The Plant Cell

Journal

Title	The Plant Cell
Alternative	Plant Cell
ISSN	1532-298X
Publisher	American Society of Plant Biologists (ASPB)
Notes	ISSN on journal homepage incorrect

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A GAL4-like protein is involved in the switch between biotrophic and necrotrophic phases of the infection process of Colletotrichum lindemuthianum on common bean

A - Papers appearing in refereed journals

Dufresne, M., Perfect, S., Pellier, A. L., Bailey, J. A. and Langin, I. 2000. A GAL4-like protein is involved in the switch between biotrophic and necrotrophic phases of the infection process of Colletotrichum lindemuthianum on common bean. The Plant Cell. 12, pp. 1579-1589.

A metabolic gene cluster in the wheat W1 and the barley Cer-cqu loci determines beta-diketone biosynthesis and glaucousness

A - Papers appearing in refereed journals

Hen-Avivi, S., Savin, O., Racovita, R. C., Lee, W-S., Adamski, N. M., Malitsky, S., Almekias-Siegl, E., Levy, M., Vautrin, S., Berges, H., Friedlander, G., Kartvelishvily, E., Ben-Zvi, G., Alkan, N., Uauy, C., Kanyuka, K., Jetter, R., Distelfeld, A. and Aharoni, A. 2016. A metabolic gene cluster in the wheat W1 and the barley Cer-cqu loci determines beta-diketone biosynthesis and glaucousness. The Plant Cell. 28 (6), pp. 1440-1460. https://doi.org/10.1105/tpc.16.00197

Abnormal glycosphingolipid mannosylation triggers salicylic acid-mediated responses in Arabidopsis

A - Papers appearing in refereed journals

Mortimer, J. C., Yu, X., Albrecht, S., Sicilia, F., Huichalaf, M., Ampuero, D., Michaelson, L. V., Murphy, A. M., Matsunaga, T., Kurz, S., Stephens, E., Baldwin, T. C., Ishii, T., Napier, J. A., Weber, A. P. M., Handford, M. G. and Dupree, P. 2013. Abnormal glycosphingolipid mannosylation triggers salicylic acid-mediated responses in Arabidopsis. The Plant Cell. 25, pp. 1881-1894. https://doi.org/10.1105/tpc.113.111500

Analysis of the developmental roles of the Arabidopsis gibberellin 20-oxidases demonstrates that GA20ox1, -2 and -3 are the dominant paralogs

A - Papers appearing in refereed journals

Plackett, A. R. G., Powers, S. J., Fernandez-Garcia, N., Urbanova, T., Takebayashi, Y., Seo, M., Jikumaru, Y., Benlloch, R., Nilsson, O., Ruiz-Rivero, O., Phillips, A. L., Wilson, Z. A., Thomas, S. G. and Hedden, P. 2012. Analysis of the developmental roles of the Arabidopsis gibberellin 20-oxidases demonstrates that GA20ox1, -2 and -3 are the dominant paralogs. The Plant Cell. 24, pp. 941-960. https://doi.org/10.1105/tpc.111.095109

Antagonistic Transcription Factor Complexes Modulate the Floral Transition in Rice

A - Papers appearing in refereed journals

Brambilla, V., Martignago, D., Goretti, D., Cerise, M., Somssich, M., de Rosa, M., Galbiati, F., Shrestha, R., Lazzaro, F., Simon, R. and Fornara, F. 2017. Antagonistic Transcription Factor Complexes Modulate the Floral Transition in Rice. The Plant Cell. 29 (11), pp. 2801-2816. https://doi.org/10.1105/tpc.17.00645

Basic LEUCINE ZIPPER TRANSCRIPTION FACTOR 67 transactivates DELAY OF GERMINATION 1 to establish primary seed dormancy in Arabidopsis

A - Papers appearing in refereed journals

Bryant, F. M., Hughes, D. J., Hassani-Pak, K. and Eastmond, P. J. 2019. Basic LEUCINE ZIPPER TRANSCRIPTION FACTOR 67 transactivates DELAY OF GERMINATION 1 to establish primary seed dormancy in Arabidopsis. The Plant Cell. https://doi.org/10.1105/tpc.18.00892

BIG enhances Arg/N-degron pathway-mediated protein degradation to regulate Arabidopsis hypoxia responses and suberin deposition

A - Papers appearing in refereed journals

Zhang, H., Rundle, C., Winter, N., Miricescu, A., Mooney B. C., Bachmair, A., Graciet, E. and Theodoulou, F. L. 2024. BIG enhances Arg/N-degron pathway-mediated protein degradation to regulate Arabidopsis hypoxia responses and suberin deposition. The Plant Cell. p. koae117. https://doi.org/10.1093/plcell/koae117

Biosynthesis of very-long-chain polyunsaturated fatty acids in transgenic oilseeds: constraints on their accumulation

A - Papers appearing in refereed journals

Abbadi, A., Domergue, F., Bauer, J., Napier, J. A., Welti, R., Zahringer, U., Cirpus, P. and Heinz, E. 2004. Biosynthesis of very-long-chain polyunsaturated fatty acids in transgenic oilseeds: constraints on their accumulation. The Plant Cell. 16, pp. 2734-2748.

bZIP67 regulates the omega-3 fatty acid content of Arabidopsis seed oil by activating FATTY ACID DESATURASE3

A - Papers appearing in refereed journals

Mendes, A., Kelly, A. A., Van-Erp, H., Shaw, E., Powers, S. J., Kurup, S. and Eastmond, P. J. 2013. bZIP67 regulates the omega-3 fatty acid content of Arabidopsis seed oil by activating FATTY ACID DESATURASE3. The Plant Cell. 25, pp. 3104-3116. https://doi.org/10.1105/tpc.113.116343

Characterization of a NADH-dependent glutamate dehydrogenase mutant of Arabidopsis demonstrates the key role of this enzyme in root carbon and nitrogen metabolism

A - Papers appearing in refereed journals

Fontaine, J-X., Terce-Laforgue, T., Armengaud, P., Clement, G., Renou, J-P., Pelletier, S., Catterou, M., Azzopardi, M., Gibon, Y., Lea, P. J., Hirel, B. and Dubois, F. 2012. Characterization of a NADH-dependent glutamate dehydrogenase mutant of Arabidopsis demonstrates the key role of this enzyme in root carbon and nitrogen metabolism. The Plant Cell. 24, pp. 4044-4065. https://doi.org/10.1105/tpc.112.103689

CLAVATA1 dominant-negative alleles reveal functional overlap between multiple receptor kinases that regulate meristem and organ development

A - Papers appearing in refereed journals

Dievert, A., Dalal, M., Tax, F. E., Lacey, A. D., Huttly, A. K., Li, J. and Clark, S. E. 2003. CLAVATA1 dominant-negative alleles reveal functional overlap between multiple receptor kinases that regulate meristem and organ development. The Plant Cell. 15 (5), pp. 1198-1211. https://doi.org/10.1105/tpc.010504

Climate change challenges, plant science solutions

A - Papers appearing in refereed journals

Eckardt, N., Ainsworth, E., Bahuguna, R., Broadley, M., Busch, W., Carpita, N., Castrillo, G., Chory, J., DeHaan, L., Duarte, C., Henry, A., Krishna Jagadish, S., Langdale, J., Leakey, A., Liao, J., Lu, K., McCann, M., McKay, J., Odeny, D., De Oliveira, E., Platten, J., Rabbi, I., Rim, E. Y., Ronald, P., Salt, D., Shigenaga, A., Wang. E., Wolfe, M. and Zhang, X. 2023. Climate change challenges, plant science solutions. The Plant Cell. 35 (1), pp. 24 - 66. https://doi.org/10.1093/plcell/koac303

Genetic analysis reveals that C19-GA 2-oxidation is a major gibberellin inactivation pathway in Arabidopsis

A - Papers appearing in refereed journals

Rieu, I., Eriksson, S., Powers, S. J., Gong, F., Griffiths, J., Woolley, L., Benlloch, R., Nilsson, O., Thomas, S. G., Hedden, P. and Phillips, A. L. 2008. Genetic analysis reveals that C19-GA 2-oxidation is a major gibberellin inactivation pathway in Arabidopsis. The Plant Cell. 20, pp. 2420-2436. https://doi.org/10.1105/tpc.108.058818

Genetic characterization and functional analysis of the GID1 gibberellin receptors in Arabidopsis

A - Papers appearing in refereed journals

Griffiths, J., Murase, K., Rieu, I., Zentella, R., Zhang, Z-L., Powers, S. J., Gong, F., Phillips, A. L., Hedden, P., Sun, T-P. and Thomas, S. G. 2006. Genetic characterization and functional analysis of the GID1 gibberellin receptors in Arabidopsis. The Plant Cell. 18 (12), pp. 3399-3414. https://doi.org/10.1105/tpc.106.047415

Genetic interactions during root hair morphogenesis in Arabidopsis

A - Papers appearing in refereed journals

Parker, J. S., Cavell, A. C., Dolan, L., Roberts, K. and Grierson, C. S. 2000. Genetic interactions during root hair morphogenesis in Arabidopsis. The Plant Cell. 12, pp. 1961-1974.

Genetical and comparative genomics of Brassica under altered Ca supply identifies Arabidopsis Ca-transporter orthologs

A - Papers appearing in refereed journals

Graham, N. S., Hammond, J. P., Lysenko, A., Mayes, S., O Lochlainn, S., Blasco, B., Bowen, H. C., Rawlings, C. J., Rios, J. J., Welham, S. J., Carion, P. W. C., Dupuy, L. X., King, G. J., White, P. J. and Broadley, M. R. 2014. Genetical and comparative genomics of Brassica under altered Ca supply identifies Arabidopsis Ca-transporter orthologs. The Plant Cell. 26, pp. 2818-2830. https://doi.org/10.1105/tpc.114.128603

Lack of respiratory chain complex 1 impairs alternative oxidase engagement and modulates redox signaling during elicitor-induced cell death in tobacco

A - Papers appearing in refereed journals

Vidal, G., Ribas-Carbo, M., Garmier, M., Dubertret, G., Rasmusson, A. G., Mathieu, C., Foyer, C. H. and De Paepe, R. 2007. Lack of respiratory chain complex 1 impairs alternative oxidase engagement and modulates redox signaling during elicitor-induced cell death in tobacco. The Plant Cell. 19, pp. 640-655. https://doi.org/10.1105/tpc.106.044461

Leaf mitochondria modulate whole leaf redox homeostasis, set antioxidant capacity, and determine stress resistance through altered signaling and diurnal regulation

A - Papers appearing in refereed journals

Dutilleul, C., Garmier, M., Noctor, G., Mathieu, C., Chetrit, P., Foyer, C. H. and De Paepe, R. 2003. Leaf mitochondria modulate whole leaf redox homeostasis, set antioxidant capacity, and determine stress resistance through altered signaling and diurnal regulation. The Plant Cell. 15, pp. 1212-1226.

Leaf vitamin C contents modulate plant defense transcripts and regulate genes that control development through hormone signaling

A - Papers appearing in refereed journals

Pastori, G. M., Kiddle, G., Antoniw, J. F., Bernard, S. M., Veljovic-Jovanovic, S., Verrier, P. J., Noctor, G. and Foyer, C. H. 2003. Leaf vitamin C contents modulate plant defense transcripts and regulate genes that control development through hormone signaling. The Plant Cell. 15 (4), pp. 939-951. https://doi.org/10.1105/tpc.010538

Leaf-induced gibberellin signaling is essential for internode elongation, cambial activity and fiber differentiation in tobacco stems

A - Papers appearing in refereed journals

Dayan, J., Voronin, N., Gong, F., Sun, T-P., Hedden, P., Fromm, H. and Aloni, R. 2012. Leaf-induced gibberellin signaling is essential for internode elongation, cambial activity and fiber differentiation in tobacco stems. The Plant Cell. 24, pp. 66-79. https://doi.org/10.1105/tpc.111.093096

Misexpression of FATTY ACID ELONGATION1 in the Arabidopsis Epidermis Induces Cell Death and Suggests a Critical Role for Phospholipase A2 in This Process

A - Papers appearing in refereed journals

Reina-Pinto, J. J., Voisin, D., Kurdyukov, S., Faust, A., Haslam, R. P., Michaelson, L. V., Efremova, N., Franke, B., Schreiber, L., Napier, J. A. and Yephremov, A. 2009. Misexpression of FATTY ACID ELONGATION1 in the Arabidopsis Epidermis Induces Cell Death and Suggests a Critical Role for Phospholipase A2 in This Process. The Plant Cell. 21 (4), pp. 1252-1272. https://doi.org/10.1105/tpc.109.065565

Newly imported rieske iron-sulfur protein associates with both Cpn60 and Hsp70 in the chloroplast stroma

A - Papers appearing in refereed journals

Madueno, F., Napier, J. A. and Gray, J. C. 1993. Newly imported rieske iron-sulfur protein associates with both Cpn60 and Hsp70 in the chloroplast stroma. The Plant Cell. 5 (12), pp. 1865-1876. https://doi.org/10.1105/tpc.5.12.1865

Nuclear factors interact with conserved A/T-rich elements upstream of a nodule-enhanced glutamine synthetase gene from French bean.

A - Papers appearing in refereed journals

Forde, B. G., Freeman, J., Oliver, J. E. and Pineda, M. 1990. Nuclear factors interact with conserved A/T-rich elements upstream of a nodule-enhanced glutamine synthetase gene from French bean. The Plant Cell. 2, pp. 925-939. https://doi.org/10.1105/tpc.2.9.925

Peroxisomal ATP import is essential for seedling development in Arabidopsis thaliana

A - Papers appearing in refereed journals

Linka, N., Theodoulou, F. L., Haslam, R. P., Linka, M., Napier, J. A., Neuhaus, H. E. and Weber, A. P. M. 2008. Peroxisomal ATP import is essential for seedling development in Arabidopsis thaliana. The Plant Cell. 20, pp. 3241-3257. https://doi.org/10.1105/tpc.108.062042

PHOSPHATIDIC ACID PHOSPHOHYDROLASE regulates phosphatidylcholine biosynthesis in Arabidopsis by phosphatidic acid-mediated activation of CTP: PHOSPHOCHOLINE CYTIDYLYLTRANSFERASE activity

A - Papers appearing in refereed journals

Craddock, C. P., Adams, N., Bryant, F. M., Kurup, S. and Eastmond, P. J. 2015. PHOSPHATIDIC ACID PHOSPHOHYDROLASE regulates phosphatidylcholine biosynthesis in Arabidopsis by phosphatidic acid-mediated activation of CTP: PHOSPHOCHOLINE CYTIDYLYLTRANSFERASE activity. The Plant Cell. 27, pp. 1251-1264. https://doi.org/10.1105/tpc.15.00037

Plant metabolomics: the missing link in functional genomics strategies

A - Papers appearing in refereed journals

Hall, R., Beale, M. H., Fiehn, O., Hardy, N., Sumner, N. and Bino, R. 2002. Plant metabolomics: the missing link in functional genomics strategies. The Plant Cell. 14, pp. 1437-1440. https://doi.org/10.1105/tpc.140720

Real-time quantitative RT-PCR: design, calculations and statistics

A - Papers appearing in refereed journals

Rieu, I. and Powers, S. J. 2009. Real-time quantitative RT-PCR: design, calculations and statistics. The Plant Cell. 21, pp. 1031-1033. https://doi.org/10.1105/tpc.109.066001

Reconstitution of plant alkane biosynthesis in yeast demonstrates that Arabidopsis ECERIFERUM1 and ECERIFERUM3 are core components of a very-long-chain alkane synthesis complex

A - Papers appearing in refereed journals

Bernard, A., Domergue, F., Pascal, S., Jetter, R., Renne, C., Faure, J-D., Haslam, R. P., Napier, J. A., Lessire, R. and Joubes, J. 2012. Reconstitution of plant alkane biosynthesis in yeast demonstrates that Arabidopsis ECERIFERUM1 and ECERIFERUM3 are core components of a very-long-chain alkane synthesis complex. The Plant Cell. 24, pp. 3106-3118. https://doi.org/10.1105/tpc.112.099796

Redox homeostasis and antioxidant signaling: a metabolic interface between stress perception and physiological responses

A - Papers appearing in refereed journals

Foyer, C. H. and Noctor, G. 2005. Redox homeostasis and antioxidant signaling: a metabolic interface between stress perception and physiological responses. The Plant Cell. 17 (7), pp. 1866-1875. https://doi.org/10.1105/tpc.105.033589

Seed storage proteins: structures and biosynthesis

A - Papers appearing in refereed journals

Shewry, P. R., Napier, J. A. and Tatham, A. S. 1995. Seed storage proteins: structures and biosynthesis. The Plant Cell. 7 (7), pp. 945-956. https://doi.org/10.1105/tpc.7.7.945

Synaptotagmins at the endoplasmic reticulum–plasma membrane contact sites maintain diacylglycerol homeostasis during abiotic stress

A - Papers appearing in refereed journals

Ruiz-Lopez, N., Perez-Sancho, J., Del Valle, A. E., Haslam, R. P., Vanneste, S., Catala, R., Perea-Resa, C., Van Damme, D., Garcia-Hernandez, S., Albert A., Vallarino, J., Lin, J., Friml, J., Macho, A. P., Salinas, J., Rosado, A., Napier, J. A., Amorim-Silva, V. and Botella, M. A. 2021. Synaptotagmins at the endoplasmic reticulum–plasma membrane contact sites maintain diacylglycerol homeostasis during abiotic stress. The Plant Cell. 33 (7), p. 2431–2453. https://doi.org/10.1093/plcell/koab122

The Arabidopsis ATNRT2.7 nitrate transporter controls nitrate content in seeds

A - Papers appearing in refereed journals

Chopin, F., Orsel, M., Dorbe, M-F., Chardon, F., Truong, H-N., Miller, A. J., Krapp, A. and Daniel-Vedele, F. 2007. The Arabidopsis ATNRT2.7 nitrate transporter controls nitrate content in seeds. The Plant Cell. 19, pp. 1590-1602. https://doi.org/10.1105/tpc.107.050542

The Arabidopsis F-box protein SLEEPY1 targets gibberellin signaling repressors for gibberellin-induced degradation

A - Papers appearing in refereed journals

Dill, A., Thomas, S. G., Hu, J., Steber, C. M. and Sun, T-P. 2004. The Arabidopsis F-box protein SLEEPY1 targets gibberellin signaling repressors for gibberellin-induced degradation. The Plant Cell. 16, pp. 1392-1405.

The cold-inducible CBF1 factor-dependent signaling pathway modulates the accumulation of the growth-repressing DELLA proteins via its effect on gibberellin metabolism

A - Papers appearing in refereed journals

Achard, P., Gong, F., Cheminant, S., Alioua, M., Hedden, P. and Genschik, P. 2008. The cold-inducible CBF1 factor-dependent signaling pathway modulates the accumulation of the growth-repressing DELLA proteins via its effect on gibberellin metabolism. The Plant Cell. 20, pp. 2117-2129. https://doi.org/10.1105/tpc.108.058941

The POLARIS peptide of Arabidopsis regulates auxin transport and root growth via effects on ethylene signaling

A - Papers appearing in refereed journals

Chilley, P. M., Casson, S. A., Tarkowski, P., Hawkins, N. D., Wang, K. L-C., Hussey, P. J., Beale, M. H., Ecker, J. R., Sandberg, G. J. and Lindsey, K. 2006. The POLARIS peptide of Arabidopsis regulates auxin transport and root growth via effects on ethylene signaling. The Plant Cell. 18, pp. 3058-3072. https://doi.org/10.1105/tpc.106.040790

The transcription factor ABI4 is required for the ascorbic acid-dependent regulation of growth and regulation of jasmonate-dependent defense signaling pathways in Arabidopsis

A - Papers appearing in refereed journals

Kerchev, P. I., Pellny, T. K., Vivancos, P. D., Kiddle, G., Hedden, P., Driscoll, S. P., Vanacker, H., Verrier, P. J., Hancock, R. D. and Foyer, C. H. 2011. The transcription factor ABI4 is required for the ascorbic acid-dependent regulation of growth and regulation of jasmonate-dependent defense signaling pathways in Arabidopsis. The Plant Cell. 23, pp. 3319-3334. https://doi.org/10.1105/tpc.111.090100

Time-Series Transcriptomics Reveals That AGAMOUS-LIKE22 Affects Primary Metabolism and Developmental Processes in Drought-Stressed Arabidopsis

A - Papers appearing in refereed journals

Bechtold, U., Penfold, C. A., Jenkins, D. J., Legaie, R., Moore, J. D., Lawson, T., Matthews, J. S. A., Vialet-Chabrand, S. R. M., Baxter, L., Subramaniam, S., Hickman, R., Florance, H., Sambles, C., Salmon, D. L., Feil, R., Bowden, L., Hill, C., Baker, N. R., Lunn, J. E., Finkenstadt, B., Mead, A., Buchanan-Wollaston, V., Beynon, J., Rand, D. A., Wild, D. L., Denby, K. J., Ott, S., Smirnoff, N. and Mullineaux, P. M. 2016. Time-Series Transcriptomics Reveals That AGAMOUS-LIKE22 Affects Primary Metabolism and Developmental Processes in Drought-Stressed Arabidopsis. The Plant Cell. 28 (2), pp. 345-366. https://doi.org/10.1105/tpc.15.00910

Transcriptional dynamics driving MAMP-triggered immunity and pathogen effector-mediated immunosuppression in Arabidopsis leaves following infection with Pseudomonas synringae pv tomato DC3000

A - Papers appearing in refereed journals

Lewis, L. A., Polanski, K., De Torres-Zabala, M., Jayaraman, S., Bowden, L., Moore, J., Penford, C. A., Jenkins, D. J., Hill, C., Baxter, L., Kulasekaran, S., Truman, W., Littlejohn, G., Prusinska, J., Mead, A., Steinbrenner, J., Hickman, R., Rand, D., Wild, D. L., Ott, S., Buchanan-Wollaston, V., Smirnoff, N., Beynon, J., Denby, K. and Grant, M. 2015. Transcriptional dynamics driving MAMP-triggered immunity and pathogen effector-mediated immunosuppression in Arabidopsis leaves following infection with Pseudomonas synringae pv tomato DC3000. The Plant Cell. 27, pp. 3038-3064. https://doi.org/10.1105/tpc.15.00471

Two cytosolic glutamine synthetase isoforms of maize are specifically involved in the control of grain production

A - Papers appearing in refereed journals

Martin, A., Lee, J., Kichey, T., Gerentes, D., Zivy, M., Tatout, C., Dubois, F., Balliau, T., Valot, B., Davanture, M., Terce-Laforgue, T., Quillere, I., Coque, M., Gallais, A., Gonzalez-Moro, M-B., Bethencourt, L., Habash, D. Z. and Lea, P. J. 2006. Two cytosolic glutamine synthetase isoforms of maize are specifically involved in the control of grain production. The Plant Cell. 18, pp. 3252-3274. https://doi.org/10.1105/tpc.106.042689

Two glutamine synthetase genes from Phaseolus vulgaris L. display contrasting developmental and spatial patterns of expression in transgenic Lotus corniculatus plants.

A - Papers appearing in refereed journals

Forde, B. G., Day, H. M., Turton, J. F., Shen, Wen-Jun, Cullimore, J. V. and Oliver, J. E. 1989. Two glutamine synthetase genes from Phaseolus vulgaris L. display contrasting developmental and spatial patterns of expression in transgenic Lotus corniculatus plants. The Plant Cell. 1, pp. 391-401.