Levels of rhizome endophytic fungi fluctuate in Paris polyphylla var. yunnanensis as plants age

A - Papers appearing in refereed journals

Liu, T., Greenslade, A. F. C. and Yang, S. 2017. Levels of rhizome endophytic fungi fluctuate in Paris polyphylla var. yunnanensis as plants age. Plant Diversity. 39 (1), pp. 60-64.

AuthorsLiu, T., Greenslade, A. F. C. and Yang, S.

Paris polyphylla var. yunnanensis is an important medicinal plant with abundant saponins that are widely used in the pharmaceuticals industry. It is unclear why the levels of active ingredients increase as these plants age. We speculated that the concentrations of those components in the rhizomes are mediated by fungal endophytes. To test this hypothesis, we took both culture-dependent and -independent (metagenomics) approaches to analyze the communities of endophytic fungi that inhabit those rhizomes in plants of different age classes (four, six, and eight years old). In all, 147 isolates representing 18 fungal taxa were obtained from 270 segments (90 per age class). Based on morphological and genetic characteristics, Fusarium oxysporum (46.55% frequency of occurrence) was the predominant endophyte, followed by Leptodontidium sp. (8.66%) and Trichoderma viride (6.81%). Colonization of endophytic fungi was maximized in the eight-year-old rhizomes (33.33%) when compared with four-year-old (21.21%) and six-year-old (15.15%) rhizomes. Certain fungal species were present only at particular ages. For example, Alternaria sp., Cylindrocarpon sp., Chaetomium sp., Paraphaeosphaeria sporulosa, Pyrenochaeta sp., Penicillium swiecickii, T. viride, and Truncatella angustata were found only in the oldest plants. Analysis of (metagenomics) community DNA extracted from different-aged samples revealed that, at the class level, the majority of fungi had the highest sequence similarity to members of Sordariomycetes, followed by Eurotiomycetes and Saccharomycetes. These results were mostly in accord with those we obtained using culture methods. Fungal diversity and richness also changed over time. Our investigation is the first to show that the diversity of fungi in rhizomes of P. polyphylla var. yunnanensis is altered as plants age, and our findings provide a foundation for future examinations of useful compounds.

KeywordsMedicinal Plants; endophytic fungi; Paris polyphylla var. yunnanensis
Year of Publication2017
JournalPlant Diversity
Journal citation39 (1), pp. 60-64
Digital Object Identifier (DOI)doi:10.1016/j.pld.2016.11.006
Open accessPublished as ‘gold’ (paid) open access
Publisher's version
Output statusPublished
Publication dates
Online25 Nov 2016
Publication process dates
Accepted21 Nov 2016
Copyright licenseCC BY

Permalink - https://repository.rothamsted.ac.uk/item/8w13v/levels-of-rhizome-endophytic-fungi-fluctuate-in-paris-polyphylla-var-yunnanensis-as-plants-age

15 total views
4 total downloads
0 views this month
0 downloads this month
Download files as zip