Transcriptome profiling of the response of Mycosphaerella graminicola isolates to triazole fungicides using cDNA microarrays
C2 - Non-edited contributions to conferences
Cools, H. J., Antoniw, J. F. and Fraaije, B. A. 2006. Transcriptome profiling of the response of Mycosphaerella graminicola isolates to triazole fungicides using cDNA microarrays. Abstracts 11th IUPAC International Congress of Pesticide Chemistry, Kobe, 6-11 August 2006 . pp. 140
| Authors | Cools, H. J., Antoniw, J. F. and Fraaije, B. A. |
|---|---|
| Type | C2 - Non-edited contributions to conferences |
| Year of Publication | 2006 |
| Funder project or code | 507 |
| Project: 4550 | |
| Understanding the evolution and dynamics of fungicide resistance development in cereal pathogens | |
| Page range | 140 |
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A - Papers appearing in refereed journals
Cools, H. J., Hawkins, N. J. and Fraaije, B. A. 2013. Constraints on the evolution of azole resistance in plant pathogenic fungi. Plant Pathology. 62 (Suppl. 1), pp. 36-42. https://doi.org/10.1111/ppa.12128
Simultaneous real-time PCR detection of Fusarium asiaticum, F. ussurianum and F. vorosii, representing the Asian clade of the F. graminearum species complex
A - Papers appearing in refereed journals
Fernandez-Ortuno, D., Waalwijk, C., Van Der Lee, T., Fan, J., Atkins, S., West, J. S. and Fraaije, B. A. 2013. Simultaneous real-time PCR detection of Fusarium asiaticum, F. ussurianum and F. vorosii, representing the Asian clade of the F. graminearum species complex. International Journal of Food Microbiology. 166, pp. 148-154. https://doi.org/10.1016/j.ijfoodmicro.2013.06.007
Detection and molecular characterisation of Pyrenopeziza brassicae isolates resistant to methyl benzimidazole carbamates
A - Papers appearing in refereed journals
Carter, H. E., Cools, H. J., West, J. S., Shaw, M. W. and Fraaije, B. A. 2013. Detection and molecular characterisation of Pyrenopeziza brassicae isolates resistant to methyl benzimidazole carbamates. Pest Management Science. 69 (9), pp. 1040-1048. https://doi.org/10.1002/ps.3585
One step ahead? The evolution of fungicide resistance in Septoria leaf blotch of wheat
C2 - Non-edited contributions to conferences
Lucas, J. A., Cools, H. J. and Fraaije, B. A. 2013. One step ahead? The evolution of fungicide resistance in Septoria leaf blotch of wheat. Abstracts Society for General Microbiology Autumn Conference, Brighton, 2-4 September 2013 . pp. 13
Risk assessment on the impact of environmental usage of triazoles on the development and spread of resistance to medical triazoles in Aspergillus species (ECDC Technical Report)
D1 - Technical reports: non-confidential
Kleinkauf, N., Verweij, P. E., Arendrup, M. C., Donnelly, P. J., Cuenca-Estrella, M., Fraaije, B. A., Melchers, W. J. G., Adriaenssens, N., Kema, G. H. J., Ullmann, A., Bowyer, P. and Denning, D. W. 2013. Risk assessment on the impact of environmental usage of triazoles on the development and spread of resistance to medical triazoles in Aspergillus species (ECDC Technical Report). ECDC, Stockholm. https://doi.org/10.2900/76274
CYP51 paralogues and azole sensitivity in Rhynchosporium commune
C2 - Non-edited contributions to conferences
Hawkins, N. J., Cools, H. J. and Fraaije, B. A. 2013. CYP51 paralogues and azole sensitivity in Rhynchosporium commune. Chinese Society for Plant Pathology.
Evolution and spread of Mycosphaerella graminicola isolates overexpressing CYP51 or carrying different CYP51 variants in response to azole fungicide applications
C2 - Non-edited contributions to conferences
Fraaije, B. A., Atkins, S., Luo, J., De La Fuente, P. D., Hawkins, N. J. and Cools, H. J. 2013. Evolution and spread of Mycosphaerella graminicola isolates overexpressing CYP51 or carrying different CYP51 variants in response to azole fungicide applications. Chinese Society for Plant Pathology.
Update on the evolution and selection for azole and Succinate DeHydrogenase Inhibitor (SDHI) fungicide insensitivity in UK Mycosphaerella graminicola populations
C2 - Non-edited contributions to conferences
Fraaije, B. A. 2013. Update on the evolution and selection for azole and Succinate DeHydrogenase Inhibitor (SDHI) fungicide insensitivity in UK Mycosphaerella graminicola populations. Chinese Society for Plant Pathology.
Detection of azole insensitive CYP51 over-expressing strains of Mycosphaerella graminicola using loop-mediated isothermal amplification (LAMP) assays
C2 - Non-edited contributions to conferences
Fraaije, B. A. and Cools, H. J. 2013. Detection of azole insensitive CYP51 over-expressing strains of Mycosphaerella graminicola using loop-mediated isothermal amplification (LAMP) assays. Chinese Society for Plant Pathology.
Genus-specific CYP51C of Fusarium graminearum identified as a novel CYP51 rather than azole fungicide target sterol 14alpha-demethylases
C2 - Non-edited contributions to conferences
Fan, J., Urban, M., Parker, J. E., Brewer, H. C., Kelly, S. L., Hammond-Kosack, K. E., Fraaije, B. A., Liu, X. and Cools, H. J. 2013. Genus-specific CYP51C of Fusarium graminearum identified as a novel CYP51 rather than azole fungicide target sterol 14alpha-demethylases. Chinese Society for Plant Pathology.
Prothioconazole and prothioconazole-desthio activities against Candida albicans sterol 14-alpha-demethylase
A - Papers appearing in refereed journals
Parker, J. E., Warrilow, A. G. S., Cools, H. J., Fraaije, B. A., Lucas, J. A., Rigdova, K., Griffiths, W. J., Kelly, D. E. and Kelly, S. L. 2013. Prothioconazole and prothioconazole-desthio activities against Candida albicans sterol 14-alpha-demethylase. Applied and Environmental Microbiology. 79, pp. 1639-1645. https://doi.org/10.1128/AEM.03246-12
Using the phenotypic information in the PHI-base database to explore pathogen genomes, transcriptomes and proteomes
C2 - Non-edited contributions to conferences
Urban, M., Antoniw, J. F., Martins, N., Lysenko, A., Grzebyta, J., Janowska-Sedja, E., Saqi, M. and Hammond-Kosack, K. E. 2013. Using the phenotypic information in the PHI-base database to explore pathogen genomes, transcriptomes and proteomes. Abstracts 27th Fungal Genetics Conference, Asilomar, 12-17 March 2013 . pp. 177
Characterization of the sterol 14alpha-demethylases of Fusarium graminearum identifies a novel genus-specific CYP51 function
A - Papers appearing in refereed journals
Fan, J., Urban, M., Parker, J. E., Brewer, H. C., Kelly, S. L., Hammond-Kosack, K. E., Fraaije, B. A., Liu, X. and Cools, H. J. 2013. Characterization of the sterol 14alpha-demethylases of Fusarium graminearum identifies a novel genus-specific CYP51 function. New Phytologist. 198 (3), pp. 821-835. https://doi.org/10.1111/nph.12193
Exploitation of genomics in fungicide research: current status and future perspectives
A - Papers appearing in refereed journals
Cools, H. J. and Hammond-Kosack, K. E. 2013. Exploitation of genomics in fungicide research: current status and future perspectives. Molecular Plant Pathology. 14 (2), pp. 197-210. https://doi.org/10.1111/mpp.12001
Update on mechanisms of azole resistance in Mycosphaerella graminicola and implications for future control
A - Papers appearing in refereed journals
Cools, H. J. and Fraaije, B. A. 2013. Update on mechanisms of azole resistance in Mycosphaerella graminicola and implications for future control. Pest Management Science. 69 (2), pp. 150-155. https://doi.org/10.1002/ps.3348
Role of inoculum sources in Rhynchosporium population dynamics and epidemics on barley
A - Papers appearing in refereed journals
Fitt, B. D. L., Atkins, S. D., Fraaije, B. A., Lucas, J. A., Newton, A. C., Looseley, M., Werner, P., Harrap, D., Ashworth, M., Southgate, J., Phillips, H. and Gilchrist, A. 2012. Role of inoculum sources in Rhynchosporium population dynamics and epidemics on barley. HGCA Project Report. 486.
Investigations into the molecular mechanisms responsible for the decline in sensitivity to DMI fungicides in Mycosphaerella graminicola populations
C2 - Non-edited contributions to conferences
Fraaije, B. A. and Cools, H. J. 2012. Investigations into the molecular mechanisms responsible for the decline in sensitivity to DMI fungicides in Mycosphaerella graminicola populations. American Phytopathological Society (APS).
Reduced azole sensitivity in the oilseed rape pathogen Pyrenopziza brassicae
C2 - Non-edited contributions to conferences
Carter, H. E., Cools, H. J., West, J. S., Shaw, M., Mehl, A. and Fraaije, B. A. 2012. Reduced azole sensitivity in the oilseed rape pathogen Pyrenopziza brassicae. American Phytopathological Society (APS).
Detection and quantification of airborne inoculum of Pyrenopeziza brassicae in Polish and UK winter oilseed rape crops by real-time PCR assays
A - Papers appearing in refereed journals
Karolewski, Z., Kaczmarek, J., Jedryczka, M., Cools, H. J., Fraaije, B. A., Lucas, J. A. and Latunde-Dada, A. O. 2012. Detection and quantification of airborne inoculum of Pyrenopeziza brassicae in Polish and UK winter oilseed rape crops by real-time PCR assays. Grana. 51, pp. 270-279. https://doi.org/10.1080/00173134.2011.653401
Quantitative PCR analysis of abundance of airborne propagules of Leptosphaeria species in air samples from different regions of Poland
A - Papers appearing in refereed journals
Kaczmarek, J., Jedryczka, M., Cools, H. J., Fitt, B. D. L., Lucas, J. A. and Latunde-Dada, A. O. 2012. Quantitative PCR analysis of abundance of airborne propagules of Leptosphaeria species in air samples from different regions of Poland. Aerobiologia. 28, pp. 199-212. https://doi.org/10.1007/s10453-011-9228-9
Defining the predicted protein secretome of the fungal wheat leaf pathogen Mycosphaerella graminicola
A - Papers appearing in refereed journals
Do Amaral, A. M., Antoniw, J. F., Rudd, J. J. and Hammond-Kosack, K. E. 2012. Defining the predicted protein secretome of the fungal wheat leaf pathogen Mycosphaerella graminicola. PLOS ONE. 7, p. e49904 (19 pp). https://doi.org/10.1371/journal.pone.0049904
A refinement of the predicted secretome for the wheat leaf pathogen Mycosphaerella graminicola
C2 - Non-edited contributions to conferences
Do Amaral, A. M., Antoniw, J. F., Rudd, J. J. and Hammond-Kosack, K. E. 2012. A refinement of the predicted secretome for the wheat leaf pathogen Mycosphaerella graminicola. Abstracts IS-MPMI 2012 15th International Congress, Kyoto, 29 July - 2 August 2012 . pp. 104
Overexpression of the sterol 14α-demethylase gene (MgCYP51) in Mycosphaerella graminicola isolates confers a novel azole fungicide sensitivity phenotype.
A - Papers appearing in refereed journals
Cools, H. J., Bayon, C., Atkins, S., Lucas, J. A. and Fraaije, B. A. 2012. Overexpression of the sterol 14α-demethylase gene (MgCYP51) in Mycosphaerella graminicola isolates confers a novel azole fungicide sensitivity phenotype. Pest Management Science. 68 (7), pp. 1034-1040. https://doi.org/10.1002/ps.3263
Chromosomal evolutionary processes in filamentous fungi: macrosynteny and mesosynteny in basidiomycetes and concatenated ascomycete genomes
C2 - Non-edited contributions to conferences
Oliver, R. P., Williams, A., Antoniw, J. F. and Hammond-Kosack, K. E. 2012. Chromosomal evolutionary processes in filamentous fungi: macrosynteny and mesosynteny in basidiomycetes and concatenated ascomycete genomes. Abstracts Dothideomycetes Satellite Meeting, Marburg, 3 April 2012 .
Exploring the early symptomless phase of Fusarium graminearum infection of wheat ears
C2 - Non-edited contributions to conferences
Hammond-Kosack, K. E., Brown, N. A., Urban, M. and Antoniw, J. F. 2012. Exploring the early symptomless phase of Fusarium graminearum infection of wheat ears. Abstracts 11th European Conference on Fungal Genetics, Marburg, 30 March - 2 April 2012 . pp. 74
The predicted secretome of the plant pathogenic fungus Fusarium graminearum: a refined comparative analysis
A - Papers appearing in refereed journals
Brown, N. A., Antoniw, J. F. and Hammond-Kosack, K. E. 2012. The predicted secretome of the plant pathogenic fungus Fusarium graminearum: a refined comparative analysis. PLOS ONE. 7, p. e33731 (14pp). https://doi.org/10.1371/journal.pone.0033731
Genetic basis of control of Rynchosporium secalis infection and symptom expression in barley
A - Papers appearing in refereed journals
Looseley, M. E., Newton, A. C., Atkins, S. D., Fitt, B. D. L., Fraaije, B. A., Thomas, W. T. B., Keith, R., Macaulay, M., Lynott, J. and Harrap, D. 2012. Genetic basis of control of Rynchosporium secalis infection and symptom expression in barley. Euphytica. 184, pp. 47-56. https://doi.org/10.1007/s10681-011-0485-z
Risk assessment studies on succinate dehydrogenase inhibitors, the new weapons in the battle to control Septoria leaf blotch in wheat
A - Papers appearing in refereed journals
Fraaije, B. A., Bayon, C., Atkins, S., Cools, H. J., Lucas, J. A. and Fraaije, M. W. 2012. Risk assessment studies on succinate dehydrogenase inhibitors, the new weapons in the battle to control Septoria leaf blotch in wheat. Molecular Plant Pathology. 13 (3), pp. 263-275. https://doi.org/10.1111/j.1364-3703.2011.00746.x
Resistance to azole fungicides in Mycosphaerella graminicola: mechanisms and management
B - Book chapters etc edited externally
Cools, H. J. and Fraaije, B. A. 2012. Resistance to azole fungicides in Mycosphaerella graminicola: mechanisms and management. in: Thind, T. S. (ed.) Fungicide resistance in crop protection: risk and management CABI International, Wallingford, Oxon (CABI). pp. 64-77
Development of QoI resistance in Ramularia collo-cygni populations
C1 - Edited contributions to conferences/learned societies
Fountaine, J. M., Burnett, F. J. and Fraaije, B. A. 2011. Development of QoI resistance in Ramularia collo-cygni populations. Dehne, H. W. (ed.) Modern fungicides and antifungal compounds VI . DPG, Braunschweig. pp. 199-202
Molecular mechanisms of altered triazole sensitivity in Rhynchosporium secalis
C1 - Edited contributions to conferences/learned societies
Hawkins, N. J., Cools, H. J., Shaw, M. W., Sierotzki, H. and Fraaije, B. A. 2011. Molecular mechanisms of altered triazole sensitivity in Rhynchosporium secalis. Dehne, H. W. (ed.) Modern fungicides and antifungal compounds VI . DPG, Braunschwieg. pp. 129-134
The CYP51C gene, a novel and useful phylogenetic marker to distinguish different Fusarium species on cereals
C1 - Edited contributions to conferences/learned societies
Fernandez-Ortuno, D., Loza-Reyes, E., Rogers, S. L. and Fraaije, B. A. 2011. The CYP51C gene, a novel and useful phylogenetic marker to distinguish different Fusarium species on cereals. Dehne, H. W. (ed.) Modern fungicides and antifungal compounds VI . DPG, Braunschweig. pp. 413-416
Functional characterisation of Mycosphaerella graminicola sterol 14alpha-demethylase variants resistant to azole fungicides
C1 - Edited contributions to conferences/learned societies
Cools, H. J., Parker, J. E., Kelly, D. E., Lucas, J. A., Kelly, S. L. and Fraaije, B. A. 2011. Functional characterisation of Mycosphaerella graminicola sterol 14alpha-demethylase variants resistant to azole fungicides. Dehne, H. W. (ed.) Modern fungicides and antifungal compounds VI . DPG, Braunschweig. pp. 123-128
OmniMapFree a unified tool to visualise and explore sequenced genomes
A - Papers appearing in refereed journals
Antoniw, J. F., Beacham, A. M., Baldwin, T. K., Urban, M., Rudd, J. J. and Hammond-Kosack, K. E. 2011. OmniMapFree a unified tool to visualise and explore sequenced genomes. BMC Bioinformatics. 12, p. 447 (14pp). https://doi.org/10.1186/1471-2105-12-447
Molecular modelling of the emergence of azole resistance in Mycosphaerella graminicola
A - Papers appearing in refereed journals
Mullins, J. G. L., Parker, J. E., Cools, H. J., Togawa, R. C., Lucas, J. A., Fraaije, B. A., Kelly, D. E. and Kelly, S. L. 2011. Molecular modelling of the emergence of azole resistance in Mycosphaerella graminicola. PLOS ONE. 6, p. e20973. https://doi.org/10.1371/journal.pone.0020973
Effects of fungicide on growth of Leptosphaeria maculans and L. biglobosa in relation to development of phoma stem canker on oilseed rape (Brassica napus)
A - Papers appearing in refereed journals
Huang, Y. J., Hood, J. R., Eckert, M. R., Stonard, J. F., Cools, H. J., King, G. J., Rossall, S., Ashworth, M. and Fitt, B. D. L. 2011. Effects of fungicide on growth of Leptosphaeria maculans and L. biglobosa in relation to development of phoma stem canker on oilseed rape (Brassica napus). Plant Pathology. 60 (4), pp. 607-620. https://doi.org/10.1111/j.1365-3059.2010.02416.x
Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity and stealth pathogenesis
A - Papers appearing in refereed journals
Goodwin, S. B., Ben M'barek, S., Dhillon, B., Wittenberg, A. H. J., Crane, C. F., Hane, J. K., Foster, A. J., Van Der Lee, T. A. J., Grimwood, J., Aerts, A., Antoniw, J. F., Bailey, A., Bluhm, B., Bowler, J., Bristow, J., Van Der Burgt, A., Canto-Canche, B., Churchill, A. C. L., Conde-Ferraez, L., Cools, H. J., Coutinho, P. M., Csukai, M., Dehal, P., De Wit, P., Donzelli, B., Van De Geest, H. C., Van Ham, R. C. H. J., Hammond-Kosack, K. E. and Rudd, J. J. 2011. Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity and stealth pathogenesis. PLOS Genetics. 7, p. e1002070 (17pp). https://doi.org/10.1371/journal.pgen.1002070
Impact of recently emerged sterol 14alpha-demethylase (CYP51) variants of Mycosphaerella graminicola on azole fungicide sensitivity
A - Papers appearing in refereed journals
Cools, H. J., Mullins, J. G. L., Fraaije, B. A., Parker, J. E., Kelly, D. E., Lucas, J. A. and Kelly, S. L. 2011. Impact of recently emerged sterol 14alpha-demethylase (CYP51) variants of Mycosphaerella graminicola on azole fungicide sensitivity. Applied and Environmental Microbiology. 77, pp. 3830-3837. https://doi.org/10.1128/AEM.00027-11
Derivation and testing of a model to predict selection for fungicide resistance
A - Papers appearing in refereed journals
Hobbelen, P. H. F., Paveley, N. D., Fraaije, B. A., Lucas, J. A. and Van Den Bosch, F. 2011. Derivation and testing of a model to predict selection for fungicide resistance. Plant Pathology. 60 (2), pp. 304-313. https://doi.org/10.1111/j.1365-3059.2010.02380.x
Mechanism of binding of prothioconazole to Mycosphaerella graminicola CYP51 differs from that of other azole antifungals
A - Papers appearing in refereed journals
Parker, J. E., Warrilow, A. G. S., Cools, H. J., Martel, C. M., Nes, W. D., Fraaije, B. A., Lucas, J. A., Kelly, D. E. and Kelly, S. L. 2011. Mechanism of binding of prothioconazole to Mycosphaerella graminicola CYP51 differs from that of other azole antifungals. Applied and Environmental Microbiology. 77, pp. 1460-1465. https://doi.org/10.1128/AEM.01332-10
The use of a CYP51C gene based on PCR-RFLP assay for simultaneous detection and identification of Fusarium avenaceum and F. tricinctum in wheat
A - Papers appearing in refereed journals
Fernandez-Ortuno, D., Atkins, S. L. and Fraaije, B. A. 2011. The use of a CYP51C gene based on PCR-RFLP assay for simultaneous detection and identification of Fusarium avenaceum and F. tricinctum in wheat. International Journal of Food Microbiology. 145, pp. 370-374. https://doi.org/10.1016/j.ijfoodmicro.2011.01.011
Impacts of changing air composition on severity of arable crop disease epidemics
A - Papers appearing in refereed journals
Fitt, B. D. L., Fraaije, B. A., Chandramohan, P. and Shaw, M. W. 2011. Impacts of changing air composition on severity of arable crop disease epidemics. Plant Pathology. 60 (1), pp. 44-53. https://doi.org/10.1111/j.1365-3059.2010.02413.x
Investigating altered triazole sensitivity in Rhynchosporium secalis
C2 - Non-edited contributions to conferences
Hawkins, N. D., Cools, H. J., Shaw, M. W., Sierotzki, H. and Fraaije, B. A. 2010. Investigating altered triazole sensitivity in Rhynchosporium secalis. American Phytopathological Society (APS).
The CYP51C gene, a novel marker for phylogenetic analysis of Fusarium species
C2 - Non-edited contributions to conferences
Fernandez-Ortuno, D., Loza-Reyes, E., Rogers, S. L. and Fraaije, B. A. 2010. The CYP51C gene, a novel marker for phylogenetic analysis of Fusarium species.
Succinate dehydrogenase inhibitor resistance risk assessment studies on Mycosphaerella graminicola the causal agent of septoria leaf blotch
C2 - Non-edited contributions to conferences
Bayon, C., Fraaije, M. W., Cools, H. J., Rogers, S. L., Lucas, J. A. and Fraaije, B. A. 2010. Succinate dehydrogenase inhibitor resistance risk assessment studies on Mycosphaerella graminicola the causal agent of septoria leaf blotch.
Derivation and validation of a model to predict selection for fungicide resistance
C2 - Non-edited contributions to conferences
Hobbelen, P. H., Paveley, N. D., Fraaije, B. A., Lucas, J. A. and Van Den Bosch, F. 2010. Derivation and validation of a model to predict selection for fungicide resistance.
The CYP51C gene, a reliable marker to resolve interspecific phylogenetic relationships within the Fusarium species complex and a novel target for species-specific PCR
A - Papers appearing in refereed journals
Fernandez-Ortuno, D., Loza-Reyes, E., Atkins, S. L. and Fraaije, B. A. 2010. The CYP51C gene, a reliable marker to resolve interspecific phylogenetic relationships within the Fusarium species complex and a novel target for species-specific PCR. International Journal of Food Microbiology. 144, pp. 301-309. https://doi.org/10.1016/j.ijfoodmicro.2010.10.013
Prothioconazole binds to Mycosphaerella graminicola CYP51 by a different mechanism compared to other azole antifungals
C2 - Non-edited contributions to conferences
Parker, J. E., Warrilow, A., Cools, H. J., Martel, C. M., Nes, W. D., Fraaije, B. A., Lucas, J. A., Kelly, D. E. and Kelly, S. L. 2010. Prothioconazole binds to Mycosphaerella graminicola CYP51 by a different mechanism compared to other azole antifungals. Abstracts 10th International Symposium on Cytochrome P450 Biodiversity and Biotechnology, Woods Hole, 3-7 October 2010 .
CYP51 paralogues and azole fungicide sensitivity in Rhynchosporium secalis
C2 - Non-edited contributions to conferences
Hawkins, N. J., Cools, H. J., Sierotzki, H., Shaw, M. and Fraaije, B. A. 2010. CYP51 paralogues and azole fungicide sensitivity in Rhynchosporium secalis. Abstracts 10th International Symposium on Cytochrome P450 Biodiversity and Biotechnology, Woods Hole, 3-7 October 2010 .
Recent evolution of P450 sterol 14a-demethylase (CYP51) of the wheat pathogen Mycosphaerella graminicola in response to selection by azole fungicides
C2 - Non-edited contributions to conferences
Cools, H. J. 2010. Recent evolution of P450 sterol 14a-demethylase (CYP51) of the wheat pathogen Mycosphaerella graminicola in response to selection by azole fungicides. Abstracts 10th International Symposium on Cytochrome P450 Biodiversity and Biotechnology, Woods Hole, 3-7 October 2010 .
A partial chromosomal deletion caused by random plasmid integration resulted in a reduced virulence phenotype in Fusarium graminearum
A - Papers appearing in refereed journals
Baldwin, T. K., Gaffoor, I., Antoniw, J. F., Andries, C., Guenther, J., Urban, M., Hallen-Adams, H. E., Pitkin, J., Hammond-Kosack, K. E. and Trail, F. 2010. A partial chromosomal deletion caused by random plasmid integration resulted in a reduced virulence phenotype in Fusarium graminearum. Molecular Plant-Microbe Interactions - MPMI. 23 (8), pp. 1083-1096. https://doi.org/10.1094/MPMI-23-8-1083
Characterization of siRNAs derived from rice stripe virus in infected rice plants by deep sequencing
A - Papers appearing in refereed journals
Yan, F., Zhang, H., Adams, M. J., Yang, J., Peng, J., Antoniw, J. F., Zhou, Y. and Chen, J. 2010. Characterization of siRNAs derived from rice stripe virus in infected rice plants by deep sequencing. Archives of Virology. 155, pp. 935-940. https://doi.org/10.1007/s00705-010-0670-8
Molecular mechanisms of altered fungicide sensitivity in Rhynchosporium secalis
C2 - Non-edited contributions to conferences
Hawkins, N. D., Cools, H. J., Shaw, M. W., Sierotzki, H. and Fraaije, B. A. 2010. Molecular mechanisms of altered fungicide sensitivity in Rhynchosporium secalis. Abstracts 16th International Reinhardsbrunn Symposium: Modern Fungicides and Antifungal Compounds, Friedrichroda, 25-29 April 2010 . pp. 50
The identification of a virulence factor-enriched micro-region in the Fusarium graminearum genome
C2 - Non-edited contributions to conferences
Hammond-Kosack, K. E., Antoniw, J. F., Freeman, A., Urban, M., Welham, S. J. and Beacham, A. 2010. The identification of a virulence factor-enriched micro-region in the Fusarium graminearum genome. Abstracts Fusarium Workshop, Amsterdam, 28-29 March 2010 .
Evolutionary bi-stability in pathogen transmission mode
A - Papers appearing in refereed journals
Van Den Bosch, F., Fraaije, B. A., Van Den Berg, F. and Shaw, M. W. 2010. Evolutionary bi-stability in pathogen transmission mode. Proceedings of the Royal Society of London Series B Biological Sciences. 277, pp. 1735-1742. https://doi.org/10.1098/rspb.2009.2211
Effects of DMI fungicides on selection of CYP51 variants in UK populations of Mycosphaerella graminicola
C2 - Non-edited contributions to conferences
Fraaije, B. A., Rogers, S., Bayon, C., Cools, H. J. and Lucas, J. A. 2010. Effects of DMI fungicides on selection of CYP51 variants in UK populations of Mycosphaerella graminicola. Abstracts 16th International Reinhardsbrunn Symposium: Modern Fungicides and Antifungal Compounds, Friedrichroda, 25-29 April 2010 . pp. 84
Development of QO1 resistance in Ramularia collocygni populations
C2 - Non-edited contributions to conferences
Fountaine, J. M., Burnett, F. J. and Fraaije, B. A. 2010. Development of QO1 resistance in Ramularia collocygni populations. Abstracts 16th International Reinhardsbrunn Symposium: Modern Fungicides and Antifungal Compounds, Friedrichroda, 25-29 April 2010 . pp. 136
The CYP51C gene, a novel and useful phylogenetic marker to distinguish different Fusarium species on cereals
C2 - Non-edited contributions to conferences
Fernandez-Ortuno, D., Loza-Reyes, E., Rogers, S. L. and Fraaije, B. A. 2010. The CYP51C gene, a novel and useful phylogenetic marker to distinguish different Fusarium species on cereals. Abstracts 16th International Reinhardsbrunn Symposium: Modern Fungicides and Antifungal Compounds, Friedrichroda, 25-29 April 2010 . pp. 196
Heterologous expression of mutated eburicol 14alpha-demethylase (CYP51) proteins of Mycosphaerella graminicola to assess effects on azole fungicide sensitivity and intrinsic protein function
A - Papers appearing in refereed journals
Cools, H. J., Parker, J. E., Kelly, D. E., Lucas, J. A., Fraaije, B. A. and Kelly, S. L. 2010. Heterologous expression of mutated eburicol 14alpha-demethylase (CYP51) proteins of Mycosphaerella graminicola to assess effects on azole fungicide sensitivity and intrinsic protein function. Applied and Environmental Microbiology. 76, pp. 2866-2872. https://doi.org/10.1128/AEM.02158-09
Functional characterisation of Mycosphaerella graminicola sterol 14alpha-demethylase (MgCYP51) variants resistant to azole fungicides
C2 - Non-edited contributions to conferences
Cools, H. J., Parker, J. E., Motteram, J., Kelly, D. E., Lucas, J. A., Rudd, J. J., Kelly, S. L. and Fraaije, B. A. 2010. Functional characterisation of Mycosphaerella graminicola sterol 14alpha-demethylase (MgCYP51) variants resistant to azole fungicides. Abstracts 16th International Reinhardsbrunn Symposium: Modern Fungicides and Antifungal Compounds, Friedrichroda, 25-29 April 2010 .
Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
A - Papers appearing in refereed journals
Ma, L-J., Van Der Does, H. C., Borkovich, K. A., Coleman, J. J., Daboussi, M-J., Di Pietro, A., Dufresne, M., Freitag, M., Grabherr, M., Henrissat, B., Houterman, P. M., Kang, S., Shim, W-B., Woloshuk, C., Xie, X., Xu, J-R., Antoniw, J. F., Baker, S. E., Bluhm, B. H., Breakspear, A., Brown, D. W., Butchko, R. A. E., Chapman, S., Coulson, R., Coutinho, P., Danchin, E. G. J., Diener, A., Gale, L. R. and Hammond-Kosack, K. E. 2010. Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. Nature. 464, pp. 367-373. https://doi.org/10.1038/nature08850
The role of seeds and airborne inoculum in the initiation of leaf blotch (Rhynchosporium secalis) epidemics in winter barley
A - Papers appearing in refereed journals
Fountaine, J. M., Shaw, M. W., Ward, E. and Fraaije, B. A. 2010. The role of seeds and airborne inoculum in the initiation of leaf blotch (Rhynchosporium secalis) epidemics in winter barley. Plant Pathology. 59 (2), pp. 330-337. https://doi.org/10.1111/j.1365-3059.2009.02213.x
Rynchosporium secalis: a historical perspective
C2 - Non-edited contributions to conferences
Atkins, S. D., King, K. M., Fraaije, B. A. and Newton, A. C. 2010. Rynchosporium secalis: a historical perspective. Proceedings Dundee Conference on Crop Protection in Northern Britain, Dundee, 23-24 February 2010 . pp. 103-108
The epidemiological importance of asymptomatic infection of winter barley by Rhynchosporium secalis and its consequences for crop protection and breeding
C2 - Non-edited contributions to conferences
Atkins, S. D., Fitt, B. D. L., Fraaije, B. A., Harvey, S., Lynott, J. and Newton, A. C. 2010. The epidemiological importance of asymptomatic infection of winter barley by Rhynchosporium secalis and its consequences for crop protection and breeding. Proceedings Dundee Conference on Crop Protection in Northern Britain, Dundee, 23-24 February 2010 . pp. 81-86
Identification and characterisation of Mycosphaerella graminicola secreted or surface-associated proteins with variable intragenic coding repeats
A - Papers appearing in refereed journals
Rudd, J. J., Antoniw, J. F., Marshall, R., Motteram, J., Fraaije, B. A. and Hammond-Kosack, K. E. 2010. Identification and characterisation of Mycosphaerella graminicola secreted or surface-associated proteins with variable intragenic coding repeats. Fungal Genetics and Biology. 47, pp. 19-32. https://doi.org/10.1016/j.fgb.2009.10.009
Pest wars - press paper
C2 - Non-edited contributions to conferences
Lucas, J. A., Field, L. M., Cools, H. J. and Hammond-Kosack, K. E. 2009. Pest wars - press paper. Pest Wars: British Science Festival, Guildford, 8 September 2009 .
Molecular and genetic studies on Fusarium Ear Blight disease of wheat
C2 - Non-edited contributions to conferences
Hammond-Kosack, K. E., Kanyuka, K., Brown, N. A., Beacham, A. M., Cuzick, A., Antoniw, J. F. and Urban, M. 2009. Molecular and genetic studies on Fusarium Ear Blight disease of wheat. Abstracts 2009 National Fusarium Head Blight Forum, Orlando, 7-9 December 2009 .
Chemical induced defences in association with wheat leaf infection by Septoria tritici . Confidential report for DuPont Ltd
D1 - Technical reports: non-confidential
Rudd, J. J., Motteram, J. and Antoniw, J. F. 2009. Chemical induced defences in association with wheat leaf infection by Septoria tritici . Confidential report for DuPont Ltd.
Virgaviridae: a new family of rod-shaped plant viruses
A - Papers appearing in refereed journals
Adams, M. J., Antoniw, J. F. and Kreuze, J. 2009. Virgaviridae: a new family of rod-shaped plant viruses. Archives of Virology. 154, pp. 1967-1972. https://doi.org/10.1007/s00705-009-0506-6
Sterol content analysis suggests altered eburicol 14alpha-demethylase (CYP51) activity in isolates of Mycosphaerella graminicola adapted to azole fungicides
A - Papers appearing in refereed journals
Bean, T. P., Cools, H. J., Lucas, J. A., Hawkins, N. D., Ward, J. L., Shaw, M. W. and Fraaije, B. A. 2009. Sterol content analysis suggests altered eburicol 14alpha-demethylase (CYP51) activity in isolates of Mycosphaerella graminicola adapted to azole fungicides. FEMS Microbiology Letters. 296, pp. 266-273. https://doi.org/10.1111/j.1574-6968.2009.01645.x
Impact of proquinazid on appressorial development of the barley powdery mildew fungus Blumeria graminis f.sp hordei
A - Papers appearing in refereed journals
Gilbert, S. R., Cools, H. J., Fraaije, B. A., Bailey, A. M. and Lucas, J. A. 2009. Impact of proquinazid on appressorial development of the barley powdery mildew fungus Blumeria graminis f.sp hordei. Pesticide Biochemistry and Physiology. 94, pp. 127-132. https://doi.org/10.1016/j.pestbp.2009.04.011
Barley elicits a similar early basal defence response during host and non-host interactions with Polymyxa root parasites
A - Papers appearing in refereed journals
Mcgrann, G. R. D., Townsend, B. J., Antoniw, J. F., Asher, M. J. C. and Mutasa-Göttgens, E. S. 2009. Barley elicits a similar early basal defence response during host and non-host interactions with Polymyxa root parasites. European Journal of Plant Pathology. 123 (1), pp. 5-15. https://doi.org/10.1007/s10658-008-9332-z
Functional analysis of reactive oxygen species-related genes in the wheat pathogen Mycosphaerella graminicola
C2 - Non-edited contributions to conferences
Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2008. Functional analysis of reactive oxygen species-related genes in the wheat pathogen Mycosphaerella graminicola. Abstracts Gordon Research Conference on Cellular and Molecular Fungal Biology, Holderness, New Hampshire, 29 June - 4 July 2008 .
Genomic analysis of transcriptional regulators of Fusarium graminearum
C2 - Non-edited contributions to conferences
Coulson, R., Urban, M., Antoniw, J. F. and Hammond-Kosack, K. E. 2008. Genomic analysis of transcriptional regulators of Fusarium graminearum.
Understanding fungicide mixtures to control Rhynchosporium in barley and minimise resistance shifts. HGCA Project Report No. 436
D1 - Technical reports: non-confidential
Oxley, S. J. P., Burnett, F., Hunter, E,. A., Fraaije, B. A., Cooke, L. R., Mercer, P. C. and Gilchrist, A. 2008. Understanding fungicide mixtures to control Rhynchosporium in barley and minimise resistance shifts. HGCA Project Report No. 436. Home Grown Cereals Authority (HGCA) London.
The final straw: crop archives and the recent history of cereal pathosystems
C1 - Edited contributions to conferences/learned societies
Lucas, J. A. and Fraaije, B. A. 2008. The final straw: crop archives and the recent history of cereal pathosystems. Jellis, G. and Edwards, C. (ed.) Cereal pathosystems: papers from BSPP Presidential Meeting, London, 16-17 December 2008 . Home Grown Cereals Authority (HGCA) London. pp. 103-115
Adaptation of Mycosphaerella graminicola populations to azole fungicides in the UK
C1 - Edited contributions to conferences/learned societies
Fraaije, B. A., Cools, H. J., Motteram, J., Gilbert, S. R., Kim, S-H. and Lucas, J. A. 2008. Adaptation of Mycosphaerella graminicola populations to azole fungicides in the UK. Deising, H. B., Lyr, H., Russell, P. E., Kuck, K. H., Gisi, U. and Dehne, H. W. (ed.) Modern Fungicides and Antifungal Compounds V: Proceedings 15th International Reinhardsbrunn Symposium on Modern Fungicides and Antifungal Compounds, 2007 . Deutsche Phytomedizinische Gesellschaft, Braunschweig. pp. 121-127
Re-contructing evolution of fungicide resistance and disease dynamics of cereal pathogens from crop archives
C2 - Non-edited contributions to conferences
Fraaije, B. A. 2008. Re-contructing evolution of fungicide resistance and disease dynamics of cereal pathogens from crop archives.
Testing of fungicide activity enhancers using Septoria leaf blotch as model. Confidential report to industrial sponsor
D1 - Technical reports: non-confidential
Bean, T. P. and Fraaije, B. A. 2008. Testing of fungicide activity enhancers using Septoria leaf blotch as model. Confidential report to industrial sponsor.
Expression of genes encoding efflux proteins in Mycosphaerella graminicola isolates with sensitive or reduced triazole sensitivity phenotypes
C1 - Edited contributions to conferences/learned societies
Bean, T. P., Cools, H. J., Lucas, J. A. and Fraaije, B. A. 2008. Expression of genes encoding efflux proteins in Mycosphaerella graminicola isolates with sensitive or reduced triazole sensitivity phenotypes. Deising, H. B., Lyr, H., Russell, P. E., Kuck, K. H., Gisi, U. and Dehne, H. W. (ed.) Modern Fungicides and Antifungal Compounds V: Proceedings 15th International Reinhardsbrunn Symposium on Modern Fungicides and Antifungal Compounds, 2007 . Deutsche Phytomedizinische Gesellschaft, Braunschweig. pp. 93-99
Pathogenicity determinants of Fusarium graminearum on wheat ears
C2 - Non-edited contributions to conferences
Beacham, A. M., Urban, M., Antoniw, J. F. and Hammond-Kosack, K. E. 2008. Pathogenicity determinants of Fusarium graminearum on wheat ears. Abstracts BSPP Presidentail Meeting on Cereal Pathosystems, London, 16-17 December 2008 . pp. 11
Analysis of the newly sequenced Fusarium genomes using PHI-Base and ONDEX
C2 - Non-edited contributions to conferences
Beacham, A. M., Cavenet, C., Taubert, J., Urban, M., Antoniw, J. F., Rawlings, C. J. and Hammond-Kosack, K. E. 2008. Analysis of the newly sequenced Fusarium genomes using PHI-Base and ONDEX.
Pathogenicity determinants of Fusarium graminearum on wheat ears
C2 - Non-edited contributions to conferences
Beacham, A. M., Urban, M., Antoniw, J. F. and Hammond-Kosack, K. E. 2008. Pathogenicity determinants of Fusarium graminearum on wheat ears. Abstracts Syngenta Student Showcase, Jealott's Hill, 22 September 2008 .
Pathogenicity determinants of Fusarium graminearum on wheat ears
C2 - Non-edited contributions to conferences
Beacham, A. M., Antoniw, J. F., Urban, M. and Hammond-Kosack, K. E. 2008. Pathogenicity determinants of Fusarium graminearum on wheat ears. Asbtracts 9th European Conference on Fungal Genetics (ECFG9), Edinburgh, 5-8 April 2008 . pp. PR1.24
Fusarium graminearum kinome analysis and progress report. Confidential report to industrial sponsor
D1 - Technical reports: non-confidential
Antoniw, J. F., Urban, M. and Hammond-Kosack, K. E. 2008. Fusarium graminearum kinome analysis and progress report. Confidential report to industrial sponsor.
Reactive oxygen species-related genes in the wheat pathogen Mycosphaerella graminicola
C2 - Non-edited contributions to conferences
Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2008. Reactive oxygen species-related genes in the wheat pathogen Mycosphaerella graminicola. Abstracts BSPP Preseidential Meeting on Cereal Pathosystems, London, 16-17 December 2008 . pp. 9
Asymptomatic infection of winter and spring barley by Rhynchosporium secalis: effects and implications for epidemiology and host resistance
C2 - Non-edited contributions to conferences
Atkins, S. D., Stonard, J. F., Fraaije, B. A., Lucas, J. A., Fitt, B. D. L. and Newton, A. C. 2008. Asymptomatic infection of winter and spring barley by Rhynchosporium secalis: effects and implications for epidemiology and host resistance. Abstracts 10th International Barley Genetics Symposium (IBGS), Alexandria, 5-10 April 2008 .
The dynamics of Rynchosporium secalis in winter and spring barley and the role of inoculum sources
C2 - Non-edited contributions to conferences
Atkins, S. D., Fraaije, B. A., Lucas, J. A. and Fitt, B. D. L. 2008. The dynamics of Rynchosporium secalis in winter and spring barley and the role of inoculum sources.
Quantitative measurements of CYP51 alterations in populations of Mycosphaerella graminicola using pyrosequencing
C2 - Non-edited contributions to conferences
Motteram, J., Cools, H. J., Gilbert, S. and Fraaije, B. A. 2008. Quantitative measurements of CYP51 alterations in populations of Mycosphaerella graminicola using pyrosequencing.
Dispersal of airborne spores from plant pahtogenic fungi in cereals
C2 - Non-edited contributions to conferences
Havis, N., Fraaije, B. A. and Oxley, S. 2008. Dispersal of airborne spores from plant pahtogenic fungi in cereals.
Confidential report to Makhteshim Agan (UK) Ltd
D1 - Technical reports: non-confidential
Fraaije, B. A. 2008. Confidential report to Makhteshim Agan (UK) Ltd.
Demethylation inhibitor resistance in cereal pathogens and consequences of resistance management
C2 - Non-edited contributions to conferences
Fraaije, B. A., Cools, H. J., Motteram, J. and Lucas, J. A. 2008. Demethylation inhibitor resistance in cereal pathogens and consequences of resistance management.
Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola
C2 - Non-edited contributions to conferences
Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2008. Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola. Abstracts Molecular Biology of Plant Pathogens, Birnam, 17-19 September 2008 .
Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola
C2 - Non-edited contributions to conferences
Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2008. Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola. Abstracts Syngenta Student Showcase, Jealott's Hill, 16 September 2008 .
Characterisation of mechanisms correlated with reduced azole sensitivity in Mycosphaerella graminicola
C2 - Non-edited contributions to conferences
Cools, H. J., Fraaije, B. A., Bean, T. P. and Lucas, J. A. 2008. Characterisation of mechanisms correlated with reduced azole sensitivity in Mycosphaerella graminicola.
Impact of mutations in the CYP51 gene of Mycosphaerella graminicola on azole fungicide sensitivity and intrinsic protein function
C2 - Non-edited contributions to conferences
Cools, H. J., Fraaije, B. A., Fernandez-Ortuno, D., Bean, T. P. and Lucas, J. A. 2008. Impact of mutations in the CYP51 gene of Mycosphaerella graminicola on azole fungicide sensitivity and intrinsic protein function. Abstracts 7th International Mycosphaerella and Stagonospora Symposium, Ascona, 18-22 August 2008 .
Long-term dynamics in wheat of Phaeosphaeria nodorum and Mycosphaerella graminicola
C2 - Non-edited contributions to conferences
Shaw, M. W., Bearchell, S. J., Fitt, B. D. L. and Fraaije, B. A. 2008. Long-term dynamics in wheat of Phaeosphaeria nodorum and Mycosphaerella graminicola.
Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola
C2 - Non-edited contributions to conferences
Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2008. Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola. Abstracts 7th International Mycosphaerella and Stagonospora Symposium, Ascona, 18-22 August 2008 .
Controlling Septoria: can azole fungicides be relied upon?
G - Articles in popular magazines and other technical publications
Fraaije, B. A., Cools, H. J., Clark, B. and Lucas, J. A. 2008. Controlling Septoria: can azole fungicides be relied upon? RRA Newsletter. 26, p. 3.
Are azole fungicides losing ground against Septoria wheat disease? Resistance mechanisms in Mycosphaerella graminicola
A - Papers appearing in refereed journals
Cools, H. J. and Fraaije, B. A. 2008. Are azole fungicides losing ground against Septoria wheat disease? Resistance mechanisms in Mycosphaerella graminicola. Pest Management Science. 64 (7), pp. 681-684. https://doi.org/10.1002/ps.1568
Long-term relationships between environment and abundance of wheat of Phaeosphaeria nodorum and Mycosphaerella graminicola
A - Papers appearing in refereed journals
Shaw, M. W., Bearchell, S. J., Fitt, B. D. L. and Fraaije, B. A. 2008. Long-term relationships between environment and abundance of wheat of Phaeosphaeria nodorum and Mycosphaerella graminicola. New Phytologist. 177 (1), pp. 229-238. https://doi.org/10.1111/j.1469-8137.2007.02236.x
Molecular mechanisms associated with altered azole sensitivity in Mycosphaerella graminicola
C1 - Edited contributions to conferences/learned societies
Cools, H. J., Bean, T. P., Motteram, J., Gilbert, S. R. and Fraaije, B. A. 2007. Molecular mechanisms associated with altered azole sensitivity in Mycosphaerella graminicola. Proceedings 16th International Plant Protection Congress, Glasgow, 15-18 October 2007 . pp. 406-407
Specific resistance of wheat to Mycosphaerella graminicola operates to avoid MAPK activation and programmed cell death (PCD) associated with compatible interactions
C2 - Non-edited contributions to conferences
Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Specific resistance of wheat to Mycosphaerella graminicola operates to avoid MAPK activation and programmed cell death (PCD) associated with compatible interactions. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 .
New version of Descriptions of Plant Viruses
C2 - Non-edited contributions to conferences
Adams, M. J. and Antoniw, J. F. 2007. New version of Descriptions of Plant Viruses. Abstracts Advances in Virology, Greenwich, 11-12 September 2007 .
Phenotypic and metabolomic analyses of the Fusarium graminearum SNF1 mutant
C2 - Non-edited contributions to conferences
Urban, M., Antoniw, J. F., Allwood, W., Beacham, A., Ward, J. L., Beale, M. H. and Hammond-Kosack, K. E. 2007. Phenotypic and metabolomic analyses of the Fusarium graminearum SNF1 mutant. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 . pp. 212
Evolution of fungicide resistance in UK populations of Mycosphaerella graminicola
C2 - Non-edited contributions to conferences
Fraaije, B. A. 2007. Evolution of fungicide resistance in UK populations of Mycosphaerella graminicola. Abstracts Resistance 2007, Harpenden, 16-18 April 2007 .
A combinatorial pattern discovery approach for the prediction of membrane dipping (re-entrant) loops
A - Papers appearing in refereed journals
Lasso, G., Antoniw, J. F. and Mullins, J. G. L. 2007. A combinatorial pattern discovery approach for the prediction of membrane dipping (re-entrant) loops. Bioinformatics. 22, pp. e290-e297. https://doi.org/10.1093/bioinformatics/btl209
Grain fungus genome published
G - Articles in popular magazines and other technical publications
Antoniw, J. F., Baldwin, T., Urban, M. and Hammond-Kosack, K. E. 2007. Grain fungus genome published. EPSO News. No. 3.
Barley non-host interactions with Polymyxa species elicit a similar basal resistance response
C2 - Non-edited contributions to conferences
Mcgrann, G. R. D., Townsend, B. J., Antoniw, J. F., Asher, M. J. C. and Mutasa-Göttgens, E. S. 2007. Barley non-host interactions with Polymyxa species elicit a similar basal resistance response. Abstracts BSPP Presidential Meeting: Attack and Defence in Plant Disease, Bath, 12-14 September 2007 . pp. 67
Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat
C2 - Non-edited contributions to conferences
Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat. Abstracts Molecular Biology of Plant Pathogens (MBPP) Meeting, Bath, 10-11 September 2007 .
Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat
C2 - Non-edited contributions to conferences
Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat. Abstracts BSPP Presidential Meeting 2007: Attack and Defence in Plant Disease, Bath, 12-14 September 2007 . pp. 53
Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat
C2 - Non-edited contributions to conferences
Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat. Abstracts Syngenta Student Showcase, Jealott's Hill, September 2007 .
Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears
C2 - Non-edited contributions to conferences
Beacham, A., Antoniw, J. F., Urban, M. and Hammond-Kosack, K. E. 2007. Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears. Abstracts BSPP Presidential Meeting 2007: Attack and Defence in Plant Disease, Bath, 12-14 September 2007 .
Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears
C2 - Non-edited contributions to conferences
Beacham, A., Antoniw, J. F., Urban, M. and Hammond-Kosack, K. E. 2007. Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears. Abstracts Molecular Biology of Plant Pathogens (MBPP) Meeting, Bath, 10-11 September 2007 .
Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears
C2 - Non-edited contributions to conferences
Beacham, A., Antoniw, J. F., Urban, M. and Hammond-Kosack, K. E. 2007. Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears. Abstracts Syngenta Student Showcase, Jealott's Hill, September 2007 .
The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization
A - Papers appearing in refereed journals
Cuomo, C. A., Guldener, U., Xu, J-R., Trail, F., Turgeon, B. G., Di Pietro, A., Walton, J. D., Ma, L-J., Baker, S. E., Rep, M., Adam, G., Antoniw, J. F., Baldwin, T., Calvo, S., Chang, Y-L., Decaprio, D., Gale, L. R., Gnerre, S., Goswami, R. S., Hammond-Kosack, K. E., Harris, L. J., Hilburn, K., Kennell, J. C., Kroken, S., Magnuson, J. K., Mannhaupt, G., Mauceli, E., Mewes, H-W., Mitterbauer, R., Munsterkotter, M., Nelson, D., O'donnell, K., Ouellet, T., Qi, W., Quesneville, H., Roncero, M. I. G., Seong, K-Y., Tetko, I. V., Urban, M., Waalwijk, C., Ward, T. J., Yao, J., Birren, B. W. and Kistler, H. C. 2007. The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization. Science - AAAS. 317, pp. 1400-1402. https://doi.org/10.1126/science.1143708
Effects of a strobilurin-based spray programme on disease control, green leaf area, yield and development of fungicide-resistance in Mycosphaerella graminicola in Northern Ireland
A - Papers appearing in refereed journals
Mccartney, C., Mercer, P. C., Cooke, L. R. and Fraaije, B. A. 2007. Effects of a strobilurin-based spray programme on disease control, green leaf area, yield and development of fungicide-resistance in Mycosphaerella graminicola in Northern Ireland. Crop Protection. 26, pp. 1272-1280. https://doi.org/10.1016/j.cropro.2006.10.027
Transcriptome profiling of the response of Mycosphaerella graminicola isolates to an azole fungicide using cDNA microarrays
A - Papers appearing in refereed journals
Cools, H. J., Fraaije, B. A., Bean, T. P., Antoniw, J. F. and Lucas, J. A. 2007. Transcriptome profiling of the response of Mycosphaerella graminicola isolates to an azole fungicide using cDNA microarrays. Molecular Plant Pathology. 8 (5), pp. 639-651. https://doi.org/10.1111/J.1364-3703.2007.00411.X
Dynamics of fungicide resistant alleles in field populations of Mycosphaerella graminicola
C2 - Non-edited contributions to conferences
Fraaije, B. A. 2007. Dynamics of fungicide resistant alleles in field populations of Mycosphaerella graminicola.
Molecular mechanisms correlated with reduced azole sensitivity in Mycosphaerella graminicola
C2 - Non-edited contributions to conferences
Cools, H. J. 2007. Molecular mechanisms correlated with reduced azole sensitivity in Mycosphaerella graminicola.
Sterol content analysis of Mycosphaerella graminicola isolates with reduced sensitivity to triazole fungicides
C2 - Non-edited contributions to conferences
Bean, T. P., Cools, H. J., Fraaije, B. A. and Lucas, J. A. 2007. Sterol content analysis of Mycosphaerella graminicola isolates with reduced sensitivity to triazole fungicides.
Comparison of Leptosphaeria biglobosa- induced and chemically induced systemic resistance to L. maculans in Brassica napus
A - Papers appearing in refereed journals
Liu, S-Y., Liu, R-H., Latunde-Dada, A. O., Cools, H. J., Foster, S. J., Huang, Y-J. and Fitt, B. D. L. 2007. Comparison of Leptosphaeria biglobosa- induced and chemically induced systemic resistance to L. maculans in Brassica napus. Chinese Science Bulletin. 52, pp. 1053-1062. https://doi.org/10.1007/s11434-007-0181-5
A novel substitution 1381V in the sterol 14alpha-demethylase (CYP51) of Mycosphaerella graminicola is differentially selected by azole fungicides
A - Papers appearing in refereed journals
Fraaije, B. A., Cools, H. J., Kim, S-H., Motteram, J., Clark, W. S. and Lucas, J. A. 2007. A novel substitution 1381V in the sterol 14alpha-demethylase (CYP51) of Mycosphaerella graminicola is differentially selected by azole fungicides. Molecular Plant Pathology. 8 (3), pp. 245-254. https://doi.org/10.1111/j.1364-3703.2007.00388.X
Application of real-time and multiplex polymerase chain reaction assays to study leaf blotch epidemics in barley
A - Papers appearing in refereed journals
Fountaine, J. M., Shaw, M. W., Napier, B., Ward, E. and Fraaije, B. A. 2007. Application of real-time and multiplex polymerase chain reaction assays to study leaf blotch epidemics in barley. Phytopathology. 97, pp. 297-303. https://doi.org/10.1094/PHYTO-97-0297
Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat
C2 - Non-edited contributions to conferences
Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat. Abstracts 24th Fungal Genetics Conference, Asilomar, 20-25 March 2007 . pp. 152
Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host
A - Papers appearing in refereed journals
Keon, J. P. R., Antoniw, J. F., Carzaniga, R., Deller, S., Ward, J. L., Baker, J. M., Beale, M. H., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host. Molecular Plant-Microbe Interactions - MPMI. 20 (2), pp. 178-193. https://doi.org/10.1094/MPMI-20-2-0178
Effects of Strobilurin fungicides on control of Septoria tritici blotch, green leaf area and yield of winter wheat in the light of fungicide resistance in Northern Ireland
C1 - Edited contributions to conferences/learned societies
Mccartney, C., Mercer, P. C., Cooke, L. R. and Fraaije, B. A. 2006. Effects of Strobilurin fungicides on control of Septoria tritici blotch, green leaf area and yield of winter wheat in the light of fungicide resistance in Northern Ireland. Fungicide Resistance: Are We Wiining the Battle but Losing the War? Aspects of Applied Biology 78 . pp. 71
Methods to detect fungicide resistance: from broth dilution to real-time PCR
C1 - Edited contributions to conferences/learned societies
Fraaije, B. A. and Cools, H. J. 2006. Methods to detect fungicide resistance: from broth dilution to real-time PCR. Fungicide Resistance: Are We Winning the Battle but Losing the War? Aspects of Applied Biology 78 . pp. 11-15
DMI resistance: an overview
C2 - Non-edited contributions to conferences
Fraaije, B. A. 2006. DMI resistance: an overview. Abstracts 11th IUPAC International Congress of Pesticide Chemistry, Kobe, 6-11 August 2006 . pp. 60
Fungicide resistance management strategies, using barley mildew as a model
C1 - Edited contributions to conferences/learned societies
Burnett, F. J., Clark, W. S., Fraaije, B. A. and Lucas, J. A. 2006. Fungicide resistance management strategies, using barley mildew as a model. Fungicide Resistance: Are We Winning the Battle but Losing the War? Aspects of Applied Biology 78 . pp. 83-89
Integration of molecular diagnostics and air sampling to study plant pathogens
C2 - Non-edited contributions to conferences
West, J. S., Fraaije, B. A., Motteram, J., Rogers, S. L., Lacey, M. E. and Lucas, J. A. 2006. Integration of molecular diagnostics and air sampling to study plant pathogens. Abstracts 8th International Congress on Aerobiology, Neuchatel, 21-25 August 2006 . pp. 260
Prediction of transmembrane region adjacencies in membrane proteins
C2 - Non-edited contributions to conferences
Togawa, R. C., Antoniw, J. F. and Mullins, J. G. L. 2006. Prediction of transmembrane region adjacencies in membrane proteins. Abstracts 14th Annual Conference on Intelligent Systems for Molecular Biology (ISMB 2006), Fortaleza, Brazil, 6-10 August 2006 .
Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host
C2 - Non-edited contributions to conferences
Keon, J. P. R., Antoniw, J. F., Carzaniga, R., Deller, S., Ward, J. L., Baker, J. M., Beale, M. H., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host. Abstracts 3rd COGEME Interest Group Meeting, Manchester, 7-8 November 2006 .
The transcriptional changes of a hemibiotrophic fungal pathogen during successful adaptation to hypersensitive response-like programmed cell death of its plant host
C2 - Non-edited contributions to conferences
Keon, J. P. R., Antoniw, J. F., Carzaniga, R., Hammond-Kosack, K. E. and Rudd, J. J. 2006. The transcriptional changes of a hemibiotrophic fungal pathogen during successful adaptation to hypersensitive response-like programmed cell death of its plant host. Abstracts 8th European Conference on Fungal Genetics, Vienna, 8-11 April 2006 . pp. 351
Development and uptake of a scheme for predicting risk of severe light leaf spot on oilseed rape
G - Articles in popular magazines and other technical publications
Evans, N., Welham, S. J., Antoniw, J. F. and Fitt, B. D. L. 2006. Development and uptake of a scheme for predicting risk of severe light leaf spot on oilseed rape. Outlooks on Pest Management. 17 (6), pp. 243-245. https://doi.org/10.1564/17dec02
Transcriptome profiling of the response of Mycosphaerella graminicola isolates to triazole fungicides using cDNA microarrays
C2 - Non-edited contributions to conferences
Cools, H. J., Antoniw, J. F., Bean, T. P. and Fraaije, B. A. 2006. Transcriptome profiling of the response of Mycosphaerella graminicola isolates to triazole fungicides using cDNA microarrays. Abstracts 3rd COGEME Interest Group Meeting, Manchester, 7-8 November 2006 . pp. 28
Evolution of azole resistance mechanisms in UK populations of Mycosphaerella graminicola
C1 - Edited contributions to conferences/learned societies
Cools, H. J. and Fraaije, B. A. 2006. Evolution of azole resistance mechanisms in UK populations of Mycosphaerella graminicola. Fungicide Resistance: Are We Winning the Battle but Losing the War? Aspects of Applied Biology 78 . pp. 21-27
In planta expression analysis in Mycosphaerella graminicola of genes encoding efflux proteins
C2 - Non-edited contributions to conferences
Bean, T. P., Cools, H. J., Fraaije, B. A. and Lucas, J. A. 2006. In planta expression analysis in Mycosphaerella graminicola of genes encoding efflux proteins. Asbtracts APS CPS MSA Joint Meeting on Plant Pathology at the Biological Crossroads, Quebec, 29 July-2 August 2006 . pp. 11
Application of quantitative real-time PCR to monitor Rynchosporium secalis in barley cultivars
C2 - Non-edited contributions to conferences
Atkins, S. D., Fountaine, J. M., Fitt, B. D. L. and Fraaije, B. A. 2006. Application of quantitative real-time PCR to monitor Rynchosporium secalis in barley cultivars. Abstracts International Workshop on Barley Leaf Blights, Edmonton, 23-27 July 2006 .
Molecular genetics to identify genes involved in the pathogenicity of Fusarium graminearum on wheat ears
C2 - Non-edited contributions to conferences
Baldwin, T. K., Urban, M., Antoniw, J. F. and Hammond-Kosack, K. E. 2006. Molecular genetics to identify genes involved in the pathogenicity of Fusarium graminearum on wheat ears. Abstracts 9th International Fungal Biology Conference and 16th New Phytologist Symposium on Impact of Genomics on Fungal Biology, Nancy, 18-20 September 2006 . pp. 17-18
Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat
C2 - Non-edited contributions to conferences
Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat. Abstracts COGEME Interest Group Meeting, Manchester, 7-8 November 2006 .
Impact of changes in the target P450 CYP51 enzyme associated with altered triazole-sensitivity in fungal pathogens of cereal crops
A - Papers appearing in refereed journals
Cools, H. J., Fraaije, B. A., Kim, S. H. and Lucas, J. A. 2006. Impact of changes in the target P450 CYP51 enzyme associated with altered triazole-sensitivity in fungal pathogens of cereal crops. Biochemical Society Transactions. 34 (6), pp. 1219-1222. https://doi.org/10.1042/BST0341219
Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat
C2 - Non-edited contributions to conferences
Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat. Abstracts Molecular Biology of Plant Pathogens Meeting, Birnam, 18-20 September 2006 .
Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat
C2 - Non-edited contributions to conferences
Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat. Abstracts Annual Scientific Meeting of the British Mycological Society, Birmingham, 4-7 September 2006 . pp. 68
Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat
C2 - Non-edited contributions to conferences
Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat. Abstracts Syngenta Biology and Bioscience CASE PhD Open Day, Bracknell, 14 September 2006 .
Genome and EST analyses and expression of a gene family with putative functions in insect chemoreception
A - Papers appearing in refereed journals
Zhou, J-J., Kan, Y., Antoniw, J. F., Pickett, J. A. and Field, L. M. 2006. Genome and EST analyses and expression of a gene family with putative functions in insect chemoreception. Chemical Senses. 31, pp. 453-465. https://doi.org/10.1093/chemse/bjj050
Exploring appressorial formation in the cereal biotroph powdery mildew
C2 - Non-edited contributions to conferences
Gilbert, S. R., Fraaije, B. A., Bailey, A., Cools, H. J. and Lucas, J. A. 2006. Exploring appressorial formation in the cereal biotroph powdery mildew. Abstracts 8th European Conference on Fungal Genetics, Vienna, 8-11 April 2006 . pp. 165
Development and field testing of fungicide anti-resistance strategies, with particular reference to strobilurin QoI group of fungicides. (HGCA Project Report No. 392)
D1 - Technical reports: non-confidential
Fraaije, B. A., Burnett, F. J., Clark, W. S. and Lucas, J. A. 2006. Development and field testing of fungicide anti-resistance strategies, with particular reference to strobilurin QoI group of fungicides. (HGCA Project Report No. 392). Home Grown Cereals Authority (HGCA) London.
Light leaf spot risk reduced due to "dry" winter
G - Articles in popular magazines and other technical publications
Evans, N., Welham, S. J., Antoniw, J. F. and Fitt, B. D. L. 2006. Light leaf spot risk reduced due to "dry" winter. RRA Newsletter. No. 21, p. 1.
Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat
C2 - Non-edited contributions to conferences
Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat. Abstracts 8th European Conference on Fungal Genetics, Vienna, 8-11 April 2006 . pp. 355
DPVweb: a comprehensive database of plant and fungal virus genes and genomes
A - Papers appearing in refereed journals
Adams, M. J. and Antoniw, J. F. 2006. DPVweb: a comprehensive database of plant and fungal virus genes and genomes. Nucleic Acids Research. 34, pp. D382-D385. https://doi.org/10.1093/nar/gkj023
The transcription-associated proteins of Fusarium graminearum identified by sequence clustering and profile analyses
C2 - Non-edited contributions to conferences
Coulson, R., Urban, M., Antoniw, J. F. and Hammond-Kosack, K. E. 2005. The transcription-associated proteins of Fusarium graminearum identified by sequence clustering and profile analyses. Abstracts 23rd Fungal Genetics Conference, Asilomar, 15-20 March 2005 . pp. 113
Microarray transcription profiling provides insights into metabolic regulation and stress adaptation during infection of wheat by the Septoria leaf blotch pathogen, Mycosphaerella graminicola
C2 - Non-edited contributions to conferences
Rudd, J. J., Keon, J. P. R., Antoniw, J. F., Skinner, W., Hargreaves, J. A. and Hammond-Kosack, K. E. 2005. Microarray transcription profiling provides insights into metabolic regulation and stress adaptation during infection of wheat by the Septoria leaf blotch pathogen, Mycosphaerella graminicola. Abstracts 23rd Fungal Genetics Conference, Asilomar, 15-20 March 2005 . pp. 137
Testing an experimental fungicide for in vitro activity against Mycosphaerella graminicola (anamorph Septoria tritici ) (Confidential report for Cropsolution Inc)
D1 - Technical reports: non-confidential
Lucas, J. A., Bean, T., Cools, H. J. and Fraaije, B. A. 2005. Testing an experimental fungicide for in vitro activity against Mycosphaerella graminicola (anamorph Septoria tritici ) (Confidential report for Cropsolution Inc).
Exploring appressorial formation in the biotrophic cereal fungus powdery mildew
C2 - Non-edited contributions to conferences
Gilbert, S., Cools, H. J., Fraaije, B. A., Bailey, A. and Lucas, J. A. 2005. Exploring appressorial formation in the biotrophic cereal fungus powdery mildew. Abstracts 23rd Fungal Genetics Conference, Asilomar, 15-20 March 2005 . pp. 177
The role of ascospores in further spread of QoI-resistant cytochrome b alleles (G143A) in field populations of Mycosphaerella graminicola
A - Papers appearing in refereed journals
Fraaije, B. A., Cools, H. J., Fountaine, J., Lovell, D. J., Motteram, J., West, J. S. and Lucas, J. A. 2005. The role of ascospores in further spread of QoI-resistant cytochrome b alleles (G143A) in field populations of Mycosphaerella graminicola. Phytopathology. 95 (8), pp. 933-941. https://doi.org/10.1094/PHYTO-95-0933
QoI resistance in Mycosphaerella graminicola : role of inoculum, effect of different anti-resistance strategies and current status in the UK
C2 - Non-edited contributions to conferences
Fraaije, B. A., Burnett, F., Clark, W., Motteram, J. and Lucas, J. A. 2005. QoI resistance in Mycosphaerella graminicola : role of inoculum, effect of different anti-resistance strategies and current status in the UK. Abstracts American Phytopathological Society Annual Meeting, Austin, 30 July-3 August 2005 .
Resistance development to QoI inhibitors in populations of Mycosphaerella graminicola in the UK
C1 - Edited contributions to conferences/learned societies
Fraaije, B. A., Burnett, F. J., Clark, W. S., Motteram, J. and Lucas, J. A. 2005. Resistance development to QoI inhibitors in populations of Mycosphaerella graminicola in the UK. Dehne, H-W., Lyr, H., Russell, P. E., Kuck, K. H. and Gisi, U. (ed.) Modern Fungicides and Antifungal Compounds IV: Proceedings of the 14th International Reinhardsbrunn Symposium, Friedrichroda, 25-29 April 2004 . British Crop Protection Council (BCPC). pp. 63-71
Molecular examination of Septoria tritici isolates with reduced sensitivities to triazoles
C1 - Edited contributions to conferences/learned societies
Cools, H. J., Fraaije, B. A. and Lucas, J. A. 2005. Molecular examination of Septoria tritici isolates with reduced sensitivities to triazoles. Dehne, H-W., Lyr, H., Russell, P. E., Kuck, K. H. and Gisi, U. (ed.) Modern Fungicides and Antifungal Compounds IV: Proceedings of the 14th International Reinhardsbrunn Symposium, Friedrichroda, 25-29 April 2004 . British Crop Protection Council (BCPC). pp. 103-114
Molecular mechanisms correlated with changes in triazole sensitivity in isolates of Mycosphaerella graminicola
C1 - Edited contributions to conferences/learned societies
Cools, H. J., Fraaije, B. A. and Lucas, J. A. 2005. Molecular mechanisms correlated with changes in triazole sensitivity in isolates of Mycosphaerella graminicola. Proceedings BCPC International Congress - Crop Science and Technology, Glasgow, 31 October-2 November 2005 . pp. 267-274
Use of risk prediction models for integrated control of diseases of oilseed rape in the UK
C1 - Edited contributions to conferences/learned societies
Evans, N., Welham, S. J., Baierl, A., Antoniw, J. F., Papastamati, K., Van Den Bosch, F., Fitt, B. D. L., Gladders, P., Turner, J. A. and Elcock, S. 2005. Use of risk prediction models for integrated control of diseases of oilseed rape in the UK. Proceedings BCPC International Congress - Crop Science and Technology, Glasgow, 31 October-2 November 2005 . pp. 649-654
Physiological adaptation of a fungal plant pathogen to its host environment revealed through microarray transcription profiling
C2 - Non-edited contributions to conferences
Rudd, J. J., Keon, J. P. R., Antoniw, J. F., Skinner, W., Hargreaves, J. A. and Hammond-Kosack, K. E. 2005. Physiological adaptation of a fungal plant pathogen to its host environment revealed through microarray transcription profiling. Abstracts COGEME Interest Group Meeting, Manchester, 8-9 November 2005 .
Pattern recognition based prediction of ligand-specific function of membrane proteins irrespective of sequence similarity
C2 - Non-edited contributions to conferences
Lasso-Cabrera, G., Antoniw, J. F. and Mullins, J. 2005. Pattern recognition based prediction of ligand-specific function of membrane proteins irrespective of sequence similarity. Abstracts ECCB05: European Conference on Computational Biology, Madrid, 28 September-1 October 2005 . pp. 79
Using cDNA microarrays to profile the response of Mycosphaerella graminicola to triazole fungicides
C2 - Non-edited contributions to conferences
Cools, H. J., Fraaije, B. A., Keon, J. P. R., Antoniw, J. F. and Lucas, J. A. 2005. Using cDNA microarrays to profile the response of Mycosphaerella graminicola to triazole fungicides. Abstracts COGEME Interest Group Meeting, Manchester, 8-9 November 2005 .
Use of the DPV sequence database for high-throughput analyses of plant virus sequences for taxonomic and other purposes
C2 - Non-edited contributions to conferences
Adams, M. J. and Antoniw, J. F. 2005. Use of the DPV sequence database for high-throughput analyses of plant virus sequences for taxonomic and other purposes. Abstracts 13th International Congress of Virology: Microbes in a Changing World, San Francisco, 23-28 July 2005 .
Metabolic and stress adaptation by Mycosphaerella graminicola during sporulation in its host revealed through microarray transcription profiling
A - Papers appearing in refereed journals
Keon, J. P. R., Rudd, J. J., Antoniw, J. F., Skinner, W., Hargreaves, J. A. and Hammond-Kosack, K. E. 2005. Metabolic and stress adaptation by Mycosphaerella graminicola during sporulation in its host revealed through microarray transcription profiling. Molecular Plant Pathology. 6 (5), pp. 527-540. https://doi.org/10.1111/J.1364-3703.2005.00304.X
DPVweb: an open access internet resource on plant viruses and virus diseases
G - Articles in popular magazines and other technical publications
Adams, M. J. and Antoniw, J. F. 2005. DPVweb: an open access internet resource on plant viruses and virus diseases. Outlooks on Pest Management. 16, pp. 268-270.
Ascorbic acid deficiency activates cell death and disease resistance responses in Arabidopsis
A - Papers appearing in refereed journals
Pavet, V., Olmos, E., Kiddle, G., Mowla, S., Kumar, S., Antoniw, J. F., Alvarez, M. E. and Foyer, C. H. 2005. Ascorbic acid deficiency activates cell death and disease resistance responses in Arabidopsis. Plant Physiology. 139, pp. 1291-1303.
Membrane proteins in plant viruses
B - Book chapters etc edited externally
Adams, M. J. and Antoniw, J. F. 2005. Membrane proteins in plant viruses. in: Fischer, W. B. (ed.) Viral membrane proteins: structure, function and drug design Kluwer Academic Publishers, New York. pp. 3-19
Overview and analysis of the polyprotein cleavage sites in the family Potyviridae
A - Papers appearing in refereed journals
Adams, M. J., Antoniw, J. F. and Beaudoin, F. 2005. Overview and analysis of the polyprotein cleavage sites in the family Potyviridae. Molecular Plant Pathology. 6 (4), pp. 471-487. https://doi.org/10.1111/J.1364-3703.2005.00296.X
Integration of spore trapping with molecular techniques to enhance epidemiological studies
C2 - Non-edited contributions to conferences
West, J. S., McCartney, H. A., Fountaine, J., Fraaije, B. A., Lee, I. K. and Lucas, J. A. 2005. Integration of spore trapping with molecular techniques to enhance epidemiological studies. Abstracts 9th International Workshop on Plant Disease Epidemiology, Rennes, 10-15 April 2005 . pp. 65
Wheat archive links long-term fungal pathogen population dynamics to air pollution
A - Papers appearing in refereed journals
Bearchell, S. J., Fraaije, B. A., Shaw, M. W. and Fitt, B. D. L. 2005. Wheat archive links long-term fungal pathogen population dynamics to air pollution. Proceedings of the National Academy of Sciences. 102 (15), pp. 5438-5442. https://doi.org/10.1073/pnas.0501596102
Analysis of expressed sequence tags from the wheat leaf blotch pathogen Mycosphaerella graminicola (anamorph Septoria tritici)
A - Papers appearing in refereed journals
Keon, J. P. R., Antoniw, J. F., Rudd, J. J., Skinner, W., Hargreaves, J. A. and Hammond-Kosack, K. E. 2005. Analysis of expressed sequence tags from the wheat leaf blotch pathogen Mycosphaerella graminicola (anamorph Septoria tritici). Fungal Genetics and Biology. 42, pp. 376-389. https://doi.org/10.1016/j.fgb.2004.12.005
Strobilurin resistance in Septoria tritici in the UK. (HGCA topic sheet No. 69)
G - Articles in popular magazines and other technical publications
Clark, W. and Fraaije, B. A. 2005. Strobilurin resistance in Septoria tritici in the UK. (HGCA topic sheet No. 69).
Molecular criteria for genus and species discrimination within the family Potyviridae
A - Papers appearing in refereed journals
Adams, M. J., Antoniw, J. F. and Fauquet, C. M. 2005. Molecular criteria for genus and species discrimination within the family Potyviridae. Archives of Virology. 150 (3), pp. 459-479. https://doi.org/10.1007/s00705-004-0440-6
A new potyvirus from tuberose (Polianthes tuberosa) in China
A - Papers appearing in refereed journals
Lin, L., Zheng, H-Y., Chen, J., Chen, J-P., Zhang, Q-Y., Zhao, M-F., Antoniw, J. F. and Adams, M. 2004. A new potyvirus from tuberose (Polianthes tuberosa) in China. Archives of Virology. 149, pp. 1107-1116. https://doi.org/10.1007/s00705-003-0289-0
Leptosphaeria biglobosa can induce higher resistance of Brassica napus to Phoma stem canker by triggering earlier JA/ET pathway and stronger SA pathway both locally and systematically
C2 - Non-edited contributions to conferences
Liu, R., Liu, S., Fitt, B. D. L., Cools, H. J., Latunde-Dada, A. O., Huang, Y-J., Li, Z. and Lucas, J. A. 2004. Leptosphaeria biglobosa can induce higher resistance of Brassica napus to Phoma stem canker by triggering earlier JA/ET pathway and stronger SA pathway both locally and systematically. Abstracts Discovery, Development and Delivery in Plant Pathology: 7th Conference of the European Foundation for Plant Pathology and BSPP Presidential Meeting 2004, Aberdeen, 5-10 September 2004 . pp. 38
Development of the oilseed rape light leaf spot forecast: from model to mobile phone
A - Papers appearing in refereed journals
Evans, N., Welham, S. J., Baierl, A., Antoniw, J. F. and Fitt, B. D. L. 2004. Development of the oilseed rape light leaf spot forecast: from model to mobile phone. Aspects of Applied Biology. 72, pp. 67-74.
Molecular mechanisms conferring reduced sensitivities to triazoles in UK isolates of Septoria tritici
C2 - Non-edited contributions to conferences
Cools, H. J., Fraaije, B. A. and Lucas, J. A. 2004. Molecular mechanisms conferring reduced sensitivities to triazoles in UK isolates of Septoria tritici.
Evolution of QoI resistance in populations of Mycosphaerella graminocola
C2 - Non-edited contributions to conferences
Fraaije, B. A. and Lucas, J. A. 2004. Evolution of QoI resistance in populations of Mycosphaerella graminocola.
Plant pathogens: how can molecular genetic information on plant pathogens assist in breeding disease resistant crops
C1 - Edited contributions to conferences/learned societies
Hammond-Kosack, K. E., Urban, M., Baldwin, T., Daudi, A., Rudd, J. J., Keon, J., Lucas, J. A., Magiure, K., Kornyukhin, D., Jing, H-C., Bass, C. G. and Antoniw, J. F. 2004. Plant pathogens: how can molecular genetic information on plant pathogens assist in breeding disease resistant crops. Fischer, T. (ed.) New Directions for a Diverse Planet: Proceedings 4th International Crop Science Congress, Brisbane, 26 September-1 October 2004 . Regional Institute, Gosford. pp. www.cropscience.org.au
Plant pathogen diagnostics: immunological and nucleic acid-based approaches
A - Papers appearing in refereed journals
Ward, E., Foster, S. J., Fraaije, B. A. and McCartney, H. A. 2004. Plant pathogen diagnostics: immunological and nucleic acid-based approaches. Annals of Applied Biology - AAB. 145 (1), pp. 1-16. https://doi.org/10.1111/j.1744-7348.2004.tb00354.x
A new potyvirus for tuberose (Polianthes tuberosa) in China
A - Papers appearing in refereed journals
Lin, L., Zheng, H-Y., Chen, J., Chen, J-P., Zhang, Q-Y., Zhao, M-F., Antoniw, J. F. and Adams, M. J. 2004. A new potyvirus for tuberose (Polianthes tuberosa) in China. Archives of Virology. 149, pp. 1107-1116.
The new plant virus family Flexiviridae and assessment of molecular criteria for species demarcation
A - Papers appearing in refereed journals
Adams, M. J., Antoniw, J. F., Bar-Joseph, M., Brunt, A. A., Candresse, T., Foster, G. D., Martelli, G. P., Milne, R. G. and Fauquet, C. M. 2004. The new plant virus family Flexiviridae and assessment of molecular criteria for species demarcation. Archives of Virology. 149, pp. 1045-1060.
A virus related to Soybean mosaic virus from Pinellia ternata in China and its comparison with local soybean SMV isolates
A - Papers appearing in refereed journals
Chen, J., Zheng, H-Y., Lin, L., Adams, M. J., Antoniw, J. F., Zhao, M-F., Shang, Y-F. and Chen, J-P. 2004. A virus related to Soybean mosaic virus from Pinellia ternata in China and its comparison with local soybean SMV isolates. Archives of Virology. 149, pp. 349-363.
Detection and classification of allexiviruses from garlic in China
A - Papers appearing in refereed journals
Chen, J., Zheng, H-Y., Antoniw, J. F., Adams, M. J., Chen, J-P. and Lin, L. 2004. Detection and classification of allexiviruses from garlic in China. Archives of Virology. 149, pp. 435-445.
Peduncle rot of dwarf wheat caused by Rhizoctonia cerealis
G - Articles in popular magazines and other technical publications
Lovell, D. J., Parker, S. R., Baldwin, S. and Fraaije, B. A. 2003. Peduncle rot of dwarf wheat caused by Rhizoctonia cerealis. Plant Health Progress. July 2003, p. http://www.plantmanagementnetwork.org/.
QoI resistance development in populations of cereal pathogens in the UK
C1 - Edited contributions to conferences/learned societies
Fraaije, B. A., Lucas, J. A., Clark, W. S. and Burnett, F. J. 2003. QoI resistance development in populations of cereal pathogens in the UK. Proceedings BCPC International Congress - Crop Science and Technology, Glasgow, 10-12 November 2003 . pp. 689-694
Menadione sodium bisulphite: a novel plant defence activator which enhances local and systemic resistance to infection by Leptosphaeria maculans in oilseed rape
A - Papers appearing in refereed journals
Borges, A. A., Cools, H. J. and Lucas, J. A. 2003. Menadione sodium bisulphite: a novel plant defence activator which enhances local and systemic resistance to infection by Leptosphaeria maculans in oilseed rape. Plant Pathology. 52 (4), pp. 429-436. https://doi.org/10.1046/j.1365-3059.2003.00877.x
Vitamin C contents modulate genes involved in plant defense and development
C2 - Non-edited contributions to conferences
Kiddle, G., Pastori, G. M., Antoniw, J. F., Bernard, S., Veljovic-Jovanovic, S., Verrier, P. J., Noctor, G. and Foyer, C. H. 2003. Vitamin C contents modulate genes involved in plant defense and development.
Codon usage bias amongst plant viruses
A - Papers appearing in refereed journals
Adams, M. J. and Antoniw, J. F. 2003. Codon usage bias amongst plant viruses. Archives of Virology. 149 (1), pp. 113-135. https://doi.org/10.1007/s00705-003-0186-6
A database and web site for plant virus sequence analysis
C1 - Edited contributions to conferences/learned societies
Adams, M. J. and Antoniw, J. F. 2003. A database and web site for plant virus sequence analysis. Rush, C. M. and Merz, U. (ed.) Proceedings 5th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Zurich, 22-25 July 2002 . American Society of Sugar Beet Technologists, Denver. pp. 25-28
Occurrence and sequences of Lily mottle virus and Lily symptomless virus in plants grown from imported bulbs in Zhejiang province, China. Brief report
A - Papers appearing in refereed journals
Zheng, H-Y., Chen, J., Zhao, M-F., Lin, L., Chen, J-P., Antoniw, J. F. and Adams, M. J. 2003. Occurrence and sequences of Lily mottle virus and Lily symptomless virus in plants grown from imported bulbs in Zhejiang province, China. Brief report. Archives of Virology. 148, pp. 2419-2428.
Interactive forecasting of light leaf spot (Pyrenopeziza brassicae ) risk for winter oilseed rape on the internet
C1 - Edited contributions to conferences/learned societies
Evans, N., Steed, J. M., Welham, S. J., Antoniw, J. F., Baierl, A., Turner, J. A., Gladders, P. and Fitt, B. D. L. 2003. Interactive forecasting of light leaf spot (Pyrenopeziza brassicae ) risk for winter oilseed rape on the internet. Proceedings 11th International Rapeseed Congress, Copenhagen, 6-10 July 2003 . pp. 1067-1069
The role of antioxidant-mediated signal transduction during stress
C2 - Non-edited contributions to conferences
Foyer, C. H., Kiddle, G., Antoniw, J. F., Bernard, S. M., Verrier, P. J., Pastori, G. M. and Noctor, G. 2003. The role of antioxidant-mediated signal transduction during stress. Abstracts Keystone Meeting on Plant Biology: Functions and Control of Cell Death, Snowbird, Utah, 10-15 April 2003 .
Vitamin C contents modulate genes involved in plant defense and development
C2 - Non-edited contributions to conferences
Kiddle, G., Pastori, G. M., Antoniw, J. F., Bernard, S., Veljovic-Jovanovic, S., Verrier, P. J., Noctor, G. and Foyer, C. H. 2003. Vitamin C contents modulate genes involved in plant defense and development. Abstracts Keystone Meeting on Plant Biology: Functions and Control of Cell Death, Snowbird, Utah, 10-15 April 2003 .
Leaf vitamin C contents modulate plant defense transcripts and regulate genes that control development through hormone signaling
A - Papers appearing in refereed journals
Pastori, G. M., Kiddle, G., Antoniw, J. F., Bernard, S. M., Veljovic-Jovanovic, S., Verrier, P. J., Noctor, G. and Foyer, C. H. 2003. Leaf vitamin C contents modulate plant defense transcripts and regulate genes that control development through hormone signaling. The Plant Cell. 15 (4), pp. 939-951. https://doi.org/10.1105/tpc.010538
Effects of leaf ascorbate content on defense and photosynthesis gene expression in Arabidopsis thaliana
A - Papers appearing in refereed journals
Kiddle, G., Pastori, G. M., Bernard, S. M., Pignocchi, C., Antoniw, J. F., Verrier, P. J. and Foyer, C. H. 2003. Effects of leaf ascorbate content on defense and photosynthesis gene expression in Arabidopsis thaliana. Antioxidants and Redox Signaling. 5, pp. 23-32.
Molecular diagnostics for fungal plant pathogens
A - Papers appearing in refereed journals
McCartney, H. A., Foster, S. J., Fraaije, B. A. and Ward, E. 2003. Molecular diagnostics for fungal plant pathogens. Pest Management Science. 59 (2), pp. 129-142. https://doi.org/10.1002/ps.575
Resistance in wheat powdery mildew to strobilurin fungicides: effects of dose rate, frequency and mixtures (Final report to Defra on project PT0226)
D1 - Technical reports: non-confidential
Fraaije, B. A. 2002. Resistance in wheat powdery mildew to strobilurin fungicides: effects of dose rate, frequency and mixtures (Final report to Defra on project PT0226).
Vitamin C contents modulate defense processes and plant development
C2 - Non-edited contributions to conferences
Foyer, C. H., Kiddle, G., Pastori, G. M., Antoniw, J. F., Bernard, S., Veljovic-Jovanovic, S., Verrier, P. J. and Noctor, G. 2002. Vitamin C contents modulate defense processes and plant development. Abstracts 13th Congress of the Federation of European Societies of Plant Physiology, Heraklion, 1-6 September 2002 . pp. 196
Septoria epidemics on wheat: combined use of visual assessment and PCR-based diagnostics to identify mechanisms of disease escape
C1 - Edited contributions to conferences/learned societies
Fraaije, B. A., Lovell, D. J. and Baldwin, S. 2002. Septoria epidemics on wheat: combined use of visual assessment and PCR-based diagnostics to identify mechanisms of disease escape.
A cullin gene is induced in tomato roots forming arbuscular mycorrhizae
A - Papers appearing in refereed journals
Tahiri-Alaoui, A., Lingua, G., Avrova, A., Sampo, S., Fusconi, A., Antoniw, J. F. and Berta, G. 2002. A cullin gene is induced in tomato roots forming arbuscular mycorrhizae. Canadian Journal Of Botany. 80, pp. 607-616.
Following the dynamics of strobilurin resistance in Blumeria graminis f.sp. tritici using quantitative allele-specific real-time PCR measurements with the fluorescent dye SYBR Green 1
A - Papers appearing in refereed journals
Fraaije, B. A., Butters, J. A., Coelho, J. M., Jones, D. R. and Hollomon, D. W. 2002. Following the dynamics of strobilurin resistance in Blumeria graminis f.sp. tritici using quantitative allele-specific real-time PCR measurements with the fluorescent dye SYBR Green 1. Plant Pathology. 51 (1), pp. 45-54. https://doi.org/10.1046/j.0032-0862.2001.00650.x
Pre-treatment of cucumber plants with acibenzolar-S-methyl systemically primes a phenylalanine ammonia lyase gene (PAL1 ) for enhanced expression upon attack with a pathogenic fungus
A - Papers appearing in refereed journals
Cools, H. J. and Ishii, H. 2002. Pre-treatment of cucumber plants with acibenzolar-S-methyl systemically primes a phenylalanine ammonia lyase gene (PAL1 ) for enhanced expression upon attack with a pathogenic fungus. Physiological and Molecular Plant Pathology. 61, pp. 273-280.
Interactive forecasting on the Internet of light leaf spot (Pyrenopeziza brassicae ) risk for winter oilseed rape
C1 - Edited contributions to conferences/learned societies
Evans, N., Steed, J. M., Welham, S. J., Antoniw, J. F., Turner, J. A., Gladders, P. and Fitt, B. D. L. 2002. Interactive forecasting on the Internet of light leaf spot (Pyrenopeziza brassicae ) risk for winter oilseed rape.
Vitamin C contents modulate defence and plant development via transcriptional regulation
C2 - Non-edited contributions to conferences
Foyer, C. H., Pastori, G. M., Kiddle, G., Antoniw, J. F., Bernard, S., Veljovic-Jovanovic, S., Noctor, G. and Verrier, P. J. 2002. Vitamin C contents modulate defence and plant development via transcriptional regulation.
Cloning and sequence analysis of the eburicol 14alpha-demethylase encoding gene (CYP51 ) from the Japanese pear scab fungus Venturia nashicola
A - Papers appearing in refereed journals
Cools, H. J., Ishii, H., Butters, J. A. and Hollomon, D. W. 2002. Cloning and sequence analysis of the eburicol 14alpha-demethylase encoding gene (CYP51 ) from the Japanese pear scab fungus Venturia nashicola. Journal of Phytopathology. 150 (42986), pp. 444-450. https://doi.org/10.1046/j.1439-0434.2002.00776.x
Quantitative PCR monitoring of the effect of azoxystrobin treatments on Mycosphaerella graminicola epidemics in the field
A - Papers appearing in refereed journals
Rohel, E. A., Laurent, P., Fraaije, B. A., Cavelier, N. and Hollomon, D. W. 2002. Quantitative PCR monitoring of the effect of azoxystrobin treatments on Mycosphaerella graminicola epidemics in the field. Pest Management Science. 58 (3), pp. 248-254. https://doi.org/10.1002/ps.431
Alphacryptovirus: Partitiviridae
G - Articles in popular magazines and other technical publications
Antoniw, J. F. 2001. Alphacryptovirus: Partitiviridae.
TMCompare: transmembrane region sequence and structure
A - Papers appearing in refereed journals
Togawa, R. C., Antoniw, J. F. and Mullins, J. G. L. 2001. TMCompare: transmembrane region sequence and structure. Bioinformatics. 17, pp. 1238-1239. https://doi.org/10.1093/bioinformatics/17.12.1238
Occurrence and molecular characterization of strobilurin resistance in cucumber powdery mildew and downy mildew
A - Papers appearing in refereed journals
Ishii, H., Fraaije, B. A., Sugiyama, T., Noguchi, K., Nishimura, K., Takeda, T., Amano, T. and Hollomon, D. W. 2001. Occurrence and molecular characterization of strobilurin resistance in cucumber powdery mildew and downy mildew. Phytopathology. 91, pp. 1166-1171. https://doi.org/https://doi.org/10.1094/PHYTO.2001.91.12.1166
PCR-based assays to assess wheat varietal resistance to blotch (Septoria tritici and Stagonospora nododrum ) and rust (Puccinia striiformis and Puccinia recondita) diseases
A - Papers appearing in refereed journals
Fraaije, B. A., Lovell, D. J., Coelho, J. M., Baldwin, S. and Hollomon, D. W. 2001. PCR-based assays to assess wheat varietal resistance to blotch (Septoria tritici and Stagonospora nododrum ) and rust (Puccinia striiformis and Puccinia recondita) diseases. European Journal of Plant Pathology. 107, pp. 905-917. https://doi.org/10.1023/A:1013119206261
Plant virus transmission by plasmodiophorid fungi is associated with distinctive transmembrane regions of virus-encoded proteins
A - Papers appearing in refereed journals
Adams, M. J., Antoniw, J. F. and Mullins, J. G. L. 2001. Plant virus transmission by plasmodiophorid fungi is associated with distinctive transmembrane regions of virus-encoded proteins. Archives of Virology. 146 (6), pp. 1139-1153. https://doi.org/10.1007/s007050170111
Exploring infection of wheat and carbohydrate metabolism in Mycosphaerella graminocola transformants with differentially regulated green fluorescent protein expression
A - Papers appearing in refereed journals
Rohel, E. A., Payne, A. C., Fraaije, B. A. and Hollomon, D. W. 2001. Exploring infection of wheat and carbohydrate metabolism in Mycosphaerella graminocola transformants with differentially regulated green fluorescent protein expression. Molecular Plant-Microbe Interactions - MPMI. 14 (2), pp. 156-163. https://doi.org/10.1094/MPMI.2001.14.2.156
Novel DNA diagnostic technology in plant disease control using Septoria tritici as a model. (HGCA Project Report No. 245)
D1 - Technical reports: non-confidential
Fraaije, B. A. and Hollomon, D. W. 2001. Novel DNA diagnostic technology in plant disease control using Septoria tritici as a model. (HGCA Project Report No. 245). Home Grown Cereals Authority (HGCA) London.
In planta genotyping of Erysiphe graminis f. sp. tritici isolates for strobilurin-resistance using a fluorometric allele-specific PCR assay
C1 - Edited contributions to conferences/learned societies
Fraaije, B. A., Butters, J. A. and Hollomon, D. W. 2000. In planta genotyping of Erysiphe graminis f. sp. tritici isolates for strobilurin-resistance using a fluorometric allele-specific PCR assay. Proceedings AFPP 6th International Conference on Plant Diseases, Tours, 6-8 December 2000 . pp. 779-786
In planta genotyping of Erysiphe graminis f. sp. tritici isolates for strobilurin-resistance using a fluorometric allele-specific PCR assay
C1 - Edited contributions to conferences/learned societies
Fraaije, B. A., Butters, J. A. and Hollomon, D. W. 2000. In planta genotyping of Erysiphe graminis f. sp. tritici isolates for strobilurin-resistance using a fluorometric allele-specific PCR assay. Proceedings Brighton Crop Protection Conference - Pests and Diseases, 2000 . pp. 401-406
Introducing an interactive Internet based forecasting system for light leaf spot of winter oilseed rape in the UK
G - Articles in popular magazines and other technical publications
Evans, N., Antoniw, J. F., Fitt, B. D. L., Gladders, P. and Welham, S. J. 2000. Introducing an interactive Internet based forecasting system for light leaf spot of winter oilseed rape in the UK. GCIRC Bulletin. 17, pp. 48-52.
Conservation of functional site structure across different membrane transport protein families
A - Papers appearing in refereed journals
Mullins, J. G. L., Knight, G. L., Sarakinou, K. S. and Antoniw, J. F. 2000. Conservation of functional site structure across different membrane transport protein families. Biochemical Society Transactions. 28 (1), p. A40.
The ileal active bile acid transport protein works bi-directionally: evidence that it is structurally evolved for two distinct functions
A - Papers appearing in refereed journals
Knight, G. L., Antoniw, J. F., Sarakinou, K. S. and Mullins, J. G. L. 2000. The ileal active bile acid transport protein works bi-directionally: evidence that it is structurally evolved for two distinct functions. Biochemical Society Transactions. 28 (1), p. A42.
Forecasting light leaf spot (Pyrenopeziza brassicae ) of winter oilseed rape (Brassica napus ) on the Internet
A - Papers appearing in refereed journals
Souter, S. D., Castells-Brooke, N. I. D., Antoniw, J. F., Welham, S. J., Fitt, B. D. L., Evans, N., Gladders, P., Turner, J. A. and Sutherland, K. 1999. Forecasting light leaf spot (Pyrenopeziza brassicae ) of winter oilseed rape (Brassica napus ) on the Internet. Aspects of Applied Biology. 55, pp. 37-42.
Molecular analysis of barley yellow mosaic virus isolates from China
A - Papers appearing in refereed journals
Chen, J., Shi, N., Cheng, Y., Diao, A., Wilson, T. M. A., Antoniw, J. F. and Adams, M. J. 1999. Molecular analysis of barley yellow mosaic virus isolates from China. Virus Research. 64, pp. 13-21. https://doi.org/10.1016/s0168-1702(99)00076-3
A two-step multiplex RT-PCR method for simultaneous detection of soil-borne wheat mosaic virus and wheat spindle streak mosaic virus from France
A - Papers appearing in refereed journals
Gitton, F., Diao, A., Ducrot, O., Antoniw, J. F., Adams, M. J. and Maraite, H. 1999. A two-step multiplex RT-PCR method for simultaneous detection of soil-borne wheat mosaic virus and wheat spindle streak mosaic virus from France. Plant Pathology. 48 (5), pp. 635-641.
Molecular comparisons amongst wheat bymovirus isolates from Asia, North America and Europe
A - Papers appearing in refereed journals
Chen, J., Sohn, A., Chen, J-P., Lei, J., Cheng, Y., Schulze, S., Steinbiss, H-H., Antoniw, J. F. and Adams, M. J. 1999. Molecular comparisons amongst wheat bymovirus isolates from Asia, North America and Europe. Plant Pathology. 48 (5), pp. 642-647. https://doi.org/10.1046/j.1365-3059.1999.00392.x
The Molecular Biology Notebook (CD-ROM)
J - Computer programs
Antoniw, J. F., Castells-Brooke, N. I. D., Moore, W. J. and Verrier, P. J. 1999. The Molecular Biology Notebook (CD-ROM). Association of Applied Biologists, Wellesbourne.
The Molecular Biology Notebook on CD-ROM - a step toward the virtual laboratory
G - Articles in popular magazines and other technical publications
Castells-Brooke, N. I. D., Mullins, R., Antoniw, J. F. and Verrier, P. J. 1999. The Molecular Biology Notebook on CD-ROM - a step toward the virtual laboratory. Journal Of Biological Education. 33 (4), pp. 223-225. https://doi.org/10.1080/00219266.1999.9655672
The occurrence of barley mild mosaic virus (BaMMV) in China and the nucleotide sequence of its coat protein gene
A - Papers appearing in refereed journals
Zheng, T., Cheng, Y., Chen, J. P., Antoniw, J. F. and Adams, M. J. 1999. The occurrence of barley mild mosaic virus (BaMMV) in China and the nucleotide sequence of its coat protein gene. Journal of Phytopathology. 147 (4), pp. 229-234. https://doi.org/10.1046/j.1439-0434.1999.147004229.x
Characterisation and partial sequence of a new furovirus of wheat in China
A - Papers appearing in refereed journals
Ye, R., Zheng, T., Chen, J., Diao, A., Adams, M. J., Yu, S. and Antoniw, J. F. 1999. Characterisation and partial sequence of a new furovirus of wheat in China. Plant Pathology. 48 (3), pp. 379-387. https://doi.org/10.1046/j.1365-3059.1999.00358.x
Sequences of European wheat mosaic virus and oat golden stripe virus and genome analysis of the genus Furovirus
A - Papers appearing in refereed journals
Diao, A., Chen, J., Gitton, F., Antoniw, J. F., Mullins, J., Hall, A. M. and Adams, M. J. 1999. Sequences of European wheat mosaic virus and oat golden stripe virus and genome analysis of the genus Furovirus. Virology. 261 (2), pp. 331-339. https://doi.org/10.1006/viro.1999.9880
Complete sequence and genome properties of Chinese wheat mosaic virus, a new furovirus from China
A - Papers appearing in refereed journals
Diao, A., Chen, J., Ye, R., Zheng, T., Yu, S., Antoniw, J. F. and Adams, M. J. 1999. Complete sequence and genome properties of Chinese wheat mosaic virus, a new furovirus from China. Journal of General Virology. 80 (5), pp. 1141-1145. https://doi.org/10.1099/0022-1317-80-5-1141
Data on plant viruses: a new CD-ROM resource
C2 - Non-edited contributions to conferences
Adams, M. J., Antoniw, J. F., Barker, H., Robinson, D., Jones, A. T. and Murant, A. F. 1998. Data on plant viruses: a new CD-ROM resource. Abstracts ICPP98 7th International Congress of Plant Pathology, Edinburgh, 9-16 August 1998 . pp. 4.3.6
Descriptions of plant viruses on CD-ROM
G - Articles in popular magazines and other technical publications
Adams, M. J., Antoniw, J. F., Barker, H., Jones, A. T., Murant, A. F. and Robinson, D. 1998. Descriptions of plant viruses on CD-ROM.
Applications of PCR in fungal-plant interactions
B - Book chapters etc edited externally
Ward, E., Tahiri-Alaoui, A. and Antoniw, J. F. 1998. Applications of PCR in fungal-plant interactions. in: Arora, D. K., Elander, R. P., Reddy, C. A. and Bridge, P. D. (ed.) Applications of PCR in mycology Wallingford, Oxon CAB International (CABI). pp. 289-307
A large duplication in the 3'-untranslated region of a subpopulation of RNA2 of the UK-M isolate of barley mild mosaic bymovirus
A - Papers appearing in refereed journals
Peerenboom, E., Jacobi, V., Cartwright, E. J., Adams, M. J., Steinbiss, H-H. and Antoniw, J. F. 1997. A large duplication in the 3'-untranslated region of a subpopulation of RNA2 of the UK-M isolate of barley mild mosaic bymovirus. Virus Research. 47, pp. 1-6. https://doi.org/10.1016/s0168-1702(96)01388-3
Complete RNA1 sequences of two UK isolates of barley mild mosaic virus: a wild-type fungus-transmissible isolate and a non-fungus-transmissible derivative
A - Papers appearing in refereed journals
Peerenboom, E., Cartwright, E. J., Foulds, I., Adams, M. J., Stratford, R., Rosner, A., Steinbiss, H-H. and Antoniw, J. F. 1997. Complete RNA1 sequences of two UK isolates of barley mild mosaic virus: a wild-type fungus-transmissible isolate and a non-fungus-transmissible derivative. Virus Research. 50, pp. 175-183. https://doi.org/10.1016/s0168-1702(97)00069-5
Accumulation of a novel PR1 protein of Nicotiana langsdorfii leaves in response to virus infection or treatment with salicylic acid
A - Papers appearing in refereed journals
Gordon-Weeks, R., Sugars, J. M., Antoniw, J. F. and White, R. F. 1997. Accumulation of a novel PR1 protein of Nicotiana langsdorfii leaves in response to virus infection or treatment with salicylic acid. Physiological and Molecular Plant Pathology. 50, pp. 263-273. https://doi.org/10.1006/pmpp.1997.0085
Strain differences between isolates of barley yellow mosaic virus in China
C1 - Edited contributions to conferences/learned societies
Shi, N., Chen, J., Adams, M. J., Zhu, F., Wang, Z., Wilson, T. M. A., Macfarlane, S. A. and Antoniw, J. F. 1997. Strain differences between isolates of barley yellow mosaic virus in China. Sherwood, J. L. and Rush, C. M. (ed.) Proceedings 3rd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Dundee, 6-7 August 1996 . American Society of Sugar Beet Technologists, Denver. pp. 41-44
Characterisation of UK isolates of barley yellow mosaic virus
C1 - Edited contributions to conferences/learned societies
Shi, N., Adams, M. J., Chen, J., Wilson, T. M. A., Macfarlane, S. A. and Antoniw, J. F. 1997. Characterisation of UK isolates of barley yellow mosaic virus. Sherwood, J. L. and Rush, C. M. (ed.) Proceedings 3rd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Dundee, 6-7 August, 1996 . American Society of Sugar Beet Technologists, Denver. pp. 37-40
The suppression of mannitol induced pathogenesis-related protein accumulation in tobacco by antibiotics
A - Papers appearing in refereed journals
White, R. F., Reynolds, H. C., Sugars, J. M. and Antoniw, J. F. 1996. The suppression of mannitol induced pathogenesis-related protein accumulation in tobacco by antibiotics. Physiological and Molecular Plant Pathology. 49, pp. 389-393.
A plant virus notebook for IBM-compatible computers
C1 - Edited contributions to conferences/learned societies
Antoniw, J. F., Cartwright, E. and Adams, M. J. 1996. A plant virus notebook for IBM-compatible computers. Sherwood, J. L. and Rush, C. M. (ed.) Proceedings 3rd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Dundee, 6-7 August 1996 . American Society of Sugar Beet Technologists, Denver. pp. 189-192
Strand-specific RT-PCR detects replication of BaYMV and BaMMV in leaves and roots
C1 - Edited contributions to conferences/learned societies
Peerenboom, E., Antoniw, J. F., Adams, M. J. and Steinbiss, H-H. 1996. Strand-specific RT-PCR detects replication of BaYMV and BaMMV in leaves and roots. Sherwood, J. L. and Rush, C. M. (ed.) Proceedings 3rd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Dundee, 6-7 August 1996 . American Society of Sugar Beet Technologists, Denver. pp. 181-183
Barley mild mosaic virus: deletions, duplications and transmission
C1 - Edited contributions to conferences/learned societies
Cartwright, E. J., Rosner, A., Peerenboom, E., Steinbiss, H-H., Antoniw, J. F. and Adams, M. J. 1996. Barley mild mosaic virus: deletions, duplications and transmission. Sherwood, J. L. and Rush, C. M. (ed.) Proceedings 3rd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Dundee, 6-7 August 1996 . American Society of Sugar Beet Technologists, Denver. pp. 9-12
Are specific genes expressed or repressed during arbuscular mycorrhiza symbiosis, responsible for biocontrol of root pathogens?
C2 - Non-edited contributions to conferences
Tahiri-Alaoui, A. and Antoniw, J. F. 1996. Are specific genes expressed or repressed during arbuscular mycorrhiza symbiosis, responsible for biocontrol of root pathogens? Abstracts 1st International Conference on Mycorrhizae, University of California at Berkeley, 4-9 August 1996 .
Cloning of genes associated with the colonization of tomato roots by the arbuscular mycorrhizal fungus Glomus mosseae
A - Papers appearing in refereed journals
Tahiri-Alaoui, A. and Antoniw, J. F. 1996. Cloning of genes associated with the colonization of tomato roots by the arbuscular mycorrhizal fungus Glomus mosseae. Agronomie. 16, pp. 563-571.
Sequence analysis of wheat and oat furovirus capsid protein genes suggests that oat golden stripe virus is a strain of soil-borne wheat mosaic virus
A - Papers appearing in refereed journals
Chen, J. P., Shi, N-N., Wilson, T. M. A., Antoniw, J. F., Macfarlane, S. A. and Adams, M. J. 1996. Sequence analysis of wheat and oat furovirus capsid protein genes suggests that oat golden stripe virus is a strain of soil-borne wheat mosaic virus. Virus Research. 41, pp. 179-183. https://doi.org/10.1016/0168-1702(96)01271-3
Single-strand conformation polymorphism analysis of RT-PCR products of UK isolates of barley yellow mosaic virus
A - Papers appearing in refereed journals
Shi, N-N, Chen, J., Wilson, T. M. A., Macfarlane, S. A., Antoniw, J. F. and Adams, M. J. 1996. Single-strand conformation polymorphism analysis of RT-PCR products of UK isolates of barley yellow mosaic virus. Virus Research. 44, pp. 1-9. https://doi.org/10.1016/0168-1702(96)01328-7
Windows application for analysing DNA sequences
J - Computer programs
Antoniw, J. F. 1996. Windows application for analysing DNA sequences.
The complete nucleotide sequence of RNA-2 of a fungally-transmitted UK isolate of barley mild mosaic bymovirus and identification of amino acid combinations possibly involved in fungus transmission
A - Papers appearing in refereed journals
Peerenboom, E., Jacobi, V., Antoniw, J. F., Schlichter, U., Cartwright, E. J., Steinbiss, H-H. and Adams, M. J. 1996. The complete nucleotide sequence of RNA-2 of a fungally-transmitted UK isolate of barley mild mosaic bymovirus and identification of amino acid combinations possibly involved in fungus transmission. Virus Research. 40, pp. 149-159. https://doi.org/10.1016/0168-1702(95)01267-2
Suite of MS-DOS programs for identifying short regions of homology in virus sequences, which could be used as primer sites
J - Computer programs
Antoniw, J. F. 1995. Suite of MS-DOS programs for identifying short regions of homology in virus sequences, which could be used as primer sites.
Studies of UK isolates of barley yellow mosaic virus
C2 - Non-edited contributions to conferences
Shi, N., Adams, M. J., Antoniw, J. F., Chen, J., Macfarlane, S. A. and Wilson, T. M. A. 1995. Studies of UK isolates of barley yellow mosaic virus.
Movement of bymoviruses
C1 - Edited contributions to conferences/learned societies
Schenk, P., Sohn, A., Adams, M. J., Antoniw, J. F. and Steinbiss, H-H. 1995. Movement of bymoviruses. Proceedings International Symposium on 75 Years of Phytopatholgical and Resistance Research at Aschersleben, Aschersleben, 12-16 June 1995 . pp. 148-151
Movement of bymoviruses and functions of RNA2-encoded proteins of barley yellow mosaic virus
A - Papers appearing in refereed journals
Schenk, P., Sohn, A., Adams, M. J., Antoniw, J. F., Hamacher, J. and Steinbiss, H. H. 1995. Movement of bymoviruses and functions of RNA2-encoded proteins of barley yellow mosaic virus. Agronomie. 15, pp. 387-391.
An analysis of differential display shows a strong bias towards high copy number mRNAs
A - Papers appearing in refereed journals
Bertioli, D. J., Schlichter, U. H. A., Adams, M. J., Burrows, P. R., Steinbiss, H-H and Antoniw, J. F. 1995. An analysis of differential display shows a strong bias towards high copy number mRNAs. Nucleic Acids Research. 23, pp. 4520-4523. https://doi.org/10.1093/nar/23.21.4520
A new method for designing PCR primers specific for groups of sequences and its application to plant viruses
A - Papers appearing in refereed journals
Antoniw, J. F. 1995. A new method for designing PCR primers specific for groups of sequences and its application to plant viruses. Molecular Biotechnology. 4, pp. 111-119.
Molecular characterisation of UK isolates of barley yellow mosaic bymovirus
A - Papers appearing in refereed journals
Shi, N-N., Zhu, M., Chen, J., Stratford, R., Wilson, T. M. A., Antoniw, J. F., Foulds, I. J., Macfarlane, S. A. and Adams, M. J. 1995. Molecular characterisation of UK isolates of barley yellow mosaic bymovirus. Virus Research. 38, pp. 193-204. https://doi.org/10.1016/0168-1702(95)00057-W
Cloning and sequence analysis of RNA-2 of a mechanically transmitted UK isolate of barley mild mosaic bymovirus (BaMMV)
A - Papers appearing in refereed journals
Jacobi, V., Peerenboom, E., Schenk, P. M., Antoniw, J. F., Steinbiss, H-H and Adams, M. J. 1995. Cloning and sequence analysis of RNA-2 of a mechanically transmitted UK isolate of barley mild mosaic bymovirus (BaMMV). Virus Research. 37, pp. 99-111. https://doi.org/10.1016/0168-1702(95)00024-k
Movement of barley mild mosaic and barley yellow mosaic viruses in leaves and roots of barley
A - Papers appearing in refereed journals
Schenk, P. M., Antoniw, J. F., Batista, M De F., Jacobi, V., Adams, M. J. and Steinbiss, H. H. 1995. Movement of barley mild mosaic and barley yellow mosaic viruses in leaves and roots of barley. Annals of Applied Biology - AAB. 126 (2), pp. 291-305. https://doi.org/10.1111/j.1744-7348.1995.tb05367.x
Use of differential display reverse transcription PCR to detect endomycorrhiza-related gene expression in pea roots
C2 - Non-edited contributions to conferences
Dumas-Gaudot, E., Martin-Laurent, F. A., Schlichter, U., Franken, P., Antoniw, J. F., Gianinazzi-Pearson, V. and Gianinazzi, S. 1994. Use of differential display reverse transcription PCR to detect endomycorrhiza-related gene expression in pea roots. Proceedings 4th European Sympsoium on Mycorrhizas, Granada, 11-14 July 1994 . pp. 84
Effects of beet cryptic virus infection on sugar beet in field trials
A - Papers appearing in refereed journals
Xie, W. S., Antoniw, J. F., White, R. F. and Jolliffe, T. H. 1994. Effects of beet cryptic virus infection on sugar beet in field trials. Annals of Applied Biology - AAB. 124 (3), pp. 451-459. https://doi.org/10.1111/j.1744-7348.1994.tb04150.x
Expression of the PR-b1" gene in the roots of two Nicotiana species and their amphidiploid hybrid infected with virulent and avirulent races of Chalara elegans
A - Papers appearing in refereed journals
Tahiri-Alaoui, A., Dumas-Gaudot, E., Gianinazzi, S. and Antoniw, J. F. 1993. Expression of the PR-b1" gene in the roots of two Nicotiana species and their amphidiploid hybrid infected with virulent and avirulent races of Chalara elegans. Plant Pathology. 42 (5), pp. 728-736. https://doi.org/10.1111/j.1365-3059.1993.tb01559.x
A possible mechanism for the antiviral activity of pokeweed antiviral protein
A - Papers appearing in refereed journals
Chen, Z-C., Antoniw, J. F. and White, R. F. 1993. A possible mechanism for the antiviral activity of pokeweed antiviral protein. Physiological and Molecular Plant Pathology. 42, pp. 249-258.
Expression of pokeweed (Phytolacca americana) antiviral protein cDNA in Escherichia coli and its antiviral activity
A - Papers appearing in refereed journals
Chen, Z-C., Antoniw, J. F., Lin, Q. and White, R. F. 1993. Expression of pokeweed (Phytolacca americana) antiviral protein cDNA in Escherichia coli and its antiviral activity. Physiological and Molecular Plant Pathology. 42, pp. 237-247.
Nucleotide sequence of beet cryptic virus 3 dsRNA2 which encodes a putative RNA-dependent RNA polymerase
A - Papers appearing in refereed journals
Xie, W. S., Antoniw, J. F. and White, R. F. 1993. Nucleotide sequence of beet cryptic virus 3 dsRNA2 which encodes a putative RNA-dependent RNA polymerase. Journal of General Virology. 74 (7), pp. 1467-1470. https://doi.org/10.1099/0022-1317-74-7-1467
A third cryptic virus in beet (Beta vulgaris )
A - Papers appearing in refereed journals
Xie, W. S., Antoniw, J. F., White, R. F. and Woods, R. D. 1993. A third cryptic virus in beet (Beta vulgaris ). Plant Pathology. 42 (3), pp. 465-470. https://doi.org/10.1111/j.1365-3059.1993.tb01524.x
Expression of the PR-b1"gene in roots of two Nicotiana species and their amphidiploid hybrid infected with virulent and avirulent races of Chalara elegans
C1 - Edited contributions to conferences/learned societies
Tahiri-Alaoui, A., Antoniw, J. F., Dumas-Gaudot, E. and Gianinazzi, S. 1993. Expression of the PR-b1"gene in roots of two Nicotiana species and their amphidiploid hybrid infected with virulent and avirulent races of Chalara elegans. Fritig, B. and Legrand, M. (ed.) Mechanisms of Plant Defense Responses . Kluwer Academic Publishers, Dordrecht, Netherlands. pp. 373
Suite of MS-DOS programs for analysing and comparing plant virus sequences with sequences in EMBL and GenBank databases
J - Computer programs
Antoniw, J. F. 1992. Suite of MS-DOS programs for analysing and comparing plant virus sequences with sequences in EMBL and GenBank databases.
Weak expression of the pathogenesis related PR-b1 gene and localization of related protein during symbiotic endomycorrhizal interactions in tobacco roots
A - Papers appearing in refereed journals
Gianinazzi-Pearson, V., Tahiri-Alaoui, A., Antoniw, J. F., Gianinazzi, S. and Dumas, E. 1992. Weak expression of the pathogenesis related PR-b1 gene and localization of related protein during symbiotic endomycorrhizal interactions in tobacco roots. Endocytobiosis and Cell Research. 8, pp. 177-185.
Plant virus sequences in the EMBL and GenBank nucleotide sequence databases
A - Papers appearing in refereed journals
Antoniw, J. F. 1992. Plant virus sequences in the EMBL and GenBank nucleotide sequence databases. Binary. 4, pp. 169-173.
Identification of Gaeumannomyces graminis var. tritici and G. graminis var. avenae using a DNA probe and non-molecular methods (take-all)
A - Papers appearing in refereed journals
Bateman, G. L., Ward, E. and Antoniw, J. F. 1992. Identification of Gaeumannomyces graminis var. tritici and G. graminis var. avenae using a DNA probe and non-molecular methods (take-all). Mycological Research. 96, pp. 737-742.
Induction and characterisation of some of the pathogenesis-related proteins in sugar beet
A - Papers appearing in refereed journals
Fleming, T. M., Mccarthy, D. A., White, R. F., Antoniw, J. F. and Mikkelsen, J. D. 1991. Induction and characterisation of some of the pathogenesis-related proteins in sugar beet. Physiological and Molecular Plant Pathology. 39, pp. 147-160.
Effect of pokeweed antiviral protein (PAP) on the infection of plant viruses
A - Papers appearing in refereed journals
Chen, Z. C., White, R. F., Antoniw, J. F. and Lin, Q. 1991. Effect of pokeweed antiviral protein (PAP) on the infection of plant viruses. Plant Pathology. 40 (4), pp. 612-620. https://doi.org/10.1111/j.1365-3059.1991.tb02426.x
Pathogenesis-related proteins and induced resistance
C1 - Edited contributions to conferences/learned societies
Antoniw, J. F. and White, R. F. 1990. Pathogenesis-related proteins and induced resistance. Conejero, V. and Vanloon, L. C. (ed.) Workshop on pathogenesis-related proteins in plants. Fundacion Juan March, Madrid.
Cryptic viruses of beet and other plants
B - Book chapters etc edited externally
Antoniw, J. F., White, R. F. and Xie, W. 1990. Cryptic viruses of beet and other plants. in: Recognition and response in plant-virus interactions Springer-Verlag, Berlin.
The effects of a virus inhibitor, NS-83, derived from plants, on virus infection and multiplication in tobacco
A - Papers appearing in refereed journals
Li, H. F., White, R. F. and Antoniw, J. F. 1990. The effects of a virus inhibitor, NS-83, derived from plants, on virus infection and multiplication in tobacco. Journal of Phytopathology. 128 (4), pp. 299-305. https://doi.org/10.1111/j.1439-0434.1990.tb04278.x
Investigations into the aetiology of Ramu stunt, a new sugarcane diseases in Papua and New Guinea.
A - Papers appearing in refereed journals
Jones, P., Antoniw, J. F. and Eastwood, D. 1989. Investigations into the aetiology of Ramu stunt, a new sugarcane diseases in Papua and New Guinea. l'Agronomie Tropicale. 44, pp. 179-184.
Detection of beet cryptic viruses 1 and 2 in a wide range of beet plants using cDNA probes.
A - Papers appearing in refereed journals
Xie, W., Antoniw, J. F. and White, R. F. 1989. Detection of beet cryptic viruses 1 and 2 in a wide range of beet plants using cDNA probes. Plant Pathology. 38, pp. 527-533.
The use of plant viruses as inoculants
B - Book chapters etc edited externally
White, R. F. and Antoniw, J. F. 1989. The use of plant viruses as inoculants. in: Campbell, R. and Macdonald, R. M. (ed.) Microbial inoculation of crop plants IRL Press, Oxford. pp. 79-87
RNA/cDNA hybridization studies of UK isolates of barley yellow mosaic virus.
A - Papers appearing in refereed journals
Batista, M. F., Antoniw, J. F., Swaby, J. F., Jones, P. and Adams, M. J. 1989. RNA/cDNA hybridization studies of UK isolates of barley yellow mosaic virus. Plant Pathology. 38 (2), pp. 226-229. https://doi.org/10.1111/j.1365-3059.1989.tb02137.x
Fungally-transmitted viruses of cereals in the UK.
A - Papers appearing in refereed journals
Adams, M. J., Batista, M. De. F., Swaby, A. G. and Antoniw, J. F. 1989. Fungally-transmitted viruses of cereals in the UK. Bulletin EPPO. 19, pp. 573-577. https://doi.org/10.1111/j.1365-2338.1989.tb00434.x
Plant interferons: a wish or a reality?
B - Book chapters etc edited externally
Gianinazzi, S., Dumas, E., Antoniw, J. F. and White, R. F. 1988. Plant interferons: a wish or a reality? in: Experimental and conceptual plant pathology . Eds. R.S. Singh, U.S. Singh, W.M. Hess & D.J. Weber. New Delhi : Oxfor & IBH Publishing Co. pp. 569-574
Immunocytochemical location of pathogenisis-related b1 protein induced in tobacco mosaic virus-infected or polyacrylic acid-treated tobacco plants.
A - Papers appearing in refereed journals
Dumas, E., Lherminier, J., Gianinazzi, S., White, R. F. and Antoniw, J. F. 1988. Immunocytochemical location of pathogenisis-related b1 protein induced in tobacco mosaic virus-infected or polyacrylic acid-treated tobacco plants. Journal of General Virology. 69 (10), pp. 2687-2694. https://doi.org/10.1099/0022-1317-69-10-2687
The role of pathogenesis-related proteins.
G - Articles in popular magazines and other technical publications
Antoniw, J. F. and White, R. F. 1987. The role of pathogenesis-related proteins.
The detection of PR-1 type proteins in various plant species by immunoelectroblotting.
A - Papers appearing in refereed journals
White, R. F., Rybicki, E. P., Von Wechmar, M. B., Decker, J. L. and Antoniw, J. F. 1987. The detection of PR-1 type proteins in various plant species by immunoelectroblotting. Journal of General Virology. 68, pp. 2043-2048. https://doi.org/10.1099/0022-1317-68-7-2043
Molecular cloning of beet cryptic virus ds RNA.
G - Articles in popular magazines and other technical publications
Antoniw, J. F. 1987. Molecular cloning of beet cryptic virus ds RNA.
The detection of acute paralysis virus in Varroa jacobsoni by the use of a simple indirect ELISA.
A - Papers appearing in refereed journals
Allen, M. F., Ball, B. V., White, R. F. and Antoniw, J. F. 1986. The detection of acute paralysis virus in Varroa jacobsoni by the use of a simple indirect ELISA. Journal of Apicultural Research. 25, pp. 100-105.
Changes with time in the destribution of virus and PR protein around single local lesions of TMV infected tobacco.
A - Papers appearing in refereed journals
Antoniw, J. F. and White, R. F. 1986. Changes with time in the destribution of virus and PR protein around single local lesions of TMV infected tobacco. Plant Molecular Biology. 6, pp. 145-149.
Molecular cloning of the double-stranded RNA of beet cryptic viruses.
G - Articles in popular magazines and other technical publications
Antoniw, J. F., Linthorst, H. J. M., White, R. F. and Bol, J. F. 1986. Molecular cloning of the double-stranded RNA of beet cryptic viruses. Journal of General Virology. 67 (9), pp. 2047-2051. https://doi.org/10.1099/0022-1317-67-9-2047
Molecular cloning of beet cryptic virus dsRNA.
G - Articles in popular magazines and other technical publications
White, R. F. and Antoniw, J. F. 1986. Molecular cloning of beet cryptic virus dsRNA.
The chemical induction of PR(6) proteins and resistance to TMV infection in tobacco
A - Papers appearing in refereed journals
White, R. F., Dumas, E., Shaw, P. and Antoniw, J. F. 1986. The chemical induction of PR(6) proteins and resistance to TMV infection in tobacco. Antiviral Research. 6, pp. 177-185.
Molecular cloning of the double-stranded RNA of beet cryptic viruses.
A - Papers appearing in refereed journals
Antoniw, J. F., Linthorst, H. J. M., White, R. F. and Bol, J. F. 1986. Molecular cloning of the double-stranded RNA of beet cryptic viruses. Journal of General Virology. 67, pp. 2047-2051.
The detection of pr (b) protein and tmv by elisa in systemic and localized virus-infections of tobacco
A - Papers appearing in refereed journals
Antoniw, J. F., White, R. F., Barbara, D. J., Jones, P. and Longley, A. 1985. The detection of pr (b) protein and tmv by elisa in systemic and localized virus-infections of tobacco. Plant Molecular Biology. 4 (1), pp. 55-60. https://doi.org/10.1007/bf02498715
Biochemical and serological characterization of b-proteins from nicotiana species
A - Papers appearing in refereed journals
Ahl, P., Antoniw, J. F., White, R. F. and Gianinazzi, S. 1985. Biochemical and serological characterization of b-proteins from nicotiana species. Plant Molecular Biology. 4 (1), pp. 31-37. https://doi.org/10.1007/bf02498713
Virus and pathogenesis-related protein accumulation after tobacco-mosaic-virus infection of tobacco
A - Papers appearing in refereed journals
Antoniw, J. F., White, R. F., Barbara, D. J. and Longley, A. 1984. Virus and pathogenesis-related protein accumulation after tobacco-mosaic-virus infection of tobacco. Biochemical Society Transactions. 12 (5), pp. 828-828. https://doi.org/10.1042/bst0120828
An examination of the effect of human alpha-interferons on the infection and multiplication of tobacco mosaic-virus in tobacco
A - Papers appearing in refereed journals
Antoniw, J. F., White, R. F. and Carr, J. P. 1984. An examination of the effect of human alpha-interferons on the infection and multiplication of tobacco mosaic-virus in tobacco. Phytopathologische Zeitschrift-Journal of Phytopathology. 109 (4), pp. 367-371.
Agrobacterium-rhizogenes-transformed and untransformed tobacco plants have similar pathogenesis related protein concentrations and similar susceptibility to virus-infection
A - Papers appearing in refereed journals
Ooms, G., White, R. F., Antoniw, J. F. and Gibson, R. W. 1984. Agrobacterium-rhizogenes-transformed and untransformed tobacco plants have similar pathogenesis related protein concentrations and similar susceptibility to virus-infection. Plant science letters. 35 (2), pp. 169-173. https://doi.org/10.1016/0304-4211(84)90191-3
Pathogenesis-related proteins in plants and tissues of nicotiana-tabacum transformed by agrobacterium-tumefaciens
A - Papers appearing in refereed journals
Antoniw, J. F., Ooms, G., White, R. F., Wullems, G. J. and Vanvlotendoting, L. 1983. Pathogenesis-related proteins in plants and tissues of nicotiana-tabacum transformed by agrobacterium-tumefaciens. Plant Molecular Biology. 2 (6), pp. 317-320. https://doi.org/10.1007/bf01578593
Pathogenesis-related proteins in crown gall tissue
A - Papers appearing in refereed journals
Antoniw, J. F. 1983. Pathogenesis-related proteins in crown gall tissue. Netherlands Journal of Plant Pathology. 89 (6), pp. 312-313. https://doi.org/10.1007/bf01995274
Electrophoretic and serological comparisons of pathogenesis-related (b) proteins from different plant-species
A - Papers appearing in refereed journals
Vanloon, L. C., Gianinazzi, S., White, R. F., Abujawdah, Y., Ahl, P., Antoniw, J. F., Boller, T., Camachohenriquez, A., Conejero, V., Coussirat, J. C., Goodman, R. N., Maiss, E., Redolfi, P. and Wilson, T. M. A. 1983. Electrophoretic and serological comparisons of pathogenesis-related (b) proteins from different plant-species. Netherlands Journal of Plant Pathology. 89 (6), pp. 293-303. https://doi.org/10.1007/BF01995264
The effects of aspirin and polyacrylic-acid on the multiplication and spread of tmv in different cultivars of tobacco with and without the n-gene
A - Papers appearing in refereed journals
White, R. F., Antoniw, J. F., Carr, J. P. and Woods, R. D. 1983. The effects of aspirin and polyacrylic-acid on the multiplication and spread of tmv in different cultivars of tobacco with and without the n-gene. Phytopathologische Zeitschrift-Journal of Phytopathology. 107 (3), pp. 224-232.
Direct control of virus diseases
A - Papers appearing in refereed journals
White, R. F. and Antoniw, J. F. 1983. Direct control of virus diseases. Crop Protection. 2 (3), pp. 259-271. https://doi.org/10.1016/0261-2194(83)90001-7
Biochemical-properties of the pathogenesis-related proteins from tobacco
A - Papers appearing in refereed journals
Antoniw, J. F. and White, R. F. 1983. Biochemical-properties of the pathogenesis-related proteins from tobacco. Netherlands Journal of Plant Pathology. 89 (6), pp. 255-264. https://doi.org/10.1007/bf01995260
Latent messenger RNA in tobacco (Nicotiana tabacum)
A - Papers appearing in refereed journals
Carr, J. P., Antoniw, J. F., White, R. F. and Wilson, T. M. A. 1982. Latent messenger RNA in tobacco (Nicotiana tabacum). Biochemical Society Transactions. 10, pp. 353-354.
Distribution of the ppp(A2′p)nA-binding protein and interferon-related enzymes in animals, plants, and lower organisms
A - Papers appearing in refereed journals
Cayley, P. J., White, R. F., Antoniw, J. F., Walesby, N. J. and Kerr, I. M. 1982. Distribution of the ppp(A2′p)nA-binding protein and interferon-related enzymes in animals, plants, and lower organisms. Biochemical and Biophysical Research Communications. 108 (3), pp. 1243-1250. https://doi.org/10.1016/0006-291x(82)92133-7
Comparison of the effects of salicylic-acid and ethephon with virus-induced hypersensitivity and acquired-resistance in tobacco
A - Papers appearing in refereed journals
Vanloon, L. C. and Antoniw, J. F. 1982. Comparison of the effects of salicylic-acid and ethephon with virus-induced hypersensitivity and acquired-resistance in tobacco. Netherlands Journal of Plant Pathology. 88 (6), pp. 237-256.
The presence of pathogenesis-related proteins in callus of xanthi-nc tobacco
A - Papers appearing in refereed journals
Antoniw, J. F., Kueh, J. S. H., Walkey, D. G. A. and White, R. F. 1981. The presence of pathogenesis-related proteins in callus of xanthi-nc tobacco. Phytopathologische Zeitschrift-Journal of Phytopathology. 101 (2), pp. 179-184.
The effects of aspirin and polyacrylic-acid on soluble leaf proteins and resistance to virus-infection in 5 cultivars of tobacco
A - Papers appearing in refereed journals
Antoniw, J. F. and White, R. F. 1980. The effects of aspirin and polyacrylic-acid on soluble leaf proteins and resistance to virus-infection in 5 cultivars of tobacco. Phytopathologische Zeitschrift-Journal of Phytopathology. 98 (4), pp. 331-341.
Comparison of Three Pathogenesis-related Proteins from Plants of Two Cultivars of Tobacco Infected with TMV
A - Papers appearing in refereed journals
Antoniw, J. F., Ritter, C. E., Pierpoint, W. S. and Vanloon, L. C. 1980. Comparison of Three Pathogenesis-related Proteins from Plants of Two Cultivars of Tobacco Infected with TMV . Journal of General Virology. 47 (1), pp. 79-87. https://doi.org/10.1099/0022-1317-47-1-79
Purification of a tobacco leaf protein associated with resistance to virus infection
A - Papers appearing in refereed journals
Antoniw, J. F. and Pierpoint, W. S. 1978. Purification of a tobacco leaf protein associated with resistance to virus infection. Biochemical Society Transactions. 6, pp. 248-250. https://doi.org/10.1042/bst0060248
The Purification and Properties of One of the ‘b’ Proteins from Virus-Infected Tobacco Plants
A - Papers appearing in refereed journals
Antoniw, J. F. and Pierpoint, W. S. 1978. The Purification and Properties of One of the ‘b’ Proteins from Virus-Infected Tobacco Plants. Journal of General Virology. 39 (2), pp. 343-350. https://doi.org/10.1099/0022-1317-39-2-343
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