Theoretical and Applied Genetics

Journal

TitleTheoretical and Applied Genetics
AlternativeTheoretical and Applied Genetics (TAG)
AlternativeTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik
ISSN0040-5752
PublisherSpringer

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A breeding strategy targeting the secondary gene pool of bread wheat: introgression from a synthetic hexaploid wheat

A - Papers appearing in refereed journals
Hao, M., Zhang, L., Zhao, L., Dai, S., Li, A., Yang, W., Xie, D., Li, Q., Ning, S., Yan, Z., Wu, B., Yuan Z., Huang, L., Wang, J., Zheng, K., Chen, W., Chen, X., Chen, M., Wei, Y., Zhang, H., Kishii, M., Hawkesford, M. J., Mao, L., Zheng, Y. and Liu, D. 2019. A breeding strategy targeting the secondary gene pool of bread wheat: introgression from a synthetic hexaploid wheat. Theoretical and Applied Genetics.

Modeling copy number variation in the genomic prediction of maize hybrids

A - Papers appearing in refereed journals
Lyra, D. H., Galli, G., Alves, F. C., Granato, I. S. C., Vidotti, M. S., Sousa, M. B., Morosini, J. S., Crossa, J. and Fritsche-Neto, R. 2019. Modeling copy number variation in the genomic prediction of maize hybrids. Theoretical and Applied Genetics. 132, pp. 273-288.

Sequence diversification in recessive alleles of two host factor genes suggests adaptive selection for bymovirus resistance in cultivated barley from East Asia

A - Papers appearing in refereed journals
Yang, P., Habekuss, A., Hofinger, Bernhard J., Kanyuka, K., Kilian, B., Graner, Andreas, Ordon, Frank and Stein, Nils 2017. Sequence diversification in recessive alleles of two host factor genes suggests adaptive selection for bymovirus resistance in cultivated barley from East Asia. Theoretical and Applied Genetics. 130 (2), pp. 331-344.

Identification of environmentally stable QTL for resistance against Leptosphaeria maculans in oilseed rape (Brassica napus)

A - Papers appearing in refereed journals
Huang, Y. J., Jestin, C., Welham, S. J., King, G. J., Manzanares-Dauleux, M. J., Fitt, B. D. L. and Delourme, R. 2016. Identification of environmentally stable QTL for resistance against Leptosphaeria maculans in oilseed rape (Brassica napus). Theoretical and Applied Genetics. 129 (1), pp. 169-180.

Genetic analyses of BaMMV/BaYMV resistance in barley accession HOR4224 result in the identification of an allele of the translation initiation factor 4e (Hv-eIF4E) exclusively effective against Barley mild mosaic virus (BaMMV)

A - Papers appearing in refereed journals
Perovic, D., Kramer, I., Habekuss, A., Perner, K., Pickering, R., Proeseler, G., Kanyuka, K. and Ordon, F. 2014. Genetic analyses of BaMMV/BaYMV resistance in barley accession HOR4224 result in the identification of an allele of the translation initiation factor 4e (Hv-eIF4E) exclusively effective against Barley mild mosaic virus (BaMMV). Theoretical and Applied Genetics. 127, pp. 1061-1071.

Three-point appraisal of genetic linkage maps

A - Papers appearing in refereed journals
Gilks, W. R., Welham, S. J., Wang, J., Clark, S. J. and King, G. J. 2012. Three-point appraisal of genetic linkage maps. Theoretical and Applied Genetics. 125, pp. 1393-1402.

Assigning Brassica microsatellite markers to the nine C-genome chromosomes using Brassica rapa var. tricularis-B.oleracea var. alboglabra monosomic alien addition lines

A - Papers appearing in refereed journals
Geleta, M., Heneen, W. K., Stoute, A. I., Muttucumaru, N., Scott, R. J., King, G. J., Kurup, S. and Bryngelsson, T. 2012. Assigning Brassica microsatellite markers to the nine C-genome chromosomes using Brassica rapa var. tricularis-B.oleracea var. alboglabra monosomic alien addition lines. Theoretical and Applied Genetics. 125, pp. 455-466.

The identification and mapping of candidate genes and QTL involved in the fatty acid desaturation pathway in Brassica napus

A - Papers appearing in refereed journals
Smooker, A. M., Wells, R., Morgan, C., Beaudoin, F., Cho, K., Fraser, F. and Bancroft, I. 2011. The identification and mapping of candidate genes and QTL involved in the fatty acid desaturation pathway in Brassica napus. Theoretical and Applied Genetics. 122, pp. 1075-1090.

Brassica GLABRA2 genes: analysis of function related to seed oil content and development of functional markers

A - Papers appearing in refereed journals
Chai, G., Bai, Z., Wei, F., King, G. J., Wang, C., Shi, L., Dong, C., Chen, Hong and Liu, S. 2010. Brassica GLABRA2 genes: analysis of function related to seed oil content and development of functional markers. Theoretical and Applied Genetics. 120, pp. 1597-1610.

High-resolution melting analysis of cDNA-derived PCR amplicons for rapid and cost-effective identification of novel alleles in barley

A - Papers appearing in refereed journals
Hofinger, B. J., Jing, H-C., Hammond-Kosack, K. E. and Kanyuka, K. 2009. High-resolution melting analysis of cDNA-derived PCR amplicons for rapid and cost-effective identification of novel alleles in barley. Theoretical and Applied Genetics. 119, pp. 851-865.

cDNA cloning, expression levels and gene mapping of photosynthetic and non-photosynthetic ferredoxin genes in sunflower (Helianthus annuus L.)

A - Papers appearing in refereed journals
Venegas-Caleron, M., Zambelli, A., Ruiz-Lopez, N., Youssar, L., Leon, A., Garces, R. and Martinez-Force, E. 2009. cDNA cloning, expression levels and gene mapping of photosynthetic and non-photosynthetic ferredoxin genes in sunflower (Helianthus annuus L.). Theoretical and Applied Genetics. 118, pp. 891-901.

The analysis of QTL by simultaneous use of the full linkage map

A - Papers appearing in refereed journals
Verbyla, A. P., Cullis, B. R. and Thompson, R. 2008. The analysis of QTL by simultaneous use of the full linkage map. Theoretical and Applied Genetics. 116 (December), pp. 95-111.

The reference genetic linkage map for the multinational Brassica rapa genome sequencing project

A - Papers appearing in refereed journals
Choi, S. R., Teakle, G. R., Plaha, P., Kim, J. H., Allender, C. J., Beynon, E., Piao, Z. Y., Soengas, P., Ham, T. H., King, G. J., Barker, G. C., Hand, P., Lydiate, D. J., Batley, J., Edwards, D., Koo, D. H., Bang, J. W., Park, B-S. and Lim, Y. P. 2007. The reference genetic linkage map for the multinational Brassica rapa genome sequencing project. Theoretical and Applied Genetics. 115, pp. 777-792.

D hordeins of Hordeum chilense : a novel source of variation for improvement of wheat

A - Papers appearing in refereed journals
Piston, F., Shewry, P. R. and Barro, F. 2007. D hordeins of Hordeum chilense : a novel source of variation for improvement of wheat. Theoretical and Applied Genetics. 115, pp. 77-86.

Mapping of five resistance genes to sugar-beet powdery mildew using AFLP and anchored SNP markers

A - Papers appearing in refereed journals
Grimmer, M. K., Bean, K. M. R. and Asher, M. J. C. 2007. Mapping of five resistance genes to sugar-beet powdery mildew using AFLP and anchored SNP markers. Theoretical and Applied Genetics. 115, pp. 67-75.

An anchored linkage map for sugar beet based on AFLP, SNP and RAPD markers and QTL mapping of a new source of resistance to Beet necrotic yellow vein virus

A - Papers appearing in refereed journals
Grimmer, M. K., Trybush, S., Hanley, S. J., Francis, S. A., Karp, A. and Asher, M. J. C. 2007. An anchored linkage map for sugar beet based on AFLP, SNP and RAPD markers and QTL mapping of a new source of resistance to Beet necrotic yellow vein virus. Theoretical and Applied Genetics. 114 (7), pp. 1151-1160.

Detection and resolution of loci affecting circadian period in Brassica oleracea

A - Papers appearing in refereed journals
Salathia, N., Lynn, J. R., Millar, A. J. and King, G. J. 2007. Detection and resolution of loci affecting circadian period in Brassica oleracea. Theoretical and Applied Genetics. 114, pp. 683-692.

The genetics of nitrogen use in hexaploid wheat: N utilisation, development and yield

A - Papers appearing in refereed journals
Habash, D. Z., Bernard, S., Schondelmaier, J., Weyen, J. and Quarrie, S. A. 2007. The genetics of nitrogen use in hexaploid wheat: N utilisation, development and yield. Theoretical and Applied Genetics. 114, pp. 403-419.

Simple sequence repeats reveal uneven distribution of genetic diversity in chloroplast genomes of Brassica oleracea L. and (n=9) wild relatives

A - Papers appearing in refereed journals
Allender, C. J., Allainguillaume, J., Lynn, J. and King, G. J. 2007. Simple sequence repeats reveal uneven distribution of genetic diversity in chloroplast genomes of Brassica oleracea L. and (n=9) wild relatives. Theoretical and Applied Genetics. 114, pp. 609-618.

Comparative field performance over 3 years and two sites of transgenic wheat lines expressing HMW subunit transgenes

A - Papers appearing in refereed journals
Shewry, P. R., Powers, S. J., Field, J. M., Fido, R. J., Jones, H. D., Arnold, G. M., West, J., Lazzeri, P. A., Barcelo, P., Barro, F., Tatham, A. S., Bekes, F., Butow, B. and Darlington, H. 2006. Comparative field performance over 3 years and two sites of transgenic wheat lines expressing HMW subunit transgenes. Theoretical and Applied Genetics. 113, pp. 128-136.

Novel puroindoline and grain softness protein alleles in Aegilops species with the C, D, S, M and U genomes

A - Papers appearing in refereed journals
Chen, M., Wilkinson, M. D., Tosi, P., He, G. and Shewry, P. R. 2005. Novel puroindoline and grain softness protein alleles in Aegilops species with the C, D, S, M and U genomes. Theoretical and Applied Genetics. 111, pp. 1159-1166.

Comparative analysis of the D genome-encoded high-molecular weight sububits of glutenin

A - Papers appearing in refereed journals
Wan, Y., Yan, Z., Liu, K., Zheng, Y., D'ovidio, R., Shewry, P. R., Halford, N. G. and Wang, D. 2005. Comparative analysis of the D genome-encoded high-molecular weight sububits of glutenin. Theoretical and Applied Genetics. 111, pp. 1183-1190.

A high-density genetic map of hexaploid wheat (Triticum aestivum L.) from the cross Chinese Spring x SQ1 and its use to compare QTLs for grain yield across a range of environments

A - Papers appearing in refereed journals
Quarrie, S. A., Steed, A., Calestani, C., Semikhodskii, A., Lebreton, C., Chinoy, C., Steele, N., Pljevljakusic, D., Waterman, E., Weyen, J., Schondelmaier, J., Habash, D. Z., Farmer, P., Saker, L., Clarkson, D. T., Abugalieva, A., Yessimbekova, M., Turuspekov, Y., Abugalieva, S., Tuberosa, R., Sanguineti, M-C., Hollington, P. A., Aragues, R., Royo, A. and Dodig, D. 2005. A high-density genetic map of hexaploid wheat (Triticum aestivum L.) from the cross Chinese Spring x SQ1 and its use to compare QTLs for grain yield across a range of environments. Theoretical and Applied Genetics. 110, pp. 865-880.

Isolation of gibberellin metabolic pathway genes from barley and comparative mapping in barley, wheat and rice

A - Papers appearing in refereed journals
Spielmeyer, W., Ellis, M., Robertson, M., Ali, S., Lenton, J. R. and Chandler, P. M. 2004. Isolation of gibberellin metabolic pathway genes from barley and comparative mapping in barley, wheat and rice. Theoretical and Applied Genetics. 109, pp. 847-855.

Expression of epitope-tagged LMW glutenin subunits in the starchy endosperm of transgenic wheat and their incorporation into glutenin polymers

A - Papers appearing in refereed journals
Tosi, P., D'ovidio, R., Napier, J. A., Bekes, F. and Shewry, P. R. 2004. Expression of epitope-tagged LMW glutenin subunits in the starchy endosperm of transgenic wheat and their incorporation into glutenin polymers. Theoretical and Applied Genetics. 108, pp. 468-476.

Expression of the gamma-zein protein of maize in seeds of transgenic barley: effects on grain composition and properties

A - Papers appearing in refereed journals
Zhang, Y., Darlington, H., Jones, H. D., Halford, N. G., Napier, J. A., Davey, M. R., Lazzeri, P. A. and Shewry, P. R. 2003. Expression of the gamma-zein protein of maize in seeds of transgenic barley: effects on grain composition and properties. Theoretical and Applied Genetics. 106 (6), pp. 1139-1146.

The development of multiplex simple sequence repeat (SSR) markers to complement distinctness, uniformity and stability testing of rape (Brassica napus L.) varieties

A - Papers appearing in refereed journals
Tommasini, L., Batley, J., Arnold, G. M., Cooke, R. J., Donini, P., Lee, D., Law, J. R., Lowe, C., Moule, C., Trick, M. and Edwards, K. J. 2003. The development of multiplex simple sequence repeat (SSR) markers to complement distinctness, uniformity and stability testing of rape (Brassica napus L.) varieties. Theoretical and Applied Genetics. 106, pp. 1091-1101.

Sequence and properties of HMW subunit 1Bx20 from pasta wheat (Triticum durum ) which is associated with poor end use properties

A - Papers appearing in refereed journals
Shewry, P. R., Gilbert, S. M., Savage, A. W. J., Tatham, A. S., Wan, Y., Belton, P. S., Wellner, N., D'ovidio, R., Bekes, F. and Halford, N. G. 2003. Sequence and properties of HMW subunit 1Bx20 from pasta wheat (Triticum durum ) which is associated with poor end use properties. Theoretical and Applied Genetics. 106, pp. 744-750.

Molecular linkage maps of Vitis vinifera and Vitis riparia Mchx

A - Papers appearing in refereed journals
Grando, M. S., Bellin, D., Edwards, K. J., Pozzi, C., Stefanini, M. and Velasco, R. 2003. Molecular linkage maps of Vitis vinifera and Vitis riparia Mchx. Theoretical and Applied Genetics. 106, pp. 1213-1224.

A genetic linkage map of willow (Salix viminalis) based on AFLP and microsatellite markers

A - Papers appearing in refereed journals
Hanley, S. J., Barker, J. H. A., Van Ooijen, J. W., Aldam, C., Harris, S. L., Ahman, I., Larsson, S. and Karp, A. 2002. A genetic linkage map of willow (Salix viminalis) based on AFLP and microsatellite markers. Theoretical and Applied Genetics. 105 (6-7), pp. 1087-1096.

Studies of the transferability of microsatellites derived from Triticum tauschii to hexaploid wheat and to diploid related species using amplification, hybridization and sequence comparisons

A - Papers appearing in refereed journals
Guyomarc'h, H., Sourdille, P., Edwards, K. J. and Bernard, M. 2002. Studies of the transferability of microsatellites derived from Triticum tauschii to hexaploid wheat and to diploid related species using amplification, hybridization and sequence comparisons. Theoretical and Applied Genetics. 105, pp. 736-744.

Characterisation of polymorphic microsatellite markers from Aegilops tauschii and transferability to the D-genome of bread wheat

A - Papers appearing in refereed journals
Guyomarc'h, H., Sourdille, P., Charmet, G., Edwards, K. J. and Bernard, M. 2002. Characterisation of polymorphic microsatellite markers from Aegilops tauschii and transferability to the D-genome of bread wheat. Theoretical and Applied Genetics. 104, pp. 1164-1172.

A high degree of genetic diversity is revealed in Isatis spp. (dyer's woad) by amplified fragment length polymorphism (AFLP)

A - Papers appearing in refereed journals
Gilbert, K. G., Garton, S., Karam, M. A., Arnold, G. M., Karp, A., Edwards, K. J., Cooke, D. T. and Barker, J. H. A. 2002. A high degree of genetic diversity is revealed in Isatis spp. (dyer's woad) by amplified fragment length polymorphism (AFLP). Theoretical and Applied Genetics. 104 (6-7), pp. 1150-1156.

Isolation and characterization of five novel high molecular weight subunit of glutenin genes from Triticum timopheevi and Aegilops cylindrica

A - Papers appearing in refereed journals
Wan, Y., Wang, D., Shewry, P. R. and Halford, N. G. 2002. Isolation and characterization of five novel high molecular weight subunit of glutenin genes from Triticum timopheevi and Aegilops cylindrica. Theoretical and Applied Genetics. 104, pp. 828-839.

Insertional tagging of regulatory sequences in tritordeum; a hexaploid cereal species

A - Papers appearing in refereed journals
Salgueiro, S., Matthes, M. C., Gil, J., Steele, S. H., Savazzini, F., Riley, A. E., Jones, H. D., Lazzeri, P. A. and Barcelo, P. 2002. Insertional tagging of regulatory sequences in tritordeum; a hexaploid cereal species. Theoretical and Applied Genetics. 104, pp. 916-925.

Genetic mapping of grapevine (Vitis vinifera L.) applied to the detection of QTLs for seedlessness and berry weight

A - Papers appearing in refereed journals
Doligez, A., Bouquet, A., Danglot, Y., Lahogue, F., Riaz, S., Meredith, C. P., Edwards, K. J. and This, P. 2002. Genetic mapping of grapevine (Vitis vinifera L.) applied to the detection of QTLs for seedlessness and berry weight. Theoretical and Applied Genetics. 105, pp. 780-795.

Field evaluation and agronomic performance of transgenic wheat

A - Papers appearing in refereed journals
Barro, F., Barcelo, P., Lazzeri, P. A., Shewry, P. R., Martin, A. and Ballesteros, J. 2002. Field evaluation and agronomic performance of transgenic wheat. Theoretical and Applied Genetics. 105 (6), pp. 980-984.

A maize bacterial artificial chromosome (BAC) library from the European flint inbred line F2

A - Papers appearing in refereed journals
O'sullivan, D. M., Ripoll, P. J., Rodgers, M. and Edwards, K. J. 2001. A maize bacterial artificial chromosome (BAC) library from the European flint inbred line F2. Theoretical and Applied Genetics. 103, pp. 425-432.

Simple sequence repeat (SSR) markers survey of the cassava (Manihot esculenta Crantz) genome: towards an SSR-based molecular genetic map of cassava

A - Papers appearing in refereed journals
Mba, R. E. C., Stephenson, P., Edwards, K. J., Melzer, S., Nkumbira, J., Gullberg, U., Apel, K., Gale, M., Tohme, J. and Fregene, M. 2001. Simple sequence repeat (SSR) markers survey of the cassava (Manihot esculenta Crantz) genome: towards an SSR-based molecular genetic map of cassava. Theoretical and Applied Genetics. 102, pp. 21-31.

Variation in oil palm (Elaeis guineensis Jacq.) tissue culture-derived regenerants revealed by AFLPs with methylation-sensitive enzymes

A - Papers appearing in refereed journals
Matthes, M. C., Singh, R., Cheah, S. C. and Karp, A. 2001. Variation in oil palm (Elaeis guineensis Jacq.) tissue culture-derived regenerants revealed by AFLPs with methylation-sensitive enzymes. Theoretical and Applied Genetics. 102 (6-7), pp. 971-979.