CAS: Genomics and Bioinformatics
| Title | CAS: Genomics and Bioinformatics |
|---|---|
| Type | Research cluster |
Outputs
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QTL mapping of enzymatic saccharification in short rotation coppice willow and its independence from biomass yield
A - Papers appearing in refereed journals
Brereton, N. J. B., Pitre, F. E., Hanley, S. J., Ray, M. J., Karp, A. and Murphy, R. J. 2010. QTL mapping of enzymatic saccharification in short rotation coppice willow and its independence from biomass yield. BioEnergy Research. 3 (3), pp. 251-261. https://doi.org/10.1007/s12155-010-9077-3
Climate change and arable crop disease control: mitigation and adaptation
C2 - Non-edited contributions to conferences
Fitt, B. D. L., Evans, N., Gladders, P., Hughes, D. J., Madgwick, J. W., Jeger, J., Townsend, J. A., Turner, J. A. and West, J. S. 2010. Climate change and arable crop disease control: mitigation and adaptation. Abstracts 16th International Reinhardsbrunn Symposium: Modern Fungicides and Antifungal Compounds, Friedrichroda, 25-29 April 2010 . pp. 18
Enhancing data integration with text analysis to find proteins implicated in plant stress response
A - Papers appearing in refereed journals
Hassani-Pak, K., Legaie, R., Canevet, C., Van Den Berg, H. A., Moore, J. D. and Rawlings, C. J. 2010. Enhancing data integration with text analysis to find proteins implicated in plant stress response. Journal of Integrative Bioinformatics. 7, p. 121 (13pp). https://doi.org/10.2390/biecoll-jib-2010-121
Host selection of the giant willow aphid (Tuberolachnus salignus)
C1 - Edited contributions to conferences/learned societies
Aradottir, G. I., Karp, A., Hanley, S. J., Shield, I. F., Woodcock, C. M., Dewhirst, S. Y., Collins, M., Leather, S. and Harrington, R. 2009. Host selection of the giant willow aphid (Tuberolachnus salignus). REDIA, XCII, 2009: 223-225.
Graph-based sequence annotation using a data integration approach
A - Papers appearing in refereed journals
Pesch, R., Lysenko, A., Hindle, M. M., Hassani-Pak, K., Thiele, R., Rawlings, C. J., Kohler, J. and Taubert, J. 2008. Graph-based sequence annotation using a data integration approach. Journal of Integrative Bioinformatics. 5(2):94, p. 15pp. https://doi.org/10.2390/biecoll-jib-2008-94
An anchored linkage map for sugar beet based on AFLP, SNP and RAPD markers and QTL mapping of a new source of resistance to Beet necrotic yellow vein virus
A - Papers appearing in refereed journals
Grimmer, M. K., Trybush, S., Hanley, S. J., Francis, S. A., Karp, A. and Asher, M. J. C. 2007. An anchored linkage map for sugar beet based on AFLP, SNP and RAPD markers and QTL mapping of a new source of resistance to Beet necrotic yellow vein virus. Theoretical and Applied Genetics. 114 (7), pp. 1151-1160. https://doi.org/10.1007/s00122-007-0507-3
Alignment of a Salix linkage map to the Populus genomic sequence reveals macrosynteny between willow and poplar genomes
A - Papers appearing in refereed journals
Hanley, S. J., Mallott, M. D. and Karp, A. 2006. Alignment of a Salix linkage map to the Populus genomic sequence reveals macrosynteny between willow and poplar genomes. Tree Genetics & Genomes. 3 (1), pp. 35-48. https://doi.org/10.1007/s11295-006-0049-x
Getting the most out of fluorescent amplified fragment length polymorphism
A - Papers appearing in refereed journals
Trybush, S., Hanley, S. J., Cho, K-H., Jahodova, S., Grimmer, M., Emelianov, I., Bayon, C. and Karp, A. 2006. Getting the most out of fluorescent amplified fragment length polymorphism. Canadian Journal Of Botany. 84 (8), pp. 1347-1354. https://doi.org/10.1139/B06-096
Genetic mapping of important agronomic traits in biomass willow
F - Theses
Hanley, S. J. 2003. Genetic mapping of important agronomic traits in biomass willow. F - Theses
A genetic linkage map of willow (Salix viminalis) based on AFLP and microsatellite markers
A - Papers appearing in refereed journals
Hanley, S. J., Barker, J. H. A., Van Ooijen, J. W., Aldam, C., Harris, S. L., Ahman, I., Larsson, S. and Karp, A. 2002. A genetic linkage map of willow (Salix viminalis) based on AFLP and microsatellite markers. Theoretical and Applied Genetics. 105 (6-7), pp. 1087-1096. https://doi.org/10.1007/s00122-002-0979-0
Isolation and characterization of microsatellites in Echinochloa (L.) Beauv. spp.
A - Papers appearing in refereed journals
Danquah, E. Y., Hanley, S. J., Brookes, R. C., Aldam, C. and Karp, A. 2002. Isolation and characterization of microsatellites in Echinochloa (L.) Beauv. spp. Molecular Ecology Notes. 2 (1), pp. 54-56. https://doi.org/10.1046/j.1471-8286.2002.00144.x
The use of 15N to trace plant uptake of labelled dairy slurry injected into the soil: influence of the new nitrification inhibitor, DMPP
C2 - Non-edited contributions to conferences
Hatch, D. J., Chadwick, D. R., Bol, R. and King, R. 2002. The use of 15N to trace plant uptake of labelled dairy slurry injected into the soil: influence of the new nitrification inhibitor, DMPP. Annual Meeting of the Stable Isotope Mass Spectrometry Users Group, Belfast, UK, 17-18 January 2002.
Nitrous oxide emission after injection of 15N labelled dairy slurry injected into soil
C2 - Non-edited contributions to conferences
Bol, R., Dittert, K., King, R., Chadwick, D. R. and Hatch, D. J. 2001. Nitrous oxide emission after injection of 15N labelled dairy slurry injected into soil. Abstract SIMSUG 2001. Annual Meeting of the Stable Isotope Mass Spectrometry Users' Group, Glasgow, UK, January 2001.
Identification of transposon-tagged genes by the random sequencing of Mutator -tagged DNA fragments from Zea mays
A - Papers appearing in refereed journals
Hanley, S. J., Edwards, D., Stevenson, D., Haines, S., Hegarty, M., Schuch, W. and Edwards, K. J. 2000. Identification of transposon-tagged genes by the random sequencing of Mutator -tagged DNA fragments from Zea mays. The Plant Journal. 23, pp. 557-566.