Botany. 54, pp. 657-661.

Electrical activity in potato roots induced by Globodera rostochiensis

C2 - Non-edited contributions to conferences

Sheridan, J. P., Miller, A. J. and Perry, R. N. 2003. Electrical activity in potato roots induced by Globodera rostochiensis. Abstracts 55th International Symposium on Crop Protection, Ghent, 6 May 2003 .

Root penetration of strong soil in rainfed lowland rice: comparison of laboratory screens with field performance

A - Papers appearing in refereed journals

Clark, L. J., Cope, R. E., Whalley, W. R., Barraclough, P. B. and Wade, L. J. 2002. Root penetration of strong soil in rainfed lowland rice: comparison of laboratory screens with field performance. Field Crops Research. 76, pp. 189-198. https://doi.org/10.1016/S0378-4290(02)00039-4

Ammonium concentrations inside root cells measured using an improved ion-selective microelectrode

C2 - Non-edited contributions to conferences

Wells, D. M., Pearson, J. and Miller, A. J. 2001. Ammonium concentrations inside root cells measured using an improved ion-selective microelectrode. Abstracts 6th International Symposium on Inorganic Nitrogen Assimilation, Reims, 8-12 July 2001 . pp. 3-50

Root cell heterogeneity in response to changes in nitrogen supply

C2 - Non-edited contributions to conferences

Smith, S. J. and Miller, A. J. 2001. Root cell heterogeneity in response to changes in nitrogen supply. Abstracts 6th International Symposium on Inorganic Nitrogen Assimilation, Reims, 8-12 July 2001 .

Book review: Vacuolar compartments by D. G. Robinson and J. C. Roger

G - Articles in popular magazines and other technical publications

Miller, A. J. 2001. Book review: Vacuolar compartments by D. G. Robinson and J. C. Roger. Annals of Botany. 88, pp. 1219-1220.

Comparison of the properties of two nitrate transporters from Brassica napus

C2 - Non-edited contributions to conferences

Cryer, N., Ingemarsson, B., Pyke, K. and Miller, A. J. 2001. Comparison of the properties of two nitrate transporters from Brassica napus. Abstracts 6th International Symposium on Inorganic Nitrogen Assimilation, Reims, 8-12 July 2001 . pp. 2.11

How dissolved inorganic carbon influences N uptake

C2 - Non-edited contributions to conferences

Cramer, M. and Miller, A. J. 2001. How dissolved inorganic carbon influences N uptake. Abstracts 6th International Symposium on Inorganic Nitrogen Assimilation, Reims, 8-12 July 2001 . pp. 2.1

Light/dark changes in cytosolic nitrate activities in leaf cells: the role of nitrate reductase

C2 - Non-edited contributions to conferences

Cookson, S. J. and Miller, A. J. 2001. Light/dark changes in cytosolic nitrate activities in leaf cells: the role of nitrate reductase. Abstracts 6th International Symposium on Inorganic Nitrogen Assimilation, Reims, 8-12 July 2001 . pp. 3-8

Changes in variance and correlation of soil properties with scale and location: analysis using an adapted maximal overlap discrete wavelet transform

A - Papers appearing in refereed journals

Lark, R. M. and Webster, R. 2001. Changes in variance and correlation of soil properties with scale and location: analysis using an adapted maximal overlap discrete wavelet transform. European Journal of Soil Science. 52 (4), pp. 547-562. https://doi.org/10.1046/j.1365-2389.2001.00420.x

Aggregation of a soil with different cropping histories following the addition of organic materials

A - Papers appearing in refereed journals

Watts, C. W., Whalley, W. R., Longstaff, D. J., White, Robin P., Brookes, P. C. and Whitmore, A. P. 2001. Aggregation of a soil with different cropping histories following the addition of organic materials. Soil Use and Management. 17 (4), pp. 263-268. https://doi.org/10.1111/j.1475-2743.2001.tb00036.x

Analysis of electrical activity in potato roots in response to the potato cyst nematode Globodera rostochiensis

C2 - Non-edited contributions to conferences

Sheridan, J. P., Miller, A. J. and Perry, R. N. 2001. Analysis of electrical activity in potato roots in response to the potato cyst nematode Globodera rostochiensis. Abstracts APS-SON-MSA Joint Meeting, Salt Lake City, 25-29 August 2001 .

An improved Na+-selective microelectrode for intracellular measurements in plant cells

A - Papers appearing in refereed journals

Carden, D. E., Diamond, D. and Miller, A. J. 2001. An improved Na+-selective microelectrode for intracellular measurements in plant cells. Journal of Experimental Botany. 52, pp. 1353-1359.

Transporters responsible for the uptake and partitioning of nitrogenous solutes

A - Papers appearing in refereed journals

Williams, L. E. and Miller, A. J. 2001. Transporters responsible for the uptake and partitioning of nitrogenous solutes. Annual Review of Plant Physiology and Plant Molecular Biology. 52, pp. 659-688.

The use of microelectrodes to investigate compartmentation and the transport of metabolized inorganic ions in plants

A - Papers appearing in refereed journals

Miller, A. J., Cookson, S. J., Smith, S. J. and Wells, D. M. 2001. The use of microelectrodes to investigate compartmentation and the transport of metabolized inorganic ions in plants. Journal of Experimental Botany. 52, pp. 541-549.

Partial mechanical impedance can increase the turgor of seedling pea roots

A - Papers appearing in refereed journals

Clark, L. J., Whalley, W. R. and Barraclough, P. B. 2001. Partial mechanical impedance can increase the turgor of seedling pea roots. Journal of Experimental Botany. 52, pp. 167-171.

The effect of iron concentration, hindered settling, saturating cation and aggregate density of clays on the size distribution determined by gravitation X-ray sedimentometry

A - Papers appearing in refereed journals

Watts, C. W., Whalley, W. R., Bird, N. R. A. and Ashman, M. R. 2000. The effect of iron concentration, hindered settling, saturating cation and aggregate density of clays on the size distribution determined by gravitation X-ray sedimentometry. European Journal of Soil Science. 51 (2), pp. 305-311. https://doi.org/10.1046/j.1365-2389.2000.00311.x

A high affinity fungal nitrate carrier with two transport mechanisms

A - Papers appearing in refereed journals

Zhou, J-J., Trueman, L. J., Boorer, K. J., Theodoulou, F. L., Forde, B. G. and Miller, A. J. 2000. A high affinity fungal nitrate carrier with two transport mechanisms. Journal of Biological Chemistry. 275, pp. 39894-39899.

Improving fertiliser use efficiency in agro-ecosystems and nutrient efficiency in plants

C1 - Edited contributions to conferences/learned societies

Von Wiren, N., Andre, B., Harling, H., Gojon, A., Patriarca, E., Merrick, M., Miller, A. J., Reiss, B. and Frommer, W. B. 2000. Improving fertiliser use efficiency in agro-ecosystems and nutrient efficiency in plants. Devries, G. E. and Metzlaff, K. (ed.) Phytosfere '99: Highlights in European Plant Biotechnology Research and Technology Transfer. Proceedings 2nd European Conference on Plant Biotechnology, Rome, 7-9 June 1999 . Elsevier, Amsterdam. pp. 225-233

Characterisation of nitrate transport using nitrate-selective microelectrodes and heterologous expression in Xenopus oocytes

B - Book chapters etc edited externally

Smith, S. J., Zhou, J-J. and Miller, A. J. 2000. Characterisation of nitrate transport using nitrate-selective microelectrodes and heterologous expression in Xenopus oocytes. in: Canovas, F. M. and Florencio, F. J. (ed.) Avances en el metabolismo del nitrogeno: bioquimica, fisiologia y biologia Universidad de Malaga, Malaga. pp. 345-350

Determination of mosquito bloodmeal pH in situ by ion-selective microelectrode measurement: implications for the regulation of malarial gametogenesis

A - Papers appearing in refereed journals

Billker, O., Miller, A. J. and Sinden, R. E. 2000. Determination of mosquito bloodmeal pH in situ by ion-selective microelectrode measurement: implications for the regulation of malarial gametogenesis. Parasitology. 120 (6), pp. 547-551. https://doi.org/10.1017/S0031182099005946

Comparison of the transport properties of three plant sucrose carriers expressed in Xenopus oocytes

A - Papers appearing in refereed journals

Zhou, J-J. and Miller, A. J. 2000. Comparison of the transport properties of three plant sucrose carriers expressed in Xenopus oocytes. Australian journal of plant physiology. 27, pp. 725-732.

A high affinity nitrate transport system from Chlamydomonas requires two gene products

A - Papers appearing in refereed journals

Zhou, J-J., Fernandez, E., Galvan, A. and Miller, A. J. 2000. A high affinity nitrate transport system from Chlamydomonas requires two gene products. FEBS Letters. 466 (1), pp. 225-227. https://doi.org/10.1016/S0014-5793(00)01955-4

Intracellular measurement of ammonium in Chara corallina using ion-selective microelectrodes

A - Papers appearing in refereed journals

Wells, D. M. and Miller, A. J. 2000. Intracellular measurement of ammonium in Chara corallina using ion-selective microelectrodes. Plant and Soil. 221, pp. 103-106.

Xenopus oocytes as an expression system for plant transporters

A - Papers appearing in refereed journals

Miller, A. J. and Zhou, J-J. 2000. Xenopus oocytes as an expression system for plant transporters. Biochimica et Biophysica Acta (BBA) - Biomembranes. 1465 (1-2), pp. 343-358. https://doi.org/10.1016/S0005-2736(00)00148-6

Site-directed mutagenesis of sucrose carriers confirms the role of phosphorylation in regulating transport activity

C2 - Non-edited contributions to conferences

Zhou, J-J. and Miller, A. J. 2000. Site-directed mutagenesis of sucrose carriers confirms the role of phosphorylation in regulating transport activity. Abstracts Society for Experimental Biology Plant Transport Group Meeting, Hatfield, 6-9 September 2000 .

Development of a novel ammonium-selective microelectrode

C2 - Non-edited contributions to conferences

Wells, D. M., Pearson, J. and Miller, A. J. 2000. Development of a novel ammonium-selective microelectrode. Abstracts Society for Experimental Biology Plant Transport Group Meeting, Hatfield, 6-9 September 2000 .

Are there opportunities for profitable use of precision agriculture in sugar beet crops?

C1 - Edited contributions to conferences/learned societies

Jaggard, K. W., Stafford, J., Lark, R. M. and Fisher, S. 2000. Are there opportunities for profitable use of precision agriculture in sugar beet crops? Proceedings 63rd Congress of the Institut International de Recherches Betteravieres, Interlaken, February 2000 . pp. 317-323

Electrophysiological techniques to study intact, aerial Arabidopsis thaliana leaf cells

C2 - Non-edited contributions to conferences

Cookson, S. J. and Miller, A. J. 2000. Electrophysiological techniques to study intact, aerial Arabidopsis thaliana leaf cells. Abstracts Society for Experimental Biology Plant Transport Group Meeting, Hatfield, 6-9 September 2000 .

Screening the ability of rice roots to overcome the mechanical impedance of wax layers: importance of test conditions and measured criteria

A - Papers appearing in refereed journals

Clark, L. J., Aphale, S. L. and Barraclough, P. B. 2000. Screening the ability of rice roots to overcome the mechanical impedance of wax layers: importance of test conditions and measured criteria. Plant and Soil. 219 (1-2), pp. 187-196. https://doi.org/10.1023/A:1004753900945

A combined RFLP and AFLP linkage map of upland rice (Oryza sativa L.) used to identify QTLs for root-penetration ability

A - Papers appearing in refereed journals

Price, A. H., Steele. K. A., Moore, B. J., Barraclough, P. B. and Clark, L. J. 2000. A combined RFLP and AFLP linkage map of upland rice (Oryza sativa L.) used to identify QTLs for root-penetration ability. Theoretical and Applied Genetics. 100 (1), pp. 49-56. https://doi.org/10.1007/s001220050007

How should plant breeders screen for rice root growth through strong soil?

G - Articles in popular magazines and other technical publications

Clark, L. J., Whalley, W. R., Price, A. H., Wade, L. J. and Barraclough, P. B. 1999. How should plant breeders screen for rice root growth through strong soil?

Screening rice root growth under mechanical impedance. Final Technical Report of DFID Project No. R6373

D1 - Technical reports: non-confidential

Clark, L. J., Whalley, W. R., Dexter, A. R. and Barraclough, P. B. 1999. Screening rice root growth under mechanical impedance. Final Technical Report of DFID Project No. R6373.

Patterns of potassium compartmentation in plant cells as revealed by microelectrodes and microsampling

C1 - Edited contributions to conferences/learned societies

Leigh, R. A., Walker, D. J., Fricke, W., Tomos, A. D. and Miller, A. J. 1999. Patterns of potassium compartmentation in plant cells as revealed by microelectrodes and microsampling. Oosterhuis, D. M. and Berkowitz, G. A. (ed.) Frontiers in Potassium Nutrition: New Perspectives on the Effects of Potassium on Physiology of Plants. Proceedings of a Symposium sponsored by the Potash and Phosphate Institute and the Crop Science Society of America . Potash & Phosphate Institute/Potash & Phosphate Institute of Canada. pp. 63-70

Compartmentation of potassium in salt stressed barley leaves

C2 - Non-edited contributions to conferences

Cuin, T. A., Miller, A. J., Laurie, S. A. and Leigh, R. A. 1999. Compartmentation of potassium in salt stressed barley leaves. Abstracts Society for Experimental Biology Plant Transport Group Meeting, Southampton, 8-10 September 1999 .

Measurement of ammonium in plant cells using ion-selective microelectrodes

C2 - Non-edited contributions to conferences

Wells, D. M., Pearson, J. and Miller, A. J. 1999. Measurement of ammonium in plant cells using ion-selective microelectrodes. Abstracts Society for Experimental Biology Plant Transport Group Meeting, Southampton, 8-10 September 1999 .

Nitrate signalling in plant cells

C2 - Non-edited contributions to conferences

Cookson, S. J., Williams, L. E. and Miller, A. J. 1999. Nitrate signalling in plant cells. Abstracts Society for Experimental Biology Plant Transport Group Meeting, Southampton, 8-10 September 1999 .

The cloning and characterisation of nitrate influx and efflux systems

C2 - Non-edited contributions to conferences

Cryer, N. C., Pyke, K., Forde, B. G. and Miller, A. J. 1999. The cloning and characterisation of nitrate influx and efflux systems. Abstracts Society for Experimental Biology Plant Transport Group Meeting, Southampton, 8-10 September 1999 .

The regulation and kinetic characterization of plant sucrose carriers

C2 - Non-edited contributions to conferences

Zhou, J-J. and Miller, A. J. 1999. The regulation and kinetic characterization of plant sucrose carriers. Abstracts Society for Experimental Biology Plant Transport Group Meeting, Southampton, 8-10 September 1999 .

Nitrate interference with potassium-selective microelectrodes

A - Papers appearing in refereed journals

Cuin, T. A., Miller, A. J., Laurie, S. A. and Leigh, R. A. 1999. Nitrate interference with potassium-selective microelectrodes. Journal of Experimental Botany. 50, pp. 1709-1712.

Do dicotyledons generate greater maximum axial root growth pressures than monocotyledons?

A - Papers appearing in refereed journals

Clark, L. J. and Barraclough, P. B. 1999. Do dicotyledons generate greater maximum axial root growth pressures than monocotyledons? Journal of Experimental Botany. 50 (336), pp. 1263-1266. https://doi.org/10.1093/jxb/50.336.1263

Maximum axial root growth pressure in pea seedlings: effects of measurement techniques and cultivars

A - Papers appearing in refereed journals

Clark, L. J., Bengough, A. G., Whalley, W. R., Dexter, A. R. and Barraclough, P. B. 1999. Maximum axial root growth pressure in pea seedlings: effects of measurement techniques and cultivars. Plant and Soil. 209, pp. 101-109.

Evaluation of agar and agarose gels for studying mechanical impedance in rice roots

A - Papers appearing in refereed journals

Clark, L. J., Whalley, W. R., Leigh, R. A., Dexter, A. R. and Barraclough, P. B. 1999. Evaluation of agar and agarose gels for studying mechanical impedance in rice roots. Plant and Soil. 207, pp. 37-43.

Analysis and elucidation of soil variation using wavelets

A - Papers appearing in refereed journals

Lark, R. M. and Webster, R. 1999. Analysis and elucidation of soil variation using wavelets. European Journal of Soil Science. 50 (2), pp. 185-206. https://doi.org/10.1046/j.1365-2389.1999.t01-1-00234.x

Towards the explanation of within-field variability of yield of winter barley: soil series differences

A - Papers appearing in refereed journals

Lark, R. M., Catt, J. A. and Stafford, J. V. 1998. Towards the explanation of within-field variability of yield of winter barley: soil series differences. The Journal of Agricultural Science. 131, pp. 409-416. https://doi.org/10.1017/S0021859698005978

The role of cytosolic potassium and pH in the growth of barley roots

A - Papers appearing in refereed journals

Walker, D. J., Black, C. R. and Miller, A. J. 1998. The role of cytosolic potassium and pH in the growth of barley roots. Plant Physiology. 118, pp. 957-964.

Characterization of three different higher plant sucrose transporters expressed in Xenopus oocytes

C2 - Non-edited contributions to conferences

Zhou, J-J. and Miller, A. J. 1998. Characterization of three different higher plant sucrose transporters expressed in Xenopus oocytes. Abstracts 11th International Workshop on Plant Membrane Biology, Cambridge, 9-14 August 1998 . pp. 254

Measurement of intracellular ammonium activity using ion-selective microelectrodes

C2 - Non-edited contributions to conferences

Wells, D. M. and Miller, A. J. 1998. Measurement of intracellular ammonium activity using ion-selective microelectrodes. Abstracts 11th International Workshop on Plant Membrane Biology, Cambridge, 9-14 August 1998 . pp. 218

Dynamic measurements of cytosolic nitrate indicate a role in induction

C2 - Non-edited contributions to conferences

Smith, S. J., Ivashikina, N. and Miller, A. J. 1998. Dynamic measurements of cytosolic nitrate indicate a role in induction. Abstracts 11th International Workshop on Plant Membrane Biology, Cambridge, 9-14 August 1998 . pp. 213

The effect of external pH on nitrate uptake and compartmentation in maize roots

C2 - Non-edited contributions to conferences

Ivashikina, N. and Miller, A. J. 1998. The effect of external pH on nitrate uptake and compartmentation in maize roots. Abstracts 5th International Symposium on Inorganic Nitrogen Assimilation, Luso, 1998 .

Root cell cytosolic ion differences between barley cultivars may contribute to salt tolerance

C2 - Non-edited contributions to conferences

Carden, D. E., Walker, D. J., Flowers, T. J. and Miller, A. J. 1998. Root cell cytosolic ion differences between barley cultivars may contribute to salt tolerance. Abstracts 11th International Workshop on Plant Membrane Biology, Cambridge, 9-14 August 1998 . pp. 345

Cloning and functional characterization of a Brassica napus transporter that is able to transport nitrate and histidine

A - Papers appearing in refereed journals

Zhou, J-J., Theodoulou, F. L., Muldin, I., Ingemarsson, B. and Miller, A. J. 1998. Cloning and functional characterization of a Brassica napus transporter that is able to transport nitrate and histidine. Journal of Biological Chemistry. 273 (20), pp. 12017-12023. https://doi.org/10.1074/jbc.273.20.12017

Remobilisation of vacuolar stored nitrate in barley root cells

A - Papers appearing in refereed journals

Van Der Leij, M., Smith, S. J. and Miller, A. J. 1998. Remobilisation of vacuolar stored nitrate in barley root cells. Planta. 205, pp. 64-72.

Simulating trends in soil organic carbon in long-term experiments using the Verberne/MOTOR model

A - Papers appearing in refereed journals

Whitmore, A. P., Klein-Gunnewiek, H., Crocker, G. J., Klir, J., Korschens, M. and Poulton, P. R. 1997. Simulating trends in soil organic carbon in long-term experiments using the Verberne/MOTOR model. Geoderma. 81 (1-2), pp. 137-151. https://doi.org/10.1016/S0016-7061(97)00086-4

A comparison of the performance of nine soil organic matter models using datasets from seven long-term experiments

A - Papers appearing in refereed journals

Smith, P., Smith, J. U., Powlson, D. S., Mcgill, W. B., Arah, J. R. M., Chertov, O. G., Coleman, K., Franko, U., Frolking, S., Jenkinson, D. S., Jensen, L. S., Kelly, R. H., Klein-Gunnewiek, H., Komarov, A. S., Li, C., Molina, J. A. E., Mueller, T., Parton, W. J., Thornley, J. H. M. and Whitmore, A. P. 1997. A comparison of the performance of nine soil organic matter models using datasets from seven long-term experiments. Geoderma. 81 (1-2), pp. 153-225. https://doi.org/10.1016/S0016-7061(97)00087-6

Characterization of low and high affinity nitrate cotransporters expressed in Xenopus oocytes

C2 - Non-edited contributions to conferences

Zhou, J-J., Theodoulou, F. L. and Miller, A. J. 1997. Characterization of low and high affinity nitrate cotransporters expressed in Xenopus oocytes. Abstracts Phytosfere '97, Dublin, 23-25 April 1997 .

Expression in Xenopus oocytes and kinetic characterization of known sucrose carriers

C2 - Non-edited contributions to conferences

Zhou, J-J. and Miller, A. J. 1997. Expression in Xenopus oocytes and kinetic characterization of known sucrose carriers. Abstracts Meeting of EC Source Sink Projects, Pisa, 10-13 September 1997 .

Functional expression of the crnA high affinity nitrate transporter of Aspergillus nidulans in Xenopus oocytes

C2 - Non-edited contributions to conferences

Zhou, J-J., Trueman, L. J., Theodoulou, F. L., Forde, B. G. and Miller, A. J. 1997. Functional expression of the crnA high affinity nitrate transporter of Aspergillus nidulans in Xenopus oocytes. Abstracts SEB Plant Transport Group Workshop, Glasgow, 8-10 September 1997 . pp. N6

Is K+ transport into meristematic cells of barley roots maintained under severe K+ deprivation?

C2 - Non-edited contributions to conferences

Walker, D. J. and Miller, A. J. 1997. Is K+ transport into meristematic cells of barley roots maintained under severe K+ deprivation? Abstracts SEB Plant Transport Group Workshop, Glasgow, 8-10 September 1997 . pp. N1

Effects of salinity on intracellular ion compartmentation

C2 - Non-edited contributions to conferences

Cuin, T. A., Laurie, S. A., Miller, A. J. and Leigh, R. A. 1997. Effects of salinity on intracellular ion compartmentation. Abstracts SEB Plant Transport Group Workshop, Glasgow, 8-10 September 1997 . pp. S7

Salt tolerance of barley: root-shoot transport of sodium

C2 - Non-edited contributions to conferences

Carden, D. and Miller, A. J. 1997. Salt tolerance of barley: root-shoot transport of sodium. Abstracts SEB Plant Transport Group Workshop, Glasgow, 8-10 September 1997 . pp. S8

A kinetic model with ordered cytoplasmic dissociation for SUC1, an Arabidopsis H+/sucrose cotransporter expressed in Xenopus oocytes

A - Papers appearing in refereed journals

Zhou, J-J., Theodoulou, F. L., Sauer, N., Sanders, D. and Miller, A. J. 1997. A kinetic model with ordered cytoplasmic dissociation for SUC1, an Arabidopsis H+/sucrose cotransporter expressed in Xenopus oocytes. Journal Of Membrane Biology. 159, pp. 113-125.

Analysis of monoterpenoids in glandular trichomes of the catmint Nepeta racemosa

A - Papers appearing in refereed journals

Clark, L. J., Hamilton, J. G. C., Chapman, J. V., Rhodes, M. J. C. and Hallahan, D. L. 1997. Analysis of monoterpenoids in glandular trichomes of the catmint Nepeta racemosa. The Plant Journal. 11 (6), pp. 1387-1393. https://doi.org/10.1046/j.1365-313X.1997.11061387.x

Evaluation of techniques for screening the ability of rice roots to grow against mechanical impedance

C2 - Non-edited contributions to conferences

Clark, L. J., Whalley, W. R., Cope, R. E., Aphale, S. L., Barraclough, P. B., Dexter, A. R. and Leigh, R. A. 1997. Evaluation of techniques for screening the ability of rice roots to grow against mechanical impedance. Abstracts 2nd Tansley Conference Putting Plant Physiology On The Map, Bangor, 1-3 April 1997 . pp. 12

Development and essential oil accumulation in glandular trichomes of catmint (Nepeta racemosa )

C2 - Non-edited contributions to conferences

Clark, L. J., Hallahan, D. L., Bourett, T. M., Howard, R. J. and Hamilton, J. G. C. 1996. Development and essential oil accumulation in glandular trichomes of catmint (Nepeta racemosa ). Abstracts SEB Meeting on Control of Plant Development: Genes and Signals, Dublin, 21-25 July 1996 . pp. P21

Characterization of low and high affinity nitrogen cotransporters expressed in Xenopus oocytes

C2 - Non-edited contributions to conferences

Zhou, J-J., Theodoulou, F. L., Muldin, I., Ingemarsson, B. and Miller, A. J. 1996. Characterization of low and high affinity nitrogen cotransporters expressed in Xenopus oocytes. Abstracts SEB Plant Transport Group Workshop, Saltash, 23-25 September 1996 .

Potassium homeostasis in vacuolate plant cells

A - Papers appearing in refereed journals

Walker, D. J., Leigh, R. A. and Miller, A. J. 1996. Potassium homeostasis in vacuolate plant cells. Proceedings of the National Academy of Sciences. 93 (19), pp. 10510-10514.

Determination of pH in the digestive system of the slug Deroceras reticulatum (Muller) using ion-selective microelectrodes

A - Papers appearing in refereed journals

Walker, A. J., Miller, A. J., Glen, D. M. and Shewry, P. R. 1996. Determination of pH in the digestive system of the slug Deroceras reticulatum (Muller) using ion-selective microelectrodes. Journal of Molluscan Studies. 62, pp. 387-390.

Characterisation of high-affinity nitrate transporter homologues from higher plants

C2 - Non-edited contributions to conferences

Trueman, L. J., Dunn, S. M., Jennings, A. J., Onyeocha, I., Theodoulou, F. L., Zhang, H., Zhou, J-J., Miller, A. J. and Forde, B. G. 1996. Characterisation of high-affinity nitrate transporter homologues from higher plants. Abstracts SEB Plant Transport Group Workshop, Saltash, 23-25 September 1996 .

Nitrate transport and compartmentation in cereal root cells

A - Papers appearing in refereed journals

Miller, A. J. and Smith, S. J. 1996. Nitrate transport and compartmentation in cereal root cells. Journal of Experimental Botany. 47, pp. 843-854.

The effect of mechanical impedance on root growth in rice

C2 - Non-edited contributions to conferences

Clark, L. J., Whalley, W. R., Cope, R. E., Dexter, A. R., Barraclough, P. B. and Leigh, R. A. 1996. The effect of mechanical impedance on root growth in rice. Abstracts 5th Symposium of the International Society of Root Research, Clemson, 14-18 July 1996 . pp. 139

Complete mechanical impedance increases the turgor of cells in the apex of pea roots

A - Papers appearing in refereed journals

Clark, L. J., Whalley, W. R., Dexter, A. R., Barraclough, P. B. and Leigh, R. A. 1996. Complete mechanical impedance increases the turgor of cells in the apex of pea roots. Plant, Cell and Environment. 19 (9), pp. 1099-1102. https://doi.org/10.1111/j.1365-3040.1996.tb00217.x

Development of a new Na+-selective microelectrode to measure intracellular Na distribution in barley

C2 - Non-edited contributions to conferences

Carden, D., Flowers, T. and Miller, A. J. 1996. Development of a new Na+-selective microelectrode to measure intracellular Na distribution in barley. Abstracts SEB Plant Transport Group Workshop, Saltash, 23-25 September 1996 .

Mapping and interpreting the yield variation in cereal crops

A - Papers appearing in refereed journals

Stafford, J. V., Ambler, B., Lark, R. M. and Catt, J. A. 1996. Mapping and interpreting the yield variation in cereal crops. Computers and Electronics in Agriculture. 14 (2/3), pp. 101-119. https://doi.org/10.1016/0168-1699(95)00042-9

Kinetic characterisation and mutational analysis of STP1, an Arabidopsis H=/hexose cotransporter expressed in Xenopus oocytes

C2 - Non-edited contributions to conferences

Theodoulou, F. L., Zhou, J-J., Miller, A. J. and Sanders, D. 1995. Kinetic characterisation and mutational analysis of STP1, an Arabidopsis H=/hexose cotransporter expressed in Xenopus oocytes. Abstracts International Conference on the Transport of Photoassimiltes, Canterbury, 13-17 August 1995 . pp. 35

Nitrogen in plant cells

G - Articles in popular magazines and other technical publications

Miller, A. J. 1995. Nitrogen in plant cells. Biological Sciences Review. 8, pp. 34-37.

Characterization of low affinity nitrogen transporters expressed in Xenopus oocytes

C2 - Non-edited contributions to conferences

Zhou, J-J., Theodoulou, F. L., Muldin, I., Ingemarsson, B. and Miller, A. J. 1995. Characterization of low affinity nitrogen transporters expressed in Xenopus oocytes. Abstracts 4th International Symposium on Inorganic Nitrogen Assimilation, Darmstadt, 23-28 July 1995 . pp. 144

Xenopus oocytes as a heterologous expression system

B - Book chapters etc edited externally

Theodoulou, F. L. and Miller, A. J. 1995. Xenopus oocytes as a heterologous expression system. in: Jones, H. (ed.) Methods in molecular biology vol. 49: plant gene transfer and expression protocols Humana Press, Totowa. pp. 317-340

Homeostasis of cytosolic nitrate in barley root cells: measurements with triple-barrelled ion-selective microelectrodes

C2 - Non-edited contributions to conferences

Smith, S. J., Van Der Leij, M. and Miller, A. J. 1995. Homeostasis of cytosolic nitrate in barley root cells: measurements with triple-barrelled ion-selective microelectrodes. Abstracts 4th International Symposium on Inorganic Nitrogen Assimilation, Darmstadt, 23-28 July 1995 . pp. 118

Nitrate and potassium compartmentation in nitrogen and potassium starved barley root cells

C1 - Edited contributions to conferences/learned societies

Miller, A. J., Walker, D. J. and Smith, S. J. 1995. Nitrate and potassium compartmentation in nitrogen and potassium starved barley root cells. Leigh, R. A. and Blake-Kalff, M. M. A. (ed.) Proceedings 2nd Stessnet Conference, Salsomaggiore, Italy, 21-23 September 1995 . pp. 263-268

Ion-selective microelectrodes for measurement of intracellular ion concentrations

B - Book chapters etc edited externally

Miller, A. J. 1995. Ion-selective microelectrodes for measurement of intracellular ion concentrations. in:

Characterization of low affinity nitrogen cotransporters expressed in Xenopus oocytes

C2 - Non-edited contributions to conferences

Zhou, J-J., Theodoulou, F. L., Muldin, I., Ingemarsson, B. and Miller, A. J. 1995. Characterization of low affinity nitrogen cotransporters expressed in Xenopus oocytes. Abstracts 10th International Workshop on Plant Membrane Biology, Regensberg, August 1995 . pp. R38

Cytosolic potassium homeostasis in barley root cells: measurements with triple-barrelled ion-selective microelectrodes

C2 - Non-edited contributions to conferences

Walker, D. J., Leigh, R. A. and Miller, A. J. 1995. Cytosolic potassium homeostasis in barley root cells: measurements with triple-barrelled ion-selective microelectrodes. Abstracts 10th International Workshop on Plant Membrane Biology, Regensberg, August 1995 . pp. R39

Simultaneous measurement of intracellular pH and K+ or NO3- in barley root cells using triple-barrelled ion-selective microelectrodes

A - Papers appearing in refereed journals

Walker, D. J., Smith, S. J. and Miller, A. J. 1995. Simultaneous measurement of intracellular pH and K+ or NO3- in barley root cells using triple-barrelled ion-selective microelectrodes. Plant Physiology. 108, pp. 743-751.

Kinetic characterization and mutational analysis of STP1, an Arabidopsis H+/hexose cotransporter expressed in Xenopus oocytes

C2 - Non-edited contributions to conferences

Theodoulou, F. L., Zhou, J-J., Sanders, D. and Miller, A. J. 1995. Kinetic characterization and mutational analysis of STP1, an Arabidopsis H+/hexose cotransporter expressed in Xenopus oocytes. Abstracts 10th International Workshop on Plant Membrane Biology, Regensberg, August 1995 . pp. R01

Xenopus oocytes as a heterologous expression system for plant proteins

A - Papers appearing in refereed journals

Theodoulou, F. L. and Miller, A. J. 1995. Xenopus oocytes as a heterologous expression system for plant proteins. Molecular Biotechnology. 3, pp. 101-115.

Cytosolic nitrate homeostasis in barley root cells: measurements with triple-barrelled ion-selective microelectrodes

C2 - Non-edited contributions to conferences

Smith, S. J. and Miller, A. J. 1995. Cytosolic nitrate homeostasis in barley root cells: measurements with triple-barrelled ion-selective microelectrodes. Abstracts 10th International Workshop on Plant Membrane Biology, Regensberg, August 1995 . pp. R37

The regulation of nitrate uptake, compartmentation and assimilation in barley

C2 - Non-edited contributions to conferences

Dunn, S. M., Trueman, L. J., Jennings, A., Miller, A. J., Lazzeri, P. A. and Forde, B. G. 1995. The regulation of nitrate uptake, compartmentation and assimilation in barley. Abstracts BBSRC Biochemistry of Metabolic Regulation in Plants (BOMRIP) Meeting, Manchester, 11-13 June 1995 .

Potassium homeostasis in barley root cells: measurements with triple-barrelled ion selective microelectrodes

C2 - Non-edited contributions to conferences

Miller, A. J., Walker, D. J. and Leigh, R. A. 1995. Potassium homeostasis in barley root cells: measurements with triple-barrelled ion selective microelectrodes.

The heterologous expression of H+-coupled transporters in Xenopus oocytes

B - Book chapters etc edited externally

Miller, A. J., Smith, S. J. and Theodoulou, F. L. 1994. The heterologous expression of H+-coupled transporters in Xenopus oocytes. in: Leigh, R. A., Sanders, D. and Blatt, M. R. (ed.) Membrane transport in plants and fungi: molecular mechanisms and control Company of Biologists, Cambridge. pp. 167-177

Physiological and cellular basis for the growth of rice roots through compacted soil

D1 - Technical reports: non-confidential

Clark, L. J., Barraclough, P. B., Leigh, R. A., Whalley, W. R. and Dexter, A. R. 1994. Physiological and cellular basis for the growth of rice roots through compacted soil. Overseas Development Administration (ODA) London.

Comparison of the chemical changes in the rhizosphere of the nickel hyperaccumulator Alyssum murale with the non-accumulator Raphanus sativus

A - Papers appearing in refereed journals

Bernal, M. P., McGrath, S. P., Miller, A. J. and Baker, A. J. M. 1994. Comparison of the chemical changes in the rhizosphere of the nickel hyperaccumulator Alyssum murale with the non-accumulator Raphanus sativus. Plant and Soil. 164 (2), pp. 251-259. https://doi.org/10.1007/BF00010077

Disruptive effects of protein on performance of liquid membrane-based ion-selective microelectrodes

A - Papers appearing in refereed journals

Coombs, H. V., Miller, A. J. and Sanders, D. 1994. Disruptive effects of protein on performance of liquid membrane-based ion-selective microelectrodes. American Journal of Physiology. 267, pp. C1027-C1035.

Expression of nitrate transporters in Xenopus oocytes

C2 - Non-edited contributions to conferences

Zhou, J-J., Theodoulou, F. L. and Miller, A. J. 1994. Expression of nitrate transporters in Xenopus oocytes. Abstracts Society for Experimental Biology Plant Transport Group Workshop, Newcastle, September 1994 .

An investigation of K+ homeostasis in barley root cells using triple-barrelled K+- and pH-selective microelectrodes

C2 - Non-edited contributions to conferences

Walker, D. J., Leigh, R. A., Miller, A. J. and Black, C. R. 1994. An investigation of K+ homeostasis in barley root cells using triple-barrelled K+- and pH-selective microelectrodes. Abstracts Society for Experimental Biology Plant Transport Group Workshop, Newcastle, September 1994 .

Remobilization of stored nitrate in barley root cells

C2 - Non-edited contributions to conferences

Van Der Leij, M. and Miller, A. J. 1994. Remobilization of stored nitrate in barley root cells. Abstracts Society for Experimental Biology Plant Transport Group Workshop, Newcastle, September 1994 .

Kinetics of STP1- an Arabidopsis hexose/proton cotransporter expressed in Xenopus oocytes

C2 - Non-edited contributions to conferences

Theodoulou, F. L., Zhou, J-J., Smith, S. J., Sanders, D. and Miller, A. J. 1994. Kinetics of STP1- an Arabidopsis hexose/proton cotransporter expressed in Xenopus oocytes. Abstracts Society for Experimental Biology Plant Transport Group Workshop, Newcastle, September 1994 .

The temperature-dependence of the maximum axial growth pressure of roots of pea (Pisum sativum L.)

A - Papers appearing in refereed journals

Whalley, W. R., Clark, L. J. and Dexter, A. R. 1994. The temperature-dependence of the maximum axial growth pressure of roots of pea (Pisum sativum L.). Plant and Soil. 163, pp. 211-215.

Structure and function of STPI, the Arabidopsis H+/glucose transporter expressed in Xenopus oocytes

C2 - Non-edited contributions to conferences

Miller, A. J., Parry, M. A. J., Sanders, D. and Theodoulou, F. L. 1994. Structure and function of STPI, the Arabidopsis H+/glucose transporter expressed in Xenopus oocytes. Abstracts BBSRC Plant Molecular Biology II Mid-term Meeting, University of East Anglia, 6-8 July 1994 . pp. 30

Compartmentation of nutrient ions in relation to supply and growth

B - Book chapters etc edited externally

Leigh, R. A., Storey, R., Miller, A. J. and Zhen, R-G. 1994. Compartmentation of nutrient ions in relation to supply and growth. in: Smith, C. J., Zocchi, G., Chiatante, D. and Gallan, J. (ed.) Biochemical mechanisms involved in growth regulation Clarendon Press, Oxford. pp. 63-77

Cloning and analysis of a putative high affinity nitrate transporter from barley

C2 - Non-edited contributions to conferences

Trueman, L. J., Theodoulou, F. L., Miller, A. J. and Forde, B. G. 1994. Cloning and analysis of a putative high affinity nitrate transporter from barley. Abstracts 4th International Congress of Plant Molecular Biology, Amsterdam, 20-24 June 1994 .

Ion-selective microelectrodes

B - Book chapters etc edited externally

Miller, A. J. 1994. Ion-selective microelectrodes. in: Harris, N. and Oparka, K. J. (ed.) Plant cell biology: a practical approach Oxford University Press (OUP) Oxford. pp. 283-296

Modelling the fate of nitrogen in crop and soil in the years following application of 15N-labelled fertilizer to winter wheat

A - Papers appearing in refereed journals

Bradbury, N. J., Whitmore, A. P., Hart, P. B. S. and Jenkinson, D. S. 1993. Modelling the fate of nitrogen in crop and soil in the years following application of 15N-labelled fertilizer to winter wheat. The Journal of Agricultural Science. 121, pp. 363-379.

Remobilisation of nitrate in barley root cells

C2 - Non-edited contributions to conferences

Van Der Leij, M. and Miller, A. J. 1993. Remobilisation of nitrate in barley root cells. Abstracts AFRC Meeting on Plant and Soil Nitrogen Metabolism, Silsoe, December 1993 . pp. 12

Compartmentation of nitrate in barley root cells growing at different nitrogen levels

C2 - Non-edited contributions to conferences

Miller, A. J. and Smith, S. J. 1993. Compartmentation of nitrate in barley root cells growing at different nitrogen levels. Abstracts AFRC Meeting on Plant and Soil Nitrogen Metabolism, Silsoe, December 1993 . pp. 11

Regulation of intracellular potassium levels in barley root cells

C2 - Non-edited contributions to conferences

Walker, D. J., Miller, A. J., Leigh, R. A. and Black, C. R. 1993. Regulation of intracellular potassium levels in barley root cells. Proceedings SEB Symposium Membrane Transport in Plants and Fungi, Wye College, September 1993 . pp. 31

The heterologous expression of H+ cotransport proteins in Xenopus oocytes

C2 - Non-edited contributions to conferences

Miller, A. J., Smith, S. and Theodoulou, F. L. 1993. The heterologous expression of H+ cotransport proteins in Xenopus oocytes. Proceedings SEB Symposium Membrane Transport in Plants and Fungi, Wye College, September 1993 . pp. 8

Nitrate concentrations in cell compartments in relation to nitrogen nutrition

C2 - Non-edited contributions to conferences

Miller, A. J. and Smith, S. 1993. Nitrate concentrations in cell compartments in relation to nitrogen nutrition. Proceedings 1st Stressnet Meeting, Manchester University, April 1993 .

Compartmentation of nitrate in barley root cells

C2 - Non-edited contributions to conferences

Miller, A. J., Zhen, R-G. and Smith, S. J. 1992. Compartmentation of nitrate in barley root cells. Abstracts 3rd International Symposium on Inorganic Nitrogen Assimilation, Tiberias Israel, September 1992 . pp. A38

Measurement of intracellular free magnesium in plant cells using magnesium-selective microelectrodes

C2 - Non-edited contributions to conferences

Coombs, H. V., Miller, A. J. and Sanders, D. 1992. Measurement of intracellular free magnesium in plant cells using magnesium-selective microelectrodes. Abstracts Society for Experimental Biology Plant Transport Group Discussion Meeting, Oxford, September 1992 . pp. 5

Intracellular measurement of K+ in barley root epidermal cells using K+-selective microelectrodes

C2 - Non-edited contributions to conferences

Walker, D. J., Miller, A. J., Leigh, R. A. and Black, C. R. 1992. Intracellular measurement of K+ in barley root epidermal cells using K+-selective microelectrodes. Abstracts Society for Experimental Biology Plant Transport Group Discussion Meeting, Oxford September 1992 . pp. 29

Compartmentation of nitrate in root cells

C2 - Non-edited contributions to conferences

Miller, A. J. and Smith, S. J. 1992. Compartmentation of nitrate in root cells. Abstracts Society for Experimental Biology Plant Transport Group Discussion Meeting, Oxford, September 1992 . pp. 18

Functional expression of a plant plasma membrane transporter in Xenopus oocytes

C2 - Non-edited contributions to conferences

Boorer, K. J., Forde, B. G., Leigh, R. A. and Miller, A. J. 1992. Functional expression of a plant plasma membrane transporter in Xenopus oocytes. Proceedings 9th International Workshop on Plant Membrane Biology, Monterey, July 1992 . Wiley. https://doi.org/10.1016/0014-5793(92)80431-F

Functional expression of a plant plasma membrane transporter in Xenopus oocytes

C2 - Non-edited contributions to conferences

Boorer, K. J., Forde, B. G., Leigh, R. A. and Miller, A. J. 1992. Functional expression of a plant plasma membrane transporter in Xenopus oocytes. American Society of Plant Biologists (ASPB).

Magnesium homeostasis

C2 - Non-edited contributions to conferences

Coombs, H. V., Sanders, D. and Miller, A. J. 1992. Magnesium homeostasis. Oxford University Press (OUP) Oxford.

Functional expression of a plant plasma membrane transporter in Xenopus oocytes

C2 - Non-edited contributions to conferences

Boorer, K. J., Forde, B. G., Leigh, R. A. and Miller, A. J. 1992. Functional expression of a plant plasma membrane transporter in Xenopus oocytes. Wiley.

Measurement of intracellular free magnesium in plant cells using magnesium selective microelectrodes

C2 - Non-edited contributions to conferences

Coombs, H. V., Sanders, D. and Miller, A. J. 1992. Measurement of intracellular free magnesium in plant cells using magnesium selective microelectrodes.

Nitrate is actively transported at the tonoplast of barley root cells.

C2 - Non-edited contributions to conferences

Miller, A. J., Zhen, R-G., Leigh, R. A. and Smith, S. J. 1992. Nitrate is actively transported at the tonoplast of barley root cells. Proceedings 9th International Workshop on Plant Membrane Biology, Monterey, July 1992 . pp. 190

The mechanism of nitrate transport across the tonoplast of barley root cells

A - Papers appearing in refereed journals

Miller, A. J. and Smith, S. J. 1992. The mechanism of nitrate transport across the tonoplast of barley root cells. Planta. 187, pp. 554-557.

Compartmentation of nitrate

C2 - Non-edited contributions to conferences

Miller, A. J., Zhen, R-G. and Smith, S. J. 1992. Compartmentation of nitrate. Oxford University Press (OUP) Oxford.

Potential contribution of ploughed grassland to nitrate leaching

A - Papers appearing in refereed journals

Whitmore, A. P., Bradbury, N. J. and Johnson, P. A. 1992. Potential contribution of ploughed grassland to nitrate leaching. Agriculture, Ecosystems & Environment. 39 (3-4), pp. 221-233. https://doi.org/10.1016/0167-8809(92)90056-H

Functional expression of a plant plasma membrane transporter in Xenopus oocytes

A - Papers appearing in refereed journals

Boorer, K. J., Forde, B. G., Leigh, R. A. and Miller, A. J. 1992. Functional expression of a plant plasma membrane transporter in Xenopus oocytes. FEBS Letters. 302, pp. 166-168. https://doi.org/10.1016/0014-5793(92)80431-F

A comparison of nitrate-selective microelectrodes made with different nitrate sensors and the measurement of intracellular nitrate activities in cells of excised barley roots

A - Papers appearing in refereed journals

Zhen, R-G., Smith, S. J. and Miller, A. J. 1992. A comparison of nitrate-selective microelectrodes made with different nitrate sensors and the measurement of intracellular nitrate activities in cells of excised barley roots. Journal of Experimental Botany. 43, pp. 131-138.

Farming, fertilizers and the nitrate problem

E - Books edited/written by staff member, alone/with others

Addiscott, T. M., Whitmore, A. P. and Powlson, D. S. 1991. Farming, fertilizers and the nitrate problem. CABI International, Wallingford, Oxon (CABI).

Compartmental nitrate concentrations in barley root cells measured with nitrate-selective microelectrodes and by single-cell sap sampling

A - Papers appearing in refereed journals

Zhen, R-G., Koyro, H-W., Leigh, R. A., Tomos, A. D. and Miller, A. J. 1991. Compartmental nitrate concentrations in barley root cells measured with nitrate-selective microelectrodes and by single-cell sap sampling. Planta. 185, pp. 356-361.

A model for calculating the nitrogen requirement of cereals

C2 - Non-edited contributions to conferences

Bradbury, N. J., Whitmore, A. P. and Jenkinson, D. S. 1991. A model for calculating the nitrogen requirement of cereals. Proceedings, 1st Congress of the European Society of Agronomy, Paris, 5-7 December, 1990. pp. Session 2 O 03

Cytosolic calcium homeostasis in fungi: roles of plasma membrane transport and intracellular sequestration of calcium

A - Papers appearing in refereed journals

Miller, A. J., Vogg, G. and Sanders, D. 1991. Cytosolic calcium homeostasis in fungi: roles of plasma membrane transport and intracellular sequestration of calcium. Proceedings of the National Academy of Sciences. 87 (23), pp. 9348-9352. https://doi.org/10.1073/pnas.87.23.9348

Measurement of intracellular nitrate concentrations in Chara using nitrate-selective microelectrodes

A - Papers appearing in refereed journals

Miller, A. J. and Zhen, R-G. 1991. Measurement of intracellular nitrate concentrations in Chara using nitrate-selective microelectrodes. Planta. 184, pp. 47-52.

Simulation of solute leaching in soils of differing permeabilities

A - Papers appearing in refereed journals

Addiscott, T. M. and Whitmore, A. P. 1991. Simulation of solute leaching in soils of differing permeabilities. Soil Use and Management. 7 (2), pp. 94-102. https://doi.org/10.1111/j.1475-2743.1991.tb00856.x

A method for assessing the goodness of computer simulation of soil processes

A - Papers appearing in refereed journals

Whitmore, A. P. 1991. A method for assessing the goodness of computer simulation of soil processes. Journal of Soil Science. 42 (2), pp. 289-299. https://doi.org/10.1111/j.1365-2389.1991.tb00410.x

The Rothamsted soil and crop nitrogen service on Viewdata 1985-1989

A - Papers appearing in refereed journals

Whitmore, A. P., Bland, G. J. and Addiscott, T. M. 1991. The Rothamsted soil and crop nitrogen service on Viewdata 1985-1989. Soil Use and Management. 7 (1), pp. 14-21. https://doi.org/10.1111/j.1475-2743.1991.tb00840.x

Simulation of nitrogen in soil and winter wheat crops: modelling nitrogen turnover through organic matter

A - Papers appearing in refereed journals

Whitmore, A. P., Coleman, K., Bradbury, N. J. and Addiscott, T. M. 1991. Simulation of nitrogen in soil and winter wheat crops: modelling nitrogen turnover through organic matter. Fertilizer Research. 27, pp. 283-291. https://doi.org/10.1007/BF01051134

Simulation of nitrogen in soil and winter wheat crops: a management model that makes best use of limited information

A - Papers appearing in refereed journals

Addiscott, T. M., Bailey, N. J., Bland, G. J. and Whitmore, A. P. 1991. Simulation of nitrogen in soil and winter wheat crops: a management model that makes best use of limited information. Fertilizer Research. 27, pp. 305-312. https://doi.org/10.1007/BF01051136

Studies on the mechanism of sodium transport at the tonoplast of Beta vulgaris. PhD thesis, University of London

F - Theses

Clark, L. J. 1990. Studies on the mechanism of sodium transport at the tonoplast of Beta vulgaris. PhD thesis, University of London. F - Theses

Measurement of intracellular nitrate in giant algal cells using nitrate-selective microelectrodes

C2 - Non-edited contributions to conferences

Miller, A. J. and Zhen, R-G. 1990. Measurement of intracellular nitrate in giant algal cells using nitrate-selective microelectrodes. Annual Meeting of the Society of Experimental Biology, Warwick, 1990. Abstract. pp. P1-4

Cytosolic free calcium homeostasis in plants

A - Papers appearing in refereed journals

Sanders, D., Miller, A. J., Blackford, S., Brosnan, J. M. and Johannes, E. 1990. Cytosolic free calcium homeostasis in plants. Current Topics in Plant Biochemistry and Physiology. 9, pp. 20-37.

The energetics of cytosolic calcium homeostasis in fungal cells

A - Papers appearing in refereed journals

Miller, A. J. and Sanders, D. 1990. The energetics of cytosolic calcium homeostasis in fungal cells. Plant Physiology and Biochemistry. 27, pp. 551-556.

A novel approach for intracellular nitrate measurement.

C2 - Non-edited contributions to conferences

Miller, A. J. and Zhen, R-G. 1989. A novel approach for intracellular nitrate measurement. AFRC Meeting on Plant and Soil Nitrogen Metabolism, Lancaster, 1989, Abstract 44..

Role of plasma membrane transport in cytosolic calcium homeostasis in Neurospora .

B - Book chapters etc edited externally

Miller, A. J. and Sanders, D. 1989. Role of plasma membrane transport in cytosolic calcium homeostasis in Neurospora . in: Plant membrane transport: the current position. J. Dainty, M.I. de Michelis, E. Marre & F. Rasi-Caldogno eds Elsevier, Amsterdam. pp. 273-274

Artefacts associated with the use of acridine orange to measure sodium/proton exchange in tonoplast vesicles.

B - Book chapters etc edited externally

Clark, L. J. and Leigh, R. A. 1989. Artefacts associated with the use of acridine orange to measure sodium/proton exchange in tonoplast vesicles. in: Plant membrane transport: the current position. J. Dainty, M.I. de Michelis, E. Marre & F. Rasi-Caldogno eds Elsevier, Amsterdam. pp. 207-208

The energetics of cytosolic calcium homeostasis in fungal cells.

G - Articles in popular magazines and other technical publications

Miller, A. J. and Sanders, D. 1989. The energetics of cytosolic calcium homeostasis in fungal cells. Plant Physiology and Biochemistry. 27, pp. 551-556.

Computer simulation of nitrogen dynamics in soil.

C1 - Edited contributions to conferences/learned societies

Whitmore, A. P. 1989. Computer simulation of nitrogen dynamics in soil. AFRC Meeting on Plant and Soil Nitrogen Metabolism, Lancaster, 1989, 24..

Theory and use of centrifugal photosedimentation for particle size analysis of clays

F - Theses

Whalley, W. R. 1988. Theory and use of centrifugal photosedimentation for particle size analysis of clays. F - Theses

Computer simulation of the behaviour of nitrogen in the soil and cropin the Broadbalk continuous wheat experiment

B - Book chapters etc edited externally

Whitmore, A. P. and Parry, L.C. 1988. Computer simulation of the behaviour of nitrogen in the soil and cropin the Broadbalk continuous wheat experiment. in: Nitrogen efficiency in agricultural soils London Elsevier. pp. 418-432

Inhibition of tonoplast H+-pyrophosphatase by calcium.

C2 - Non-edited contributions to conferences

Skiera, L., Miller, A. J., Rea, P. A. and Sanders, D. 1988. Inhibition of tonoplast H+-pyrophosphatase by calcium. Meeting of the Plant Transport Group, Bangor, 1988.

Stoichiometry of H+/Ca2+ antiport at the tonoplast is consistent with energized transport of Ca2+ into the vacuole.

C2 - Non-edited contributions to conferences

Blackford, S., Miller, A. J., Rea, P. A. and Sanders, D. 1988. Stoichiometry of H+/Ca2+ antiport at the tonoplast is consistent with energized transport of Ca2+ into the vacuole. Meeting of the Plant Transport Group, Bangor, 1988.

Recent advances in our understanding of the transport of nutrients across vacuolar membranes of plant cells. Agriculture Group Symposium : advances in plant nutrition.

C1 - Edited contributions to conferences/learned societies

Leigh, R. A., Pope, A. J. and Clark, L. J. 1988. Recent advances in our understanding of the transport of nutrients across vacuolar membranes of plant cells. Agriculture Group Symposium : advances in plant nutrition. Wiley.

A simple function for describing the growth and nitrogen uptake of winter cereals.

C1 - Edited contributions to conferences/learned societies

Whitmore, A. P. and Addiscott, T. M. 1988. A simple function for describing the growth and nitrogen uptake of winter cereals. Assessment of nitrogen fertilizer requirement. Proceedings 3rd Meeting NW European Study Group for the Assessment of Nitrogen Fertilizer Requirement, Tune, Denmark, 1988. Ed. N. E. Nielsen.. pp. 137-145

Nitrogen models and soil heterogeneity.

C1 - Edited contributions to conferences/learned societies

Addiscott, T. M. and Whitmore, A. P. 1988. Nitrogen models and soil heterogeneity. Assessment of nitrogen fertilizer requirement. Proceedings 3rd Meeting NW European Study Group for the Assessment of Nitrogen Fertilizer Requirement, Tune, Denmark, 1988. Ed. N. E. Nielsen.. pp. 88-95

A function for describing nitrogen uptake and dry matter production by winter barley crops.

A - Papers appearing in refereed journals

Whitmore, A. P. 1988. A function for describing nitrogen uptake and dry matter production by winter barley crops. Plant and Soil. 111, pp. 53-58. https://doi.org/10.1007/BF02182036

Computer simulation of the behaviour of nitrogen in soil and crop in the Broadbalk continuous wheat experiment

B - Book chapters etc edited externally

Whitmore, A. P. and Parry, L. C. 1988. Computer simulation of the behaviour of nitrogen in soil and crop in the Broadbalk continuous wheat experiment. in: Jenkinson, D. and Smith, K. A. (ed.) Nitrogen efficiency in agricultural soils London Elsevier. pp. 418-432

Nitrogen advice for cereals: present realities and future possibilities

A - Papers appearing in refereed journals

Sylvester-Bradley, R., Addiscott, T. M., Vaidyanathan, L. V., Murray, A. W. A. and Whitmore, A. P. 1987. Nitrogen advice for cereals: present realities and future possibilities. Proceedings - Fertiliser Society, London. 263, pp. 1-36.

Applications of computer modelling to predict mineral nitrogen in soil and nitrogen in crops.

A - Papers appearing in refereed journals

Whitmore, A. P. and Addiscott, T. M. 1987. Applications of computer modelling to predict mineral nitrogen in soil and nitrogen in crops. Soil Use and Management. 3 (1), pp. 38-43. https://doi.org/10.1111/j.1475-2743.1987.tb00707.x

Evaluation of a nitrogen leaching/mineralization model for sugar beet.

A - Papers appearing in refereed journals

Whitmore, A. P., Milford, G. F. J. and Armstrong, M. J. 1987. Evaluation of a nitrogen leaching/mineralization model for sugar beet. Plant and Soil. 101 (1), pp. 61-65. https://doi.org/10.1007/BF02371031

A function for describing nitrogen uptake, dry matter production and rooting by wheat crops.

A - Papers appearing in refereed journals

Whitmore, A. P. and Addiscott, T. M. 1987. A function for describing nitrogen uptake, dry matter production and rooting by wheat crops. Plant and Soil. 101 (1), pp. 51-60. https://doi.org/10.1007/BF02371030

Computer simulation of changes in soil mineral nitrogen and crop nitrogen during autumn, winter and spring.

A - Papers appearing in refereed journals

Addiscott, T. M. and Whitmore, A. P. 1987. Computer simulation of changes in soil mineral nitrogen and crop nitrogen during autumn, winter and spring. The Journal of Agricultural Science. 109 (1), pp. 141-157. https://doi.org/10.1017/S0021859600081089

Application of simple leaching models in heterogeneous soils.

A - Papers appearing in refereed journals

Addiscott, T. M., Heys, P. J. and Whitmore, A. P. 1986. Application of simple leaching models in heterogeneous soils. Geoderma. 38 (1-4), pp. 185-194. https://doi.org/10.1016/0016-7061(86)90014-5

Putting nitrogen predictions on the screen. The soil and crop nitrogen viewdata service from Rothamsted and ADAS.

G - Articles in popular magazines and other technical publications

Addiscott, T. M. and Whitmore, A. P. 1986. Putting nitrogen predictions on the screen. The soil and crop nitrogen viewdata service from Rothamsted and ADAS. Soil and Water. 14, pp. 17-19.

Computer simulation of winter leaching losses of nitrate from soils cropped with winter wheat.

A - Papers appearing in refereed journals

Whitmore, A. P. and Addiscott, T. M. 1986. Computer simulation of winter leaching losses of nitrate from soils cropped with winter wheat. Soil Use and Management. 2 (1), pp. 26-30. https://doi.org/10.1111/j.1475-2743.1986.tb00674.x

Looking to the future

G - Articles in popular magazines and other technical publications

Addiscott, T. M. and Whitmore, A. P. 1986. Looking to the future. Fertiliser Review.

Spatial variation of soil-nitrogen and related factors

A - Papers appearing in refereed journals

Whitmore, A. P., Addiscott, T. M., Webster, R. and Thomas, V. H. 1983. Spatial variation of soil-nitrogen and related factors. Journal of the Science of Food and Agriculture. 34 (3), pp. 268-269. https://doi.org/10.1002/jsfa.2740340310