QTLNetMiner: Mining Candidate Gene Networks From Genetic Studies of Crops and Animals

Project (past)

Project dates01 Aug 2011 to end of 02 Mar 2013
Researchers
Principal InvestigatorChris Rawlings
FunderBiotechnology and Biological Sciences Research Council
Project numberS5157
5157
DepartmentBiomathematics and Bioinformatics (BAB)
Research fish codeBB/I023860/1
Grant IDBB/I023860/1

Outputs

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KnetMiner - An integrated data platform for gene mining and biological knowledge discovery

F - Theses
Hassani-Pak, K. 2017. KnetMiner - An integrated data platform for gene mining and biological knowledge discovery. F - Theses Rothamsted Research Computational and Analytical Sciences

Developing integrated crop knowledge networks to advance candidate gene discovery

A - Papers appearing in refereed journals
Hassani-Pak, K., Castellote, M., Esch, M., Hindle, M. M., Lysenko, A., Taubert, J. and Rawlings, C. J. 2016. Developing integrated crop knowledge networks to advance candidate gene discovery. Applied and Translational Genomics. 11 (December), pp. 18-26. https://doi.org/10.1016/j.atg.2016.10.003

Interactive exploration of integrated biological datasets using context-sensitive workflows

A - Papers appearing in refereed journals
Horn, F., Rittweger, M., Taubert, J., Lysenko, A., Rawlings, C. J. and Guthke, R. 2014. Interactive exploration of integrated biological datasets using context-sensitive workflows. Frontiers in Genetics. 5, p. 21. https://doi.org/10.3389/fgene.2014.00021

Ondex Web: web-based visualization and exploration of heterogeneous biological networks

A - Papers appearing in refereed journals
Taubert, J., Hassani-Pak, K., Castells-Brooke, N. I. D. and Rawlings, C. J. 2014. Ondex Web: web-based visualization and exploration of heterogeneous biological networks. Bioinformatics. 30, pp. 1034-1035. https://doi.org/10.1093/bioinformatics/btt740