Latest Additions

Using virulence mutants to identify Avr genes in the wheat stem rust fungus, Puccinia graminis f. sp. tritici

C2 - Non-edited contributions to conferences
Dodds, P., Upadhyaya, N., Ortiz, D., Li, F., Chen, J., Miller, M., Luo, M., Mago, R., Ellis, J., Sperschneider, J., Nguyen-Phuc, H., Bouton, C., Steffenson, B., Hirsch, C., Silverstein, K., Park, R., Kanyuka, K. and Figueroa, M. 2019. Using virulence mutants to identify Avr genes in the wheat stem rust fungus, Puccinia graminis f. sp. tritici. 30th Fungal Genetics Conference. Pacific Grove, California, USA 12 Mar 2019

Optimal interpolation and isarithmic mapping of soil properties .1. The semi-variogram and punctual kriging

A - Papers appearing in refereed journals
Burgess, T. M. and Webster, R. 2019. Optimal interpolation and isarithmic mapping of soil properties .1. The semi-variogram and punctual kriging. European Journal Of Soil Science. 70 (1), pp. 11-19.

Influence of Pickling Process on Allium cepa and Citrus limon Metabolome as Determined via Mass Spectrometry-Based Metabolomics

A - Papers appearing in refereed journals
Tawfike, A. F., Farag, M. A., Donia, M. S., Ehrlich, A. and Wessjohann, L. A. 2019. Influence of Pickling Process on Allium cepa and Citrus limon Metabolome as Determined via Mass Spectrometry-Based Metabolomics. Molecules. 24 (5), p. 928.

Yield responses of arable crops to liming - An evaluation of relationships between yields and soil pH from a long-term liming experiment

A - Papers appearing in refereed journals
Holland, J. E., White, P. J., Glendining, M. J., Goulding, K. W. T. and McGrath, S. P. 2019. Yield responses of arable crops to liming - An evaluation of relationships between yields and soil pH from a long-term liming experiment. European Journal of Agronomy. 105 (April), pp. 176-188.

GWmodel

J - Computer programs
Lu, B., Harris, P., Charlton, M., Brunsdon, C, Nakaya, T. and Gollini, I. 2019. GWmodel.

Movement Ecology of Pest Helicoverpa: Implications for Ongoing Spread

A - Papers appearing in refereed journals
Jones, C. M., Parry, H., Tay, W. T., Reynolds, D. R. and Chapman, J. W. 2019. Movement Ecology of Pest Helicoverpa: Implications for Ongoing Spread. Annual Review Of Entomology. 64, pp. 277-295.

Pathogen Population Biology Research can Reduce International Threats to Tree Health Posed by Invasive Fungi

A - Papers appearing in refereed journals
King, K. M. 2019. Pathogen Population Biology Research can Reduce International Threats to Tree Health Posed by Invasive Fungi. Outlooks on Pest Management. 30 (1), pp. 5-9.

Scalable Database Indexing and Fast Image Retrieval Based on Deep Learning and Hierarchically Nested Structure Applied to Remote Sensing and Plant Biology

A - Papers appearing in refereed journals
Sadeghi-Tehran, P., Angelov, P., Virlet, N. and Hawkesford, M. J. 2019. Scalable Database Indexing and Fast Image Retrieval Based on Deep Learning and Hierarchically Nested Structure Applied to Remote Sensing and Plant Biology. Journal of Imaging. 5 (33).

Application of metabolomics and molecular networking in investigating the chemical profile and antitrypanosomal activity of British bluebells ( Hyacinthoides non-scripta )

A - Papers appearing in refereed journals
Raheem, D., Tawfike, A. F, Abdulmohsen, U., Edrada-Ebel, R. and Fitzsimmons-Thoss, V. 2019. Application of metabolomics and molecular networking in investigating the chemical profile and antitrypanosomal activity of British bluebells ( Hyacinthoides non-scripta ). Scientific Reports. 9 (1), p. 2547.

Advances in sorghum and millet research special issue

A - Papers appearing in refereed journals
Shewry, P. R. 2019. Advances in sorghum and millet research special issue. Journal of Cereal Science. 85, p. A1.

Genomic insight into neonicotinoid sensitivity in the solitary bee Osmia bicornis.

A - Papers appearing in refereed journals
Beadle, K., Singh, K. S., Troczka, B. J., Randall, E., Zaworra, M., Zimmer, C. T., Hayward, A., Reid, R., Kor, L., Kohler, M., Buer, B., Nelson, D. R., Williamson, M. S., Davies, T. G. E., Field, L. M., Nauen, R. and Bass, C. 2019. Genomic insight into neonicotinoid sensitivity in the solitary bee Osmia bicornis. PLOS Genetics. 15 (2), p. e1007903.

Drought stress affects the protein and dietary fiber content of wholemeal wheat flour in wheat/Aegilops addition lines.

A - Papers appearing in refereed journals
Rakszegi, M., Darkó, E., Lovegrove, A., Molnár, M., Lang, L., Bedő, Z, Molnár-Láng, M. and Shewry, P. R. 2019. Drought stress affects the protein and dietary fiber content of wholemeal wheat flour in wheat/Aegilops addition lines. PLOS ONE. 14 (2), p. e0211892.

Omega-3 Long-Chain Polyunsaturated Fatty Acids, EPA and DHA: Bridging the Gap between Supply and Demand Nutrients

A - Papers appearing in refereed journals
Tocher, D. R., Betancor, M. B., Sprague, M., Olsen, R. E. and Napier, J. A. 2019. Omega-3 Long-Chain Polyunsaturated Fatty Acids, EPA and DHA: Bridging the Gap between Supply and Demand Nutrients . Nutrients. 11 (1), p. 89.

Livestock Performance for Sheep and Cattle Grazing Lowland Permanent Pasture: Benchmarking Potential of Forage-Based Systems

A - Papers appearing in refereed journals
Orr, R. J., Griffith, B. A., Rivero-Viera, J. and Lee, M. R. F. 2019. Livestock Performance for Sheep and Cattle Grazing Lowland Permanent Pasture: Benchmarking Potential of Forage-Based Systems . Agronomy. 9 (101), pp. 1-17.

Function and pharmacology of glutamate-gated chloride channel exon 9 splice variants from the diamondback moth Plutella xylostella

A - Papers appearing in refereed journals
Wang, X., O´Reilly, A. O., Williamson, M. S., Puinean, A. M., Yang, Y., Wu, S. and Wu, Y. 2019. Function and pharmacology of glutamate-gated chloride channel exon 9 splice variants from the diamondback moth Plutella xylostella. Insect Biochemistry and Molecular Biology. 104, pp. 58-64.

Fluxes of N2O, CH4 and soil respiration as affected by water and nitrogen addition in a temperate desert

A - Papers appearing in refereed journals
Yue, P., Cui, X., Gong, Y., Li, K., Goulding, K. W. T. and Liu, X. 2019. Fluxes of N2O, CH4 and soil respiration as affected by water and nitrogen addition in a temperate desert. Geoderma. 337, pp. 770-772.

A flexible semi-empirical model for estimating ammonia volatilization from field-applied slurry

A - Papers appearing in refereed journals
Hafner, S. D., Pacholski, A., Bittman, S., Carozzi, M., Chantigny, M., Genermont, S., Hani, C., Hansen, M. N., Huijsmans, J., Kupper, T., Misselbrook, T. H., Neftel, A., Nyord, T. and Sommer, S. G. 2019. A flexible semi-empirical model for estimating ammonia volatilization from field-applied slurry. Atmospheric Environment. 199, pp. 474-484.

ACE: Application for Conditional probability Elicitation

J - Computer programs
Hassall, K. L. 2019. ACE: Application for Conditional probability Elicitation. GitHub Rothamsted Research.

A Possible Connection Between Plant Longevity and the Absence of Protein Fibrillation: Basis for Identifying Aggregation Inhibitors in Plants

A - Papers appearing in refereed journals
Mohammed-Beigi, H., Kjaer, L., Eskandari, H., Aliakbari, F., Christiansen, G., Ruvo, G., Ward, J. L. and Otzen, D.E. 2019. A Possible Connection Between Plant Longevity and the Absence of Protein Fibrillation: Basis for Identifying Aggregation Inhibitors in Plants. Frontiers in Plant Science. p. 10:148.

New bioactive metabolites from the elicited marine sponge-derived bacterium Actinokineospora spheciospongiae sp. nov.

A - Papers appearing in refereed journals
Tawfike, A., Attia, E. Z., Desoukey, S. Y., Hajjar, D., Makki, A. A., Schupp, P. J., Edrada-Ebel, R. and Abdelmohsen, U. R. 2019. New bioactive metabolites from the elicited marine sponge-derived bacterium Actinokineospora spheciospongiae sp. nov. AMB Express. 9 (12).

Isolation of anticancer and anti-trypanosome secondary metabolites from the endophytic fungus Aspergillus flocculus via bioactivity guided isolation and MS based metabolomics

A - Papers appearing in refereed journals
Tawfike, A. F, Romli, M., Clements, C., Abbott, G., Young, L., Schumacher, M., Diederich, M., Farag, M. and Edrada-Ebel, R. 2019. Isolation of anticancer and anti-trypanosome secondary metabolites from the endophytic fungus Aspergillus flocculus via bioactivity guided isolation and MS based metabolomics. Journal of Chromatography B. (1106-1107), pp. 71-83.

Response of ammonia volatilization to biochar addition: A meta-analysis

A - Papers appearing in refereed journals
Sha, Z., Li, Q., Lv, T., Misselbrook, T. H. and Liu, X. 2019. Response of ammonia volatilization to biochar addition: A meta-analysis. Science of The Total Environment. 655 (10), pp. 1387-1396.

Opposite fates of the purine metabolite allantoin under water and nitrogen limitations in bread wheat

A - Papers appearing in refereed journals
Casartelli, A., Melino, V.J., Baumann, U., Riboni, M., Suchecki, R., Jayasinghe, N.S., Mendis, H., Watanabe, M., Erban, A., Zuther, E., Hoefgen, R., Roessner, U., Okamoto, M. and Heuer, S. 2019. Opposite fates of the purine metabolite allantoin under water and nitrogen limitations in bread wheat. Plant Molecular Biology. pp. 1-21.

Spatial and habitat variation in aphid, butterfly, moth and bird phenologies over the last half century

A - Papers appearing in refereed journals
Bell, J. R., Botham, M.S., Henrys, P.A., Leech, D.I., Pearce-Higgins, J.W., Shortall, C. R., Brereton, T.M., Pickup, J. and Thackeray, S.J. 2019. Spatial and habitat variation in aphid, butterfly, moth and bird phenologies over the last half century. Global Change Biology.

Decision support framework to identify lakes that are likely to meet water quality targets if external inputs of phosphorus from agriculture are reduced

A - Papers appearing in refereed journals
May, L., Taylor, P., Spears, B., Pitt, J-A., Collins, A. L., Whitely, I., Anthony, S., Skirvin, D., Lee, D. and Pamela, S. Naden 2019. Decision support framework to identify lakes that are likely to meet water quality targets if external inputs of phosphorus from agriculture are reduced. Limnetica. 38 (1), pp. 489-501.

Determination of the prebiotic activity of wheat arabinogalactan peptide (AGP) using batch culture fermentation

A - Papers appearing in refereed journals
Harris, S., Powers, S. J., Monteagudo-Mera, A., Kosik, O., Lovegrove, A., Shewry, P. R. and Charalampopoulos, D. 2019. Determination of the prebiotic activity of wheat arabinogalactan peptide (AGP) using batch culture fermentation. European Journal Of Nutrition.

Digest: Plant-pathogen coevolution extends to shifts in plant breeding systems

A - Papers appearing in refereed journals
Hawkins, N. J. 2019. Digest: Plant-pathogen coevolution extends to shifts in plant breeding systems. Evolution.

Optimizing the bioenergy water footprint selecting SRC willow canopy phenotypes: regional scenario simulations

A - Papers appearing in refereed journals
Richard, B., Richter, G. M., Cerasuolo, M. and Shield, I. F. 2019. Optimizing the bioenergy water footprint selecting SRC willow canopy phenotypes: regional scenario simulations. Annals of Botany.

Spatially explicit simulation of land use/land cover changes: Current coverage and future prospects

A - Papers appearing in refereed journals
Ren, Y., Lu, Y., Comber, A., Fu, B., Harris, P. and Wu, L. 2019. Spatially explicit simulation of land use/land cover changes: Current coverage and future prospects. Earth-Science Reviews. 190, pp. 398-415.

Two common invertebrate predators show varying responses to different types of sentinel prey in a mesocosm study

A - Papers appearing in refereed journals
Greenop, A., Cecelja, A., Woodcock, B. A., Wilby, A., Cook, S. M. and Pywell, R. F. 2019. Two common invertebrate predators show varying responses to different types of sentinel prey in a mesocosm study. Journal of Applied Entomology.

Nitrogen use efficiency and nitrous oxide emissions from five UK fertilised grasslands

A - Papers appearing in refereed journals
Cardenas, L. M., Bhogal, A., Chadwick, D. R., McGeough, K., Misselbrook, T. H., Rees, R. M., Thorman, R. E., Watson, C. J., Williams, J. R., Smith, K. A. and Calvet, S. 2019. Nitrogen use efficiency and nitrous oxide emissions from five UK fertilised grasslands. Science of The Total Environment. 661 (15 April), pp. 696-710.

Cell surface immune receptors: the guardians of the plant’s extracellular spaces

A - Papers appearing in refereed journals
Kanyuka, K. and Rudd, J. J. 2019. Cell surface immune receptors: the guardians of the plant’s extracellular spaces. Current Opinion in Plant Biology. 50, pp. 1-8.

MSH2 is required for obligate crossover formation in wheat

C2 - Non-edited contributions to conferences
Ogle, D., Desjardins, S., Gutterman, I., Simmonds, J., Uauy, C., Kanyuka, K. and Higgins, J. D. 2019. MSH2 is required for obligate crossover formation in wheat. The Plant and Animal Genome XXVII Conference (PAG). San Diego, CA, USA 12 Jan 2019

The sources and dynamics of fine-grained sediment degrading the Freshwater Pearl Mussel (Margaritifera margaritifera) beds of the River Torridge, Devon, UK

A - Papers appearing in refereed journals
Pulley, S., Goubet, A., Mosser, I., Browning, S. and Collins, A. L. 2019. The sources and dynamics of fine-grained sediment degrading the Freshwater Pearl Mussel (Margaritifera margaritifera) beds of the River Torridge, Devon, UK. Science of The Total Environment. 657 (March 20), pp. 420-434.

Does the “high sugar” trait of perennial ryegrass cultivars express under temperate climate conditions?

A - Papers appearing in refereed journals
Rivero, M. J., Balocchi, O. A., Moscoso, C.J., Siebald, J. A., Neumann, F. L., Meyer, D. and Lee, M. R. F. 2019. Does the “high sugar” trait of perennial ryegrass cultivars express under temperate climate conditions? Grass and Forage Science.

Implications of crop model ensemble size and composition for estimates of adaptation effects and agreement of recommendations

A - Papers appearing in refereed journals
Rodriguez, A., Ruiz-Ramos, M., Palosuo, T., Carter, T. R., Fronzek, S., Lorite, I. J., Ferrise, R., Pirttioja, N., Bindi, M., Baronowski, P., Buis, S., Cammarano, D., Chen, Y., Dumont, B., Ewert, F., Gaiser, T., Hlavinka, P., Hoffman, H., Hohn, J. G., Jurecka, F., Kersebaum, K. C., Krzyszczak, J., Lana, M., Mechiche-Alami, A., Minet, J., Montesino, M., Nendel, C., Porter, J. R, Ruget, F., Semenov, M. A., Steinmetz, Z., Stratonovitch, P., Supit, I., Tao, F., Trnka, M., de Wit, A. and Rotter, R. P. 2019. Implications of crop model ensemble size and composition for estimates of adaptation effects and agreement of recommendations . Agricultural and Forest Meteorology. 264, pp. 351-362.

Climate change impact and adaptation for wheat protein

A - Papers appearing in refereed journals
Asseng, S., Martre, P., Maiorano, A., Rotter, R. P., O'Leary, G. J., Fitzgerald, G. J., Girousse, C., Motzo, R., Giunta, F., Babar, M. A., Reynolds, M. P., Kheir, A. M. S., Thorburn, P. J., Ruane, A. C., Waha, K, Aggarwal, P. K., Ahmed, M., Balkovic, J., Basso, B., Biernath, C., Bindi, M., Cammarano, D., Challinor, A. J., De Sanctis, D., Dumont, B., Eyshi Rezaei, E., Fereres, E., Ferrise, R., Garcia-Vila, M., Gayler, S., Gao, Y., Horan, H., Hoggenboom, G., Izaurralde, R. C., Jabloun, M., Jones, C., Kassie, B. T., Kersebaum, K-C., Klein, C., Koehler, A-K., Liu, B., Minoli, S., San Martin, M. M., Muller, C., Kumar, S. N., Nendel, C., Olesen, J. E., Palosuo, T., Porter, J., Priesack, E., Ripoche, D., Semenov, M. A., Stöckle, C., Stratonovitch, P., Streck, T., Supit, I., Tao, F., Van der Velde, M., Wallach, D., Wang, E., Webber, H., Wolf, J., Xiao, L., Zhang, Z., Zhao, Z., Zhu, Y. and Ewert, F. 2019. Climate change impact and adaptation for wheat protein. Global Change Biology. 25, pp. 155-173.

Investigating the importance of recreational roads as a sediment source in a mountainous catchment using a fingerprinting procedure with different multivariate statistical techniques and a Bayesian un-mixing model

A - Papers appearing in refereed journals
Nosrati, K. and Collins, A. L. 2019. Investigating the importance of recreational roads as a sediment source in a mountainous catchment using a fingerprinting procedure with different multivariate statistical techniques and a Bayesian un-mixing model. Journal of Hydrology. 569 (February), pp. 506-518.

A herbicide resistance risk matrix

A - Papers appearing in refereed journals
Moss, S. R., Ulber, L. and den Hoed, I. 2019. A herbicide resistance risk matrix. Crop Protection. 115 (January), pp. 13-19.

Sampling for disease absence-deriving informed monitoring from epidemic traits

A - Papers appearing in refereed journals
Bourhis, Y., Gottwald, T.R., Lopez-Ruiz, F.J., Patarapuwadol, S. and Van Den Bosch, F. 2019. Sampling for disease absence-deriving informed monitoring from epidemic traits. Journal of Theoretical Biology. 461, pp. 8-16.

A loop-mediated isothermal amplification (LAMP) assay for rapid and specific detection of airborne inoculum of Uromyces betae (sugar beet rust)

A - Papers appearing in refereed journals
Kaczmarek, A. M., King, K. M., West, J. S., Stevens, M., Sparkes, D. and Dickinson, M. 2019. A loop-mediated isothermal amplification (LAMP) assay for rapid and specific detection of airborne inoculum of Uromyces betae (sugar beet rust). Plant Disease.

Improved isotopic model based on 15N tracing and Rayleigh-type isotope fractionation for simulating differential sources of N2O emissions in a clay grassland soil

A - Papers appearing in refereed journals
Castellano-Hinojosa, A., Loick, N., Dixon, E. R., Matthews, P., Lewicka-Szczebak, D., Well, R., Bol, R., Charteris, A. and Cardenas, L. M. 2019. Improved isotopic model based on 15N tracing and Rayleigh-type isotope fractionation for simulating differential sources of N2O emissions in a clay grassland soil. Rapid Communications In Mass Spectrometry.

Responses of carbon, nitrogen and phosphorus to two consecutive drying–rewetting cycles in soils

A - Papers appearing in refereed journals
Pezzola, D., Cardenas, L. M., Mian, I.A., Carswell, A. M., Donovan, N., Dhanoa, D. and Blackwell, M. S. A. 2019. Responses of carbon, nitrogen and phosphorus to two consecutive drying–rewetting cycles in soils. Journal of Plant Nutrition and Soil Science.

Short-term air temperature forecasting using Nonparametric Functional Data Analysis and SARMA models

A - Papers appearing in refereed journals
Curceac, S., Ternynck, C., Ouarda, T. B. M. J, Chebana, F. and Niang, S. D. 2019. Short-term air temperature forecasting using Nonparametric Functional Data Analysis and SARMA models. Environmental Modelling & Software. 111, pp. 394-408.

Improving wheat as a source of iron and zinc for global nutrition

A - Papers appearing in refereed journals
Balk, J., Connorton J. M., Wan, Y., Lovegrove, A., Moore, K. L., Uauy, C., Sharp, P. A. and Shewry, P. R. 2019. Improving wheat as a source of iron and zinc for global nutrition. Nutrition Bulletin. pp. 1-7.

Oat and lipolysis: Food matrix effect

A - Papers appearing in refereed journals
Wilde, P. J., Garcia-Llatas, G., Lagarda, M. J, Haslam, R. P. and Grundy, M. M. L. 2019. Oat and lipolysis: Food matrix effect. Food Chemistry. 278 (25 April), pp. 683-691.

A framework for the regional critical zone classification: the case of the Chinese Loess Plateau

A - Papers appearing in refereed journals
Lu, Y, Hu, J, Fu, B., Harris, P., Wu, L., Tong, X., Bai, Y. and Comber, A. J. 2019. A framework for the regional critical zone classification: the case of the Chinese Loess Plateau . National Science Review. 16 (1), pp. 14-18.

Comparison of ammonia emissions related to nitrogen use efficiency of livestock production in Europe

A - Papers appearing in refereed journals
Groenestein, C.M., Hutchings, N.J., Haenel, H.D., Amon, B., Menzi, H., Mikkelsen, M.H., Misselbrook, T. H., van Bruggen, C., Kupper, T. and Webb, J. 2019. Comparison of ammonia emissions related to nitrogen use efficiency of livestock production in Europe. Journal of Cleaner Production. 211 (20 February), pp. 1162-1170.

A high-resolution map of soil pH in China made by hybrid modelling of sparse soil data and environmental covariates and its implications for pollution

A - Papers appearing in refereed journals
Chen, S., Liang, Z., Webster, R., Zhang, G., Zhou, Y., Teng, H., Hi, B., Arrouays, D. and Shi, Z. 2019. A high-resolution map of soil pH in China made by hybrid modelling of sparse soil data and environmental covariates and its implications for pollution. Science of The Total Environment. 655, pp. 273-283.

Modelling the effect of spatially variable soil properties on the distribution of weeds

A - Papers appearing in refereed journals
Metcalfe, H., Milne, A. E., Coleman, K., Murdoch, A. J. and Storkey, J. 2019. Modelling the effect of spatially variable soil properties on the distribution of weeds. Ecological Modelling. 396 (24 March), pp. 1-11.

Fate and transport of urea-N in a rain-fed ridge-furrow crop system with plastic mulch

A - Papers appearing in refereed journals
Guo, S., Jiang, R., Qu, H., Wang, Y., Misselbrook, T., Gunina, A. and Kuzyakov, Y. 2019. Fate and transport of urea-N in a rain-fed ridge-furrow crop system with plastic mulch . Soil & Tillage Research. 186 (March), pp. 214-223.

Field scale temporal and spatial variability of δ13C, δ15N, TC and TN soil properties : Implications for sediment source tracing

A - Papers appearing in refereed journals
Collins, A. L., Burak, E., Harris, P., Pulley, S., Cardenas L. and Tang, Q. 2019. Field scale temporal and spatial variability of δ13C, δ15N, TC and TN soil properties : Implications for sediment source tracing. Geoderma. 333, pp. 108-122.

Soil nitrous oxide emissions from grassland: potential inhibitor effect of hippuric acid

A - Papers appearing in refereed journals
Ciganda, V. S., Lopez-Aizpun, M., Repullo, M. A., Wu, D., Terra, J. A., Elustondo, D., Clough, T. and Cardenas, L. M. 2019. Soil nitrous oxide emissions from grassland: potential inhibitor effect of hippuric acid. Journal of Plant Nutrition and Soil Science. 182, pp. 40-47.

Assessment of empirical algorithms for bathymetry extraction using Sentinel-2 data

A - Papers appearing in refereed journals
Casal, G., Monteys, X., Hedley, J., Harris, P., Cahalane, C. and McCarthy, T. 2019. Assessment of empirical algorithms for bathymetry extraction using Sentinel-2 data. International Journal Of Remote Sensing.

Acrylamide in Food

E - Books edited/written by staff member, alone/with others
Halford, N. G. and Curtis, T. 2019. Acrylamide in Food. World Sci Publ Co Inc.

Quantifying the spatio-temporal drivers of planned vegetation restoration on ecosystem services at a large regional scale

A - Papers appearing in refereed journals
Liu, Y., Lu, Y., Fu, B-J., Harris, P. and Wu, L. 2019. Quantifying the spatio-temporal drivers of planned vegetation restoration on ecosystem services at a large regional scale. Science of The Total Environment. 650 (1), pp. 1029-1040.

Distance metric choice can both reduce and induce collinearity in geographically weighted regression

A - Papers appearing in refereed journals
Comber, A., Chi, K., Huy, M. Q., Nguyen, Q., Lu, B., Phe, H. H. and Harris, P. 2019. Distance metric choice can both reduce and induce collinearity in geographically weighted regression. Environment and Planning B: Urban Analytics and City Science.

A simulation study on specifying a regression model for spatial data: choosing between heterogeneity and autocorrelation effects

A - Papers appearing in refereed journals
Harris, P. 2019. A simulation study on specifying a regression model for spatial data: choosing between heterogeneity and autocorrelation effects. Geographical Analysis .

Determining the sources of nutrient flux to water in headwater catchments: Examining the speciation balance to inform the targeting of mitigation measures

A - Papers appearing in refereed journals
Lloyd, C. E. M., Johnes, P. J., Freer, J. E., Carswell, A. M., Jones, J. I., Stirling, M. W., Hodgkinson, R. A., Richmond, C. and Collins, A. L. 2019. Determining the sources of nutrient flux to water in headwater catchments: Examining the speciation balance to inform the targeting of mitigation measures. Science of The Total Environment. 648, pp. 1179-1200.

Soil health pilot study in England: outcomes from an on-farm earthworm survey

A - Papers appearing in refereed journals
Stroud, J. L. 2019. Soil health pilot study in England: outcomes from an on-farm earthworm survey. PLOS ONE. 14 (2), p. e0203909.

Legislation governing genetically modified (GM) and genome edited crops in Europe: The need for change

A - Papers appearing in refereed journals
Halford, N. G. 2019. Legislation governing genetically modified (GM) and genome edited crops in Europe: The need for change. Journal Of The Science Of Food And Agriculture. 99 (1), pp. 8-12.

The evolutionary origins of pesticide resistance

A - Papers appearing in refereed journals
Hawkins, N. J., Bass, C., Dixon, A. and Neve, P. 2019. The evolutionary origins of pesticide resistance. Biological Reviews of the Cambridge Philosophical Society. 94, pp. 135-155.

The importance of scale in spatially varying coefficient modelling

A - Papers appearing in refereed journals
Murakami, D., Lu, B., Harris, P., Brunsdon, C., Charlton, M., Nakaya, T. and Griffith, D. A. 2019. The importance of scale in spatially varying coefficient modelling. Annals of the American Association of Geographers.

When multi-functional landscape meets critical zone science: advancing multi-disciplinary research for sustainable human well-being

A - Papers appearing in refereed journals
Luo, Y., Lu, Y., Fu, B., Harris, P., Wu, L. and Comber, A. 2019. When multi-functional landscape meets critical zone science: advancing multi-disciplinary research for sustainable human well-being. National Science Review.

Soil compaction effects upon litter decomposition in an arable field and implications for management of crop residues and headlands

A - Papers appearing in refereed journals
Carlesso, L., Beadle, A., Cook, S. M., Graham, H., Ritz, K., Sparkes, D., Wu, L. and Murray, P. J. 2019. Soil compaction effects upon litter decomposition in an arable field and implications for management of crop residues and headlands. Applied Soil Ecology. 134, pp. 31-37.

Relating soil C and organic matter fractions to structural stability

A - Papers appearing in refereed journals
Jensen, J. L., Schjonning, P., Watts, C. W., Christensen, B. T., Peltre, C. and Munkholm, L. 2019. Relating soil C and organic matter fractions to structural stability. Geoderma. 337 (1 March), pp. 834-843.

Long-term effects of biosolids on soil quality and fertility

A - Papers appearing in refereed journals
Nicholson, F, Boghal, A., Taylor, M., McGrath, S. P. and Withers, P. 2018. Long-term effects of biosolids on soil quality and fertility. Soil Science. 183 (3), pp. 89-98.

The challenges of using satellite data sets to assess historical land use change and associated greenhouse gas emissions: a case study of three Indonesian provinces

A - Papers appearing in refereed journals
van Beijma, S., Chatterton, J., Page, S., Rawlings, C., Tiffin, R. and King. H. 2018. The challenges of using satellite data sets to assess historical land use change and associated greenhouse gas emissions: a case study of three Indonesian provinces. Carbon Management. 9, pp. 399-413.

An Exploration of the Function of Specific Components of the Predicted Secretome of Fusarium graminearum During Wheat Infection

F - Theses
Machado, A. 2018. An Exploration of the Function of Specific Components of the Predicted Secretome of Fusarium graminearum During Wheat Infection. F - Theses Rothamsted Research

Maize Chlorotic Mottle Virus Induces Changes in Host Plant Volatiles that Attract Vector Thrips Species

A - Papers appearing in refereed journals
Mwando, N. L., Tamiru, A., Nyasani, J. O., Obonyo, M. A. O., Caulfield, J. C., Bruce, T. J. A. and Subramanian, S. 2018. Maize Chlorotic Mottle Virus Induces Changes in Host Plant Volatiles that Attract Vector Thrips Species. Journal of Chemical Ecology. 44 (7-8), pp. 681-689.

Transgenic Microalgae With Increased Production Of At Least One Omega-3 Long Chain Polyunsaturated Fatty Acid (Patent US 2018/0312888 A1)

H2 - Patents applied for
Napier, J. A., Sayanova, O. V., Hamilton, M. L. and Vaezi, R. 2018. Transgenic Microalgae With Increased Production Of At Least One Omega-3 Long Chain Polyunsaturated Fatty Acid (Patent US 2018/0312888 A1) .

The impact of varying semantics in spatial statistics

C2 - Non-edited contributions to conferences
Comber, A., Harris, P. and Atkinson, P. M. 2018. The impact of varying semantics in spatial statistics. GISRUK 2018. Leicester

Development and application of a simple, rapid and sensitive method for detecting moderately carbendazim‐resistant isolates in Botrytis cinerea

A - Papers appearing in refereed journals
Duan, Y. B., Yang, Y., Li, M. X., Fraaije, B. A. and Zhou, M. G. 2018. Development and application of a simple, rapid and sensitive method for detecting moderately carbendazim‐resistant isolates in Botrytis cinerea. Annals of Applied Biology. 172 (3), pp. 355-365.

Desaturases And Process For The Production Of Polyunsaturated Fatty Acids In Transgenic Organisms (Patent) CA 2744930 C

H2 - Patents applied for
Napier, J. A., Senger, T. and Bauer, J. 2018. Desaturases And Process For The Production Of Polyunsaturated Fatty Acids In Transgenic Organisms (Patent) CA 2744930 C.

Analysis of Metals in Whole Cells, Thylakoids and Photosynthetic Protein Complexes in Synechocystis sp. PCC6803

A - Papers appearing in refereed journals
Gandini, C., Husted, S. and Schmidt, S. B. 2018. Analysis of Metals in Whole Cells, Thylakoids and Photosynthetic Protein Complexes in Synechocystis sp. PCC6803 . Bio-Protocol. 8 (12).

International Program to Monitor Cat Flea Populations for Susceptibility to Imidacloprid.

A - Papers appearing in refereed journals
Rust, M.K., Blagburn, B. L., Denholm, I., Dryden, M. W., Payne, P., Kopp, S. and Williamson, M. S. 2018. International Program to Monitor Cat Flea Populations for Susceptibility to Imidacloprid. Journal of Medical Entomology. 55 (5), pp. 1245-1253.

Optimising sulphur management to maximise oilseed rape yields and farm profitability (OPTI-S)

E - Books edited/written by staff member, alone/with others
Saggo, E., Berry, P., Munro, D, Williams, J.R., McGrath, S. P. and Dunham, S. J. 2018. Optimising sulphur management to maximise oilseed rape yields and farm profitability (OPTI-S). Kenilworth HGCA/AHDB, Stoneleigh.

Metabolomic-Guided Isolation of Bioactive Natural Products from Curvularia sp., an Endophytic Fungus of Terminalia laxiflora

A - Papers appearing in refereed journals
Tawfike, A. F., Abbott, G., Young, L. and Edrada-Ebel, R. 2018. Metabolomic-Guided Isolation of Bioactive Natural Products from Curvularia sp., an Endophytic Fungus of Terminalia laxiflora. Planta Medica. 84 (3), pp. 182-190.

Final grain weight is not limited by the activity of key starch-synthesising enzymes during grain filling in wheat

A - Papers appearing in refereed journals
Fahy, B., Siddiqui, H., David, L., Powers, S. J., Borrill, P., Uauy, C. and Smith, A. 2018. Final grain weight is not limited by the activity of key starch-synthesising enzymes during grain filling in wheat. Journal of Experimental Botany. 69 (22), p. 5461–5475.

In search of artificial domatia for predatory mites

A - Papers appearing in refereed journals
Bresch, C., Carlesso, L., Suay, R., Van Oudenhove, L., Touzeau, S., Fatnassi, H., Ottenwaelder, L., Paris, B., Poncet, C., Maileret, L., Messelink, G. and Parolin, P. 2018. In search of artificial domatia for predatory mites. Biocontrol Science and Technology. 29 (2), pp. 131-148.

The factors driving evolved herbicide resistance at a national scale

A - Papers appearing in refereed journals
Hicks, H., Comont, D., Coutts, S. R., Crook, L., Hull, R. I., Norris, K., Neve, P., Childs, D. Z. and Freckleton, R. 2018. The factors driving evolved herbicide resistance at a national scale. Nature Ecology & Evolution. 2, pp. 529-536.

Understanding the Relative Impacts of Climate Change on Crop Production using Data from the Rothamsted Long-Term Experiments

F - Theses
Addy, J. 2018. Understanding the Relative Impacts of Climate Change on Crop Production using Data from the Rothamsted Long-Term Experiments. F - Theses University of Reading CAS

Nitrogen functional gene activity in soil profiles under progressive vegetative recovery after abandonment of agriculture at the Puding Karst Critical Zone Observatory, SW China

A - Papers appearing in refereed journals
Li, D., Zhang, X., Green, s., Dungait, J. A. J., Wen, X., Tang, Y., Guo, Z., Yang, Y., Sun, X. and Quine, T. 2018. Nitrogen functional gene activity in soil profiles under progressive vegetative recovery after abandonment of agriculture at the Puding Karst Critical Zone Observatory, SW China. Soil Biology and Biochemistry. 125, pp. 93-102.

Laminitis in dairy goats (Capra aegagrus hircus) on a low-forage diet

A - Papers appearing in refereed journals
Groenevelt, M., Anzuino, K., Cahalan, S. D., Hunt, N., Lee, M. R. F. and Grogono-Thomas, R. 2018. Laminitis in dairy goats (Capra aegagrus hircus) on a low-forage diet. Veterinary Record Case Report. 6 (4), p. e000652.

Using virulence mutants to Identify Avr genes in the wheat stem rust fungus, Puccinia graminis f. sp. tritici

C1 - Edited contributions to conferences/learned societies
Upadhyaya, N. M., Ortiz, D., Chen, J., Ellis, J., Li, F., Mago, R., Kanyuka, K., Figueroa, M., Park, R. F. and Dodds, P. 2018. Using virulence mutants to Identify Avr genes in the wheat stem rust fungus, Puccinia graminis f. sp. tritici. International Congress of Plant Pathology (ICPP) 2018. Boston, USA 29 Jul 2018 Amer Phytopathological Soc.

Replacing a permanent pasture and its effect in the first year on a commercial dairy farm

A - Papers appearing in refereed journals
Rivero-Viera, J., Orr, R. J., Coumbe, J., Willson, B., Evans, J. and Lee, M. R. F. 2018. Replacing a permanent pasture and its effect in the first year on a commercial dairy farm. Agro Sur. 46 (1), pp. 3-12.

Creating productive diverse grassland for multi-ecosystem services: an example of agri-environment schemes policies driven by science in United Kingdom

A - Papers appearing in refereed journals
Beaumont, D. A., Griffith, B. A., Dunn, R. M., Orr, R. J., Rivero-Viera, J., Woodcock, B., Pywell, R. and Tallowin, J. R. B. 2018. Creating productive diverse grassland for multi-ecosystem services: an example of agri-environment schemes policies driven by science in United Kingdom. Agro Sur. 46 (2), pp. 3-5.

Water stress in maize production in the drylands of the Loess Plateau

A - Papers appearing in refereed journals
Zhu, W., Li, H.J., Qu, H.C., Wang, Y.L., Misselbrook, T., Li, X. and Jiang, R. 2018. Water stress in maize production in the drylands of the Loess Plateau. Vadose Zone Journal. 17 (1).

Bed and suspended sediment-associated rare earth element concentrations and fluxes in a polluted Brazilian river system

A - Papers appearing in refereed journals
da Silva, Y., Nascimento, C., da Silva, Y., Amorim, F., Singh, V. and Collins, A. L. 2018. Bed and suspended sediment-associated rare earth element concentrations and fluxes in a polluted Brazilian river system . Environmental Science and Pollution Research. 25 (34), pp. 34426-34437.

A new method to trace colloid transport pathways in macroporous soils using X‐ray computed tomography and fluorescence macrophotography

A - Papers appearing in refereed journals
Soto-Gomez, D., Perez‐Rodriguez, P., Vazquez Juiz, L., Lopez‐Periago, J. E. and Paradelo, M. 2018. A new method to trace colloid transport pathways in macroporous soils using X‐ray computed tomography and fluorescence macrophotography. European Journal Of Soil Science.

Europe’s first and last field trial of gene-edited plants?

A - Papers appearing in refereed journals
Faure, J-D. and Napier, J. A. 2018. Europe’s first and last field trial of gene-edited plants? eLife. 7 (e42379).

Insect population trends and the IUCN Red List process

A - Papers appearing in refereed journals
Fox, R., Harrower, C.A., Bell, J. R., Shortall, C. R., Middlebrook, I. and Wilson, R.J. 2018. Insect population trends and the IUCN Red List process. Journal of Insect Conservation.

Identification and functional analysis of two P450 enzymes of Gossypium hirsutum involved in DMNT and TMTT biosynthesis

A - Papers appearing in refereed journals
Liu, D., Huang, X., Jing, W., An, X., Zhang, Q., Zhang, H., Zhou, J-J., Zhang, Y. and Guo, Y. 2018. Identification and functional analysis of two P450 enzymes of Gossypium hirsutum involved in DMNT and TMTT biosynthesis. Plant Biotechnology Journal. 16 (2), pp. 581-590.

Odorant receptors and odorant-binding proteins as insect pest control targets: a comparative analysis

A - Papers appearing in refereed journals
Venthur, H. and Zhou, J-J. 2018. Odorant receptors and odorant-binding proteins as insect pest control targets: a comparative analysis. Frontiers in Physiology. 9, p. 01163.

Pyrolysis temperature during biochar production alters its subsequent utilization by microorganisms in an acid arable soil

A - Papers appearing in refereed journals
Luo, Y., Dungait, J. A. J., Zhao, X., Brookes, P. C., Durenkamp, M., Li, G. and Lin, Q. 2018. Pyrolysis temperature during biochar production alters its subsequent utilization by microorganisms in an acid arable soil. Land Degradation & Development. 29 (7), pp. 2183-2188.

The potential for production of high quality bio-coal from early harvested Miscanthus by hydrothermal carbonisation

A - Papers appearing in refereed journals
Smith, A. M., Whittaker, C., Shield, I. F. and Ross, A. B. 2018. The potential for production of high quality bio-coal from early harvested Miscanthus by hydrothermal carbonisation. Fuel. 220 (15 May), pp. 546-557.

Intercropping flowering plants in maize systems increases pollinator diversity

A - Papers appearing in refereed journals
Norris, S. L., Blackshaw, R. P., Critchley, C. N. R., Dunn, R. M., Smith, K. E., Williams, J., Randall, N. P. and Murray, P. J. 2018. Intercropping flowering plants in maize systems increases pollinator diversity. Agricultural and Forest Entomology. 20 (2), pp. 246-254.

Fungal G-protein-coupled receptors: mediators of pathogenesis and targets for disease control

A - Papers appearing in refereed journals
Brown, N. A., Schrevens, S., Van Dijck, P. and Goldman, G. H. 2018. Fungal G-protein-coupled receptors: mediators of pathogenesis and targets for disease control. Nature Microbiology. 3 (4), pp. 402-414.

Attribution of explanatory factors for change in soil organic carbon density in the native grasslands of Inner Mongolia, China

A - Papers appearing in refereed journals
Jin, D., Murray, P. J., Xin, X., Qin, Y., Chen, B., Qing, G., Zhang, Z. and Yan, R. 2018. Attribution of explanatory factors for change in soil organic carbon density in the native grasslands of Inner Mongolia, China. Journal of Arid Land. 10 (3), pp. 375-387.

Using epidemiological principles to explain fungicide resistance management tactics: why do mixtures outperform alternations?

A - Papers appearing in refereed journals
Elderfield, J. A. D., Lopez-Ruiz, F. J., Van Den Bosch, F. and Cunniffe, N. J. 2018. Using epidemiological principles to explain fungicide resistance management tactics: why do mixtures outperform alternations? Phytopathology. 108 (7), pp. 803-817.