SAS-H: Soil Biology
| Title | SAS-H: Soil Biology |
|---|---|
| Type | Research cluster |
Outputs
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The impact of drought length and intensity on N cycling gene abundance, transcription and the size of an N2O hot moment from a temperate grassland soil
A - Papers appearing in refereed journals
Barrat, H., Clark, I. M., Evans, J., Chadwick, D. R. and Cardenas, L. M. 2022. The impact of drought length and intensity on N cycling gene abundance, transcription and the size of an N2O hot moment from a temperate grassland soil. Soil Biology and Biochemistry. 168 (May), p. 108606. https://doi.org/10.1016/j.soilbio.2022.108606
A nation that rebuilds its soils rebuilds itself- an engineer’s perspective
A - Papers appearing in refereed journals
Johnson, K. L., Gray, N. D., Stone, W., Kelly, B. F. J., Fitzsimons, M., Clarke, C., Blake, L., Chivasa, S., Mtambanengwe, F., Mapfumo, P., Baker, A., Beckmann, S., Dominelli, L., Neal, A. L. and Gwandu, T. 2022. A nation that rebuilds its soils rebuilds itself- an engineer’s perspective. Soil Security. 7, p. 100060. https://doi.org/10.1016/j.soisec.2022.100060
Distribution of heavy metals polluting the soil near an abandoned mine in Northwestern Mexico
A - Papers appearing in refereed journals
Gonzalez-Mendez, B., Webster, R., Loredo-Portales, R., Molina-Freaner, F. and Djellouli, R. 2022. Distribution of heavy metals polluting the soil near an abandoned mine in Northwestern Mexico. Environmental Earth Sciences. 81 (6), p. 176. https://doi.org/10.1007/s12665-022-10285-0
Genetic diversity in nitrogen fertilizer responses and N gas emission in modern wheat
A - Papers appearing in refereed journals
Oszvald, M., Hassall, K. L., Hughes, D. J., Torres-Ballesteros, A., Clark, I. M., Riche, A. B. and Heuer, S. 2022. Genetic diversity in nitrogen fertilizer responses and N gas emission in modern wheat. Frontiers in Plant Science. 13, p. 816475. https://doi.org/10.3389/fpls.2022.816475
The cost-effectiveness of reflectance spectroscopy for estimating soil organic carbon
A - Papers appearing in refereed journals
Li, S., Viscarra Rossel, R. A. and Webster, R. 2022. The cost-effectiveness of reflectance spectroscopy for estimating soil organic carbon. European Journal of Soil Science. 73 (1), p. e13202. https://doi.org/10.1111/ejss.13202
N2O hot moments were not driven by changes in nitrogen and carbon substrates or changes in N cycling functional genes
A - Papers appearing in refereed journals
Barrat, H., Charteris, A., Le Cocq, K., Abadie, M., Clark, I. M., Chadwick, D. R. and Cardenas, L. M. 2022. N2O hot moments were not driven by changes in nitrogen and carbon substrates or changes in N cycling functional genes. European Journal of Soil Science. 73 (1), p. e13190. https://doi.org/10.1111/ejss.13190
Localized nutrient supply can facilitate root proliferation and increase nitrogen-use efficiency in compacted soil
A - Papers appearing in refereed journals
Wu, X., Li, H., Rengel, Z., Whalley, W. R., Li, H., Zhang, F., Shen, J. and Jin, K. 2022. Localized nutrient supply can facilitate root proliferation and increase nitrogen-use efficiency in compacted soil. Soil & Tillage Research. 215 (January), p. 105198. https://doi.org/10.1016/j.still.2021.105198
Reduction effect of individual N, P, K fertilization on antibiotic resistance genes in reclaimed water irrigated soil
A - Papers appearing in refereed journals
Cui, E., Fan, X., Hu, C., Neal, A. L., Cui, B., Liu, C. and Gao, F. 2022. Reduction effect of individual N, P, K fertilization on antibiotic resistance genes in reclaimed water irrigated soil . Ecotoxicology and Environmental Safety. 231, p. 113185. https://doi.org/10.1016/j.ecoenv.2022.113185
Cropping system exerts stronger influence on antibiotic resistance gene assemblages in greenhouse soils than reclaimed wastewater irrigation
A - Papers appearing in refereed journals
Liu, Y., Neal, A. L., Zhang, X., Fan, H., Liu, H. and Li, Z. 2022. Cropping system exerts stronger influence on antibiotic resistance gene assemblages in greenhouse soils than reclaimed wastewater irrigation . Journal Of Hazardous Materials. 425, p. 128046. https://doi.org/10.1016/j.jhazmat.2021.128046
The molecular size continuum of soil organic phosphorus and its chemical associations
A - Papers appearing in refereed journals
Reusser, J. E., Tamburini, F., Neal, A. L., Verel, R., Frossard, E. and McLaren, T. I. 2022. The molecular size continuum of soil organic phosphorus and its chemical associations . Geoderma. 412, p. 115716. https://doi.org/10.1016/j.geoderma.2022.115716
Evolution of the transport properties of soil aggregates and their relationship with soil organic carbon following land use changes
A - Papers appearing in refereed journals
Wang, F., Zhang, X., Neal, A. L., Crawford, J. W., Mooney, S. and Bacq-Lebreuil, A. 2022. Evolution of the transport properties of soil aggregates and their relationship with soil organic carbon following land use changes. Soil & Tillage Research. 215, p. 105226. https://doi.org/10.1016/j.still.2021.105226
Influence of organic matter on soil properties: by how much can organic carbon be increased in arable soils and can changes be measured?
A - Papers appearing in refereed journals
Powlson, D. S. and Neal, A. L. 2021. Influence of organic matter on soil properties: by how much can organic carbon be increased in arable soils and can changes be measured? Proceedings of the International Fertiliser Society. 862, pp. 1-32.
Geostatistics : Modelling spatial variation
B - Book chapters etc edited externally
Webster, R. 2021. Geostatistics : Modelling spatial variation. in: Encyclopedia of Soils in the Environment Elsevier.
On the improved Brutsaert's model to estimate the soil water content by measuring P-wave and S-wave speeds: A commentary on Xu et al. (2020)
A - Papers appearing in refereed journals
Shin, H. C. and Whalley, W. R. 2021. On the improved Brutsaert's model to estimate the soil water content by measuring P-wave and S-wave speeds: A commentary on Xu et al. (2020). Geoderma. 402 (15 November), p. 115335. https://doi.org/10.1016/j.geoderma.2021.115335
Land management legacy affects abundance and function of the acdS gene in wheat root associated pseudomonads
A - Papers appearing in refereed journals
Ruscoe, H., Taketani, R., Clark, I. M., Lund, G., Hughes, D. J., Dodd, I., Hirsch, P. R. and Mauchline, T. H. 2021. Land management legacy affects abundance and function of the acdS gene in wheat root associated pseudomonads. Frontiers in Microbiology. 12, p. 611339. https://doi.org/10.3389/fmicb.2021.611339
Theory of microbial coexistence in promoting soil–plant ecosystem health
A - Papers appearing in refereed journals
Zhang, N., Nunan, N., Hirsch, P. R., Sun, B., Zhou, J. and Liang, Y. 2021. Theory of microbial coexistence in promoting soil–plant ecosystem health. Biology And Fertility Of Soils. 57, p. 897–911. https://doi.org/10.1007/s00374-021-01586-w
Comparison of soil tortuosity calculated by different methods
A - Papers appearing in refereed journals
Zhang, Y., Yang, Z., Wang, F. and Zhang, X. 2021. Comparison of soil tortuosity calculated by different methods. Geoderma. 402, p. 115358. https://doi.org/10.1016/j.geoderma.2021.115358
Metagenomic approaches reveal differences in genetic diversity and relative abundance of nitrifying bacteria and archaea in contrasting soils
A - Papers appearing in refereed journals
Clark, I. M., Hughes, D. J., Fu, Q., Abadie, M. and Hirsch, P. R. 2021. Metagenomic approaches reveal differences in genetic diversity and relative abundance of nitrifying bacteria and archaea in contrasting soils . Scientific Reports. 11, p. 15905. https://doi.org/10.1038/s41598-021-95100-9
Editorial to the Thematic Topic Towards a more sustainable agriculture through managing soil microbiomes
A - Papers appearing in refereed journals
Babin, D., Leoni, C., Neal, A. L., Sessitsch, A. and Smalla, K. 2021. Editorial to the Thematic Topic Towards a more sustainable agriculture through managing soil microbiomes. FEMS Microbiology Ecology. 97 (8), p. fiab094. https://doi.org/10.1093/femsec/fiab094
Enterotype-like microbiome stratification as emergent structure in complex adaptive systems: A mathematical model
A - Papers appearing in refereed journals
Martin, M. A., Crawford, J. W., Neal, A. L. and Garcia-Gutierrez-Baez, C. 2021. Enterotype-like microbiome stratification as emergent structure in complex adaptive systems: A mathematical model. Fractals: Complex Geometry, Patterns, and Scaling in Nature and Society. https://doi.org/10.1142/S0218348X21502108
Relative contributions of bacteria and fungi to nitrous oxide emissions following nitrate application in soils representing different land uses
A - Papers appearing in refereed journals
Castellano-Hinojosa, A., Le Cocq, K., Charteris, A., Abadie, M., Chadwick, D. R., Clark, I. M., Bedmar, E. J. and Cardenas, L. M. 2021. Relative contributions of bacteria and fungi to nitrous oxide emissions following nitrate application in soils representing different land uses. International Biodeterioration & Biodegradation. 159, p. 105199. https://doi.org/10.1016/j.ibiod.2021.105199
Determination of wheat spike and spikelet architecture and grain traits using X-ray Computed Tomography imaging
A - Papers appearing in refereed journals
Zhou, H., Riche, A. B., Hawkesford, M. J., Whalley, W. R., Atkinson, B. S., Sturrock, C. J. and Mooney, S. J. 2021. Determination of wheat spike and spikelet architecture and grain traits using X-ray Computed Tomography imaging. Plant Methods. 17 (article), p. 26. https://doi.org/10.1186/s13007-021-00726-5
Inorganic Chemical Fertilizer Application to Wheat Reduces the Abundance of Putative Plant Growth-Promoting Rhizobacteria
A - Papers appearing in refereed journals
Reid, T. E., Kavamura, V. N., Abadie, M., Torres-Ballesteros, A., Pawlett, M., Clark, I. M., Harris, J. and Mauchline, T. H. 2021. Inorganic Chemical Fertilizer Application to Wheat Reduces the Abundance of Putative Plant Growth-Promoting Rhizobacteria. Frontiers in Microbiology. 12 (article), p. 642587. https://doi.org/10.3389/fmicb.2021.642587
The interaction between wheat roots and soil pores in structured field soil
A - Papers appearing in refereed journals
Zhou, H., Whalley, W. R., Hawkesford, M. J., Ashton, R. W., Atkinson, B., Atkinson, J. A., Sturrock, C. J., Bennett, M. J. and Mooney, S. J. 2021. The interaction between wheat roots and soil pores in structured field soil. Journal of Experimental Botany. 72 (2), pp. 747-756. https://doi.org/10.1093/jxb/eraa475
Characteristics of soil organic matter within an erosional landscape under agriculture in Northeast China: stock, source, and thermal stability
A - Papers appearing in refereed journals
Zhang, W., Gregory, A. S., Whalley, W. R., Ren, T. and Gao, W. 2021. Characteristics of soil organic matter within an erosional landscape under agriculture in Northeast China: stock, source, and thermal stability. Soil & Tillage Research. 209, p. 104927. https://doi.org/10.1016/j.still.2020.104927
Plant roots sense soil compaction through restricted ethylene diffusion
A - Papers appearing in refereed journals
Pandey, B. K., Huang, G., Bhosale, R., Hartman, S., Sturrock, C., Jose, L., Martin, O. C., Karady, M., Voesenek, L. A. C. J., Ljung, K., Lynch, J. P., Brown, K. M, Whalley, W. R., Mooney, S. J., Zhang, D. and Bennett, M. J. 2021. Plant roots sense soil compaction through restricted ethylene diffusion. Science - AAAS. 371 (6526), p. 276–280. https://doi.org/10.1126/science.abf3013
Advances in understanding of nitrogen (N) uptake by plant roots
B - Book chapters etc edited externally
Hawkesford, M. J. and Whalley, W. R. 2021. Advances in understanding of nitrogen (N) uptake by plant roots. in: Gregory, P. (ed.) Understanding and improving crop root function UK Burleigh Dodds.
The effect of organic carbon content on soil compression characteristics
A - Papers appearing in refereed journals
Suravi, K., Attenborough, K., Taherzadeh, S., Macdonald, A. J., Powlson, D. S., Ashton, R. W., Suravi, K. N. and Whalley, W. R. 2021. The effect of organic carbon content on soil compression characteristics. Soil & Tillage Research. 209 (May), p. 104975. https://doi.org/10.1016/j.still.2021.104975
Relationship between soil carbon sequestration and the ability of soil aggregates to transport dissolved oxygen
A - Papers appearing in refereed journals
Zhang, X., Gregory, A. S., Whalley, W. R., Coleman, K., Neal, A. L., Bacq-Labreuil, A., Mooney, S. J., Crawford, J. W., Soga, K. and Illangasekare, T. H. 2021. Relationship between soil carbon sequestration and the ability of soil aggregates to transport dissolved oxygen. Geoderma. 403, p. 115370. https://doi.org/10.1016/j.geoderma.2021.115370
Defining the wheat microbiome: towards microbiome-facilitated crop production
A - Papers appearing in refereed journals
Kavamura, V. N., Mendes, R., Bargaz, A. and Mauchline, T. H. 2021. Defining the wheat microbiome: towards microbiome-facilitated crop production. Computational and structural biotechnology journal. 19, pp. 1200-1213. https://doi.org/10.1016/j.csbj.2021.01.045
Poor competitiveness of Bradyrhizobium in pigeon pea root colonization in Indian soils
A - Papers appearing in refereed journals
Chalasani, D., Basu, A., Pullabhotla, S. V. S . R. N., Jorrin, B., Neal, A. L., Poole, P. S., Podile, A. R. and Tkacz, A. 2021. Poor competitiveness of Bradyrhizobium in pigeon pea root colonization in Indian soils . mBio. 12 (4), pp. e00423-21. https://doi.org/10.1128/mBio.00423-21
Microbiome Aggregated Traits and Assembly are More Sensitive to Soil Management than Diversity
A - Papers appearing in refereed journals
Neal, A. L., Hughes, D. J., Clark, I. M., Jansson, J. K. and Hirsch, P. R. 2021. Microbiome Aggregated Traits and Assembly are More Sensitive to Soil Management than Diversity. mSystems. 6 (3), pp. e01056-20. https://doi.org/10.1128/mSystems.01056-20
Key traits for ruminant livestock across diverse production systems in the context of climate change: perspectives from a global platform of research farms
A - Papers appearing in refereed journals
Rivero, M. J., Lopez-Villalobos, N., Evans, A., Berndt, A., Cartmill, A., Neal, A. L., McLaren, A., Farruggia, A., Mignolet, C., Chadwick, D. R., Styles, D., McCracken, D., Busch, D., Martin, G. B., Fleming, H. R., Sheridan, H., Gibbons, J., Merbold, L., Eisler, M., Lambe, N., Rovira, P., Harris, P., Murphy, P., Vercoe, P. E., Williams, P., Machado, R., Takahashi, T., Puech, T., Boland, T., Ayala, W. and Lee, M. R. F. 2021. Key traits for ruminant livestock across diverse production systems in the context of climate change: perspectives from a global platform of research farms. Reproduction, Fertility and Development. 33 (2), pp. 1-19. https://doi.org/10.1071/RD20205
Wheat growth responses to soil mechanical impedance are dependent on phosphorus supply
A - Papers appearing in refereed journals
Wang, X., Shen, J., Hedden, P., Phillips, A. L., Thomas, S. G., Ge, Y., Ashton, R. W. and Whalley, W. R. 2021. Wheat growth responses to soil mechanical impedance are dependent on phosphorus supply. Soil & Tillage Research. 205, p. 104754. https://doi.org/10.1016/j.still.2020.104754
Predicting the growth of lettuce from soil infrared reflectance spectra: the potential for crop management
A - Papers appearing in refereed journals
Breure, T. S., Milne, A. E., Webster, R., Haefele, S. M., Hannam, J. A., Moreno-Rojas, S. and Corstanje, R. 2021. Predicting the growth of lettuce from soil infrared reflectance spectra: the potential for crop management. Precision Agriculture. 22, p. 226–248. https://doi.org/10.1007/s11119-020-09739-x
The effects of long-term fertilizations on soil hydraulic properties vary with scales
A - Papers appearing in refereed journals
Zhang, X., Neal, A. L., Crawford, J. W., Bacq-Labreuil, A., Akkari, E. and Rickard, W. 2021. The effects of long-term fertilizations on soil hydraulic properties vary with scales. Journal of Hydrology. 539, p. 125890. https://doi.org/10.1016/j.jhydrol.2020.125890
Change in phytoextraction of Cd by rapeseed (Brassica napus L.) with application rate of organic acids and the impact of Cd migration from bulk soil to the rhizosphere
A - Papers appearing in refereed journals
Qiao, D., Lu, H. and Zhang, X. 2020. Change in phytoextraction of Cd by rapeseed (Brassica napus L.) with application rate of organic acids and the impact of Cd migration from bulk soil to the rhizosphere. Environmental Pollution. 267, p. 115452. https://doi.org/10.1016/j.envpol.2020.115452
Century long fertilization reduces stochasticity controlling grassland microbial community succession
A - Papers appearing in refereed journals
Liang, Y., Ning, D., Lu, Z., Zhang, N., Hale, L., Wu, L., Clark, I. M., McGrath, S. P., Storkey, J., Hirsch, P. R., Sun ,B. and Zhou, J. 2020. Century long fertilization reduces stochasticity controlling grassland microbial community succession. Soil Biology and Biochemistry. 151 (Dec), p. 108023. https://doi.org/10.1016/j.soilbio.2020.108023
Time-lapse geophysical assessment of agricultural practices on soil moisture dynamics
A - Papers appearing in refereed journals
Blanchy, G., Watts, C. W., Richards, J., Bussell, J., Huntenburg, K., Sparkes, D. L., Stalham, M., Hawkesford, M. J., Whalley, W. R. and Binley, A. 2020. Time-lapse geophysical assessment of agricultural practices on soil moisture dynamics. Vadose Zone Journal. 19 (1), p. e20080. https://doi.org/10.1002/vzj2.20080
Accounting for heterogeneity in the 𝛉–𝛔 relationship: Application to wheat phenotyping using EMI
A - Papers appearing in refereed journals
Blanchy, G., Watts, C. W., Ashton, R. W., Webster, C. P., Hawkesford, M. J., Whalley, W. R. and Binley, A. 2020. Accounting for heterogeneity in the 𝛉–𝛔 relationship: Application to wheat phenotyping using EMI. Vadose Zone Journal. 19 (1), p. e20037. https://doi.org/10.1002/vzj2.20037