Sustainable Agriculture Sciences Harpenden

TitleSustainable Agriculture Sciences Harpenden
TypeScience Department
InstituteRothamsted Research
HeadSteve McGrath
Executive AssistantSally Murdoch

Outputs

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Geostatistics : Modelling spatial variation

B - Book chapters etc edited externally
Webster, R. 2021. Geostatistics : Modelling spatial variation. in: Encyclopedia of Soils in the Environment Elsevier.

The short-lived inhibitory effect of Brachiaria humidicola on nitrous oxide emissions following sheep urine application in a highly nitrifying soil

A - Papers appearing in refereed journals
Ma, Y., Charteris, A. F., Loick, N., Cardenas, L. M., Zhipeng, S., Lopez, M., Chen, Q., Jones, D. L. and Chadwick, D. R. 2021. The short-lived inhibitory effect of Brachiaria humidicola on nitrous oxide emissions following sheep urine application in a highly nitrifying soil. Journal of Plant Nutrition and Soil Science. 184 (6), pp. 723-732. https://doi.org/10.1002/jpln.202000501

Land management legacy affects abundance and function of the acdS gene in wheat root associated pseudomonads

A - Papers appearing in refereed journals
Ruscoe, H., Taketani, R., Clark, I. M., Lund, G., Hughes, D. J., Dodd, I., Hirsch, P. R. and Mauchline, T. H. 2021. Land management legacy affects abundance and function of the acdS gene in wheat root associated pseudomonads. Frontiers in Microbiology. 12, p. 611339. https://doi.org/10.3389/fmicb.2021.611339

Quantifying the frequency and volume of urine deposition by grazing sheep using tri-axial accelerometers

A - Papers appearing in refereed journals
Marsden, K. A., Lush, L., Holmberg, J. A., Harris, I. M., Whelan, M. J., Webb, S., King, A. J., Wilson, R. P., Jones, D. L., Charteris, A. F., Cardenas, L. M. and Chadwick, D. R. 2021. Quantifying the frequency and volume of urine deposition by grazing sheep using tri-axial accelerometers. Animal. 15 (6), p. 100234. https://doi.org/10.1016/j.animal.2021.100234

Changes in agricultural climate in South-Eastern England from 1892 to 2016 and differences in cereal and permanent grassland yield

A - Papers appearing in refereed journals
Addy, J., Ellis, R. H., Macdonald, A. J., Semenov, M. A. and Mead, A. 2021. Changes in agricultural climate in South-Eastern England from 1892 to 2016 and differences in cereal and permanent grassland yield. Agricultural and Forest Meteorology. 308-309, p. 108560. https://doi.org/10.1016/j.agrformet.2021.108560

Continental-scale controls on soil organic carbon across sub-Saharan Africa

A - Papers appearing in refereed journals
Von Fromm, S. F., Hoyt, A. M, Lange, M., Acquah, G., Aynekulu, E., Berhe, A. A, Haefele, S. M., McGrath, S. P., Shepherd, K. D., Sila, A. M., Six, J., Towett, E. K, Trumbore, S. E., Vagen, T.-G, Weullow, E., Winowiecki, L. A. and Doetterl, S. 2021. Continental-scale controls on soil organic carbon across sub-Saharan Africa. Soil. 7, pp. 305-332. https://doi.org/10.5194/soil-7-305-2021

Metagenomic approaches reveal differences in genetic diversity and relative abundance of nitrifying bacteria and archaea in contrasting soils

A - Papers appearing in refereed journals
Clark, I. M., Hughes, D. J., Fu, Q., Abadie, M. and Hirsch, P. R. 2021. Metagenomic approaches reveal differences in genetic diversity and relative abundance of nitrifying bacteria and archaea in contrasting soils . Scientific Reports. 11, p. 15905. https://doi.org/10.1038/s41598-021-95100-9

Simulating cropping sequences using earth observation data

A - Papers appearing in refereed journals
Sharp, R. T., Henrys, P. A., Jarvis, S. G., Whitmore, A. P., Milne, A. E., Coleman, K., Mohankumar, S. E. P. and Metcalfe, H. 2021. Simulating cropping sequences using earth observation data. Computers and Electronics in Agriculture. 188, p. 106330. https://doi.org/10.1016/j.compag.2021.106330

Forecasting future crop suitability with microclimate data

A - Papers appearing in refereed journals
Gardner, A. S., Maclean, I. M. D., Gaston, K. J. and Bütikofer, L. 2021. Forecasting future crop suitability with microclimate data. Agricultural Systems. 190, p. 103084. https://doi.org/10.1016/j.agsy.2021.103084

Enterotype-like microbiome stratification as emergent structure in complex adaptive systems: A mathematical model

A - Papers appearing in refereed journals
Martin, M. A., Crawford, J. W., Neal, A. L. and Garcia-Gutierrez-Baez, C. 2021. Enterotype-like microbiome stratification as emergent structure in complex adaptive systems: A mathematical model. Fractals: Complex Geometry, Patterns, and Scaling in Nature and Society. https://doi.org/10.1142/S0218348X21502108

The grain mineral composition of barley, oat and wheat on soils with pH and soil phosphorus gradients

A - Papers appearing in refereed journals
Jordan-Meille, L., Holland, J. E., McGrath, S. P., Glendining, M. J., Thomas, C. L. and Haefele, S. M. 2021. The grain mineral composition of barley, oat and wheat on soils with pH and soil phosphorus gradients. European Journal of Agronomy. 126, p. 126281. https://doi.org/10.1016/j.eja.2021.126281

Substrate control of sulphur utilisation and microbial stoichiometry in soil: Results of C-13, N-15, C-14, and S-35 quad labelling

A - Papers appearing in refereed journals
Ma, Q., Kuzyakov, Y., Pan, W., Tang, S., Chadwick, D. R., Wen, Y., Hill, P. W., Macdonald, A. J., Ge, T., Si, L., Wu, L. and Jones, D. L. 2021. Substrate control of sulphur utilisation and microbial stoichiometry in soil: Results of C-13, N-15, C-14, and S-35 quad labelling. The ISME Journal. https://doi.org/10.1038/s41396-021-00999-7

African soil properties and nutrients mapped at 30 m spatial resolution using two-scale ensemble machine learning

A - Papers appearing in refereed journals
Hengl, T., Miller, M. A. E., Krizan, J., Shepherd, K. D., Sila, A., Kilibarda, M., Antonijevic, O., Glusica, L., Dobermann, A., Haefele, S. M., McGrath, S. P., Acquah, G., Collinson, J., Parente, L., Sheykmousa, M., Saito, K., Johnson, J-M., Chamberlain, J., Silatsa, F. B. T., Yemefack, M., Wendt, J., MacMillan, R. A., Wheeler, I. and Crouch, J. 2021. African soil properties and nutrients mapped at 30 m spatial resolution using two-scale ensemble machine learning. Scientific Reports. 11, p. 6130. https://doi.org/10.1038/s41598-021-85639-y

Relative contributions of bacteria and fungi to nitrous oxide emissions following nitrate application in soils representing different land uses

A - Papers appearing in refereed journals
Castellano-Hinojosa, A., Le Cocq, K., Charteris, A., Abadie, M., Chadwick, D. R., Clark, I. M., Bedmar, E. J. and Cardenas, L. M. 2021. Relative contributions of bacteria and fungi to nitrous oxide emissions following nitrate application in soils representing different land uses. International Biodeterioration & Biodegradation. 159, p. 105199. https://doi.org/10.1016/j.ibiod.2021.105199

Optimising storage conditions and processing of sheep urine for nitrogen cycle and gaseous emission measurements from urine patches

A - Papers appearing in refereed journals
Charteris, A., Marsden, K. A., Evans, J., Barrat, H., Loick, N., Jones, D. L., Chadwick, D. R. and Cardenas, L. M. 2021. Optimising storage conditions and processing of sheep urine for nitrogen cycle and gaseous emission measurements from urine patches. Scientific Reports. 11, p. 12116. https://doi.org/10.1038/s41598-021-91498-4

Outputs: Potassium Losses from Agricultural Systems

B - Book chapters etc edited externally
Goulding, K. W. T., Murrell, S. T., Mikkelsen, R. L., Rosolem, C., Johnston, A. E., Wang, H. and Alfaro, M. A. 2021. Outputs: Potassium Losses from Agricultural Systems. in: Murrell, S. T., Mikkelsen, R. L., Sulewski, G., Norton, R. and Thompson, M. L. (ed.) Improving Potassium Recommendations for Agricultural Crops Cham, Switzerland Springer. pp. 75-97

Evolution of secondary inorganic aerosols amidst improving PM2.5 air quality in the North China plain

A - Papers appearing in refereed journals
Zhang, Y., Liu, X, Tang, A., Goulding, K. W. T. and Collett, J. L. 2021. Evolution of secondary inorganic aerosols amidst improving PM2.5 air quality in the North China plain. Environmental Pollution. 281, p. 117027. https://doi.org/10.1016/j.envpol.2021.117027

Liming impacts barley yield over a wide concentration range of soil exchangeable cations

A - Papers appearing in refereed journals
Holland, J. E., White, P .J., Thauvin, J. N., Jordan-Meille, L., Haefele, S. M., Thomas, C. L., Goulding, K. W. T. and McGrath, S. P. 2021. Liming impacts barley yield over a wide concentration range of soil exchangeable cations. Nutrient Cycling in Agroecosystems. 120, pp. 131-144. https://doi.org/10.1007/s10705-020-10117-2

Within-field spatial variability of greenhouse gas fluxes from an extensive and intensive sheep-grazed pasture

A - Papers appearing in refereed journals
Charteris, A. F., Harris, P., Marsden, K. A., Harris, I. M., Guo, Z., Beaumont, D. A., Taylor, H., Sanfratello, G., Jones, D. L., Johnson, S. C. M., Whelan, M. J., Howden, N., Sint, H. M., Chadwick, D. R. and Cardenas, L. M. 2021. Within-field spatial variability of greenhouse gas fluxes from an extensive and intensive sheep-grazed pasture. Agriculture, Ecosystems & Environment. 312, p. 107355. https://doi.org/10.1016/j.agee.2021.107355

Agricultural intensification and climate change have increased the threat from weeds

A - Papers appearing in refereed journals
Storkey, J., Mead, A., Addy, J. and Macdonald, A. J. 2021. Agricultural intensification and climate change have increased the threat from weeds. Global Change Biology. 118 (2), p. e2002548117. https://doi.org/10.1111/gcb.15585

Inorganic Chemical Fertilizer Application to Wheat Reduces the Abundance of Putative Plant Growth-Promoting Rhizobacteria

A - Papers appearing in refereed journals
Reid, T. E., Kavamura, V. N., Abadie, M., Torres-Ballesteros, A., Pawlett, M., Clark, I. M., Harris, J. and Mauchline, T. H. 2021. Inorganic Chemical Fertilizer Application to Wheat Reduces the Abundance of Putative Plant Growth-Promoting Rhizobacteria. Frontiers in Microbiology. 12 (article), p. 642587. https://doi.org/10.3389/fmicb.2021.642587

Effects of Fertilizers and Manures on Temporal Yield Variability of Winter Rye

A - Papers appearing in refereed journals
Studnicki, M., Macholdt, J., Macdonald, A. J. and Stepien, W. 2021. Effects of Fertilizers and Manures on Temporal Yield Variability of Winter Rye. Agronomy. 11 (3), p. 519. https://doi.org/10.3390/agronomy11030519

Estimating maximum fine-fraction organic carbon in UK grasslands

A - Papers appearing in refereed journals
Paterson, K. C., Cloy, J. M., Rees, R. M., Baggs, E. M., Martinea, H., Fornara, D., Macdonald, A. J. and Buckingham, S. 2021. Estimating maximum fine-fraction organic carbon in UK grasslands. Biogeosciences. 18, pp. 605-620. https://doi.org/10.5194/bg-18-605-2021

Stomatal conductance limited the CO2 response of grassland in the last century

A - Papers appearing in refereed journals
Cabrera, J. C. B., Hirl, R. T., Schaufele, R., Macdonald, A. J. and Schnyder, H. 2021. Stomatal conductance limited the CO2 response of grassland in the last century. BMC Biology. 19 (article), p. 50. https://doi.org/10.1186/s12915-021-00988-4

The effect of organic carbon content on soil compression characteristics

A - Papers appearing in refereed journals
Suravi, K., Attenborough, K., Taherzadeh, S., Macdonald, A. J., Powlson, D. S., Ashton, R. W., Suravi, K. N. and Whalley, W. R. 2021. The effect of organic carbon content on soil compression characteristics. Soil & Tillage Research. 209 (May), p. 104975. https://doi.org/10.1016/j.still.2021.104975

Relationship between soil carbon sequestration and the ability of soil aggregates to transport dissolved oxygen

A - Papers appearing in refereed journals
Zhang, X., Gregory, A. S., Whalley, W. R., Coleman, K., Neal, A. L., Bacq-Labreuil, A., Mooney, S. J., Crawford, J. W., Soga, K. and Illangasekare, T. H. 2021. Relationship between soil carbon sequestration and the ability of soil aggregates to transport dissolved oxygen. Geoderma. 403, p. 115370. https://doi.org/10.1016/j.geoderma.2021.115370

The potential for soybean to diversify the production of plant-based protein in the UK

A - Papers appearing in refereed journals
Coleman, K., Whitmore, A. P., Hassall, K. L., Shield, I. F., Semenov, M. A., Dobermann, A., Bourhis, Y., Eskandary, A. and Milne, A. E. 2021. The potential for soybean to diversify the production of plant-based protein in the UK. Science of the Total Environment. 767, p. 144903. https://doi.org/10.1016/j.scitotenv.2020.144903

Stability of farm income: The role of agricultural diversity and agri-environment scheme payments

A - Papers appearing in refereed journals
Harkness, C., Areal, F. J., Semenov, M. A., Senapati, N., Shield, I. F. and Bishop, J. 2021. Stability of farm income: The role of agricultural diversity and agri-environment scheme payments. Agricultural Systems. 187, p. 103009. https://doi.org/10.1016/j.agsy.2020.103009

The impact of weather and increased atmospheric CO2 from 1892 to 2016 on simulated yields of UK wheat

A - Papers appearing in refereed journals
Addy, J. W. G., Ellis, R.H., Macdonald, A. J., Semenov, M. A. and Mead, A. 2021. The impact of weather and increased atmospheric CO2 from 1892 to 2016 on simulated yields of UK wheat. Journal of the Royal Society Interface. 18 (179), p. 20210250. https://doi.org/10.1098/rsif.2021.0250

Wheat growth responses to soil mechanical impedance are dependent on phosphorus supply

A - Papers appearing in refereed journals
Wang, X., Shen, J., Hedden, P., Phillips, A. L., Thomas, S. G., Ge, Y., Ashton, R. W. and Whalley, W. R. 2021. Wheat growth responses to soil mechanical impedance are dependent on phosphorus supply. Soil & Tillage Research. 205, p. 104754. https://doi.org/10.1016/j.still.2020.104754

Predicting the growth of lettuce from soil infrared reflectance spectra: the potential for crop management

A - Papers appearing in refereed journals
Breure, T. S., Milne, A. E., Webster, R., Haefele, S. M., Hannam, J. A., Moreno-Rojas, S. and Corstanje, R. 2021. Predicting the growth of lettuce from soil infrared reflectance spectra: the potential for crop management. Precision Agriculture. 22, p. 226–248. https://doi.org/10.1007/s11119-020-09739-x

The effects of long-term fertilizations on soil hydraulic properties vary with scales

A - Papers appearing in refereed journals
Zhang, X., Neal, A. L., Crawford, J. W., Bacq-Labreuil, A., Akkari, E. and Rickard, W. 2021. The effects of long-term fertilizations on soil hydraulic properties vary with scales. Journal of Hydrology. 539, p. 125890. https://doi.org/10.1016/j.jhydrol.2020.125890

Beehives, Booze and Suffragettes: The “Sad Case” of Ellen S. Tupper (1822–1888), the “Bee Woman” and “Iowa Queen Bee”

A - Papers appearing in refereed journals
Mielewczik, M., Jowett, K. and Moll, J. 2020. Beehives, Booze and Suffragettes: The “Sad Case” of Ellen S. Tupper (1822–1888), the “Bee Woman” and “Iowa Queen Bee”. Entomologie heute. 31. https://doi.org/10.13140/RG.2.2.34657.04962

The Multi-Fungicide Resistance Status of Aspergillus fumigatus Populations in Arable Soils and the Wider European Environment

A - Papers appearing in refereed journals
Fraaije, B. A., Atkins, S. L., Hanley, S. J., Macdonald, A. J. and Lucas, J. 2020. The Multi-Fungicide Resistance Status of Aspergillus fumigatus Populations in Arable Soils and the Wider European Environment. Frontiers in Microbiology. 11, p. 599233. https://doi.org/10.3389/fmicb.2020.599233

The problem of scale in predicting biological responses to climate

A - Papers appearing in refereed journals
Bütikofer, L., Anderson, K., Bebber, D. P., Bennie, J. J., Early, R. I. and Maclean, I. M. D. 2020. The problem of scale in predicting biological responses to climate. Global Change Biology. 26 (12), pp. 6657-6666. https://doi.org/10.1111/gcb.15358

Novel integrated agricultural land management approach provides sustainable biomass feedstocks for bioplastics and supports the UK’s ‘net-zero’ target.

A - Papers appearing in refereed journals
Ni, Y., Richter, G. M., Mwabonje, O. N., Qi, A., Patel, M. K. and Woods, J. 2020. Novel integrated agricultural land management approach provides sustainable biomass feedstocks for bioplastics and supports the UK’s ‘net-zero’ target. Environmental Research Letters. 16 (1), p. 014023. https://doi.org/10.1088/1748-9326/abcf79

Time-lapse geophysical assessment of agricultural practices on soil moisture dynamics

A - Papers appearing in refereed journals
Blanchy, G., Watts, C. W., Richards, J., Bussell, J., Huntenburg, K., Sparkes, D. L., Stalham, M., Hawkesford, M. J., Whalley, W. R. and Binley, A. 2020. Time-lapse geophysical assessment of agricultural practices on soil moisture dynamics. Vadose Zone Journal. 19 (1), p. e20080. https://doi.org/10.1002/vzj2.20080

Accounting for heterogeneity in the 𝛉–𝛔 relationship: Application to wheat phenotyping using EMI

A - Papers appearing in refereed journals
Blanchy, G., Watts, C. W., Ashton, R. W., Webster, C. P., Hawkesford, M. J., Whalley, W. R. and Binley, A. 2020. Accounting for heterogeneity in the 𝛉–𝛔 relationship: Application to wheat phenotyping using EMI. Vadose Zone Journal. 19 (1), p. e20037. https://doi.org/10.1002/vzj2.20037

Comprehensive nutrient analysis in agricultural organic amendments through non-destructive assays using machine learning

A - Papers appearing in refereed journals
Towett, E. K., Drake, L. B., Acquah, G., Haefele, S. M., McGrath, S. P. and Shepherd, K. D. 2020. Comprehensive nutrient analysis in agricultural organic amendments through non-destructive assays using machine learning. PLOS ONE. 15 (12), p. e0242821. https://doi.org/10.1371/journal.pone.0242821

Sustainable Cropping Requires Adaptation to a Heterogeneous Rhizosphere

A - Papers appearing in refereed journals
Wang, X., Whalley, W. R., Miller, A. J., White, P. J., Zhang, F. and Shen, J. 2020. Sustainable Cropping Requires Adaptation to a Heterogeneous Rhizosphere. Trends in Plant Science. 25 (12), pp. 1194-1202. https://doi.org/10.1016/j.tplants.2020.07.006

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