Rothamsted Research

TitleRothamsted Research
TypeInstitute

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Colletotrichum species associated with durian (Durio zibethinus Murray) in Hainan, China

A - Papers appearing in refereed journals
Xu, H., Zhang, Z., Zhou, Z., West, J. S., Wang, J. and Cao, X. 2025. Colletotrichum species associated with durian (Durio zibethinus Murray) in Hainan, China. Crop Protection. 188 (February), p. 107034. https://doi.org/10.1016/j.cropro.2024.107034

Prioritizing conservation sites for multi-pond systems to maintain protection of water quality in a fragmented agricultural catchment

A - Papers appearing in refereed journals
Zhang, H., Bao, Y., He, X., Lv, J., Tang, Q., Qin, X. and Collins, A. L. 2025. Prioritizing conservation sites for multi-pond systems to maintain protection of water quality in a fragmented agricultural catchment. Water Research. 268 (B), p. 122763. https://doi.org/10.1016/j.watres.2024.122763

Developmental constraint underlies the replicated evolution of grass awns

A - Papers appearing in refereed journals
Patterson, E. L., Macgregor, D., Heeney, M., Gallagher, J. P., Nuesslein, B., Cartwright, A. and Bartlett, M. 2025. Developmental constraint underlies the replicated evolution of grass awns. New Phytologist. 245 (2), pp. 835-848. https://doi.org/10.1111/nph.20268

Genetic variation in leaf photosynthesis and associated traits in elite and landrace-derived genotypes in wheat

A - Papers appearing in refereed journals
Kareem, S. H. S., De Silva, J., Weerasinghe, M., Hawkesford, M. J., Griffiths, S., Howell, P. and Foulkes, M. J. 2024. Genetic variation in leaf photosynthesis and associated traits in elite and landrace-derived genotypes in wheat. The Journal of Agricultural Science. pp. 1-11. https://doi.org/10.1017/S002185962400056X

Seasonal dynamics of forage nutrition in smallholder goat production systems in Malawi

A - Papers appearing in refereed journals
Cooke, A., Mvula, W., Nalivata, P., Ventura-Cordero, J., Gwiriri, L. C., Takahashi, T., Morgan, E. R., Lee, M. R. and Safalaoh, A. 2024. Seasonal dynamics of forage nutrition in smallholder goat production systems in Malawi. African Journal of Range & Forage Science. https://doi.org/10.2989/10220119.2024.2428295

A Moroccan soil spectral library use framework for improving soil property prediction: Evaluating a geostatistical approach

A - Papers appearing in refereed journals
Gashaw-Asrat, T., Breure, T., Sakrabani, R., Corstanje, R., Hassall, K. L., Hamma, A., Kebede, F. and Haefele, S. M. 2024. A Moroccan soil spectral library use framework for improving soil property prediction: Evaluating a geostatistical approach. Geoderma. 452 (December), p. 117116. https://doi.org/10.1016/j.geoderma.2024.117116

Can grain P concentration be used as an indicator of fertilizer requirements in winter wheat?

A - Papers appearing in refereed journals
Haefele, S. M., Gregory, A. S., Poulton, P. R., Hernandez, J. M. B., White, R. P. and McGrath, S. P. 2024. Can grain P concentration be used as an indicator of fertilizer requirements in winter wheat? Field Crops Research. 322 (1 March), p. 109691. https://doi.org/10.1016/j.fcr.2024.109691

The effect of nitrogen input on methane uptake in a wet and a dry year from a temperate desert steppe

A - Papers appearing in refereed journals
Yue, P., Li, K., Hu, Y., Qiao, J., Song, Z., Wang, S., Misselbrook, T. H. and Zuo, X. 2024. The effect of nitrogen input on methane uptake in a wet and a dry year from a temperate desert steppe. Agricultural and Forest Meteorology. 261 (15 Feb), p. 110327. https://doi.org/10.1016/j.agrformet.2024.110327

Long-term effects of lime and phosphorus application on soil extractable (Olsen) phosphorus differ between two arable UK soils

A - Papers appearing in refereed journals
White, R. P., Haefele, S. M., Goulding, K. W. T., McGrath, S. P. and Glendining, M. J. 2024. Long-term effects of lime and phosphorus application on soil extractable (Olsen) phosphorus differ between two arable UK soils. Soil Use and Management. 40 (4), p. e13160. https://doi.org/10.1111/sum.13160

Loss of trace elements from agricultural soil

A - Papers appearing in refereed journals
Comber, S. D. W, Schindler, R. J., Blackwell, M. S. A. and Darch, T. 2024. Loss of trace elements from agricultural soil. Environmental Technology. https://doi.org/10.1080/09593330.2024.2423907

Enhancing food security amid climate change through rewilding and de novo domestication

A - Papers appearing in refereed journals
Hawkesford, M. J. 2024. Enhancing food security amid climate change through rewilding and de novo domestication. Frontiers in Science. 2, p. 1531043. https://doi.org/10.3389/fsci.2024.1531043

Management choices in cereal production: Lessons from the Broadbalk Long-term trial

A - Papers appearing in refereed journals
Poulton, P. R., Powlson, D. S., Gregory, A. S., Glendining, M. J., Clark, S. J., Wilmer, W. S., Macdonald, A. J., Johnston, A. E. and White, R. P. 2024. Management choices in cereal production: Lessons from the Broadbalk Long-term trial. Proceedings of the International Fertiliser Society. 891, p. all. https://doi.org/10.23637/rothamstedlong-term-experiments-guide-2018

Bugs and bytes: Entomological biomonitoring through the integration of deep learning and molecular analysis for merged community and network analysis

A - Papers appearing in refereed journals
Suresh, M, D., Xin, T., Cook, S. M. and Evans, D.M 2024. Bugs and bytes: Entomological biomonitoring through the integration of deep learning and molecular analysis for merged community and network analysis. Agricultural and Forest Entomology. https://doi.org/10.1111/afe.12667

Geographical Distribution of Atmospheric Nitrogen Deposition in China and Its Response to Emission Control Policy

A - Papers appearing in refereed journals
Wen, Z., Yu, Z., Si, R., Xu, W., Wang, K., Liu, L., Tang, A., Zhang, F., Goulding, K. W. T. and Liu, X. 2024. Geographical Distribution of Atmospheric Nitrogen Deposition in China and Its Response to Emission Control Policy. Chinese Geographical Science. 34 (6), pp. 1017-1031. https://doi.org/10.1007/s11769-024-1471-4

Using dynamic headspace collections for bacterial volatile sampling

D - Report
Novakova, B., Caulfield, J. C., Withall, D., Birkett, M. A., Vuts, J. and Thomas, G. 2024. Using dynamic headspace collections for bacterial volatile sampling. protocols.io https://doi.org/dx.doi.org/10.17504/protocols.io.kqdg3q4eev25/v1

Trichoderma gets by with a little help from Streptomyces: fungal–bacterial symbiosis in plant growth promotion

A - Papers appearing in refereed journals
Reid, T. E. and Gifford, M. L. 2024. Trichoderma gets by with a little help from Streptomyces: fungal–bacterial symbiosis in plant growth promotion. Journal of Experimental Botany. 75 (22), p. 6893–6897. https://doi.org/10.1093/jxb/erae439

Impacts of arable reforestation on soil carbon and nutrients are dependent upon interactions between soil depth and tree species

A - Papers appearing in refereed journals
Judson, J, Chapman, P, Holden, J. and Galdos, M. 2024. Impacts of arable reforestation on soil carbon and nutrients are dependent upon interactions between soil depth and tree species. Catena. 247 (108465). https://doi.org/10.1016/j.catena.2024.108465

Understanding the mechanisms of host-tissue colonisation by Fusarium graminearum

F - Theses
Armer, V.J. 2024. Understanding the mechanisms of host-tissue colonisation by Fusarium graminearum. F - Theses University of Exeter / Rothamsted Research Protecting Crops and the Environment

Burden of selenium deficiency and cost-effectiveness of selenium agronomic biofortification of staple cereals in Ethiopia

A - Papers appearing in refereed journals
Oumer, A., Joy, E. J. M., Groote, H. D., Broadley, M. and Gashu, D. 2024. Burden of selenium deficiency and cost-effectiveness of selenium agronomic biofortification of staple cereals in Ethiopia. British Journal Of Nutrition. 132 (8), pp. 1110-1122. https://doi.org/10.1017/S0007114524001235

Field trial guidelines for evaluating enhanced efficiency fertilizers

A - Papers appearing in refereed journals
Lyons, S. E., Arnall, D. B., Ashford-Kornburger, D., Brouder, S. M., Christian, E., Dobermann, A., Haefele, S. M., Haegele, J., Helmers, M. J., Jin, V. L., Margenot, A. J., McGrath, J. M., Morgan, K. T., Murrell, T. S., Osmond, D. L., Pelster, D. E., Slaton, N. A., Vadas, P. A., Venterea, R. T., Volenec, J. J. and Wagner-Riddle, C. 2024. Field trial guidelines for evaluating enhanced efficiency fertilizers. Soil Science Society of America Journal. 89 (1), p. e20787. https://doi.org/10.1002/saj2.20787

An open science framework and tools to create reproducible food composition data for use in nutrition

A - Papers appearing in refereed journals
Segovia de la Revilla, L, Codd, T., Joy, E.J.M., Mlambo, L., Grande, F., Rittenschober, D., Moltedo, A., Holmes, B.A. and Ander, E.L. 2024. An open science framework and tools to create reproducible food composition data for use in nutrition. Journal of Food Composition and Analysis - JFCA. 137, p. 106894. https://doi.org/10.1016/j.jfca.2024.106894

Inclusion of oil from transgenic Camelina sativa in feed effectively supplies EPA and DHA to Atlantic salmon (Salmo salar) grown to market size in seawater pens

A - Papers appearing in refereed journals
Tocher, D. R., Sprague, M., Han, L., Sayanova, O. V., Norambuena, F., Napier, J. A. and Betancor, M. B. 2024. Inclusion of oil from transgenic Camelina sativa in feed effectively supplies EPA and DHA to Atlantic salmon (Salmo salar) grown to market size in seawater pens. Food Chemistry. 456, p. 139414. https://doi.org/10.1016/j.foodchem.2024.139414

How Tillage System Affects the Soil Carbon Dioxide Emission and Wheat Plants Physiological State

A - Papers appearing in refereed journals
Sawinska, Z., Radzikowska-Kujawska, D., Blecharczyk, A., Switek, S., Piechota, T., Cieslak, A., Cardenas, L. M., Louro-Lopez, A., Gregory, A. S., Coleman, K. and Lark, R. M. 2024. How Tillage System Affects the Soil Carbon Dioxide Emission and Wheat Plants Physiological State. Agronomy. 14 (10), p. 2220. https://doi.org/10.3390/agronomy14102220

Integrating human behaviour and epidemiological modelling: unlocking the remaining challenges

A - Papers appearing in refereed journals
Hill, E. M., Ryan, M., Haw, D., Lynche, M. P., McCabe, R., Milne, A. E., Turner, M. S., Vedhara, K., Zeng, F., Barons, M. J., Nixon, E. J., Parnell, S. and Bolton, K. J. 2024. Integrating human behaviour and epidemiological modelling: unlocking the remaining challenges. Mathematics in Medical and Life Sciences. 1 (1), p. 2429479. https://doi.org/10.1080/29937574.2024.2429479

Advancing mechanistic understanding of cohesive sediment transport: Integrating flume experiments, field measurements, and modelling approaches in a gravel-bed river

A - Papers appearing in refereed journals
Maltauro, R., Stone, M., Collins, A. L. and Krishnappan, B.G. 2024. Advancing mechanistic understanding of cohesive sediment transport: Integrating flume experiments, field measurements, and modelling approaches in a gravel-bed river. Science of the Total Environment. 956 (177301). https://doi.org/10.1016/j.scitotenv.2024.177301

How the Global Burden of Animal Diseases links to the Global Burden of Crop Loss: a food systems perspective

A - Papers appearing in refereed journals
Szyniszewska, A. M., Simpkins, K. M., Thomas, L., Beale, T., Milne, A. E., Brown, M. E., Taylor, B., Oliver, G., Bebber, D. P., Woolman, T., Mahmood, S., Murphy, C., Huntington, B. and Finegold, C. 2024. How the Global Burden of Animal Diseases links to the Global Burden of Crop Loss: a food systems perspective. Scientific and Technical Review. 43, pp. 177-188. https://doi.org/10.20506/rst.43.3530

DGCNN approach links metagenome-derived taxon and functional information providing insight into global soil organic carbon

A - Papers appearing in refereed journals
Gardiner, L., Marshall, M., Reusch, K., Dearden, C., Birmingham, M., Carrieri, A. P., Pyzer-Knapp, E. O., Krishna, R. and Neal, A. L. 2024. DGCNN approach links metagenome-derived taxon and functional information providing insight into global soil organic carbon. NPJ Biofilms Microbiomes. 10, p. 113. https://doi.org/10.1038/s41522-024-00583-9

Validating a cassava production spatial disaggregation model in sub-Saharan Africa

A - Papers appearing in refereed journals
Hassall, K. L., Alonso Chavez, V., Sint, H. M., Helps, J., Abidrabo, P., Okao-Okuja, G., Eboulem, R. G., Amoakon, W. J., Otron, D. H. and Szyniszewska, A. 2024. Validating a cassava production spatial disaggregation model in sub-Saharan Africa. PLOS ONE. https://doi.org/10.1371/journal.pone.0312734

Do expectations that gluten makes you sick lead to gastrointestinal distress?

G - Articles in popular magazines and other technical publications
Brouns, F., Shewry, P. R. and Jonkers, D. 2024. Do expectations that gluten makes you sick lead to gastrointestinal distress? Milling and Grain. 135 (11), pp. 46-53.

Comparing samples of grains and breads: Nutritional Benefits of Ancient Grains and Sourdough

G - Articles in popular magazines and other technical publications
Brouns, F., Shewry, P. R. and Jonkers, D. 2024. Comparing samples of grains and breads: Nutritional Benefits of Ancient Grains and Sourdough. Milling and Grain. 135 (10), pp. 54-56.

Soil organic carbon storage impacts on crop yields in rice-based cropping systems under different long-term fertilisation

A - Papers appearing in refereed journals
Wang, S., Sun, N., Zhang, S., Longdoz, B., Wellens, J., Meersmans, J., Colinet, G., Wu, L. and Xu, M. 2024. Soil organic carbon storage impacts on crop yields in rice-based cropping systems under different long-term fertilisation. European Journal of Agronomy. 161 (November), p. 127357. https://doi.org/10.1016/j.eja.2024.127357

Impact of natural biochar on soil water retention capacity and quinoa plant growth in different soil textures

A - Papers appearing in refereed journals
Daraei, E., Bayat, H. and Gregory, A. S. 2024. Impact of natural biochar on soil water retention capacity and quinoa plant growth in different soil textures. Soil & Tillage Research. 244 (December), p. 106281. https://doi.org/10.1016/j.still.2024.106281

Swarming insects may have finely tuned characteristic Reynolds numbers

A - Papers appearing in refereed journals
Reynolds, A. M. 2024. Swarming insects may have finely tuned characteristic Reynolds numbers. Biomimetics. 9 (11), p. 660. https://doi.org/10.3390/biomimetics9110660

Prey nutrient content is associated with the trophic interactions of spiders and their prey selection under field conditions

A - Papers appearing in refereed journals
Cuff, J. P., Tercel, M. P. T. G., Vaughan, I. P., Drake, L. E., Wilder, S. M., Bell, J. R., Muller, C. T., Wengel, P. O. and Symondson, W. O. C. 2024. Prey nutrient content is associated with the trophic interactions of spiders and their prey selection under field conditions. Oikos. p. e10712. https://doi.org/10.1111/oik.10712

Dynamic Retrieval Augmented Generation of Ontologies using Artificial Intelligence (DRAGON-AI)

A - Papers appearing in refereed journals
Toro, S., Anagnostopoulos, A. V., Bello, S. M., Blumberg, K., Cameron, R., Carmody, L., Diehl, A. D., Dooley, D. M., Duncan, W. D., Fey, P., Gaudet, P., Harris, N. L., Joachimiak, M. P., Kiani, L., Lubiana, T., Munoz-Torres, M. C., O‘Neil, S., Osumi-Sutherland, D., Puig-Barbe, A., Reese, J. T., Reiser, L., Robb, S. M., Ruemping, T., Seager, J., Sid, E., Stefancsik, R., Weber, M., Wood, V., Haendel, M. A. and Mungall, C. J. 2024. Dynamic Retrieval Augmented Generation of Ontologies using Artificial Intelligence (DRAGON-AI). Journal of Biomedical Semantics. 15 (19). https://doi.org/10.1186/s13326-024-00320-3

Unmanaged grasslands are a reservoir of Alternaria and other important fungal species with differing emission patterns

A - Papers appearing in refereed journals
Apangu, G., Frisk, C. A., Petch, G. M., Hanson, M. and Skjoth, C. A. 2024. Unmanaged grasslands are a reservoir of Alternaria and other important fungal species with differing emission patterns. Journal of Environmental Management. 370 (November), p. 122416. https://doi.org/10.1016/j.jenvman.2024.122416

Identifying the Fusarium effector proteases that play a role in pathogenesis in wheat

A - Papers appearing in refereed journals
Srivastava, M., Kroll, E., Darino, M., Smith, D., Urban, M. and Hammond-Kosack, K. E. 2024. Identifying the Fusarium effector proteases that play a role in pathogenesis in wheat. Molecular Plant-Microbe Interactions - MPMI. 37 (5 supplement), p. S1.24. https://doi.org/10.1094/MPMI-37-5-S1.1

Exploring the function of two paralogous F. graminearum effectors reveals an alternative genetic pathway required for virulence on wheat spikes.

A - Papers appearing in refereed journals
Hammond-Kosack, K. E., Rudd, J. J. and Kanja, C. 2024. Exploring the function of two paralogous F. graminearum effectors reveals an alternative genetic pathway required for virulence on wheat spikes. Molecular Plant-Microbe Interactions - MPMI. 37 (5 supplement), p. S1.65. https://doi.org/10.1094/MPMI-37-5-S1.1

A Fusarium graminearum trichothecene mycotoxin facilitates plasmodesmatal crossings by hyphae during wheat infection.

A - Papers appearing in refereed journals
Armer, V., Deeks, M. J. and Hammond-Kosack, K. E. 2024. A Fusarium graminearum trichothecene mycotoxin facilitates plasmodesmatal crossings by hyphae during wheat infection. Molecular Plant-Microbe Interactions - MPMI. 37 (5 supplement), p. S1.138. https://doi.org/10.1094/MPMI-37-5-S1.118

PHI-base - The multi-species Pathogen-Host Interaction Database in 2025

A - Papers appearing in refereed journals
Urban, M., Cuzick, A., Seager, J., Nonavinakere, N., Sahu, J., Sahu, P., Iyer, V. L., Khamari, L., Martinez, M. C. and Hammond-Kosack, K. E. 2024. PHI-base - The multi-species Pathogen-Host Interaction Database in 2025. Nucleic Acids Research. https://doi.org/10.1093/nar/gkae1084

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