PS: Lipid Metabolic Engineering and Synthetic Biology

TitlePS: Lipid Metabolic Engineering and Synthetic Biology
TypeResearch cluster

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A bifunctional delta12, delta15-desaturase from Acanthamoeba castellanii directs the synthesis of highly unusual n -1 series unsaturated fatty acids

A - Papers appearing in refereed journals
Sayanova, O. V., Haslam, R. P., Guschina, I., Lloyd, D., Christie, W. W., Harwood, J. L. and Napier, J. A. 2006. A bifunctional delta12, delta15-desaturase from Acanthamoeba castellanii directs the synthesis of highly unusual n -1 series unsaturated fatty acids. Journal of Biological Chemistry. 281, pp. 36533-36541. https://doi.org/10.1074/jbc.M605158200

A Field Day for Gene-Edited Brassicas and Crop Improvement

A - Papers appearing in refereed journals
Napier, J. A. 2021. A Field Day for Gene-Edited Brassicas and Crop Improvement. The CRISPR Journal. 4 (3), pp. 307-312. https://doi.org/10.1089/crispr.2021.29130.kad

A focus on the fascinating world of one-carbon metabolism

C2 - Non-edited contributions to conferences
Downie, A. L., Haslam, R. P., John, P., Parry, M. A. J., Cole, D., Pallett, K. and Coleman, J. O. D. 2003. A focus on the fascinating world of one-carbon metabolism. Society for Experimental Biology Annual Main Meeting: 31st March–4th April 2002, Southampton, UK . https://doi.org/10.1016/S1095-6433(03)00034-5

A growing family of cytochrome b(5)-domain fusion proteins

A - Papers appearing in refereed journals
Napier, J. A., Sayanova, O. V., Sperling, P. and Heinz, E. 1999. A growing family of cytochrome b(5)-domain fusion proteins. Trends in Plant Science. 4 (1), pp. 2-4. https://doi.org/10.1016/s1360-1385(98)01357-0

A metabolomic study of substantial equivalence of field-grown genetically modified wheat

A - Papers appearing in refereed journals
Baker, J. M., Hawkins, N. D., Ward, J. L., Lovegrove, A., Napier, J. A., Shewry, P. R. and Beale, M. H. 2006. A metabolomic study of substantial equivalence of field-grown genetically modified wheat. Plant Biotechnology Journal. 4 (4), pp. 381-392. https://doi.org/10.1111/j.1467-7652.2006.00197.x

A new class of cytochrome b(5) fusion proteins

A - Papers appearing in refereed journals
Napier, J. A., Sayanova, O. V., Stobart, A. K. and Shewry, P. R. 1997. A new class of cytochrome b(5) fusion proteins. Biochemical Journal. 328 (2), pp. 717-720. https://doi.org/10.1042/bj3280717u

A new class of lipid desaturase central to sphingolipid biosynthesis and signalling

A - Papers appearing in refereed journals
Napier, J. A., Michaelson, L. V. and Dunn, T. M. 2002. A new class of lipid desaturase central to sphingolipid biosynthesis and signalling. Trends in Plant Science. 7, pp. 475-478.

A new class of lipid desaturases: identification of the delta4 sphingoid base desaturase

A - Papers appearing in refereed journals
Garton, S., Michaelson, L. V., Beaudoin, F. and Napier, J. A. 2002. A new class of lipid desaturases: identification of the delta4 sphingoid base desaturase. Biochemical Society Transactions. 30 (6), p. A122. https://doi.org/10.1042/bst030a122c

A new rapid and relatively inexpensive method for mining in plant germplasm collections for novel alleles of agronomically important genes: a case study in barley

C2 - Non-edited contributions to conferences
Hofinger, B. J., Bass, C., Baldwin, T., Jing, H-C., Beaudoin, F., Hammond-Kosack, K. E. and Kanyuka, K. 2009. A new rapid and relatively inexpensive method for mining in plant germplasm collections for novel alleles of agronomically important genes: a case study in barley. Abstracts 19th ITMI/3rd COST Tritigen Joint Workshop, Clermont-Ferrand, 31 August-4 September 2009 . pp. 34

A nutritionally-enhanced oil from transgenic Camelina sativa effectively replaces fish oil as a source of eicosapentaenoic acid for fish

A - Papers appearing in refereed journals
Betancor, M. B., Sprague, M., Usher, S. L., Sayanova, O. V., Campbell, P. J., Napier, J. A. and Tocher, D. R. 2015. A nutritionally-enhanced oil from transgenic Camelina sativa effectively replaces fish oil as a source of eicosapentaenoic acid for fish. Scientific Reports. 5, p. 8104. https://doi.org/10.1038/srep08104

A Palmitic Acid Elongase Affects Eicosapentaenoic Acid and Plastidial Monogalactosyldiacylglycerol Levels in Nannochloropsis

A - Papers appearing in refereed journals
Dolch, L-J., Rak, C., Perin, G., Tourcier, G., Broughton, R., Leterrier, M., Morosinotto, T., Tellier, F., Faure, J-D., Falconet, D., Jouhet, J., Sayanova, O. V., Beaudoin, F. and Maréchal, E. 2017. A Palmitic Acid Elongase Affects Eicosapentaenoic Acid and Plastidial Monogalactosyldiacylglycerol Levels in Nannochloropsis. Plant Physiology. 173 (1), pp. 742-759. https://doi.org/10.1104/pp.16.01420

A point mutation in the kinase domain of CRK10 leads to xylem vessel collapse and activation of defence responses in Arabidopsis

A - Papers appearing in refereed journals
Piovesana, M., Wood, A. K. M., Smith, D. P., Deery, M. J., Bayliss, R., Carrera, E., Napier, J. A., Kurup, S. and Matthes, M. C. 2023. A point mutation in the kinase domain of CRK10 leads to xylem vessel collapse and activation of defence responses in Arabidopsis. Journal of Experimental Botany. 74 (10), pp. 3104-3121. https://doi.org/10.1093/jxb/erad080

A post-genomic approach to understanding sphingolipid metabolism in Arabidopsis thaliana

A - Papers appearing in refereed journals
Dunn, T. M., Lynch, D. V., Michaelson, L. V. and Napier, J. A. 2004. A post-genomic approach to understanding sphingolipid metabolism in Arabidopsis thaliana. Annals of Botany. 93, pp. 483-497.

A Saccharomyces cerevisiae gene required for heterologous fatty acid elongase activity encodes a microsomal beta-keto-reductase

A - Papers appearing in refereed journals
Beaudoin, F., Gable, K., Sayanova, O. V., Dunn, T. and Napier, J. A. 2002. A Saccharomyces cerevisiae gene required for heterologous fatty acid elongase activity encodes a microsomal beta-keto-reductase. Journal of Biological Chemistry. 277, pp. 11481-11488.

A transatlantic perspective on 20 emerging issues in biological engineering

A - Papers appearing in refereed journals
Wintle, B. C., Boehm, C. R., Rhodes, C., Molloy J. C., Millett, P., Adam, L., Breitling, R., Carlson, R., Casogrande, R., Dando, M., Doubleday, R., Drexler, E., Edwards, B., Ellis, T., Evans, N. G., Hammond, R., Haseloff, J., Kahl, L., Kuiken, T., Lichman, B. R., Matthewman, C. A., Napier, J. A., Oheigeartaigh, S. S., Patron, N. J., Perello, E., Shapira, P., Tail, J., Takano, E and Sutherland, W. J. 2017. A transatlantic perspective on 20 emerging issues in biological engineering. eLife. 6 (e30247). https://doi.org/10.7554/elife.30247

A transgenic Camelina sativa seed oil effectively replaces fish oil as a dietary source of eicosapentaenoic acid in mice

A - Papers appearing in refereed journals
Tejera, N., Vauzour, D., Betancor, M. B., Sayanova, O. V., Usher, S., Cochard, M., Rigby, N., Ruiz-Lopez, N., Menoyo, D., Tocher, D. R., Napier, J. A. and Minihane, A. M. 2016. A transgenic Camelina sativa seed oil effectively replaces fish oil as a dietary source of eicosapentaenoic acid in mice. Journal Of Nutrition. 146 (2), pp. 227-235. https://doi.org/10.3945/jn.115.223941

Abnormal glycosphingolipid mannosylation triggers salicylic acid-mediated responses in Arabidopsis

A - Papers appearing in refereed journals
Mortimer, J. C., Yu, X., Albrecht, S., Sicilia, F., Huichalaf, M., Ampuero, D., Michaelson, L. V., Murphy, A. M., Matsunaga, T., Kurz, S., Stephens, E., Baldwin, T. C., Ishii, T., Napier, J. A., Weber, A. P. M., Handford, M. G. and Dupree, P. 2013. Abnormal glycosphingolipid mannosylation triggers salicylic acid-mediated responses in Arabidopsis. The Plant Cell. 25, pp. 1881-1894. https://doi.org/10.1105/tpc.113.111500

Accumulation and deposition of triacylglycerols in the starchy endosperm of wheat grain

A - Papers appearing in refereed journals
Gonzalez-Thuillier, I., Pellny, T. K., Tosi, P., Mitchell, R. A. C., Haslam, R. P. and Shewry, P. R. 2021. Accumulation and deposition of triacylglycerols in the starchy endosperm of wheat grain. Journal of Cereal Science. 98, p. 103167. https://doi.org/10.1016/j.jcs.2021.103167

Accumulation of Delta(6)-unsaturated fatty acids in transgenic tobacco plants expressing a Delta(6)-desaturase from Borago officinalis

A - Papers appearing in refereed journals
Sayanova, O. V., Davies, G. M., Smith, M. A., Griffiths, G., Stobart, A. K., Shewry, P. R. and Napier, J. A. 1999. Accumulation of Delta(6)-unsaturated fatty acids in transgenic tobacco plants expressing a Delta(6)-desaturase from Borago officinalis. Journal of Experimental Botany. 50 (340), pp. 1647-1652. https://doi.org/10.1093/jxb/50.340.1647

ACYL-ACYL CARRIER PROTEIN DESATURASE2 and 3 are responsible for making omega-7 fatty acids in the Arabidopsis aleurone

A - Papers appearing in refereed journals
Bryant, F. M., Munoz-Azcarate, O., Kelly, A. A., Beaudoin, F., Kurup, S. and Eastmond, P. J. 2016. ACYL-ACYL CARRIER PROTEIN DESATURASE2 and 3 are responsible for making omega-7 fatty acids in the Arabidopsis aleurone. Plant Physiology. 172 (1), pp. 154-162. https://doi.org/10.1104/pp.16.00836

Acyltransferases And Uses Thereof In Fatty Acid Production (Patent US 2013/0097733 A1)

H2 - Patents applied for
Senger, T., Marty, L., Stymne, S., Lindberg, Y. J., Napier, J. A., Sayanova, O. V., Haslam, R. P. and Ruiz-Lopez, N. 2013. Acyltransferases And Uses Thereof In Fatty Acid Production (Patent US 2013/0097733 A1) . US 2013/0097733 A1

Acyltransferases And Uses Thereof In Fatty Acid Production (Patent US 2016/0272951 A1)

H2 - Patents applied for
Senger, T., Marty, L., Stymne S., Lindberg, Y. J., Napier, J. A., Sayanova, O. V., Haslam, R. P. and Ruiz-Lopez, N. 2016. Acyltransferases And Uses Thereof In Fatty Acid Production (Patent US 2016/0272951 A1) . US 2016/0272951 A1

Acyltransferases And Uses Thereof In Fatty Acid Production (Patent US 9388437 B2)

H1 - Patents granted
Napier, J. A., Senger, T., Marty, L., Stymne, S., Lindberg, Y. J., Sayanova, O. V., Haslam, R. P. and Ruiz-Lopez, N. 2016. Acyltransferases And Uses Thereof In Fatty Acid Production (Patent US 9388437 B2) . US 9388437 B2 182-807-288-915-40X

Acyltransferases And Uses Therof In Fatty Acid Production (Patent CA 2804925 A1)

H2 - Patents applied for
Senger, T., Marty, L., Stymne, S., Lindberg, Y. J., Napier, J. A., Sayanova, O. V., Haslam, R. P. and Ruiz-Lopez, N. 2011. Acyltransferases And Uses Therof In Fatty Acid Production (Patent CA 2804925 A1) . CA 2804925 A1

Acyltransferases And Uses Therof In Fatty Acid Production (Patent EP 2585603 A1)

H2 - Patents applied for
Senger Toralf, Marty, L., Stymne, S., Lindberg Yilmaz Jenny, Napier, J. A., Sayanova, O. V., Haslam, R. P. and Ruiz-Lopez, N. 2013. Acyltransferases And Uses Therof In Fatty Acid Production (Patent EP 2585603 A1) . EP 2585603 A1

Acyltransferases And Uses Therof In Fatty Acid Production (Patent EP 2585603 B1)

H1 - Patents granted
Senger, T., Marty, L., Stymne, S., Lindberg , Y. J., Napier, J. A., Sayanova, O. V., Haslam, R. P. and Ruiz-Lopez, N. 2017. Acyltransferases And Uses Therof In Fatty Acid Production (Patent EP 2585603 B1). EP 2585603 B1

Acyltransferases And Uses Therof In Fatty Acid Production (Patent WO 2011/161093 A1)

H2 - Patents applied for
Senger, T., Marty, L., Stymne, S., Lindberg, Y. J., Napier, J. A., Sayanova, O. V., Haslam, R. P. and Ruiz-Lopez, N. 2011. Acyltransferases And Uses Therof In Fatty Acid Production (Patent WO 2011/161093 A1). WO 2011/161093 A1

Addressing proteomic approaches in phytoremediation

C2 - Non-edited contributions to conferences
Haslam, R. P., Gallardo, K., Job, D. and Coleman, J. O. D. 2001. Addressing proteomic approaches in phytoremediation. Abstracts COST 837 Working Group 3 Meeting on Genomic Approaches within the COST 837 Action, Montpellier, 30 November-1 December 2001 .

Agriculture can help aquaculture become greener

A - Papers appearing in refereed journals
Napier, J. A., Haslam, R. P., Olsen, R-E., Tocher, D. R. and Betancor, M. B. 2020. Agriculture can help aquaculture become greener. Nature Food. 1, pp. 680-683. https://doi.org/10.1038/s43016-020-00182-9

Alterations in sphingolipid synthesis in the model plant Arabidopsis thaliana is associated with cell polarity and developmental defects

C2 - Non-edited contributions to conferences
Roudier, F., Gissot, L., Vignard, J., Rochas, C., Moreau, P., Napier, J. A., Morin, H., Bellec, Y., Palauqui, J-C. and Faure, J-D. 2006. Alterations in sphingolipid synthesis in the model plant Arabidopsis thaliana is associated with cell polarity and developmental defects.

Altering specifity of a Ricinus communis cytochrome b5 fusion desaturase

A - Papers appearing in refereed journals
Michaelson, L. V. and Napier, J. A. 2002. Altering specifity of a Ricinus communis cytochrome b5 fusion desaturase. Biochemical Society Transactions. 30 (5), p. A123. https://doi.org/10.1042/bst030a123a

Amino acid sequence and molecular modelling of a lipid transfer protein from sunflower (Helianthus annus L.) seeds

A - Papers appearing in refereed journals
Luckett, S., Sessions, R. B., Michaelson, L. V., Naldrett, M. J., Clarke, A. R., Fido, R. J., Tatham, A. S. and Shewry, P. R. 2001. Amino acid sequence and molecular modelling of a lipid transfer protein from sunflower (Helianthus annus L.) seeds. Protein And Peptide Letters. 8, pp. 241-248.

An alternative pathway for the effective production of the omega-3 long-chain polyunsaturates EPA and ETA in transgenic oilseeds

A - Papers appearing in refereed journals
Ruiz-Lopez, N., Haslam, R. P., Usher, S. L., Napier, J. A. and Sayanova, O. V. 2015. An alternative pathway for the effective production of the omega-3 long-chain polyunsaturates EPA and ETA in transgenic oilseeds. Plant Biotechnology Journal. 13 (9), pp. 1264-1275. https://doi.org/10.1111/pbi.12328

An alternative to fish oils: metabolic engineering of oil-seed crops to produce omega-3 long chain polyunsaturated fatty acids

A - Papers appearing in refereed journals
Venegas-Caleron, M., Sayanova, O. V. and Napier, J. A. 2010. An alternative to fish oils: metabolic engineering of oil-seed crops to produce omega-3 long chain polyunsaturated fatty acids. Progress in Lipid Research. 49, pp. 108-119. https://doi.org/10.1016/j.plipres.2009.10.001

An assessment of enriched apoplastic extracts by proteomic analysis

C2 - Non-edited contributions to conferences
Haslam, R. P., Downie, A. L., Raveton, M., Gallardo, K., Job, D., Pallett, K. E., John, P., Parry, M. A. J. and Coleman, J. O. D. 2003. An assessment of enriched apoplastic extracts by proteomic analysis. Abstracts COST 837 Achievement and Prospects of Phytoremediation in Europe: Final Scientific Workshop and Management Committee Meeting, Vienna, 15-18 October 2003 .

An oil containing EPA and DHA from transgenic Camelina sativa to replace marine fish oil in feeds for Atlantic salmon (Salmo salar L.): Effects on intestinal transcriptome, histology, tissue fatty acid profiles and plasma biochemistry

A - Papers appearing in refereed journals
Betancor, M. B., Li, K., Sprague, M., Bardal, T., Sayanova, O. V., Usher, S., Han, L., Måsøval, K., Torrissen, O., Napier, J. A., Tocher, D. R. and Olsen, R. E. 2017. An oil containing EPA and DHA from transgenic Camelina sativa to replace marine fish oil in feeds for Atlantic salmon (Salmo salar L.): Effects on intestinal transcriptome, histology, tissue fatty acid profiles and plasma biochemistry. PLOS ONE. 12 (4), p. e0175415. https://doi.org/10.1371/journal.pone.0175415

An unusual desaturase in Aquilegia vulgaris

A - Papers appearing in refereed journals
Longman, A. J., Michaelson, L. V., Sayanova, O. V., Napier, J. A. and Stobart, A. K. 2000. An unusual desaturase in Aquilegia vulgaris. Biochemical Society Transactions. 28 (6), pp. 641-643. https://doi.org/10.1042/bst0280641

Analysis of cytochrome b5 reductase-mediated metabolism in the phytopathogenic fungus Zymoseptoria tritici reveals novel functionalities implicated in virulence

A - Papers appearing in refereed journals
Derbyshire, M. C., Michaelson, L. V., Parker, J., Kelly, S., Thacker, U., Powers, S. J., Bailey, A., Hammond-Kosack, K. E., Courbot, M. and Rudd, J. J. 2015. Analysis of cytochrome b5 reductase-mediated metabolism in the phytopathogenic fungus Zymoseptoria tritici reveals novel functionalities implicated in virulence. Fungal Genetics and Biology. 82 (September), pp. 69-84. https://doi.org/10.1016/j.fgb.2015.05.008

Analysis of detergent-resistant membranes in Arabidopsis. Evidence for plasma membrane lipid rafts

A - Papers appearing in refereed journals
Borner, G. H. H., Sherrier, D. J., Weimar, T., Michaelson, L. V., Hawkins, N. D., Macaskill, A., Napier, J. A., Beale, M. H., Lilley, K. S. and Dupree, P. 2005. Analysis of detergent-resistant membranes in Arabidopsis. Evidence for plasma membrane lipid rafts. Plant Physiology. 137 (1), pp. 104-116. https://doi.org/10.1104/pp.104.053041

Analysis of Metals in Whole Cells, Thylakoids and Photosynthetic Protein Complexes in Synechocystis sp. PCC6803

A - Papers appearing in refereed journals
Gandini, C., Husted, S. and Schmidt, S. B. 2018. Analysis of Metals in Whole Cells, Thylakoids and Photosynthetic Protein Complexes in Synechocystis sp. PCC6803 . Bio-protocol. 8 (12). https://doi.org/10.21769/BioProtoc.2889

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