The potential of integrative phenomics to harness underutilized crops for improving stress resilience
A - Papers appearing in refereed journals
Grosskinsky, D. K., Faure, J-D., Gibon, Y., Haslam, R. P., Usabel, B., Zanetti, F. and Jonak, C. 2023. The potential of integrative phenomics to harness underutilized crops for improving stress resilience. Frontiers in Plant Science. 2023 (14), p. 1216337. https://doi.org/10.3389/Fpls.2023.1216337
| Authors | Grosskinsky, D. K., Faure, J-D., Gibon, Y., Haslam, R. P., Usabel, B., Zanetti, F. and Jonak, C. |
|---|---|
| Abstract | The current agricultural and food system faces diverse and increasing challenges. These include feeding an ever-growing human population, expected to reach about 10 billion by 2050 combined with societal disruption, and the need to cope with the impact of climate change (FAO, 2022). Given that future environmental conditions will limit crop productivity (Zhao et al., 2017; Cooper et al., 2021) and the limited potential to continually increase the performance of staple crops by conventional breeding (Hickey et al., 2019), there is an urgent need to transform agricultural systems. |
| Keywords | Agriculture; Breeding; Climate Change Resilience; Crop Improvement; Neglected Crops; Phenomics; Sustainability |
| Year of Publication | 2023 |
| Journal | Frontiers in Plant Science |
| Journal citation | 2023 (14), p. 1216337 |
| Digital Object Identifier (DOI) | https://doi.org/10.3389/Fpls.2023.1216337 |
| Open access | Published as ‘gold’ (paid) open access |
| Funder | Biotechnology and Biological Sciences Research Council |
| European Union | |
| Funder project or code | Green Engineering |
| UNTWIST ( Uncover and promote tolerance to temperature and water stress in Camelina sativa | |
| Publisher's version | |
| Output status | Published |
| Publication dates | |
| Online | 20 Jun 2023 |
| Publication process dates | |
| Accepted | 08 Jun 2023 |
| Publisher | Frontiers Media SA |
| ISSN | 1664-462X |
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A - Papers appearing in refereed journals
Napier, J. A., Usher, S. L., Haslam, R. P., Ruiz-Lopez, N. and Sayanova, O. V. 2015. Transgenic plants as a sustainable, terrestrial source of fish oils. European Journal Of Lipid Science And Technology. 117 (9), pp. 1317-1324. https://doi.org/10.1002/ejlt.201400452
An alternative pathway for the effective production of the omega-3 long-chain polyunsaturates EPA and ETA in transgenic oilseeds
A - Papers appearing in refereed journals
Ruiz-Lopez, N., Haslam, R. P., Usher, S. L., Napier, J. A. and Sayanova, O. V. 2015. An alternative pathway for the effective production of the omega-3 long-chain polyunsaturates EPA and ETA in transgenic oilseeds. Plant Biotechnology Journal. 13 (9), pp. 1264-1275. https://doi.org/10.1111/pbi.12328
Modifying the lipid content and composition of plant seeds: engineering the production of LC-PUFA
A - Papers appearing in refereed journals
Ruiz-Lopez, N., Usher, S. L., Sayanova, O. V., Napier, J. A. and Haslam, R. P. 2015. Modifying the lipid content and composition of plant seeds: engineering the production of LC-PUFA. Applied Microbiology and Biotechnology. 99 (1), pp. 143-154. https://doi.org/10.1007/s00253-014-6217-2
Understanding and manipulating plant lipid composition: metabolic engineering leads the way
A - Papers appearing in refereed journals
Napier, J. A., Haslam, R. P., Beaudoin, F. and Cahoon, E. B. 2014. Understanding and manipulating plant lipid composition: metabolic engineering leads the way. Current Opinion in Plant Biology. 19, pp. 68-75. https://doi.org/10.1016/j.pbi.2014.04.001
Gene expression in plant lipid metabolism in Arabidopsis seedlings
A - Papers appearing in refereed journals
Hsiao, A-S., Haslam, R. P., Michaelson, L. V., Liao, P., Napier, J. A. and Chye, M-L. 2014. Gene expression in plant lipid metabolism in Arabidopsis seedlings. PLOS ONE. 9, p. e107372. https://doi.org/10.1371/journal.pone.0107372
Arabidopsis cytosolic acyl-CoA-binding proteins ACBP4, ACBP5 and ACBP6 have overlapping but distinct roles in seed development
A - Papers appearing in refereed journals
Hsiao, A-S., Haslam, R. P., Michaelson, L. V., Liao, P., Chen, Q-F., Sooriyaarachchi, S., Mowbray, S. L., Napier, J. A., Tanner, J. A. and Chye, M-L. 2014. Arabidopsis cytosolic acyl-CoA-binding proteins ACBP4, ACBP5 and ACBP6 have overlapping but distinct roles in seed development. Bioscience Reports. 34 (6), pp. 865-877. https://doi.org/10.1042/BSR20140139
Modifying fatty acid profiles through a new cytokinin-based plastid transformation system
A - Papers appearing in refereed journals
Dunne, A., Maple-Grodem, J., Gargano, D., Haslam, R. P., Napier, J. A., Chua, N-H., Russell, R. and Geir Moller, S. 2014. Modifying fatty acid profiles through a new cytokinin-based plastid transformation system. The Plant Journal. 80 (6), pp. 1131-1138. https://doi.org/10.1111/tpj.12684
Oleaginous crops as integrated production platforms for food, feed, fuel and renewable industrial feedstock
A - Papers appearing in refereed journals
Beaudoin, F., Sayanova, O. V., Haslam, R. P., Bancroft, I. and Napier, J. A. 2014. Oleaginous crops as integrated production platforms for food, feed, fuel and renewable industrial feedstock. OCL - Oilseeds and fats, Crops and Lipids. 21 (6), p. D606. https://doi.org/10.1051/ocl/2014042
The centenary of Annals of Applied Biology in 2014
A - Papers appearing in refereed journals
Azevedo, R. A., Lea, P. J., Leather, S. R., Mcnichol, J. W., Millman, C. A., Haslam, R. P. and Valkonen, J. P. T. 2014. The centenary of Annals of Applied Biology in 2014. Annals of Applied Biology - AAB. 164 (1), pp. 1-7. https://doi.org/10.1111/aab.12093
The utilization of the acyl-CoA and the involvement PDAT and DGAT in the biosynthesis of erucic acid-rich triacylglycerols in crambe seed oil
A - Papers appearing in refereed journals
Furmanek, T., Demski, K., Banas, W., Haslam, R. P., Napier, J. A., Stymne, S. and Banas, A. 2014. The utilization of the acyl-CoA and the involvement PDAT and DGAT in the biosynthesis of erucic acid-rich triacylglycerols in crambe seed oil. Lipids. 49, pp. 327-333. https://doi.org/10.1007/s11745-014-3886-7
Successful high-level accumulation of fish oil omega-3 long-chain polyunsaturated fatty acids in a transgenic oilseed crop
A - Papers appearing in refereed journals
Ruiz-Lopez, N., Haslam, R. P., Napier, J. A. and Sayanova, O. V. 2014. Successful high-level accumulation of fish oil omega-3 long-chain polyunsaturated fatty acids in a transgenic oilseed crop. The Plant Journal. 77 (2), pp. 198-208. https://doi.org/10.1111/tpj.12378
Metabolic engineering of Phaeodactylum tricornutum for the enhanced accumulation of omega-3 long chain polyunsaturated fatty acids
A - Papers appearing in refereed journals
Hamilton, M. L., Haslam, R. P., Napier, J. A. and Sayanova, O. V. 2014. Metabolic engineering of Phaeodactylum tricornutum for the enhanced accumulation of omega-3 long chain polyunsaturated fatty acids. Metabolic Engineering. 22, pp. 3-9. https://doi.org/10.1016/j.ymben.2013.12.003
Production Of Omega-3 Long Chain Polyunsaturated Fatty Acids (Patent CA 2869738 A1)
H2 - Patents applied for
Napier, J. A., Sayanova, O. V., Ruiz-Lopez, N. and Haslam, R. P. 2013. Production Of Omega-3 Long Chain Polyunsaturated Fatty Acids (Patent CA 2869738 A1). CA 2869738 A1
Production Of Omega-3 Long Chain Polyunsaturated Fatty Acids (Patent WO 2013/153404 A1)
H2 - Patents applied for
Napier, J. A., Sayanova, O. V., Ruiz-Lopez, N. and Haslam, R. P. 2013. Production Of Omega-3 Long Chain Polyunsaturated Fatty Acids (Patent WO 2013/153404 A1) . WO 2013/153404 A1
Acyltransferases And Uses Therof In Fatty Acid Production (Patent EP 2585603 A1)
H2 - Patents applied for
Senger Toralf, Marty, L., Stymne, S., Lindberg Yilmaz Jenny, Napier, J. A., Sayanova, O. V., Haslam, R. P. and Ruiz-Lopez, N. 2013. Acyltransferases And Uses Therof In Fatty Acid Production (Patent EP 2585603 A1) . EP 2585603 A1
Acyltransferases And Uses Thereof In Fatty Acid Production (Patent US 2013/0097733 A1)
H2 - Patents applied for
Senger, T., Marty, L., Stymne, S., Lindberg, Y. J., Napier, J. A., Sayanova, O. V., Haslam, R. P. and Ruiz-Lopez, N. 2013. Acyltransferases And Uses Thereof In Fatty Acid Production (Patent US 2013/0097733 A1) . US 2013/0097733 A1
Oil production in the extreme
G - Articles in popular magazines and other technical publications
Haslam, R. P. and Michaelson, L. V. 2013. Oil production in the extreme. Annals of Applied Biology - AAB. 163 (2), pp. 170-173. https://doi.org/10.1111/aab.12058
Involvement of Arabidopsis ACYL-COENZYME A DESATURASE-LIKE2 (At2g31360) in the biosynthesis of the very-long-chain monounsaturated fatty acid components of membrane lipids
A - Papers appearing in refereed journals
Smith, M. A., Dauk, M., Ramadan, H., Yang, H., Seamons, L. E., Haslam, R. P., Beaudoin, F., Ramirez-Erosa, I. and Forseille, L. 2013. Involvement of Arabidopsis ACYL-COENZYME A DESATURASE-LIKE2 (At2g31360) in the biosynthesis of the very-long-chain monounsaturated fatty acid components of membrane lipids. Plant Physiology. 161, pp. 81-96. https://doi.org/10.1104/pp.112.202325
Reconstitution of EPA and DHA biosynthesis in Arabidopsis: iterative metabolic engineering for the synthesis of n-3 LC-PUFAs in transgenic plants
A - Papers appearing in refereed journals
Ruiz-Lopez, N., Haslam, R. P., Usher, S. L., Napier, J. A. and Sayanova, O. V. 2013. Reconstitution of EPA and DHA biosynthesis in Arabidopsis: iterative metabolic engineering for the synthesis of n-3 LC-PUFAs in transgenic plants. Metabolic Engineering. 17, pp. 30-41. https://doi.org/10.1016/j.ymben.2013.03.001
The Arabidopsis cer26 mutant, like the cer2 mutant, is specifically affected in the very long chain fatty acid elongation process
A - Papers appearing in refereed journals
Pascal, S., Bernard, A., Sorel, M., Pervent, M., Vile, D., Haslam, R. P., Napier, J. A., Lessire, R., Domergue, F. and Joubes, J. 2013. The Arabidopsis cer26 mutant, like the cer2 mutant, is specifically affected in the very long chain fatty acid elongation process. The Plant Journal. 73 (5), pp. 733-746. https://doi.org/10.1111/tpj.12060
The modification of plant oil composition via metabolic engineering - better nutrition by design
A - Papers appearing in refereed journals
Haslam, R. P., Ruiz-Lopez, N., Eastmond, P. J., Moloney, M., Sayanova, O. V. and Napier, J. A. 2013. The modification of plant oil composition via metabolic engineering - better nutrition by design. Plant Biotechnology Journal. 11 (2), pp. 157-168. https://doi.org/10.1111/pbi.12012
Metabolic engineering of the omega-3 long chain polyunsaturated fatty acid biosynthetic pathway into transgenic plants
A - Papers appearing in refereed journals
Ruiz-Lopez, N., Sayanova, O. V., Napier, J. A. and Haslam, R. P. 2012. Metabolic engineering of the omega-3 long chain polyunsaturated fatty acid biosynthetic pathway into transgenic plants. Journal of Experimental Botany. 63, pp. 2397-2410. https://doi.org/10.1093/jxb/err454
Enhancing the accumulation of omega-3 long chain polyunsaturated fatty acids in transgenic Arabidopsis thaliana via iterative metabolic engineering and genetic crossing
A - Papers appearing in refereed journals
Ruiz-Lopez, N., Haslam, R. P., Venegas-Caleron, M., Li, T., Bauer, J., Napier, J. A. and Sayanova, O. V. 2012. Enhancing the accumulation of omega-3 long chain polyunsaturated fatty acids in transgenic Arabidopsis thaliana via iterative metabolic engineering and genetic crossing. Transgenic Research. 21, pp. 1233-1243. https://doi.org/10.1007/s11248-012-9596-0
Reconstitution of plant alkane biosynthesis in yeast demonstrates that Arabidopsis ECERIFERUM1 and ECERIFERUM3 are core components of a very-long-chain alkane synthesis complex
A - Papers appearing in refereed journals
Bernard, A., Domergue, F., Pascal, S., Jetter, R., Renne, C., Faure, J-D., Haslam, R. P., Napier, J. A., Lessire, R. and Joubes, J. 2012. Reconstitution of plant alkane biosynthesis in yeast demonstrates that Arabidopsis ECERIFERUM1 and ECERIFERUM3 are core components of a very-long-chain alkane synthesis complex. The Plant Cell. 24, pp. 3106-3118. https://doi.org/10.1105/tpc.112.099796
Feedback regulation of plastidic acetyl-CoA carboxylase by 18:1-acyl carrier protein in Brassica napus
A - Papers appearing in refereed journals
Andre, C., Haslam, R. P. and Shanklin, J. 2012. Feedback regulation of plastidic acetyl-CoA carboxylase by 18:1-acyl carrier protein in Brassica napus. Proceedings of the National Academy of Sciences. 109, pp. 10107-10112. https://doi.org/10.1073/pnas.1204604109
The role of delta6-desaturase acyl-carrier specificity in the efficient synthesis of long-chain polyunsaturated fatty acids in transgenic plants
A - Papers appearing in refereed journals
Sayanova, O. V., Ruiz-Lopez, N., Haslam, R. P. and Napier, J. A. 2012. The role of delta6-desaturase acyl-carrier specificity in the efficient synthesis of long-chain polyunsaturated fatty acids in transgenic plants. Plant Biotechnology Journal. 10 (2), pp. 195-206. https://doi.org/10.1111/j.1467-7652.2011.00653.x
Acyltransferases And Uses Therof In Fatty Acid Production (Patent CA 2804925 A1)
H2 - Patents applied for
Senger, T., Marty, L., Stymne, S., Lindberg, Y. J., Napier, J. A., Sayanova, O. V., Haslam, R. P. and Ruiz-Lopez, N. 2011. Acyltransferases And Uses Therof In Fatty Acid Production (Patent CA 2804925 A1) . CA 2804925 A1
Acyltransferases And Uses Therof In Fatty Acid Production (Patent WO 2011/161093 A1)
H2 - Patents applied for
Senger, T., Marty, L., Stymne, S., Lindberg, Y. J., Napier, J. A., Sayanova, O. V., Haslam, R. P. and Ruiz-Lopez, N. 2011. Acyltransferases And Uses Therof In Fatty Acid Production (Patent WO 2011/161093 A1). WO 2011/161093 A1
Targeted enhancement of glutamate-to-gamma-aminobutyrate conversion in Arabidopsis seeds affects carbon-nitrogen balance and storage reserves in a development-dependent manner
A - Papers appearing in refereed journals
Fait, A., Nunes Nesi, A., Angelovici, R., Lehmann, M., Anh Pham, P., Song, L., Haslam, R. P., Napier, J. A., Galili, G. and Fernie, A. R. 2011. Targeted enhancement of glutamate-to-gamma-aminobutyrate conversion in Arabidopsis seeds affects carbon-nitrogen balance and storage reserves in a development-dependent manner. Plant Physiology. 157, pp. 1026-1042. https://doi.org/10.1104/pp.111.179986
Overexpression of Arabidopsis ECERIFERUM1 promotes wax very-long-chain alkane biosynthesis and influences plant response to biotic and abiotic stresses
A - Papers appearing in refereed journals
Bourdenx, B., Bernard, A., Domergue, F., Pascal, S., Leger, A., Roby, D., Pervent, M., Vile, D., Haslam, R. P., Napier, J. A., Lessire, R. and Joubes, J. 2011. Overexpression of Arabidopsis ECERIFERUM1 promotes wax very-long-chain alkane biosynthesis and influences plant response to biotic and abiotic stresses. Plant Physiology. 156, pp. 29-45. https://doi.org/10.1104/pp.111.172320
Metabolic engineering of Saccharomyces cerevisiae for production of eicosapentaenoic acid, using a novel delta5-desaturase from Paramecium tetraurelia
A - Papers appearing in refereed journals
Tavares, S., Grotkjaer, T., Obsen, T., Haslam, R. P., Napier, J. A. and Gunnarsson, N. 2011. Metabolic engineering of Saccharomyces cerevisiae for production of eicosapentaenoic acid, using a novel delta5-desaturase from Paramecium tetraurelia. Applied and Environmental Microbiology. 77, pp. 1854-1861. https://doi.org/10.1128/AEM.01935-10
Identification and functional characterisation of genes encoding the omega-3 polyunsaturated fatty acid biosynthetic pathway from the coccolithophore Emiliania huxleyi
A - Papers appearing in refereed journals
Sayanova, O. V., Haslam, R. P., Venegas Caleron, M., Ruiz-Lopez, N., Worthy, C., Rooks, P., Allen, M. J. and Napier, J. A. 2011. Identification and functional characterisation of genes encoding the omega-3 polyunsaturated fatty acid biosynthetic pathway from the coccolithophore Emiliania huxleyi. Phytochemistry. 72, pp. 594-600. https://doi.org/10.1016/j.phytochem.2011.01.022
ELVOVL2 controls the level of n-6 28:5 and 30:5 fatty acids in testis, a prerequisite for male fertility and sperm maturation in mice
A - Papers appearing in refereed journals
Zadravec, D., Tvrdik, P., Guillou, H., Haslam, R. P., Kobayashi, T., Napier, J. A., Capecchi, M. R. and Jacobsson, A. 2011. ELVOVL2 controls the level of n-6 28:5 and 30:5 fatty acids in testis, a prerequisite for male fertility and sperm maturation in mice. Journal Of Lipid Research. 52 (2), pp. 245-255. https://doi.org/10.1194/jlr.M011346
The production of Omega-3 Very Long-Chain Polyunsaturated Fatty Acids in transgenic plants: a sustainable source of omega-3 fish oils
C2 - Non-edited contributions to conferences
Ruiz-Lopez, N., Haslam, R. P., Sayanova, O. V. and Napier, J. A. 2010. The production of Omega-3 Very Long-Chain Polyunsaturated Fatty Acids in transgenic plants: a sustainable source of omega-3 fish oils. Abstracts from the 51st International Conference on the Bioscience of Lipids. https://doi.org/10.1016/j.chemphyslip.2010.05.055
Very-long-chain fatty acids are involved in polar auxin transport and developmental patterning in Arabidopsis
A - Papers appearing in refereed journals
Roudier, F., Gissot, L., Beaudoin, F., Haslam, R. P., Michaelson, L. V., Marion, J., Molino, D., Lima, A., Bach, L., Morin, H., Tellier, F., Palauqui, J-C., Bellec, Y., Renne, C., Miquel, M., Dacosta, M., Vignard, J., Rochat, C., Markham, J. E., Moreau, P., Napier, J. A. and Faure, J-D. 2010. Very-long-chain fatty acids are involved in polar auxin transport and developmental patterning in Arabidopsis. The Plant Cell. 22, pp. 364-375. https://doi.org/10.1105/tpc.109.071209
As simple as ACB - new insights into the role of acyl-CoA-binding proteins in Arabidopsis
A - Papers appearing in refereed journals
Napier, J. A. and Haslam, R. P. 2010. As simple as ACB - new insights into the role of acyl-CoA-binding proteins in Arabidopsis. New Phytologist. 186 (4), pp. 781-783. https://doi.org/10.1111/j.1469-8137.2010.03287.x
Misexpression of FATTY ACID ELONGATION1 in the Arabidopsis Epidermis Induces Cell Death and Suggests a Critical Role for Phospholipase A2 in This Process
A - Papers appearing in refereed journals
Reina-Pinto, J. J., Voisin, D., Kurdyukov, S., Faust, A., Haslam, R. P., Michaelson, L. V., Efremova, N., Franke, B., Schreiber, L., Napier, J. A. and Yephremov, A. 2009. Misexpression of FATTY ACID ELONGATION1 in the Arabidopsis Epidermis Induces Cell Death and Suggests a Critical Role for Phospholipase A2 in This Process. The Plant Cell. 21 (4), pp. 1252-1272. https://doi.org/10.1105/tpc.109.065565
The synthesis and accumulation of stearidonic acid in transgenic plants: a novel source of 'heart-healthy' omega-3 fatty acids
A - Papers appearing in refereed journals
Ruiz-Lopez, N., Haslam, R. P., Venegas-Caleron, M., Larson, T. R., Graham, I. A., Napier, J. A. and Sayanova, O. V. 2009. The synthesis and accumulation of stearidonic acid in transgenic plants: a novel source of 'heart-healthy' omega-3 fatty acids. Plant Biotechnology Journal. 7 (7), pp. 704-716. https://doi.org/10.1111/j.1467-7652.2009.00436.x
Functional characterization of the Arabidopsis beta-ketoacyl-coenzyme A reductase candidates of the fatty acid elongase
A - Papers appearing in refereed journals
Beaudoin, F., Wu, X., Li, F., Haslam, R. P., Markham, J. E., Zheng, H., Napier, J. A. and Kunst, L. 2009. Functional characterization of the Arabidopsis beta-ketoacyl-coenzyme A reductase candidates of the fatty acid elongase. Plant Physiology. 150, pp. 1174-1191. https://doi.org/10.1104/pp.109.137497
Functional characterization of a higher plant sphingolipid delta4-desaturase: defining the role of sphingosine and sphingosine-1-phosphate in Arabidopsis
A - Papers appearing in refereed journals
Michaelson, L. V., Zauner, S., Markham, J. E., Haslam, R. P., Desikan, R., Mugford, S., Albrecht, S., Warnecke, D., Sperling, P., Heinz, E. and Napier, J. A. 2009. Functional characterization of a higher plant sphingolipid delta4-desaturase: defining the role of sphingosine and sphingosine-1-phosphate in Arabidopsis. Plant Physiology. 149, pp. 487-498. https://doi.org/10.1104/pp.108.129411
Peroxisomal ATP import is essential for seedling development in Arabidopsis thaliana
A - Papers appearing in refereed journals
Linka, N., Theodoulou, F. L., Haslam, R. P., Linka, M., Napier, J. A., Neuhaus, H. E. and Weber, A. P. M. 2008. Peroxisomal ATP import is essential for seedling development in Arabidopsis thaliana. The Plant Cell. 20, pp. 3241-3257. https://doi.org/10.1105/tpc.108.062042
The very-long-chain hydroxy fatty acyl-CoA dehydratase PASTICCINO2 is essential and limiting for plant development
A - Papers appearing in refereed journals
Bach, L., Michaelson, L. V., Haslam, R. P., Bellec, Y., Gissot, L., Marion, J., Da Costa, M., Boutin, J-P., Miquel, M., Tellier, F., Domergue, F., Markham, J. E., Beaudoin, F., Napier, J. A. and Faure, J-D. 2008. The very-long-chain hydroxy fatty acyl-CoA dehydratase PASTICCINO2 is essential and limiting for plant development. Proceedings of the National Academy of Sciences. 105, pp. 14727-14731. https://doi.org/10.1073/pnas.0805089105
Cloning and characterization of unusual fatty acid desaturases from Anemone leveillei: identification of an acyl-coenzyme A C20 delta5-desaturase responsible for the synthesis of sciadonic acid
A - Papers appearing in refereed journals
Sayanova, O. V., Haslam, R. P., Venegas Caleron, M. and Napier, J. A. 2007. Cloning and characterization of unusual fatty acid desaturases from Anemone leveillei: identification of an acyl-coenzyme A C20 delta5-desaturase responsible for the synthesis of sciadonic acid. Plant Physiology. 144, pp. 455-467. https://doi.org/10.1104/pp.107.098202
A bifunctional delta12, delta15-desaturase from Acanthamoeba castellanii directs the synthesis of highly unusual n -1 series unsaturated fatty acids
A - Papers appearing in refereed journals
Sayanova, O. V., Haslam, R. P., Guschina, I., Lloyd, D., Christie, W. W., Harwood, J. L. and Napier, J. A. 2006. A bifunctional delta12, delta15-desaturase from Acanthamoeba castellanii directs the synthesis of highly unusual n -1 series unsaturated fatty acids. Journal of Biological Chemistry. 281, pp. 36533-36541. https://doi.org/10.1074/jbc.M605158200
Identification of Primula "front-end" desaturases with distinct n -6 or n -3 substrate preferences
A - Papers appearing in refereed journals
Sayanova, O. V., Haslam, R. P., Venegas-Caleron, M. and Napier, J. A. 2006. Identification of Primula "front-end" desaturases with distinct n -6 or n -3 substrate preferences. Planta. 224, pp. 1269-1277. https://doi.org/10.1007/s00425-006-0306-0
The alternative pathway C20 delta8-desaturase from the non-photosynthetic organism Acanthamoeba castellanii is an atypical cytochrome b5 -fusion desaturase
A - Papers appearing in refereed journals
Sayanova, O. V., Haslam, R. P., Qi, B., Lazarus, C. M. and Napier, J. A. 2006. The alternative pathway C20 delta8-desaturase from the non-photosynthetic organism Acanthamoeba castellanii is an atypical cytochrome b5 -fusion desaturase. FEBS Letters. 580 (8), pp. 1946-1952. https://doi.org/10.1016/j.febslet.2006.02.062
Progress towards the production of very long-chain polyunsaturated fatty acid in transgenic plants: plant metabolic engineering comes of age
A - Papers appearing in refereed journals
Napier, J. A., Haslam, R. P., Venegas Caleron, M., Michaelson, L. V., Beaudoin, F. and Sayanova, O. V. 2006. Progress towards the production of very long-chain polyunsaturated fatty acid in transgenic plants: plant metabolic engineering comes of age. Physiologia Plantarum. 126 (3), pp. 398-406. https://doi.org/10.1111/j.1399-3054.2005.00603.x
Specificity of diatom Rubisco
B - Book chapters etc edited externally
Haslam, R. P., Keys, A. J., Andralojc, P. J., Madgwick, P. J., Andersson, I., Grimsrud, A., Eilertsen, H. C. and Parry, M. A. J. 2005. Specificity of diatom Rubisco. in: Dekok, L. J., Omasa, K. and Nouchi, I. (ed.) Plant responses to air pollution and global change Springer, Tokyo. pp. 157-164
Environmental and ecological aspects of CO2 assimilation
C2 - Non-edited contributions to conferences
Parry, M. A. J., Keys, A. J., Madgwick, P. J., Haslam, R. P., Galmes, J., Medrano, H. and Flexas, J. 2005. Environmental and ecological aspects of CO2 assimilation. Abstracts 17th International Botanical Comgress, Vienna, 17-23 July 2005 . pp. 173
Transcriptomics and proteomics: tools for optimising phytoremediation activities
A - Papers appearing in refereed journals
Coleman, J. O. D., Haslam, R. P. and Downie, A. L. 2005. Transcriptomics and proteomics: tools for optimising phytoremediation activities. Zeitschrift fur Naturforschung C - A Journal of Biosciences. 60, pp. 544-548.
Rubisco specificity factor tends to be larger in plant species from drier habitats and in species with persistent leaves
A - Papers appearing in refereed journals
Galmes, J., Flexas, J., Keys, A. J., Cifre, J., Mitchell, R. A. C., Madgwick, P. J., Haslam, R. P., Medrano, H. and Parry, M. A. J. 2005. Rubisco specificity factor tends to be larger in plant species from drier habitats and in species with persistent leaves. Plant, Cell and Environment. 28 (5), pp. 571-579. https://doi.org/10.1111/j.1365-3040.2005.01300.x
Expression profiling of the response of Arabidopsis thaliana to methanol stimulation
A - Papers appearing in refereed journals
Downie, A. L., Miyazaki, S., Bohnert, H., John, P., Coleman, J., Parry, M. A. J. and Haslam, R. P. 2004. Expression profiling of the response of Arabidopsis thaliana to methanol stimulation. Phytochemistry. 65 (16), pp. 2305-2316. https://doi.org/10.1016/j.phytochem.2004.07.006
Limonium gibertii mRNA for ribulose 1,5 bisphosphate carboxylase/oxygenase large subunit (rbcL gene)
K - Protein or DNA sequences submitted to database
Galmes, J., Flexas, J., Keys, A. J., Cifre, J., Mitchell, R. A. C., Madgwick, P. J., Haslam, R. P., Medrano, H. and Parry, M. A. J. 2004. Limonium gibertii mRNA for ribulose 1,5 bisphosphate carboxylase/oxygenase large subunit (rbcL gene).
Limonium gibertii partial mRNA for ribulose 1,5 bisphosphate carboxylase/oxygenase small subunit (rbcS2 gene)
K - Protein or DNA sequences submitted to database
Galmes, J., Flexas, J., Keys, A. J., Cifre, J., Mitchell, R. A. C., Madgwick, P. J., Haslam, R. P., Medrano, H. and Parry, M. A. J. 2004. Limonium gibertii partial mRNA for ribulose 1,5 bisphosphate carboxylase/oxygenase small subunit (rbcS2 gene).
Limonium gibertii partial mRNA for ribulose 1,5 bisphosphate carboxylase/oxygenase small subunit (rbcS1 gene)
K - Protein or DNA sequences submitted to database
Galmes, J., Flexas, J., Keys, A. J., Cifre, J., Mitchell, R. A. C., Madgwick, P. J., Haslam, R. P., Medrano, H. and Parry, M. A. J. 2004. Limonium gibertii partial mRNA for ribulose 1,5 bisphosphate carboxylase/oxygenase small subunit (rbcS1 gene).
Physiological responses of the CAM epiphyte Tillandsia usneoides L. (Bromeliaceae) to variations in light and water supply
A - Papers appearing in refereed journals
Haslam, R. P., Borland, A., Maxwell, K. and Griffiths, H. 2003. Physiological responses of the CAM epiphyte Tillandsia usneoides L. (Bromeliaceae) to variations in light and water supply. Journal of Plant Physiology. 160, pp. 627-634.
Characterisation of the glutathione-dependent formaldehyde detoxification pathway in Arabidopsis, wheat and rice
C2 - Non-edited contributions to conferences
Haslam, R. P., Downie, A. L., John, P., Parry, M. A. J., Cole, D., Pallett, K. and Coleman, J. O. D. 2003. Characterisation of the glutathione-dependent formaldehyde detoxification pathway in Arabidopsis, wheat and rice. Society for Experimental Biology Annual Main Meeting: 31st March–4th April 2002, Southampton, UK . https://doi.org/10.1016/S1095-6433(03)00034-5
A focus on the fascinating world of one-carbon metabolism
C2 - Non-edited contributions to conferences
Downie, A. L., Haslam, R. P., John, P., Parry, M. A. J., Cole, D., Pallett, K. and Coleman, J. O. D. 2003. A focus on the fascinating world of one-carbon metabolism. Society for Experimental Biology Annual Main Meeting: 31st March–4th April 2002, Southampton, UK . https://doi.org/10.1016/S1095-6433(03)00034-5
Global expression profiling of the response of chemically regulated genes in Arabidopsis
C2 - Non-edited contributions to conferences
Downie, A. L., Haslam, R. P., Miyazaki, S., Bohnert, H. J., John, P., Parry, M. A. J. and Coleman, J. O. D. 2003. Global expression profiling of the response of chemically regulated genes in Arabidopsis. Abstracts COST 837 Achievement and Prospects of Phytoremediation in Europe: Final Scientific Workshop and Management Committee Meeting, Vienna, 15-18 October 2003 .
Global expression profiling of the response of chemically regulated genes in Arabidopsis
C2 - Non-edited contributions to conferences
Haslam, R. P., Downie, A. L., Miyazaki, S., Bohnert, H. J., John, P., Coleman, J. O. D. and Parry, M. A. J. 2003. Global expression profiling of the response of chemically regulated genes in Arabidopsis. Abstracts ASPB Annual Meeting Plant Biology 2003, Honolulu, 25-30 July 2003 . pp. Abs 1358
An assessment of enriched apoplastic extracts by proteomic analysis
C2 - Non-edited contributions to conferences
Haslam, R. P., Downie, A. L., Raveton, M., Gallardo, K., Job, D., Pallett, K. E., John, P., Parry, M. A. J. and Coleman, J. O. D. 2003. An assessment of enriched apoplastic extracts by proteomic analysis. Abstracts COST 837 Achievement and Prospects of Phytoremediation in Europe: Final Scientific Workshop and Management Committee Meeting, Vienna, 15-18 October 2003 .
The assessment of enriched apoplastic extracts using proteomic approaches
A - Papers appearing in refereed journals
Haslam, R. P., Downie, A. J., Raveton, M., Gallardo, K., Job, D., Pallett, K. E., John, P., Parry, M. A. J. and Coleman, J. O. D. 2003. The assessment of enriched apoplastic extracts using proteomic approaches. Annals of Applied Biology - AAB. 143 (1), pp. 81-91. https://doi.org/10.1111/j.1744-7348.2003.tb00272.x
Short-term plasticity of crassulacean acid metabolism expression in the epiphytic bromeliad, Tillandsia usneoides
A - Papers appearing in refereed journals
Haslam, R. P., Borland, A. M. and Griffiths, H. 2002. Short-term plasticity of crassulacean acid metabolism expression in the epiphytic bromeliad, Tillandsia usneoides. Functional Plant Biology. 29 (6), pp. 749-756. https://doi.org/10.1071/PP01214
Cloning and characterisation of S -formylglutathione hydrolase from Arabidopsis thaliana : a pathway for formaldehyde detoxification
A - Papers appearing in refereed journals
Haslam, R. P., Rust, S., Pallett, K., Cole, D. and Coleman, J. O. D. 2002. Cloning and characterisation of S -formylglutathione hydrolase from Arabidopsis thaliana : a pathway for formaldehyde detoxification. Plant Physiology and Biochemistry. 40, pp. 281-288.
Regulation of rubisco activity in crassulacean acid metabolism plants: better late than never
A - Papers appearing in refereed journals
Griffiths, H., Helliker, B., Roberts, A., Haslam, R. P., Girnus, J., Robe, W. E., Borland, A. M. and Maxwell, K. 2002. Regulation of rubisco activity in crassulacean acid metabolism plants: better late than never. Functional Plant Biology. 29 (6), pp. 689-696. https://doi.org/10.1071/PP01212
Crassulacean acid metabolism: plastic, fantastic
A - Papers appearing in refereed journals
Dodd, A. N., Borland, A. M., Haslam, R. P., Griffiths, H. and Maxwell, K. 2002. Crassulacean acid metabolism: plastic, fantastic. Journal of Experimental Botany. 53, pp. 569-580.
Addressing proteomic approaches in phytoremediation
C2 - Non-edited contributions to conferences
Haslam, R. P., Gallardo, K., Job, D. and Coleman, J. O. D. 2001. Addressing proteomic approaches in phytoremediation. Abstracts COST 837 Working Group 3 Meeting on Genomic Approaches within the COST 837 Action, Montpellier, 30 November-1 December 2001 .
Identification of xenobiotic metabolising proteins from rice using proteomic approaches
C2 - Non-edited contributions to conferences
Downie, A. L., Haslam, R. P., Gallardo, K., Job, D. and Coleman, J. O. D. 2001. Identification of xenobiotic metabolising proteins from rice using proteomic approaches. Abstracts COST 837 Working Group 3 Meeting on Genomic Approaches within the COST 837 Action, Montpellier, 30 November-1 December 2001 .
Isolation and characterisation of carboxylesterases involved in xenobiotic metabolism in rice
C1 - Edited contributions to conferences/learned societies
Downie, A. L., Cole, D. J., Haslam, R. P., Coleman, J. O. D. and John, P. 2001. Isolation and characterisation of carboxylesterases involved in xenobiotic metabolism in rice. Proceedings Brighton Crop Protection Conference - Weeds, 2001 . pp. 337-340
Cloning and expression of S-formylglutathione hydrolase (FGH) from Arabidopsis : a pathway for formaldehyde detoxification?
C2 - Non-edited contributions to conferences
Haslam, R. P., Cole, D. J., Pallet, K. E. and Coleman, J. O. D. 2001. Cloning and expression of S-formylglutathione hydrolase (FGH) from Arabidopsis : a pathway for formaldehyde detoxification? Abstracts European Science Foundation Workshop on Adaptation of Plant Populations to Environmental Insult, Newcastle, 27-30 July 2001 .
The identification and properties of apoplastic carboxylesterases from wheat that catalyse deesterification of herbicides
A - Papers appearing in refereed journals
Haslam, R. P., Raveton, M., Cole, D. J., Pallett, K. E. and Coleman, J. O. D. 2001. The identification and properties of apoplastic carboxylesterases from wheat that catalyse deesterification of herbicides. Pesticide Biochemistry and Physiology. 71, pp. 178-189.
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