Items where Author is "Hassani-Pak, Keywan"

Item Type No Grouping

The distinct roles of genome, methylation, transcription, and translation on protein expression in Arabidopsis thaliana resolve the Central Dogma’s information flow. (2025) Zhong, Z., Bailey, Mark, Kim, Y., Pesaran-Afsharyan, Nazanin, Parker, Briony, Arathoon, L, Li, Xiaowei, Rundle, Chelsea, Behrens, A., Nedialkova, D., Slavov, Gancho, Hassani-Pak, Keywan, Lilley, K.S., Theodoulou, Freddie, Mott, R.

Multiple toxins and a protease contribute to the aphid-killing ability of Pseudomonas fluorescens PpR24. (2024) Paliwal, D., Rabiey, M., Mauchline, Tim, Hassani-Pak, Keywan, Nauen, R., Wagstaff, C., Andrews, S., Bass, C., Jackson, R.

The complete genome assemblies of 19 insect pests of worldwide importance to agriculture. (2023) King, Robert, Buer, B., Davies, Emyr, Ganko, E., Guest, M., Hassani-Pak, Keywan, Hughes, David, Raming, K., Rawlings, Chris, Williamson, Martin, Crossthwaite, A., Nauen, R., Field, Lin picture_as_pdf

Novel molecules and target genes for vegetative heat tolerance in wheat. (2022) Rose, Tess, Wilkinson, Mark, Lowe, Claudia, Xu, Jiemeng, Hughes, David, Hassall, Kirsty, Hassani-Pak, Keywan, Amberkar, Sandeep, Noleto-Dias, Clarice, Ward, Jane, Heuer, Sigrid

Proanthocyanidin Biosynthesis in the Developing Wheat Seed Coat Investigated by Chemical and RNA-seq Analysis. (2022) Phillips, Andy, Vaughan, Simon, Baker, J., Primavesi, Lucia, Patil, A., King, Robert, Hassani-Pak, Keywan, Kulasekaran, Satish, Coghill, J., Ward, Jane, Huttly, Alison

A Near-Chromosome Level Genome Assembly of the European Hoverfly, Sphaerophoria Rueppellii (Diptera: Syrphidae), and a Comparative Analysis of Insecticide Resistance-Related Gene Families in Hemipteran Crop Pests and Pollinators. (2022) Bailey, Emma, Field, Lin, Rawlings, Chris, King, Robert, Mohareb, F., Hassani-Pak, Keywan, Hughes, David, Williamson, Martin, Ganko, E., Buer, B., Nauen, R.

A scaffold-level genome assembly of a minute pirate bug, Orius laevigatus, and a comparative analysis of insecticide resistance-related gene families with hemipteran crop pests. (2022) Bailey, Emma, Field, Lin, Rawlings, Chris, King, Robert, Mahareb, F., Hassani-Pak, Keywan, Hughes, David, Williamson, Martin, Ganko, E., Buer, B., Nauen, R.

Daisychain Search and Interactive Visualisation of Homologs in Genome Assemblies. (2021) Schliebs, O., Chan, C-K. K., Bayer, P. E., Petereit, J., Singh, Ajit, Hassani-Pak, Keywan, Batley, J., Edwards, D.

High-quality, haplotype-phased de novo assembly of the highly heterozygous fig genome, a major genetic resource for fig breeding. (2021) Usai, G., Mascagni, F., Giordani, T., Vangelisti, A., Bosi, E., Zuccolo, A., Ceccarelli, M., King, Robert, Hassani-Pak, Keywan, Solorzano, L. S., Cavallini, A., Natali, L. picture_as_pdf

Gene-based mapping of trehalose biosynthetic pathway genes reveals association with source- and sink-related yield traits in a spring wheat panel. (2021) Hottis-Lyra, Danilo, Griffiths, Cara, Watson, Amy, Joynson, R., Molero, G., Igna, Alina, Hassani-Pak, Keywan, Reynolds, M. P., Hall, A., Paul, Matthew

KnetMiner: a comprehensive approach for supporting evidence-based gene discovery and complex trait analysis across species. (2021) Hassani-Pak, Keywan, Singh, Ajit, Brandizi, Marco, Hearnshaw, Joseph, Parsons, J. D., Amberkar, Sandeep, Phillips, Andy, Doonan, J. H., Rawlings, Chris

The Wheat GENIE3 Network Provides Biologically-Relevant Information in Polyploid Wheat. (2020) Harrington, S. A., Backhaus, A. E., Singh, Ajit, Hassani-Pak, Keywan, Uauy, C.

A roadmap for gene functional characterisation in crops with large genomes: Lessons from polyploid wheat. (2020) Adamski, N. M., Borril, P., Brinton, J., Harrington​, S. A., Marchal, C., Bentley, A. R., Bovill, W. D., Cattivelli, L., Cockram, J., Contreras-Moreira, B., Ford, B., Ghosh, S., Harwood, W., Hassani-Pak, Keywan, Hayta, S., Hickey, L. T., Kanyuka, Kostya, King, J., Maccaferri, M., Naamati, G., Pozniak, C. J., Ramirez-Gonzalez, R. H., Sansaloni, C., Trevaskis, B., Wingen, L. U., Wulff, B. B. H., Uauy​, C.

A roadmap for gene functional characterisation in wheat. (2019) Adamski, N. M., Borril, P., Brinton, J., Harrington​, S. A., Marchal, C., Bentley, A. R., Bovill, W. D., Cattivelli, L., Cockram, J., Contreras-Moreira, B., Ford, B., Ghosh, S., Harwood, W., Hassani-Pak, Keywan, Hayta, S., Hickey, L. T., Kanyuka, Kostya, King, J., Maccaferri, M., Naamati, G., Pozniak, C. J., Ramirez-Gonzalez, R. H., Sansaloni, C., Trevaskis, B., Wingen, L. U., Wulff, B. B. H., Uauy​, C.

Epigenetic patterns within the haplotype phased fig (Ficus carica L.) genome. (2019) Usai, Gabriele, Mascagni, F., Giordani, T., Vangelisti, A., Bose, E., Zuccolo, A., Ceccarelli, M., King, Robert, Hassani-Pak, Keywan, Zambrano, L. S., Cavallini, A., Natali, L.

PHI-base - the Pathogen–Host Interactions database. (2019) Urban, Martin, Cuzick, Alayne, Seager, James, Wood, V., Rutherford, K., De Silva, N., Venkatesh, S. Y, Martinez, M. C., Pedro, H., Yates, A. D., Hassani-Pak, Keywan, Hammond-Kosack, Kim

A Co-Expression Network in Hexaploid Wheat Reveals Mostly Balanced Expression and Lack of Significant Gene Loss of Homeologous Meiotic Genes Upon Polyploidization. (2019) Alabdullah, AK., Borrill, P., Martin, AC., Ramirez-Gonzalez, RH., Hassani-Pak, Keywan, Uauy, C., Shaw, P., Moore, G.

Basic LEUCINE ZIPPER TRANSCRIPTION FACTOR 67 transactivates DELAY OF GERMINATION 1 to establish primary seed dormancy in Arabidopsis. (2019) Bryant, Fiona, Hughes, David, Hassani-Pak, Keywan, Eastmond, Peter

Natural variation in acyl editing is a determinant of seed storage oil composition. (2018) Menard, Guillaume, Bryant, F. M., Kelly, A. A., Craddock, C. P., Lavagi, I., Hassani-Pak, Keywan, Kurup, Smita, Eastmond, Peter

KnetMaps: a BioJS component to visualize biological knowledge networks. (2018) Singh, Ajit, Rawlings, Chris, Hassani-Pak, Keywan

Towards FAIRer Biological Knowledge Networks Using a Hybrid Linked Data and Graph Database Approach. (2018) Brandizi, Marco, Singh, Ajit, Rawlings, Chris, Hassani-Pak, Keywan

The Role of Trehalose 6-Phosphate in Crop Yield and Resilience. (2018) Paul, Matthew, Gonzalez, Asier, Griffiths, Cara, Hassani-Pak, Keywan

Transcriptome changes induced by arbuscular mycorrhizal fungi in sunflower (Helianthus annuus L.) roots. (2018) Vangelisti, A., Natali, L., Bernardi, R., Sbrana, C., Turrini, A., Hassani-Pak, Keywan, Hughes, David, Cavallini, A., Giovannetti, M., Giordani, T.

KnetMiner - An integrated data platform for gene mining and biological knowledge discovery. (2017) Hassani-Pak, Keywan

Spatiotemporal expression patterns of wheat amino acid transporters reveal their putative roles in nitrogen transport and responses to abiotic stress. (2017) Wan, Yongfang, King, Robert, Mitchell, Rowan, Hassani-Pak, Keywan, Hawkesford, Malcolm

Knowledge Discovery in Biological Databases for Revealing Candidate Genes Linked to Complex Phenotypes. (2017) Hassani-Pak, Keywan, Rawlings, Chris

Genome wide analysis of fatty acid desaturation and its response to temperature. (2017) Menard, Guillaume, Martin-Moreno, J., Bryant, Fiona, Munoz-Azcarate, Olaya, Kelly, A. A., Hassani-Pak, Keywan, Kurup, Smita, Eastmond, Peter

Developing integrated crop knowledge networks to advance candidate gene discovery. (2016) Hassani-Pak, Keywan, Castellote, M., Esch, M., Hindle, M. M., Lysenko, Artem, Taubert, J., Rawlings, Chris

Insecticide resistance mediated by an exon skipping event. (2016) Berger, Madeleine, Puinean, A. M., Randall, E., Zimmer, C. T., Silva, W. M., Bielza, P., Field, Lin, Hughes, David, Mellor, I., Hassani-Pak, Keywan, Siqueira, H. A. A., Williamson, Martin, Bass, Chris

The completed genome sequence of the pathogenic ascomycete fungus Fusarium graminearum. (2015) King, Robert, Urban, Martin, Hammond-Kosack, M. C. U., Hassani-Pak, Keywan, Hammond-Kosack, Kim

Transcriptome and metabolite profiling of the infection cycle of Zymoseptoria tritici on wheat reveals a biphasic interaction with plant immunity involving differential pathogen chromosomal contributions and a variation on the hemibiotrophic lifestyle definition. (2015) Rudd, Jason, Kanyuka, Kostya, Hassani-Pak, Keywan, Derbyshire, M., Andongabo, A. E., Devonshire, J., Lysenko, Artem, Saqi, M., Desai, N. M., Powers, Stephen, Hooper, J., Ambroso, L., Bharti, A., Farmer, A., Hammond-Kosack, Kim, Dietrich, R. A., Courbot, M.

Mutation scanning in wheat by exon capture and next-generation sequencing. (2015) King, Robert, Bird, N., Ramirez-Gonzalez, R., Coghill, J. A., Patil, A., Hassani-Pak, Keywan, Uauy, C., Phillips, Andy

Whole-genome analysis of Fusarium graminearum insertional mutants identifies virulence associated genes and unmasks untagged chromosomal deletions. (2015) Urban, Martin, King, Robert, Hassani-Pak, Keywan, Hammond-Kosack, Kim

Secondary cell wall composition and candidate gene expression in developing willow (Salix purpurea) stems. (2014) Wan, Yongfang, Gritsch, C., Tryfona, T., Ray, M. J., Andongabo, A. E., Hassani-Pak, Keywan, Jones, Huw, Dupree, P., Karp, Angela, Shewry, Peter, Mitchell, Rowan

Identification and analysis of differentially expressed genes in the wheat- Zymoseptoria tritici interaction. (2014) Kanyuka, Kostya, Andongabo, A. E., Hassani-Pak, Keywan, Powers, Stephen, Lysenko, Artem, Saqi, M., Derbyshire, M., Lee, W-S., Hammond-Kosack, Kim, Courbot, M., Rudd, Jason

Ondex Web: web-based visualization and exploration of heterogeneous biological networks. (2014) Taubert, J., Hassani-Pak, Keywan, Castells, Nathalie, Rawlings, Chris

A query suggestion workflow for life science IR-systems. (2014) Esch, M., Chen, J., Weise, S., Hassani-Pak, Keywan, Scholz, U., Lange, M.

A tale of one fungal pathogen of wheat: how it evades host surveillance and then hijacks host defences. (2014) Kanyuka, Kostya, Lysenko, Artem, Saqi, M., Derbyshire, M., Andongabo, A. E., Hassani-Pak, Keywan, Hammond-Kosack, Kim, Courbot, M., Rudd, Jason

Assessing the functional coherence of modules found in multiple-evidence networks from Arabidopsis. (2011) Lysenko, Artem, Defoin-Platel, M., Hassani-Pak, Keywan, Taubert, J., Hodgman, C., Rawlings, Chris, Saqi, M.

Gaining confidence in cross-species annotation transfer: from simple molecular function to complex phenotypic traits. (2011) Defoin-Platel, M., Hassani-Pak, Keywan, Rawlings, Chris

Enhancing data integration with text analysis to find proteins implicated in plant stress response. (2010) Hassani-Pak, Keywan, Legaie, R., Canevet, C., Van Den Berg, H. A., Moore, J. D., Rawlings, Chris

Graph-based sequence annotation using a data integration approach. (2008) Pesch, R., Lysenko, Artem, Hindle, M. M., Hassani-Pak, Keywan, Thiele, R., Rawlings, Chris, Kohler, J., Taubert, J.