Weed Manager - a model-based decision support system for weed management in arable crops

A - Papers appearing in refereed journals

Parsons, D. J., Benjamin, L. R., Clarke, J., Ginsburg, D., Mayes, A., Milne, A. E. and Wilkinson, D. J. 2009. Weed Manager - a model-based decision support system for weed management in arable crops. Computers and Electronics in Agriculture. 65, pp. 155-167. https://doi.org/10.1016/j.compag.2008.08.007

Authors	Parsons, D. J., Benjamin, L. R., Clarke, J., Ginsburg, D., Mayes, A., Milne, A. E. and Wilkinson, D. J.
Year of Publication	2009
Journal	Computers and Electronics in Agriculture
Journal citation	65, pp. 155-167
Digital Object Identifier (DOI)	https://doi.org/10.1016/j.compag.2008.08.007
Open access	Published as non-open access
Funder project or code	Centre for Mathematical and Computational Biology (MCB)
	A weed management support system (WMSS) for weed control in winter wheat

Related outputs

Threeruns Carabid dataset

N - Datasets

Jowett, K., Milne, A. E., Garrett, D., Blumgart, D., Potts, S. G., Senapathi, D. and Storkey, J. 2024. Threeruns Carabid dataset. Rothamsted Research. https://doi.org/10.23637/rothamsted.990y0

Using a multi-scale approach to examine the effects of field margins and landscape features on predatory carabid communities in crop fields

A - Papers appearing in refereed journals

Jowett, K., Milne, A. E., Garrett, D., Blumgart, D., Potts, S. G., Senapathi, D. and Storkey, J. 2024. Using a multi-scale approach to examine the effects of field margins and landscape features on predatory carabid communities in crop fields . Agriculture, Ecosystems & Environment. 373 (1 October), p. 109115. https://doi.org/10.1016/j.agee.2024.109115

A framework for evaluating the value of agricultural pest management decision support systems

A - Papers appearing in refereed journals

Helps, J., Van den Bosch, F., Paveley, N., Jorgensen, L. N., Holst, N. and Milne, A. E. 2024. A framework for evaluating the value of agricultural pest management decision support systems. European Journal of Plant Pathology. https://doi.org/10.1007/s10658-024-02878-1

Exploration of data for analysis using boundary line methodology

A - Papers appearing in refereed journals

Miti, C., Milne, A. E., Giller, K. E., Sadras, V. O. and Lark, R. M. 2024. Exploration of data for analysis using boundary line methodology. Computers and Electronics in Agriculture. 219, p. 108794. https://doi.org/10.1016/j.compag.2024.108794

An agrogeophysical modelling framework for the detection of soil compaction spatial variability due to grazing using field-scale electromagnetic induction data.

A - Papers appearing in refereed journals

Romero-Ruiz, A., O'Leary, D., Daly, E., Tuohy, P., Milne, A. E., Coleman, K. and Whitmore, A. P. 2024. An agrogeophysical modelling framework for the detection of soil compaction spatial variability due to grazing using field-scale electromagnetic induction data. Soil Use and Management. 40 (2), p. e13039. https://doi.org/10.1111/sum.13039

Implications and impacts of aligning regional agriculture with a healthy diet

A - Papers appearing in refereed journals

Sharp, R., Bellamy, A. S., Clear, A., Finnigan, S. M., Furness, E., Meador, E., Metcalfe, H., Mills, S., Coleman, K., Whitmore, A. P. and Milne, A. E. 2024. Implications and impacts of aligning regional agriculture with a healthy diet. Journal of Cleaner Production. 449, p. 141375. https://doi.org/10.1016/j.jclepro.2024.141375

The Concepts and quantification of yield gap using boundary lines. A review

A - Papers appearing in refereed journals

Miti, C., Milne, A. E., Giller, K. E. and Lark, R. M. 2024. The Concepts and quantification of yield gap using boundary lines. A review. Field Crops Research. 311 (1 May), p. 109365. https://doi.org/10.1016/j.fcr.2024.109365

Stepwise model parametrisation using satellite imagery and hemispherical photography: Tuning AquaCrop sensitive parameters for improved winter wheat yield predictions in semi-arid regions

A - Papers appearing in refereed journals

Oulaid, B., Milne, A. E., Waine, T., Alami, R. E., Rafiqi, M. and Corstanje, R. 2024. Stepwise model parametrisation using satellite imagery and hemispherical photography: Tuning AquaCrop sensitive parameters for improved winter wheat yield predictions in semi-arid regions. Field Crops Research. 309, p. 109327. https://doi.org/10.1016/j.fcr.2024.109327

Trade-offs constrain the success of glyphosate-free farming.

A - Papers appearing in refereed journals

Metcalfe, H., Storkey, J., Hull, R. I., Bullock, J. M., Whitmore, A. P., Sharp, R. and Milne, A. E. 2023. Trade-offs constrain the success of glyphosate-free farming. Scientific Reports. 14, p. 8001. https://doi.org/10.1038/s41598-024-58183-8

Host map of Ash trees in Great Britain

N - Datasets

Brown, N., Alonso Chavez, V., Milne, A. E. and Parnell, S. 2023. Host map of Ash trees in Great Britain. Rothamsted Research. https://doi.org/10.23637/rothamsted.98y37

Grazing livestock move by Levy walks: Implications for soil health and environment

A - Papers appearing in refereed journals

Romero-Ruiz, A., Rivero, M. J., Milne, A. E., Morgan, S., De-Meo-Filho, P., Pulley, S., Segura, C., Harris, P., Lee, M. R. F., Coleman, K., Cardenas, L. M. and Whitmore, A. P. 2023. Grazing livestock move by Levy walks: Implications for soil health and environment. Journal of Environmental Management. 345 (1), p. 118835. https://doi.org/10.1016/j.jenvman.2023.118835

Promoting dietary changes for achieving health and sustainability targets

A - Papers appearing in refereed journals

Bellamy, A. S., Furness, E., Mills, S., Clear, A., Finnigan, S. M., Meador, J. E., Milne, A. E. and Sharp, R. T. 2023. Promoting dietary changes for achieving health and sustainability targets. Frontiers in Sustainable Food Systems. 7, p. 1160627. https://doi.org/10.3389/fsufs.2023.1160627

Explainable neural networks for trait-based multispecies distribution modelling—A case study with butterflies and moths

A - Papers appearing in refereed journals

Bourhis, Y., Bell, J. R., Shortall, C. R., Kunin, W. and Milne, A. E. 2023. Explainable neural networks for trait-based multispecies distribution modelling—A case study with butterflies and moths. Methods in ecology and evolution. 14 (6), pp. 1531-1542. https://doi.org/10.1111/2041-210X.14097

Evidence of collaborative opportunities to ensure long-term sustainability in African farming

A - Papers appearing in refereed journals

El-Fartassi, I., Milne, A. E., El Alami, R., Rafiqi, M., Hassall, K. L., Waine, T., Zawadzka, J., Diarra, A. and Corstanje, R. 2023. Evidence of collaborative opportunities to ensure long-term sustainability in African farming. Journal of Cleaner Production. 392, p. 136170. https://doi.org/10.1016/j.jclepro.2023.136170

Modelling changes in soil structure caused by livestock treading

A - Papers appearing in refereed journals

Romero-Ruiz, A., Monaghan. R, Milne, A. E., Coleman, K., Cardenas, L. M., Segura, C. and Whitmore, A. P. 2023. Modelling changes in soil structure caused by livestock treading. Geoderma. 431, p. 116331. https://doi.org/10.1016/j.geoderma.2023.116331

A loss function to evaluate agricultural decision‑making under uncertainty: a case study of soil spectroscopy

A - Papers appearing in refereed journals

Breure, T., Haefele, S. M., Hannam, J. A., Corstanje, R., Webster, R., Moreno-Rojas, S. and Milne, A. E. 2022. A loss function to evaluate agricultural decision‑making under uncertainty: a case study of soil spectroscopy. Precision Agriculture. 23, pp. 1333 - 1353. https://doi.org/10.1007/s11119-022-09887-2

Communication and building social capital in community supported agriculture

A - Papers appearing in refereed journals

Furness, E., Bellamy, A. S., Clear, A., Finnigan, S. M., Meador, J. E., Mills, S., Milne, A. E. and Sharp, R. T. 2022. Communication and building social capital in community supported agriculture. Journal of Agriculture, Food Systems, and Community Development. 12 (1), pp. 63-78. https://doi.org/10.5304/jafscd.2022.121.009

Early Detection and Spread of Tomato Powdery Mildew (TPM) in Commercial Greenhouses

A - Papers appearing in refereed journals

Sokolidi, A., Webster, R., Milne, A. E., Clark, S. J., Clarkson, J., Bielik M., Morley, P. and West, J. S. 2022. Early Detection and Spread of Tomato Powdery Mildew (TPM) in Commercial Greenhouses. Phytopathology. 112 (11), pp. 49-49.

Spatial characteristics of the fungus powdery mildew (Erysiphe neolycopersici) on tomatoes and its spread in industrial greenhouses

A - Papers appearing in refereed journals

Sokolidi, A., Webster, R., Milne, A. E., Bielik, M., Morley, P., Clarkson, J. P. and West, J. S. 2022. Spatial characteristics of the fungus powdery mildew (Erysiphe neolycopersici) on tomatoes and its spread in industrial greenhouses. Biostatistics. 1 (1), pp. 18-30.

Early Detection and Spread of Tomato Powdery Mildew (TPM) in Commercial Greenhouses

Conference poster

Decisions, uncertainty and spatial information

A - Papers appearing in refereed journals

Lark, R. M., Chagumaira, C. and Milne, A. E. 2022. Decisions, uncertainty and spatial information. Spatial Statistics. 50, p. 100619. https://doi.org/10.1016/j.spasta.2022.100619

Cereal grain mineral micronutrient and soil chemistry data from GeoNutrition surveys in Ethiopia and Malawi

A - Papers appearing in refereed journals

Kumssa, D. B., Mossa, A. W., Amede, T., Ander, E. L., Botoman, E. H. B., Chagumaira, C., Chimungu, J. G., Davies, K. G., Gameda, S., Haefele, S. M., Hailu, K., Joy, E. J. M., Lark, R. M., Ligowe, I. S., McGrath, S. P., Milne, A. E., Muleya, P., Munthal, M., Towett, E., Walsh, M. G., Wilson, L., D.Young, S., Haji, I. R., Broadley, M., Gashu, D. and Nalivata, P. C. 2022. Cereal grain mineral micronutrient and soil chemistry data from GeoNutrition surveys in Ethiopia and Malawi. Scientific Data. 9 (1), p. 443. https://doi.org/10.1038/s41597-022-01500-5

Yearly occurrence of 544 species of moths (UK 1990-2019), with trait values and putative environmental drivers.

N - Datasets

Bourhis, Y., Bell, J. R., Shortall, C. R. and Milne, A. E. 2022. Yearly occurrence of 544 species of moths (UK 1990-2019), with trait values and putative environmental drivers. Rothamsted Research. https://doi.org/10.23637/rothamsted.988z5

Modelling the Persistence of Weed Populations

B - Book chapters etc edited externally

Storkey, J., Gardarin, A., Colbach, N., Metcalfe, H. and Milne, A. E. 2022. Modelling the Persistence of Weed Populations. in: Upadhyaya, M. K., Clements, D. R. and Shrestha, A. (ed.) Persistence Strategies of Weeds Wiley. pp. Chapter 9

Soil and landscape factors influence geospatial variation in maize grain zinc concentration in Malawi

A - Papers appearing in refereed journals

Botoman, L., Chagumaira, C., Mossa, A. W., Amede, T., Ander, E. L., Bailey, E. H., Chimungu, J. G., Gameda, S., Gashu, D., Haefele, S. M., Joy, E. J. M., Kumssa, D. B., Ligowe, I. S., McGrath, S. P., Milne, A. E., Munthali, M., Towett, E., Walsh, M. G., Wilson, L., Young, S. D., Broadley, M. R., Lark, R. M. and Nalivata, P. C. 2022. Soil and landscape factors influence geospatial variation in maize grain zinc concentration in Malawi. Scientific Reports. 12, p. 7986. https://doi.org/10.1038/s41598-022-12014-w

Stakeholder interpretation of probabilistic representations of uncertainty in spatial information an example on the nutritional quality of staple

A - Papers appearing in refereed journals

Chagumaira, C., Nalivata, P. C., Chimungu, J. G., Gashu, D., Broadley, M., Milne, A. E. and Lark, R. M. 2022. Stakeholder interpretation of probabilistic representations of uncertainty in spatial information an example on the nutritional quality of staple. International Journal Of Geographical Information Science. 36 (12), pp. 2446-2472. https://doi.org/10.1080/13658816.2021.2020278

Communicating Carabids: Engaging farmers to encourage uptake of Integrated Pest Management.

A - Papers appearing in refereed journals

Jowett, K., Milne, A. E., Potts, S. G., Senapathi, D. and Storkey, J. 2022. Communicating Carabids: Engaging farmers to encourage uptake of Integrated Pest Management. Pest Management Science. 78 (6), pp. 2477-2491. https://doi.org/10.1002/ps.6878

Exploring the effects of land management change on productivity, carbon and nutrient balance: Application of an Ensemble Modelling Approach to the upper River Taw observatory, UK

A - Papers appearing in refereed journals

Hassall, K. L., Coleman, K., Dixit, P., Granger, S. J., Zhang, Y., Sharp, R., Wu, L., Whitmore, A. P., Richter, G. M., Collins, A. L. and Milne, A. E. 2022. Exploring the effects of land management change on productivity, carbon and nutrient balance: Application of an Ensemble Modelling Approach to the upper River Taw observatory, UK. Science of the Total Environment. 824, p. 153824. https://doi.org/10.1016/j.scitotenv.2022.153824

Dynamics of bacterial blight disease in resistant and susceptible rice varieties

A - Papers appearing in refereed journals

Niones, J. T., Sharp, R. T., Donayre, D. K. M., Oreiro, E. G. M., Milne, A. E. and Oliva, R. 2022. Dynamics of bacterial blight disease in resistant and susceptible rice varieties. European Journal of Plant Pathology. 163, pp. 1-17. https://doi.org/10.1007/s10658-021-02452-z

Comparing the effect of different sample conditions and spectral libraries on the prediction accuracy of soil properties from near- and mid-infrared spectra at the field-scale

A - Papers appearing in refereed journals

Breure, T. S., Prout, J. M., Haefele, S. M., Milne, A. E., Hannam, J. A., Moreno-Rojas, S. and Corstanje, R. 2022. Comparing the effect of different sample conditions and spectral libraries on the prediction accuracy of soil properties from near- and mid-infrared spectra at the field-scale. Soil & Tillage Research. 215, p. 105196. https://doi.org/10.1016/j.still.2021.105196

The role of community-supported agriculture in building health and sustainability into UK diets: a mixed methods study

A - Papers appearing in refereed journals

Mills, S., Furness, E., Clear, A. K., Finnigan, S. M., Meador, J. E., Milne, A. E., Sharp, R. T. and Bellamy, A. S. 2021. The role of community-supported agriculture in building health and sustainability into UK diets: a mixed methods study. Lancet. 398 (Supplement 2), p. S68. https://doi.org/10.1016/S0140-6736(21)02611-8

The role of community-supported agriculture in building health and sustainability into UK diets: a mixed methods study

A - Papers appearing in refereed journals

Mills, S., Furness, E., Clear, A. K., Finnigan, S. M., Meador, E., Milne, A. E., Sharp, R. T. and Bellamy, A. S. 2021. The role of community-supported agriculture in building health and sustainability into UK diets: a mixed methods study. Lancet. 398 (1 Nov 21), pp. S68-68. https://doi.org/10.1016/S0140-6736(21)02611-8

Maximizing realized yield by breeding for disease tolerance: A case study for Septoria tritici blotch

A - Papers appearing in refereed journals

Van Den Bosch, F., Smith, J., Wright, P., Milne, A. E., Van Den Berg, F., Kock-Appelgren, P., Foulkes, J. and Paveley, N. 2021. Maximizing realized yield by breeding for disease tolerance: A case study for Septoria tritici blotch. Plant Pathology. https://doi.org/10.1111/ppa.13509

Elucidating the performance of hybrid models for predicting extreme water flow events through variography and wavelet analyses

A - Papers appearing in refereed journals

Curceac, S., Milne, A. E., Atkinson, P. M., Wu, L. and Harris, P. 2021. Elucidating the performance of hybrid models for predicting extreme water flow events through variography and wavelet analyses. Journal of Hydrology. 598 (July), p. 126442. https://doi.org/10.1016/j.jhydrol.2021.126442

Modelling in cassava production and pest management under biotic and abiotic constraints

A - Papers appearing in refereed journals

Alonso Chavez, V., Milne, A. E., Van Den Bosch, F., Pita, J. and Mcquaid, C. F. 2021. Modelling in cassava production and pest management under biotic and abiotic constraints. Plant Molecular Biology. https://doi.org/10.1007/s11103-021-01170-8

Simulating cropping sequences using earth observation data

A - Papers appearing in refereed journals

Sharp, R. T., Henrys, P. A., Jarvis, S. G., Whitmore, A. P., Milne, A. E., Coleman, K., Mohankumar, S. E. P. and Metcalfe, H. 2021. Simulating cropping sequences using earth observation data. Computers and Electronics in Agriculture. 188, p. 106330. https://doi.org/10.1016/j.compag.2021.106330

A case study on the effects of data temporal resolution on the simulation of water flux extremes using a process-based model at the grassland field scale

A - Papers appearing in refereed journals

Wu, L., Curceac, S., Atkinson, Peter, Milne, A. E. and Harris, P. 2021. A case study on the effects of data temporal resolution on the simulation of water flux extremes using a process-based model at the grassland field scale. Agricultural Water Management. 255, p. 107049. https://doi.org/10.1016/j.agwat.2021.107049

The nutritional quality of cereals varies geospatially in Ethiopia and Malawi

A - Papers appearing in refereed journals

Gashu, D., Nalivata, P. C., Amede, T., Ander, E. L., Bailey, E. H., Botoman, L., Chagumaira, C., Gameda, S., Haefele, S. M., Hailu, K., Joy, E. J. M., Kalimbira, A. A., Kumssa, D. B., Lark, R. M., Ligowe, I. S., McGrath, S. P., Milne, A. E., Mossa, A. W., Munthali, M., Towett, E. K., Walsh, M. G., Wilson, L., Young, S. D. and Broadley, M. R. 2021. The nutritional quality of cereals varies geospatially in Ethiopia and Malawi. Nature. 594, pp. 71-76. https://doi.org/10.1038/s41586-021-03559-3

Defining Integrated Weed Management: A Novel Conceptual Framework for Models

A - Papers appearing in refereed journals

Storkey, J., Helps, J., Hull, R. I., Milne, A. E. and Metcalfe, H. 2021. Defining Integrated Weed Management: A Novel Conceptual Framework for Models. Agronomy. 11 (4), p. 747. https://doi.org/10.3390/agronomy11040747

The potential for soybean to diversify the production of plant-based protein in the UK

A - Papers appearing in refereed journals

Coleman, K., Whitmore, A. P., Hassall, K. L., Shield, I. F., Semenov, M. A., Dobermann, A., Bourhis, Y., Eskandary, A. and Milne, A. E. 2021. The potential for soybean to diversify the production of plant-based protein in the UK. Science of the Total Environment. 767, p. 144903. https://doi.org/10.1016/j.scitotenv.2020.144903

Artificial neural networks for monitoring network optimisation—a practical example using a national insect survey

A - Papers appearing in refereed journals

Bourhis, Y., Bell, J. R., Van Den Bosch, F. and Milne, A. E. 2021. Artificial neural networks for monitoring network optimisation—a practical example using a national insect survey. Environmental Modelling and Software. 135, p. 104925. https://doi.org/10.1016/j.envsoft.2020.104925

Predicting the growth of lettuce from soil infrared reflectance spectra: the potential for crop management

A - Papers appearing in refereed journals

Breure, T. S., Milne, A. E., Webster, R., Haefele, S. M., Hannam, J. A., Moreno-Rojas, S. and Corstanje, R. 2021. Predicting the growth of lettuce from soil infrared reflectance spectra: the potential for crop management. Precision Agriculture. 22, p. 226–248. https://doi.org/10.1007/s11119-020-09739-x

Adjusting for conditional bias in process model simulations of hydrological extremes: an experiment using the North Wyke Farm Platform

A - Papers appearing in refereed journals

Curceac, S., Atkinson, P. M., Milne, A. E., Wu, L. and Harris, P. 2020. Adjusting for conditional bias in process model simulations of hydrological extremes: an experiment using the North Wyke Farm Platform. Frontiers in Artificial Intelligence. 3 (82). https://doi.org/10.3389/frai.2020.565859

Spatial prediction of the concentration of selenium (Se) in grain across part of Amhara Region, Ethiopia

A - Papers appearing in refereed journals

Milne, A. E., Gashu, D., Lark, R. M., Ameded, T., Bailey, E. H., Chagumaira, C., Dunham, S. J., Gameda, S., Kumssa, D. B., Mossa, A. W., Walsh, M. G., Wilson, L., Young, S. D., Ander, E. L., Joy, M. R. B. ., McGrath, S. P. and Broadley, M. 2020. Spatial prediction of the concentration of selenium (Se) in grain across part of Amhara Region, Ethiopia. Science of the Total Environment. 733, p. 139231. https://doi.org/10.1016/j.scitotenv.2020.139231

Using Functional Traits to Model Annual Plant Community Dynamics

A - Papers appearing in refereed journals

Metcalfe, H., Milne, A. E., Deledalle, F. and Storkey, J. 2020. Using Functional Traits to Model Annual Plant Community Dynamics. Ecology. 101 (11), p. e03167. https://doi.org/10.1002/ecy.3167

Spatial and Temporal Stability of Weed Patches in Cereal Fields under Direct Drilling and Harrow Tillage

A - Papers appearing in refereed journals

Izquierdo, J., Milne, A. E., Recasens, J., Royo-Esnal, A., Torra, J., Webster, R. and Baraibar, B. 2020. Spatial and Temporal Stability of Weed Patches in Cereal Fields under Direct Drilling and Harrow Tillage. Agronomy. 10 (4), p. 452. https://doi.org/10.3390/agronomy10040452

UK aphid migration percentiles, covariates and model outputs from the Rothamsted Insect Survey's 12.2 m suction-trap network: 1965 to 2018

N - Datasets

Bourhis, Y., Bell, J. R., Van Den Bosch, F. and Milne, A. E. 2020. UK aphid migration percentiles, covariates and model outputs from the Rothamsted Insect Survey's 12.2 m suction-trap network: 1965 to 2018. Rothamsted Research. https://doi.org/10.23637/rothamsted.979yv

An evaluation of automated GPD threshold selection methods for hydrological extremes across different scales

A - Papers appearing in refereed journals

Curceac, S., Atkinson, P. M., Milne, A. E., Wu, L. and Harris, P. 2020. An evaluation of automated GPD threshold selection methods for hydrological extremes across different scales. Journal of Hydrology. 585, p. 124845. https://doi.org/10.1016/j.jhydrol.2020.124845

Above- and below-ground assessment of carabid community responses to crop type and tillage

A - Papers appearing in refereed journals

Jowett, K., Milne, A. E., Garrett, D., Potts, S. G., Senapathi, D. and Storkey, J. 2020. Above- and below-ground assessment of carabid community responses to crop type and tillage. Agricultural and Forest Entomology. https://doi.org/10.1111/afe.12397

Model-based optimisation of agricultural profitability and nutrient management: a practical approach for dealing with issues of scale

A - Papers appearing in refereed journals

Milne, A. E., Coleman, K., Todman, L. C. and Whitmore, A. P. 2020. Model-based optimisation of agricultural profitability and nutrient management: a practical approach for dealing with issues of scale. Environmental Monitoring And Assessment. 192, p. 730. https://doi.org/10.1007/s10661-020-08699-z

What makes or breaks a campaign to stop an invading plant pathogen?

A - Papers appearing in refereed journals

Milne, A., Gottwald, T., Parnell, S. R., Alonso Chavez, V. and Vandenbosch, F. 2020. What makes or breaks a campaign to stop an invading plant pathogen? PLOS Computational Biology. 16 (2), p. e1007570. https://doi.org/10.1371/journal.pcbi.1007570

Species matter when considering landscape effects on carabid distributions

A - Papers appearing in refereed journals

Jowett, K., Milne, A. E., Metcalfe, H., Hassall, K. L., Potts, S. G., Senapathi, D. and Storkey, J. 2019. Species matter when considering landscape effects on carabid distributions. Agriculture, Ecosystems & Environment. 285 (2019), p. 106631. https://doi.org/10.1016/j.agee.2019.106631

Multi-objective optimization as a tool to identify possibilities for future agricultural landscapes

A - Papers appearing in refereed journals

Todman, L. C., Coleman, K., Milne, A. E., Gil, J. D. B., Reidsma, P., Schwoob, M-H., Treyer, S. and Whitmore, A. P. 2019. Multi-objective optimization as a tool to identify possibilities for future agricultural landscapes. Science of the Total Environment. 687 (15 October), pp. 535-545. https://doi.org/10.1016/j.scitotenv.2019.06.070

Facilitating the elicitation of beliefs for use in Bayesian Belief modelling

A - Papers appearing in refereed journals

Hassall, K. L., Dailey, A. G., Zawadzka, J., Milne, A. E., Harris, J. A., Corstanje, R. and Whitmore, A. P. 2019. Facilitating the elicitation of beliefs for use in Bayesian Belief modelling. Environmental Modelling and Software. 122, p. 104539. https://doi.org/10.1016/j.envsoft.2019.104539

Accounting for data sparsity when forming spatially coherent zones

A - Papers appearing in refereed journals

Hassall, K. L., Whitmore, A. P. and Milne, A. E. 2019. Accounting for data sparsity when forming spatially coherent zones. Applied Mathematical Modelling. 72 (August), pp. 537-552. https://doi.org/10.1016/j.apm.2019.03.030

Modelling the effect of spatially variable soil properties on the distribution of weeds

A - Papers appearing in refereed journals

Metcalfe, H., Milne, A. E., Coleman, K., Murdoch, A. J. and Storkey, J. 2019. Modelling the effect of spatially variable soil properties on the distribution of weeds. Ecological Modelling. 396 (24 March), pp. 1-11. https://doi.org/10.1016/j.ecolmodel.2018.11.002

The relationships between seedling root screens, root growth in the field and grain yield for wheat

A - Papers appearing in refereed journals

Bai, C., Ge, Y., Ashton, R. W., Evans, J., Milne, A. E., Hawkesford, M. J., Whalley, W. R., Parry, M. A. J., Melichar, J., Feuerhelm, D., Bansept, P. and Bartsch, M. 2019. The relationships between seedling root screens, root growth in the field and grain yield for wheat . Plant and Soil. https://doi.org/10.1007/s11104-019-04088-9

Valuing Improvements in Biodiversity Due to Controls on Atmospheric Nitrogen Pollution

A - Papers appearing in refereed journals

Jones, L., Milne, A. E., Hall, J., Mills, G., Provins, A. and Christie, M. 2018. Valuing Improvements in Biodiversity Due to Controls on Atmospheric Nitrogen Pollution. Ecological Economics. 152, pp. 358-366. https://doi.org/10.1016/j.ecolecon.2018.06.010

Growers’ risk perception and trust in control options for huanglongbing citrus-disease in Florida and California

A - Papers appearing in refereed journals

Milne, A., Teiken, C., Deledalle, F., Vandenbosch, F., Gottwalk, T. and McRoberts, N. 2018. Growers’ risk perception and trust in control options for huanglongbing citrus-disease in Florida and California. Crop Protection. 114, pp. 177-186. https://doi.org/10.1016/j.cropro.2018.08.028

Spatial Analysis of Digital Imagery of Weeds in a Maize Crop

A - Papers appearing in refereed journals

San-Martin-Hernandez, C., Milne, A. E., Webster, R., Storkey, J., Andujar, D., Fernandez-Quintanilla, C. and Dorado, J. 2018. Spatial Analysis of Digital Imagery of Weeds in a Maize Crop. ISPRS International Journal of Geo-Information. 7 (2), pp. 61-81. https://doi.org/10.3390/ijgi7020061

Defining the habitat niche of Alopecurus myosuroides at the field scale

A - Papers appearing in refereed journals

Metcalfe, H., Milne, A. E., Webster, R., Lark, R. M., Murdoch, A. J., Kanelo, L. and Storkey, J. 2018. Defining the habitat niche of Alopecurus myosuroides at the field scale. Weed Research. 58 (3), pp. 165-176. https://doi.org/10.1111/wre.12300

Does variable soil pH have an effect on the within-field distribution of A. Myosuroides?

A - Papers appearing in refereed journals

Metcalfe, H., Milne, A. E., Murdoch, A. J. and Storkey, J. 2017. Does variable soil pH have an effect on the within-field distribution of A. Myosuroides? Aspects of Applied Biology. 134, pp. 145-150.

The landscape model: A model for exploring trade-offs between agricultural production and the environment

A - Papers appearing in refereed journals

Coleman, K., Muhammed, S. E., Milne, A. E., Todman, L. C., Dailey, A. G., Glendining, M. J. and Whitmore, A. P. 2017. The landscape model: A model for exploring trade-offs between agricultural production and the environment. Science of the Total Environment. 609 (Supplement C), pp. 1483-1499. https://doi.org/10.1016/j.scitotenv.2017.07.193

Assessing sampling designs for determining fertilizer practice from yield data

A - Papers appearing in refereed journals

Muhammed, S. E., Marchant, B. P., Webster, R., Whitmore, A. P., Dailey, A. G. and Milne, A. E. 2017. Assessing sampling designs for determining fertilizer practice from yield data. Computers and Electronics in Agriculture. 135 (1 April), pp. 163-174. https://doi.org/10.1016/j.compag.2017.02.002

The implications of spatially variable pre-emergence herbicide efficacy for weed management.

A - Papers appearing in refereed journals

Metcalfe, H., Milne, A., Hull, R. I. C., Murdoch, A. J. and Storkey, J. 2017. The implications of spatially variable pre-emergence herbicide efficacy for weed management. Pest Management Science. 74 (3), pp. 755-765. https://doi.org/10.1002/ps.4784

Automating nitrogen fertiliser management for cereals (Auto-N). AHDB Project Report No.561

D1 - Technical reports: non-confidential

Kindred, D. R., Hatley, D., Ginsburg, D., Catalayud, A., Storer, K., Wilson, L., Hockridge, B., Milne, A. E., Marchant, B. P., Miller, P. and Sylvester-Bradley, R. 2016. Automating nitrogen fertiliser management for cereals (Auto-N). AHDB Project Report No.561. Agriculture and Horticulture Development Board.

Boundary line analysis of the effect of water-filled pore space on nitrous oxide emission from cores of arable soil

A - Papers appearing in refereed journals

Lark, R. M. and Milne, A. E. 2016. Boundary line analysis of the effect of water-filled pore space on nitrous oxide emission from cores of arable soil. European Journal of Soil Science. 67 (2), pp. 148-159. https://doi.org/10.1111/ejss.12318

Designing a sampling scheme to reveal correlations between weeds and soil properties at multiple spatial scales

A - Papers appearing in refereed journals

Metcalfe, H., Milne, A. E., Webster, R., Lark, R. M., Murdoch, A. J. and Storkey, J. 2016. Designing a sampling scheme to reveal correlations between weeds and soil properties at multiple spatial scales. Weed Research. 56 (1), pp. 1-13. https://doi.org/10.1111/wre.12184

The effect of farmers' decisions on pest control with Bt crops: a billion dollar game of strategy

A - Papers appearing in refereed journals

Milne, A. E., Bell, J. R., Hutchison, W. D., Van Den Bosch, F., Mitchell, P. D., Crowder, D., Parnell, S. and Whitmore, A. P. 2015. The effect of farmers' decisions on pest control with Bt crops: a billion dollar game of strategy. PLOS Computational Biology. 11, p. e1004483. https://doi.org/10.1371/journal.pcbi.1004483

Guidelines for measuring and reporting environmental parameters for experiments in greenhouses

A - Papers appearing in refereed journals

Both, A. J., Benjamin, L. R., Franklin, J. F., Holroyd, G., Incoll, L. D., Lefsrud, M. G. and Pitkin, G. 2015. Guidelines for measuring and reporting environmental parameters for experiments in greenhouses. Plant Methods. 11, p. 43. https://doi.org/10.1186/s13007-015-0083-5

Communicating the uncertainty in estimated greenhouse gas emissions from agriculture

A - Papers appearing in refereed journals

Milne, A. E., Glendining, M. J., Lark, R. M., Perryman, S. A. M., Gordon, T. and Whitmore, A. P. 2015. Communicating the uncertainty in estimated greenhouse gas emissions from agriculture. Journal of Environmental Management. 160, pp. 139-153. https://doi.org/10.1016/j.jenvman.2015.05.034

Exploring the spatial variation in the fertilizer-nitrogen requirement of wheat within fields

A - Papers appearing in refereed journals

Kindred, D. R., Milne, A. E., Webster, R., Marchant, B. P. and Sylvester-Bradley, R. 2015. Exploring the spatial variation in the fertilizer-nitrogen requirement of wheat within fields. The Journal of Agricultural Science. 153 (1), pp. 25-41. https://doi.org/10.1017/S0021859613000919

Exploiting yield maps and soil management zones

A - Papers appearing in refereed journals

Muhammed, S. E., Milne, A. E., Marchant, B. P., Griffin, S. and Whitmore, A. P. 2014. Exploiting yield maps and soil management zones. Proceedings of the International Fertiliser Society. 22, p. poster.

Understanding the scale-dependence of the relations between soil conditions and weed density and the implications for precision management of weeds

A - Papers appearing in refereed journals

Metcalfe, H., Milne, A. E., Murdoch, A., Webster, R., Lark, R. M. and Storkey, J. 2014. Understanding the scale-dependence of the relations between soil conditions and weed density and the implications for precision management of weeds. Aspects of Applied Biology. 127, pp. 165-171.

Exploiting yield maps and soil management zones

G - Articles in popular magazines and other technical publications

Milne, A. E., Marchant, B. P., Whitmore, A. P. and Muhammed, S. E. 2014. Exploiting yield maps and soil management zones. Landmark. 19, pp. 3-4.

Detecting land use and land management influences on catchment hydrology by modelling and wavelets

A - Papers appearing in refereed journals

Rust, W., Corstanje, R., Holman, I. P. and Milne, A. E. 2014. Detecting land use and land management influences on catchment hydrology by modelling and wavelets. Journal of Hydrology. 517, pp. 378-389. https://doi.org/10.1016/j.jhydrol.2014.05.052

Analysis of uncertainties in the estimates of nitrous oxide and methane emissions in the UK's greenhouse gas inventory for agriculture

A - Papers appearing in refereed journals

Milne, A. E., Glendining, M. J., Bellamy, P., Misselbrook, T. H., Gilhespy, S. L., Rivas Casado, M., Hulin, A., Van Oijen, M. and Whitmore, A. P. 2014. Analysis of uncertainties in the estimates of nitrous oxide and methane emissions in the UK's greenhouse gas inventory for agriculture. Atmospheric Environment. 82, pp. 94-105. https://doi.org/10.1016/j.atmosenv.2013.10.012

Spatial analysis of gilgai patterns

G - Articles in popular magazines and other technical publications

Webster, R., Milne, A. E. and Lark, R. M. 2013. Spatial analysis of gilgai patterns. Pedometron. 33, pp. 4-9.

Wavelet analysis of the variability of nitrous oxide emissions from soil at decameter to kilometer scales

A - Papers appearing in refereed journals

Milne, A. E., Haskard, K. A., Webster, C. P., Truan, I. A., Goulding, K. W. T. and Lark, R. M. 2013. Wavelet analysis of the variability of nitrous oxide emissions from soil at decameter to kilometer scales. Journal of Environmental Quality. 42, pp. 1070-1079. https://doi.org/10.2134/jeq2012.0007

Using the NAG library to help analyse the variation in data from the environment

G - Articles in popular magazines and other technical publications

Milne, A. E. and Lark, R. M. 2012. Using the NAG library to help analyse the variation in data from the environment. NAG News. 110, p. http://www.nag.co.uk/IndustryArticles/nag_for_environment_research.pdf.

Putting the brakes on a cycle: bottom-up effects damp cycle amplitude

A - Papers appearing in refereed journals

Bell, J. R., Burkness, E. C., Milne, A. E., Onstad, D. W., Abrahamson, M., Hamilton, K. L. and Hutchison, W. D. 2012. Putting the brakes on a cycle: bottom-up effects damp cycle amplitude. Ecology Letters. 15 (4), pp. 310-318. https://doi.org/10.1111/j.1461-0248.2011.01739.x

Spatial multivariate classification of an arable field into compact management zones based on past crop yields

A - Papers appearing in refereed journals

Milne, A. E., Webster, R., Ginsburg, D. and Kindred, D. 2012. Spatial multivariate classification of an arable field into compact management zones based on past crop yields. Computers and Electronics in Agriculture. 80, pp. 17-30. https://doi.org/10.1016/j.compag.2011.10.007

Exploring the variation in soil saturated hydraulic conductivity under a tropical rainforest using the wavelet transform

A - Papers appearing in refereed journals

Hassler, S. K., Lark, R. M., Milne, A. E. and Elsenbeer, H. 2011. Exploring the variation in soil saturated hydraulic conductivity under a tropical rainforest using the wavelet transform. European Journal of Soil Science. 62 (6), pp. 891-901. https://doi.org/10.1111/j.1365-2389.2011.01400.x

Wavelet analysis of soil variation at nanometre- to micrometre-scales: an example of organic carbon content in a micro-aggregate

A - Papers appearing in refereed journals

Milne, A. E., Lehmann, J., Solomon, D. and Lark, R. M. 2011. Wavelet analysis of soil variation at nanometre- to micrometre-scales: an example of organic carbon content in a micro-aggregate. European Journal of Soil Science. 62 (4), pp. 617-628. https://doi.org/10.1111/j.1365-2389.2011.01352.x

Wavelet analysis of the correlations between soil properties and potential nitrous oxide emission at farm and landscape scales

A - Papers appearing in refereed journals

Milne, A. E., Haskard, K. A., Webster, C. P., Truan, I. A., Goulding, K. W. T. and Lark, R. M. 2011. Wavelet analysis of the correlations between soil properties and potential nitrous oxide emission at farm and landscape scales. European Journal of Soil Science. 62 (3), pp. 467-478. https://doi.org/10.1111/j.1365-2389.2011.01361.x

Investigating the effect of previous treatments on wheat biomass over multiple spatial frequencies

A - Papers appearing in refereed journals

Milne, A. E., Castellanos, M. T., Cartagena, M. C., Tarquis, A. M. and Lark, R. M. 2010. Investigating the effect of previous treatments on wheat biomass over multiple spatial frequencies. Biogeosciences. 7, pp. 2739-2747. https://doi.org/10.5194/bg-7-2739-2010

A model to simulate yield losses in winter wheat caused by weeds, for use in a weed management decision support system

A - Papers appearing in refereed journals

Benjamin, L. R., Milne, A. E., Parsons, D. J. and Lutman, P. J. W. 2010. A model to simulate yield losses in winter wheat caused by weeds, for use in a weed management decision support system. Crop Protection. 29, pp. 1264-1273. https://doi.org/10.1016/j.cropro.2010.07.015

Spectral and wavelet analysis of gilgai patterns from air photography

A - Papers appearing in refereed journals

Milne, A. E., Webster, R. and Lark, R. M. 2010. Spectral and wavelet analysis of gilgai patterns from air photography. Australian journal of soil research. 48, pp. 309-325. https://doi.org/10.1071/SR09189

The wavelet packet transform: a technique for investigating temporal variation of river water solutes

A - Papers appearing in refereed journals

Milne, A. E., Macleod, C. J. A., Haygarth, P. M., Hawkins, J. M. B. and Lark, R. M. 2009. The wavelet packet transform: a technique for investigating temporal variation of river water solutes. Journal of Hydrology. 379 (1-2), pp. 1-19. https://doi.org/10.1016/j.jhydrol.2009.09.038

Wavelet transforms applied to irregularly sampled soil data

A - Papers appearing in refereed journals

Milne, A. E. and Lark, R. M. 2009. Wavelet transforms applied to irregularly sampled soil data. Mathematical geosciences. 41, pp. 661-678. https://doi.org/10.1007/s11004-009-9234-4

Using stochastic dynamic programming to support weed management decisions over a rotation

A - Papers appearing in refereed journals

Benjamin, L. R., Milne, A. E., Parsons, D. J., Cussans, J. and Lutman, P. J. W. 2009. Using stochastic dynamic programming to support weed management decisions over a rotation. Weed Research. 49 (2), pp. 207-216. https://doi.org/10.1111/j.1365-3180.2008.00678.x

A model of the effect of fungicides on disease-induced yield loss, for use in wheat disease management decision support systems

A - Papers appearing in refereed journals

Milne, A. E., Paveley, N., Audsley, E. and Parsons, D. 2007. A model of the effect of fungicides on disease-induced yield loss, for use in wheat disease management decision support systems. Annals of Applied Biology - AAB. 151 (1), pp. 113-125. https://doi.org/10.1111/j.1744-7348.2007.00158.x

The Conductance model of plant growth and competition in monoculture and species mixtures: a review

A - Papers appearing in refereed journals

Benjamin, L. R. and Park, S. E. 2007. The Conductance model of plant growth and competition in monoculture and species mixtures: a review. Weed Research. 47 (4), pp. 284-298. https://doi.org/10.1111/j.1365-3180.2007.00569.x

A new method to estimate boundary models for biological datasets

C2 - Non-edited contributions to conferences

Milne, A. E. and Lark, R. M. 2006. A new method to estimate boundary models for biological datasets. Cambridge University Press (CUP). https://doi.org/10.1017/S0021859606006290

Using a process model and regression kriging to improve predictions of nitrous oxide emissions from soil

A - Papers appearing in refereed journals

Stacey, K. F., Lark, R. M., Whitmore, A. P. and Milne, A. E. 2006. Using a process model and regression kriging to improve predictions of nitrous oxide emissions from soil. Geoderma. 135, pp. 107-117. https://doi.org/10.1016/j.geoderma.2005.11.008

Quality assurance from the auditor's point of view

C2 - Non-edited contributions to conferences

Benjamin, L. R. 2006. Quality assurance from the auditor's point of view. Abstracts UK Controlled Environment Users' Group 2006 Scientific Meeting: Quality Assurance - When the Inspector Calls, London, 12-13 September 2006 . pp. http://www.ceug.ac.uk/documents/Proceedings-06-acro.pdf

On testing biological data for the presence of a boundary

A - Papers appearing in refereed journals

Milne, A. E., Wheeler, H. C. and Lark, R. M. 2006. On testing biological data for the presence of a boundary. Annals of Applied Biology - AAB. 149 (2), pp. 213-222. https://doi.org/10.1111/j.1744-7348.2006.00085.x

Estimating a boundary line model for a biological response by maximum likelihood

A - Papers appearing in refereed journals

Milne, A. E., Ferguson, R. B. and Lark, R. M. 2006. Estimating a boundary line model for a biological response by maximum likelihood. Annals of Applied Biology - AAB. 149 (2), pp. 223-234. https://doi.org/10.1111/j.1744-7348.2006.00086.x

Development and validation of 'weed management support system' (Weed Manager). HGCA project report no. 388

D1 - Technical reports: non-confidential

Tatnell, L. V., Clarke, J. H., Ginsburg, D., Lutman, P. J. W., Mayes, A., Benjamin, L. R., Parsons, D. J., Milne, A. E., Wilkinson, D. J. and Davies, D. H. K. 2006. Development and validation of 'weed management support system' (Weed Manager). HGCA project report no. 388. London Home Grown Cereals Authority (HGCA).

Using a competition model to quantify the optimal trade-off between machine vision capability and weed removal effectiveness

A - Papers appearing in refereed journals

Grundy, A. C., Onyango, C. M., Phelps, K., Reader, R. J., Marchant, J. A., Benjamin, L. R. and Mead, A. 2005. Using a competition model to quantify the optimal trade-off between machine vision capability and weed removal effectiveness. Weed Research. 45 (5), pp. 388-405. https://doi.org/10.1111/j.1365-3180.2005.00471.x

Wavelet analysis of the scale- and location-dependent correlation of modelled and measured nitrous oxide emissions from soil

A - Papers appearing in refereed journals

Milne, A. E., Lark, R. M., Addiscott, T. M., Goulding, K. W. T., Webster, C. P. and O'flaherty, S. 2005. Wavelet analysis of the scale- and location-dependent correlation of modelled and measured nitrous oxide emissions from soil. European Journal of Soil Science. 56 (1), pp. 3-17. https://doi.org/10.1111/j.1365-2389.2004.00650.x

A growth and competition model for a weed management decision support system (WMSS)

C2 - Non-edited contributions to conferences

Benjamin, L. R., Cussans, J. W., Storkey, J. and Lutman, P. J. W. 2004. A growth and competition model for a weed management decision support system (WMSS). Abstracts 4th International Weed Science Society Congress, Durban, 19-25 June 2004 . pp. 51

Scale- and location-dependent correlation of nitrous oxide emissions with soil properties: an analysis using wavelets

A - Papers appearing in refereed journals

Lark, R. M., Milne, A. E., Addiscott, T. M., Goulding, K. W. T., Webster, C. P. and O'flaherty, S. 2004. Scale- and location-dependent correlation of nitrous oxide emissions with soil properties: an analysis using wavelets. European Journal of Soil Science. 55 (3), pp. 611-627. https://doi.org/10.1111/j.1365-2389.2004.00620.x

Analysing spatially intermittent variation of nitrous oxide emissions from soil with wavelets and the implications for sampling

A - Papers appearing in refereed journals

Lark, R. M., Milne, A. E., Addiscott, T. M., Goulding, K. W. T., Webster, C. P. and O'flaherty, S. 2004. Analysing spatially intermittent variation of nitrous oxide emissions from soil with wavelets and the implications for sampling. European Journal of Soil Science. 55 (3), pp. 601-610. https://doi.org/10.1111/j.1365-2389.2004.00629.x

Providing a framework for improved management of weeds in arable systems - WMSS

C1 - Edited contributions to conferences/learned societies

Davies, D. H. K., Maskell, P., Collings, L. V., Ginsburg, D., Clarke, J. H., Milne, A. E., Benjamin, L. R., Mayes, A. and Lutman, P. J. W. 2004. Providing a framework for improved management of weeds in arable systems - WMSS. Proceedings Conference on Crop Protection in Northern Britain, Dundee, 24-25 February 2004 . pp. 195-200

Use of plant competition models to achieve an optimal balance between machine vision capability and weed treatment effectiveness

C2 - Non-edited contributions to conferences

Phelps, K., Reader, R. J., Onyango, C. M., Grundy, A. C., Marchant, J. A. and Benjamin, L. R. 2003. Use of plant competition models to achieve an optimal balance between machine vision capability and weed treatment effectiveness. Cambridge University Press (CUP).

The theory and application of plant competition models: an agronomic perspective

A - Papers appearing in refereed journals

Park, S. E., Benjamin, L. R. and Watkinson, A. R. 2003. The theory and application of plant competition models: an agronomic perspective. Annals of Botany. 92, pp. 741-748.

Forage potential of semi-leafless grain peas

A - Papers appearing in refereed journals

Koivisto, J. M., Benjamin, L. R., Lane, G. P. F. and Davies, W. P. 2003. Forage potential of semi-leafless grain peas. Grass and Forage Science. 58 (2), pp. 220-223. https://doi.org/10.1046/j.1365-2494.2003.00368.x

Weed population dynamics and its role in developing ecologically sustainable management systems

G - Articles in popular magazines and other technical publications

Lutman, P. J. W., Benjamin, L. R., Cussans, J. W. and Storkey, J. 2003. Weed population dynamics and its role in developing ecologically sustainable management systems. Rothamsted Research Annual Report. 2002-2003, pp. 25-27.

An evaluation of four crop:weed competition models using a common data set

A - Papers appearing in refereed journals

Deen, W., Cousens, R., Warringa, J., Bastiaans, L., Carberry, P., Rebel, K., Riha, S., Murphy, C., Benjamin, L. R., Cloughley, C., Cussans, J., Forcella, F., Hunt, T., Jamieson, P., Lindquist, J. and Wang, E. 2003. An evaluation of four crop:weed competition models using a common data set. Weed Research. 43 (2), pp. 116-129. https://doi.org/10.1046/j.1365-3180.2003.00323.x

WMSS: improving the precision and prediction of weed management strategies in winter dominant rotations

C1 - Edited contributions to conferences/learned societies

Collings, L. V., Ginsburg, D., Clarke, J. H., Milne, A. E., Parsons, D. J., Wilkinson, D. J., Benjamin, L. R., Mayes, A., Lutman, P. J. W. and Davies, D. H. K. 2003. WMSS: improving the precision and prediction of weed management strategies in winter dominant rotations. Proceedings BCPC International Congress - Crop Science and Technology, Glasgow, 10-12 November 2003 . pp. 229-232

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