Molecular phylogenetics using maximum-likelihood

B - Book chapters etc edited externally

Loza-Reyes, E. 2012. Molecular phylogenetics using maximum-likelihood. in: Manzanilla-Lopez, R. H. and Marban-Mendoza, M. (ed.) Practical plant nematology Biblioteca Basica de Agricultura, Montecillo. pp. 147-160

Authors	Loza-Reyes, E.
Editors	Manzanilla-Lopez, R. H. and Marban-Mendoza, M.
Page range	147-160
Year of Publication	2012
Book title	Practical plant nematology
Publisher	Biblioteca Basica de Agricultura, Montecillo
ISBN	9786077150787
Funder project or code	Centre for Mathematical and Computational Biology (MCB)
	Application of statistical methods to predictive biology

Related outputs

Short-term emissions of CO2 and N2O in response to periodic flood irrigation with waste water in the Mezquital Valley of Mexico

A - Papers appearing in refereed journals

Gonzalez-Mendez, B., Webster, R., Fiedler, S., Loza-Reyes, E., Harnandez, J. M., Ruiz-Suarez, L. G. and Siebe, C. 2015. Short-term emissions of CO2 and N2O in response to periodic flood irrigation with waste water in the Mezquital Valley of Mexico. Atmospheric Environment. 101, pp. 116-124. https://doi.org/10.1016/j.atmosenv.2014.10.048

Classification of molecular sequence data using Bayesian phylogenetic mixture models

A - Papers appearing in refereed journals

Loza-Reyes, E., Hurn, M. A. and Robinson, A. 2014. Classification of molecular sequence data using Bayesian phylogenetic mixture models. Computational Statistics & Data Analysis. 75, pp. 81-95. https://doi.org/10.1016/j.csda.2014.01.008

Interference in foraging behaviour of European and American house dust mites Dermatophagoides pteronyssinus and Dermatophagoides farinae (Acari: Pyroglyphidae) by catmint, Nepeta cataria (Lamiaceae)

A - Papers appearing in refereed journals

Khan, M. A., Jones, I., Loza-Reyes, E., Cameron, M. M., Pickett, J. A. and Birkett, M. A. 2012. Interference in foraging behaviour of European and American house dust mites Dermatophagoides pteronyssinus and Dermatophagoides farinae (Acari: Pyroglyphidae) by catmint, Nepeta cataria (Lamiaceae). Experimental and Applied Acarology. 57, pp. 65-74. https://doi.org/10.1007/s10493-012-9532-2

Aphid antixenosis in cotton is activated by the natural plant defence elicitor cis- jasmone

A - Papers appearing in refereed journals

Hegde, M., Oliveira, J. N., Da Costa, J. G., Loza-Reyes, E., Bleicher, E., Santana, A. E. G., Caulfield, J. C., Mayon, P., Dewhirst, S. Y., Bruce, T. J. A., Pickett, J. A. and Birkett, M. A. 2012. Aphid antixenosis in cotton is activated by the natural plant defence elicitor cis- jasmone. Phytochemistry. 78 (June), pp. 81-88. https://doi.org/10.1016/j.phytochem.2012.03.004

Activation of defence in sweet pepper, Capiscum annuum, by cis- jasmone, and its impact on aphid and aphid parasitoid behaviour

A - Papers appearing in refereed journals

Dewhirst, S. Y., Birkett, M. A., Loza-Reyes, E., Martin, J. L., Pye, B. J., Smart, L. E., Hardie, J. and Pickett, J. A. 2012. Activation of defence in sweet pepper, Capiscum annuum, by cis- jasmone, and its impact on aphid and aphid parasitoid behaviour. Pest Management Science. 68 (10), pp. 1419-1429. https://doi.org/10.1002/ps.3326

Visualizing biological data (VIZBI) 2012

C2 - Non-edited contributions to conferences

Loza-Reyes, E. 2012. Visualizing biological data (VIZBI) 2012. Blog post Software Sustainability Institute.

To R, or not to R? At the Royal Statistical Society

C2 - Non-edited contributions to conferences

Loza-Reyes, E. 2012. To R, or not to R? At the Royal Statistical Society. Blog post Software Sustainability Institute.

Mathematical and Computational Evolutionary Biology 2012

C2 - Non-edited contributions to conferences

Loza-Reyes, E. 2012. Mathematical and Computational Evolutionary Biology 2012. Blog post Software Sustainability Institute.

Evolution: from farm to tree

C2 - Non-edited contributions to conferences

Loza-Reyes, E. 2012. Evolution: from farm to tree. Blog post Software Sustainability Institute.

Repellents inhibit P450 enzymes in Stegomyia (Aedes) aegypti

A - Papers appearing in refereed journals

Jaramillo Ramirez, G. I., Logan, J. G., Loza-Reyes, E., Stashenko, E. and Moores, G. D. 2012. Repellents inhibit P450 enzymes in Stegomyia (Aedes) aegypti. PLOS ONE. 7, p. e48698 (8pp). https://doi.org/10.1371/journal.pone.0048698

The CYP51C gene, a novel and useful phylogenetic marker to distinguish different Fusarium species on cereals

C1 - Edited contributions to conferences/learned societies

Fernandez-Ortuno, D., Loza-Reyes, E., Rogers, S. L. and Fraaije, B. A. 2011. The CYP51C gene, a novel and useful phylogenetic marker to distinguish different Fusarium species on cereals. Dehne, H. W. (ed.) Modern fungicides and antifungal compounds VI . DPG, Braunschweig. pp. 413-416

What will climate change do to our wheat?

C2 - Non-edited contributions to conferences

Loza-Reyes, E. 2011. What will climate change do to our wheat? Blog post Software Sustainability Institute.

Analysis of two in planta expressed LysM effector homologs from the fungus Mycosphaerella graminicola reveals novel functional properties and varying contributions to virulence on wheat

A - Papers appearing in refereed journals

Marshall, R., Kombrink, A., Motteram, J., Loza-Reyes, E., Lucas, J. A., Hammond-Kosack, K. E., Thomma, B. P. H. J. and Rudd, J. J. 2011. Analysis of two in planta expressed LysM effector homologs from the fungus Mycosphaerella graminicola reveals novel functional properties and varying contributions to virulence on wheat. Plant Physiology. 156, pp. 756-769. https://doi.org/10.1104/pp.111.176347

The CYP51C gene, a novel marker for phylogenetic analysis of Fusarium species

C2 - Non-edited contributions to conferences

Fernandez-Ortuno, D., Loza-Reyes, E., Rogers, S. L. and Fraaije, B. A. 2010. The CYP51C gene, a novel marker for phylogenetic analysis of Fusarium species.

The CYP51C gene, a reliable marker to resolve interspecific phylogenetic relationships within the Fusarium species complex and a novel target for species-specific PCR

A - Papers appearing in refereed journals

Fernandez-Ortuno, D., Loza-Reyes, E., Atkins, S. L. and Fraaije, B. A. 2010. The CYP51C gene, a reliable marker to resolve interspecific phylogenetic relationships within the Fusarium species complex and a novel target for species-specific PCR. International Journal of Food Microbiology. 144, pp. 301-309. https://doi.org/10.1016/j.ijfoodmicro.2010.10.013

The CYP51C gene, a novel and useful phylogenetic marker to distinguish different Fusarium species on cereals

C2 - Non-edited contributions to conferences

Fernandez-Ortuno, D., Loza-Reyes, E., Rogers, S. L. and Fraaije, B. A. 2010. The CYP51C gene, a novel and useful phylogenetic marker to distinguish different Fusarium species on cereals. Abstracts 16th International Reinhardsbrunn Symposium: Modern Fungicides and Antifungal Compounds, Friedrichroda, 25-29 April 2010 . pp. 196

Permalink - https://repository.rothamsted.ac.uk/item/8qvqx/molecular-phylogenetics-using-maximum-likelihood