Soil protection and remediation

Project (past)

Project dates01 Apr 2008 to end of 31 Mar 2012
Researchers
Principal InvestigatorSteve McGrath
FunderBiotechnology and Biological Sciences Research Council
Project number4981
S4981
DepartmentSustainable Soils and Grassland Systems (SSGS)
Research fish codeBBS/E/C/00004981
Grant IDBBS/E/C/00004981

Outputs

Sort by: Date Title

Accumulation, distribution and speciation of arsenic in wheat grain

A - Papers appearing in refereed journals
Zhao, F-J., Stroud, J. L., Eagling, T., Dunham, S. J., McGrath, S. P. and Shewry, P. R. 2010. Accumulation, distribution and speciation of arsenic in wheat grain. Environmental Science & Technology. 44 (14), pp. 5464-5468. https://doi.org/10.1021/es100765g

Arsenic as a food chain contaminant: mechanisms of plant uptake and metabolism and mitigation strategies

A - Papers appearing in refereed journals
Zhao, F-J., McGrath, S. P. and Meharg, A. A. 2010. Arsenic as a food chain contaminant: mechanisms of plant uptake and metabolism and mitigation strategies. Annual Review of Plant Biology. 61, pp. 535-559. https://doi.org/10.1146/annurev-arplant-042809-112152

Arsenic shoot-grain relationships in field grown rice cultivars

A - Papers appearing in refereed journals
Norton, G. J., Islam, M. R., Duan, G., Lei, M., Zhu, Y., Deacon, C. M., Moran, A. C., Islam, S., Zhao, F-J., Stroud, J. L., McGrath, S. P., Feldmann, J., Price, A. H. and Meharg, A. A. 2010. Arsenic shoot-grain relationships in field grown rice cultivars. Environmental Science & Technology. 44 (4), pp. 1471-1477. https://doi.org/10.1021/es902992d

Arsenic translocation in rice investigated using radioactive 73As tracer

A - Papers appearing in refereed journals
Zhao, F-J., Stroud, J. L., Khan, M. A. and McGrath, S. P. 2012. Arsenic translocation in rice investigated using radioactive 73As tracer. Plant and Soil. 350 (1-2), pp. 413-420. https://doi.org/10.1007/s11104-011-0926-4

Arsenite efflux is not enhanced in the arsenate-tolerant phenotype of Holcus lanatus

A - Papers appearing in refereed journals
Logoteta, B., Xu, X-Y., Macnair, M. R., McGrath, S. P. and Zhao, F-J. 2009. Arsenite efflux is not enhanced in the arsenate-tolerant phenotype of Holcus lanatus. New Phytologist. 183 (2), pp. 340-348. https://doi.org/10.1111/j.1469-8137.2009.02841.x

Assessing the labile arsenic pool in contaminated paddy soils by isotopic dilution techniques and simple extractions

A - Papers appearing in refereed journals
Stroud, J. L., Khan, M. A., Norton, G. J., Islam, M. R., Dasgupta, T., Zhu, Y-G., Price, A. H., Meharg, A. A., McGrath, S. P. and Zhao, F-J. 2011. Assessing the labile arsenic pool in contaminated paddy soils by isotopic dilution techniques and simple extractions. Environmental Science & Technology. 45, pp. 4262-4269. https://doi.org/10.1021/es104080s

Assessment of chemical and biochemical stabilization of organic C in soils from the long-term experiments at Rothamsted (UK)

A - Papers appearing in refereed journals
De Nobili, M., Contin, M., Mahieu, N., Randall, E. W. and Brookes, P. C. 2008. Assessment of chemical and biochemical stabilization of organic C in soils from the long-term experiments at Rothamsted (UK). Waste Management. 28, pp. 723-733. https://doi.org/10.1016/j.wasman.2007.09.025

Beneficial elements

B - Book chapters etc edited externally
Broadley, M., Brown, P., Cakmak, I., Ma, J. F., Rengel, Z. and Zhao, F-J. 2012. Beneficial elements. in: Marschner, P. (ed.) Marschner's mineral nutrition of higher plants, 3rd ed Academic Press, London. pp. 249-269

Benzoxazinoids in root exudates of maize attract Pseudomonas putida to the rhizosphere

A - Papers appearing in refereed journals
Neal, A. L., Ahmad, S., Gordon-Weeks, R. and Ton, J. 2012. Benzoxazinoids in root exudates of maize attract Pseudomonas putida to the rhizosphere. PLOS ONE. 7, p. e35498 (10pp). https://doi.org/10.1371/journal.pone.0035498

Bioavailability of metals and organic contaminants in soils

C2 - Non-edited contributions to conferences
McGrath, S. P. and Semple, K. T. 2010. Bioavailability of metals and organic contaminants in soils. Proceedings 19th World Congress of Soil Science: Soil Solutions for a Changing World, Brisbane, 1-6 August 2010 . pp. 20-23

Biofortification of zinc in wheat grain by the application of sewage sludge

A - Papers appearing in refereed journals
McGrath, S. P., Chambers, B. J., Taylor, M. J. and Carlton-Smith, C. H. 2012. Biofortification of zinc in wheat grain by the application of sewage sludge. Plant and Soil. 361, pp. 97-108. https://doi.org/10.1007/s11104-012-1381-6

Can the soil bacterium Cupriavidus necator sense ZnO nanomaterials and aqueous Zn2+ differentially?

A - Papers appearing in refereed journals
Neal, A. L., Kabengi, N., Grider, A. and Bertsch, P. M. 2012. Can the soil bacterium Cupriavidus necator sense ZnO nanomaterials and aqueous Zn2+ differentially? Nanotoxicology. 6, pp. 371-380. https://doi.org/10.3109/17435390.2011.579633

Complexation of arsenite with phytochelatins reduces arsenite efflux and translocation from roots to shoots in Arabidopsis

A - Papers appearing in refereed journals
Liu, W-J., Wood, B. A., Raab, A., McGrath, S. P., Zhao, F-J. and Feldmann, J. 2010. Complexation of arsenite with phytochelatins reduces arsenite efflux and translocation from roots to shoots in Arabidopsis. Plant Physiology. 152, pp. 2211-2221. https://doi.org/10.1104/pp.109.150862

Development of a real-time PCR assay for detection and quantification of Rhizobium leguminosarum bacteria and discrimination between different biovars in zinc-contaminated soil

A - Papers appearing in refereed journals
Macdonald, C. A., Clark, I. M., Hirsch, P. R., Zhao, F-J. and McGrath, S. P. 2011. Development of a real-time PCR assay for detection and quantification of Rhizobium leguminosarum bacteria and discrimination between different biovars in zinc-contaminated soil. Applied and Environmental Microbiology. 77, pp. 4626-4633. https://doi.org/10.1128/AEM.02232-10

Distinguishing diffusional and plant control of Cd and Ni uptake by hyperaccumulator and nonhyperaccumulator plants

A - Papers appearing in refereed journals
Luo, J., Zhang, H., Zhao, F-J. and Davison, W. 2010. Distinguishing diffusional and plant control of Cd and Ni uptake by hyperaccumulator and nonhyperaccumulator plants. Environmental Science & Technology. 44, pp. 6636-6641. https://doi.org/10.1021/es100371d

Editorial: Chinese virtual issue

A - Papers appearing in refereed journals
Pan, B., Wang, Q. and Zhao, F-J. 2012. Editorial: Chinese virtual issue. European Journal of Soil Science. 63 (6), pp. 773-775. https://doi.org/10.1111/ejss.12011

Effect of nitrogen form on the rhizosphere dynamics and uptake of cadmium and zinc by the hyperaccumulator Thlaspi caerulescens

A - Papers appearing in refereed journals
Xie, H. L., Jiang, R. F., Zhang, F-S., McGrath, S. P. and Zhao, F-J. 2009. Effect of nitrogen form on the rhizosphere dynamics and uptake of cadmium and zinc by the hyperaccumulator Thlaspi caerulescens. Plant and Soil. 318, pp. 205-215. https://doi.org/10.1007/s11104-008-9830-y

Effects of Cd- and Zn-enriched sewage sludge on soil bacterial and fungal communities

A - Papers appearing in refereed journals
Gomes, N. C. M., Landi, L., Smalla, K., Nannipieri, P., Brookes, P. C. and Renella, G. 2010. Effects of Cd- and Zn-enriched sewage sludge on soil bacterial and fungal communities. Ecotoxicology and Environmental Safety. 73, pp. 1255-1263. https://doi.org/10.1016/j.ecoenv.2010.07.027

Environmental and genetic control of arsenic accumulation and speciation in rice grain: comparing a range of common cultivars grown in contaminated sites across Bangladesh, China and India

A - Papers appearing in refereed journals
Norton, G. J., Duan, G., Dasgupta, T., Islam, M. R., Lei, M., Zhu, Y., Deacon, C. M., Moran, A. C., Islam, S., Zhao, F-J., Stroud, J. L., McGrath, S. P., Feldmann, J., Price, A. H. and Meharg, A. A. 2009. Environmental and genetic control of arsenic accumulation and speciation in rice grain: comparing a range of common cultivars grown in contaminated sites across Bangladesh, China and India. Environmental Science & Technology. 43, pp. 8381-8386. https://doi.org/10.1021/es901844q

Evaluation of an electrostatic toxicity model for predicting Ni2+ toxicity to barley root elongation in hydroponic cultures and in soils

A - Papers appearing in refereed journals
Wang, P., Kopittke, P. M., De Schamphelaere, K. A. C., Zhao, F-J., Zhou, D-M., Lock, K., Ma, Y-B., Peijnenburg, W. J. G. M. and McGrath, S. P. 2011. Evaluation of an electrostatic toxicity model for predicting Ni2+ toxicity to barley root elongation in hydroponic cultures and in soils. New Phytologist. 192 (2), pp. 414-427. https://doi.org/10.1111/j.1469-8137.2011.03806.x

Feasibility of phytoextraction to remediate cadmium and zinc contaminated soils

A - Papers appearing in refereed journals
Koopmans, G. F., Romkens, P. F. A. M., Fokkema, M. J., Song, J., Luo, Y. M., Japenga, J. and Zhao, F-J. 2008. Feasibility of phytoextraction to remediate cadmium and zinc contaminated soils. Environmental Pollution. 156 (3), pp. 905-914. https://doi.org/10.1016/j.envpol.2008.05.029

Floral climatic and soil pH controls on leaf ash content in China's terrestrial plants

A - Papers appearing in refereed journals
Han, W., Chen, Y., Zhao, F-J., Tang, L., Jiang, R. and Zhang, F. 2012. Floral climatic and soil pH controls on leaf ash content in China's terrestrial plants. Global Ecology and Biogeography. 21 (3), pp. 376-382. https://doi.org/10.1111/j.1466-8238.2011.00677.x

Function of nutrients: micronutrients

B - Book chapters etc edited externally
Broadley, M., Brown, P., Cakmak, I., Rengel, Z. and Zhao, F-J. 2012. Function of nutrients: micronutrients. in: Marschner, P. (ed.) Marschner's mineral nutrition of higher plants, 3rd ed Academic Press, London. pp. 191-248

Genetically engineering Bacillus subtilis with a heat-resistant arsenite methyltransferase for bioremediation of arsenic-contaminated organic waste

A - Papers appearing in refereed journals
Huang, K., Chen, C., Shen, Q., Rosen, B. P. and Zhao, F-J. 2015. Genetically engineering Bacillus subtilis with a heat-resistant arsenite methyltransferase for bioremediation of arsenic-contaminated organic waste. Applied and Environmental Microbiology. 81, pp. 6718-6724. https://doi.org/10.1128/AEM.01535-15

Heavy metals and soil microbes

A - Papers appearing in refereed journals
Giller, K. E., Witter, E. and McGrath, S. P. 2009. Heavy metals and soil microbes. Soil Biology and Biochemistry. 41, pp. 2031-2037. https://doi.org/10.1016/j.soilbio.2009.04.026

Heterologous expression of the yeast arsenite efflux system ACR3 improves Arabidopsis thaliana tolerance to arsenic stress

A - Papers appearing in refereed journals
Ali, W., Isner, J-C., Isayenkov, S. V., Liu, W., Zhao, F-J. and Maathuis, F. J. M. 2012. Heterologous expression of the yeast arsenite efflux system ACR3 improves Arabidopsis thaliana tolerance to arsenic stress. New Phytologist. 194 (3), pp. 716-723. https://doi.org/10.1111/j.1469-8137.2012.04092.x

Identification and functional analysis of two ZIP metal transporters of the hyperaccumulator Thlaspi caerulescens

A - Papers appearing in refereed journals
Wu, J., Zhao, F-J., Ghandilyan, A., Logoteta, B., Guzman, M. O., Schat, H., Wang, X. and Aarts, M. G. M. 2009. Identification and functional analysis of two ZIP metal transporters of the hyperaccumulator Thlaspi caerulescens. Plant and Soil. 325, pp. 79-95. https://doi.org/10.1007/s11104-009-0151-6

Identifying the species of copper that are toxic to plant roots in alkaline nutrient solutions

A - Papers appearing in refereed journals
Wang, P., Menzies, N. W., Wang, Y-M., Zhou, D-M., Zhao, F-J. and Kopittke, P. M. 2012. Identifying the species of copper that are toxic to plant roots in alkaline nutrient solutions. Plant and Soil. 361, pp. 317-327. https://doi.org/10.1007/s11104-012-1260-1

Investigating the contribution of the phosphate transport pathway to arsenic accumulation in rice

A - Papers appearing in refereed journals
Wu, Z., Ren, H., McGrath, S. P., Wu, P. and Zhao, F-J. 2011. Investigating the contribution of the phosphate transport pathway to arsenic accumulation in rice. Plant Physiology. 157, pp. 498-508. https://doi.org/10.1104/pp.111.178921

Knocking out ACR2 does not affect arsenic redox status in Arabidopsis thaliana: implications for As detoxification and accumulation in plants

A - Papers appearing in refereed journals
Liu, W., Schat, H., Bliek, M., Chen, Y., McGrath, S. P., George, G., Salt, D. E. and Zhao, F-J. 2012. Knocking out ACR2 does not affect arsenic redox status in Arabidopsis thaliana: implications for As detoxification and accumulation in plants. PLOS ONE. 7, p. e42408. https://doi.org/10.1371/journal.pone.0042408

Long-term impacts of zinc and copper enriched sewage sludge additions on bacterial, archaeal and fungal communities in arable and grassland soils

A - Papers appearing in refereed journals
Macdonald, C. A., Clark, I. M., Zhao, F-J., Hirsch, P. R., Singh, B. K. and McGrath, S. P. 2011. Long-term impacts of zinc and copper enriched sewage sludge additions on bacterial, archaeal and fungal communities in arable and grassland soils. Soil Biology and Biochemistry. 43, pp. 932-941. https://doi.org/10.1016/j.soilbio.2011.01.004

Long-term removal of wheat straw decreases soil amorphous silica at Broadbalk winter wheat experiment, Rothamsted

C2 - Non-edited contributions to conferences
Guntzer, F., Keller, C., Poulton, P. R., McGrath, S. P. and Meunier, J-D. 2012. Long-term removal of wheat straw decreases soil amorphous silica at Broadbalk winter wheat experiment, Rothamsted. Abstracts 4th International Congress Eurosoil 2012, Bari, 2-6 July 2012 . pp. 80

Low biodegradability of fluoxetine HC1, diazepam and their human metabolites in sewage sludge-amended soil

A - Papers appearing in refereed journals
Redshaw, C. H., Cooke, M. P., Talbot, H. M., McGrath, S. P. and Rowland, S. J. 2008. Low biodegradability of fluoxetine HC1, diazepam and their human metabolites in sewage sludge-amended soil. Journal of Soils and Sediments. 8, pp. 217-230. https://doi.org/10.1007/s11368-008-0024-2

Magnetite biomineralization induced by Shewanella oneidensis

A - Papers appearing in refereed journals
Perez-Gonzalez, T., Jimenez-Lopez, C., Neal, A. L., Rull-Perez, F., Rodriguez-Navarro, A., Fernandez-Vivas, A. and Ianez-Pareja, E. 2010. Magnetite biomineralization induced by Shewanella oneidensis. Geochimica et Cosmochimica Acta. 74, pp. 967-979. https://doi.org/10.1016/j.gca.2009.10.035

Measurement of zinc stable isotope ratios in biogeochemical matrices by double-spike MC-ICPMS and determination of the isotope ratio pool available for plants from soil

A - Papers appearing in refereed journals
Arnold, T., Schonbachler, M., Rehkamper, M., Dong, S., Zhao, F-J., Kirk, G. J. D., Coles, B. J. and Weiss, D. J. 2010. Measurement of zinc stable isotope ratios in biogeochemical matrices by double-spike MC-ICPMS and determination of the isotope ratio pool available for plants from soil. Analytical and Bioanalytical Chemistry. 398, pp. 3115-3125. https://doi.org/10.1007/s00216-010-4231-5

Mediated amperometric whole-cell biosensors for rapid in situ screening of heavy metal contaminated soils

C2 - Non-edited contributions to conferences
Ding, Y. R., Zhang, T., McGrath, S. P. and Rawson, D. 2008. Mediated amperometric whole-cell biosensors for rapid in situ screening of heavy metal contaminated soils. Luo, Y. M. (ed.) Proceedings 3rd International Conference on Soil Pollution and Remediation, Nanjing, 18-21 October 2008 . pp. 11-12

Methylated arsenic species in plants originate from soil microorganisms

A - Papers appearing in refereed journals
Lomax, C., Liu, W-J., Wu, Liyou, Xue, K., Xiong, J., Zhou, J., McGrath, S. P., Meharg, A. A., Miller, A. J. and Zhao, F-J. 2012. Methylated arsenic species in plants originate from soil microorganisms. New Phytologist. 193 (3), pp. 665-672. https://doi.org/10.1111/j.1469-8137.2011.03956.x

Mitigation of arsenic accumulation in rice with water management and silicon fertilization

A - Papers appearing in refereed journals
Li, R-Y., Stroud, J. L., Ma, J. F., McGrath, S. P. and Zhao, F-J. 2009. Mitigation of arsenic accumulation in rice with water management and silicon fertilization. Environmental Science & Technology. 43 (10), pp. 3778-3783. https://doi.org/10.1021/es803643v

Mobility and survival of Salmonella Typhimurium and human adenovirus from spiked sewage sludge applied to soil columns

A - Papers appearing in refereed journals
Horswell, J., Hewitt, J., Prosser, J., Van Schaik, A., Croucher, D., Macdonald, C., Burford, P., Susarla, P., Bickers, P. and Speir, T. 2010. Mobility and survival of Salmonella Typhimurium and human adenovirus from spiked sewage sludge applied to soil columns. Journal of Applied Microbiology. 108 (1), pp. 104-114. https://doi.org/10.1111/j.1365-2672.2009.04416.x

Modelling phytoremediation by the hyperaccumulating fern, Pteris vittata , of soils historically contaminated with arsenic

A - Papers appearing in refereed journals
Shelmerdine, P. A., Black, C. R., McGrath, S. P. and Young, S. D. 2009. Modelling phytoremediation by the hyperaccumulating fern, Pteris vittata , of soils historically contaminated with arsenic. Environmental Pollution. 157, pp. 1589-1596. https://doi.org/10.1016/j.envpol.2008.12.029