Tim Mauchline

NameTim Mauchline
Job titleResearch Scientist - Soil & Plant Microbiology
Email addresstim.mauchline@rothamsted.ac.uk
DepartmentSustainable Agriculture Sciences Harpenden
Research clusterSAS-H: Soil Biology
Preferred citationMauchline, T. H.
OfficeHarpenden

Research outputs

Evidence for diversifying selection of genetic regions of encoding putative collagen-like host-adhesive fibers in Pasteuria penetrans

Srivastava, A., Mohan, S., Mauchline, T. H. and Davies, K. G. 2019. Evidence for diversifying selection of genetic regions of encoding putative collagen-like host-adhesive fibers in Pasteuria penetrans . FEMS Microbiology Ecology. 95 (1), p. fiy217.

Co-occurrence patterns of litter decomposing communities in mangroves indicate a robust community resistant to disturbances

Taketani, R. G., Moitinho, M. A., Mauchline, T. H. and Melo, I. S. 2018. Co-occurrence patterns of litter decomposing communities in mangroves indicate a robust community resistant to disturbances. PeerJ. 6, p. e5710.

Old meets new: most probable number validation of metagenomic and metatranscriptomic datasets in soil

Mauchline, T. H., Hayat, R., Clark, I. M. and Hirsch, P. R. 2018. Old meets new: most probable number validation of metagenomic and metatranscriptomic datasets in soil. Letters in Applied Microbiology. 66 (1), pp. 14-18.

Inorganic Nitrogen Application Affects Both Taxonomical and Predicted Functional Structure of Wheat Rhizosphere Bacterial Communities

Nessner-Kavamura-Noguchi, V., Hayat, R., Clark, I. M., Rossmann, M., Mendes, R., Hirsch, P. R. and Mauchline, T. H. 2018. Inorganic Nitrogen Application Affects Both Taxonomical and Predicted Functional Structure of Wheat Rhizosphere Bacterial Communities. Frontiers in Microbiology. 9, p. 1074.

Is there sufficient Ensifer and Rhizobium species diversity in UK farmland soils to support red clover (Trifolium pratense), white clover (T. repens), lucerne (Medicago sativa) and black medic (M. lupulina)?

Roberts, R., Jackson, R. W., Mauchline, T. H., Hirsch, P. R., Shaw, L. J., Doring, T. F. and Jones, H. E. 2017. Is there sufficient Ensifer and Rhizobium species diversity in UK farmland soils to support red clover (Trifolium pratense), white clover (T. repens), lucerne (Medicago sativa) and black medic (M. lupulina)? Applied Soil Ecology. 120, pp. 35-43.

Life in earth – the root microbiome to the rescue?

Mauchline, T. H. and Malone, J. G. 2017. Life in earth – the root microbiome to the rescue? Current Opinion in Microbiology. 37 (Supplement C), pp. 23-28.

Exploitation of endophytes for sustainable agricultural intensification

Le Cocq, K., Gurr, S. J., Hirsch, P. R. and Mauchline, T. H. 2017. Exploitation of endophytes for sustainable agricultural intensification. Molecular Plant Pathology. 18 (3), pp. 469-473.

Indexing the Pseudomonas specialized metabolome enabled the discovery of poaeamide B and the bananamides

Nguyen, Don D., Melnik, Alexey V., Koyama, N., Lu, Xiaowen, Schorn, Michelle, Fang, Jinshu, Aguinaldo, Kristen, Lincecum Jr, Tommie L., Ghequire, Maarten G. K., Carrion, Victor J., Cheng, Tina L., Duggan, Brendan M., Malone, Jacob G., Mauchline, T. H., Sanchez, Laura M., Kilpatrick, A. Marm, Raaijmakers, Jos M., De Mot, René, Moore, Bradley S., Medema, Marnix H. and Dorrestein, Pieter C. 2016. Indexing the Pseudomonas specialized metabolome enabled the discovery of poaeamide B and the bananamides. Nature Microbiology. 2, p. 16197.

Endophytic bacterial community composition in wheat (Triticum aestivum) is determined by plant tissue type, developmental stage and soil nutrient availability

Robinson, R. J., Fraaije, B. A., Clark, I. M., Jackson, R. W., Hirsch, P. R. and Mauchline, T. H. 2016. Endophytic bacterial community composition in wheat (Triticum aestivum) is determined by plant tissue type, developmental stage and soil nutrient availability. Plant and Soil. 405 (1-2), pp. 381-396.

Pseudomonas spp. diversity is negatively associated with suppression of the wheat take-all pathogen

Mehrabi, Z., Mcmillan, V. E., Clark, I. M., Canning, G., Hammond-Kosack, K. E., Preston, G., Hirsch, P. R. and Mauchline, T. H. 2016. Pseudomonas spp. diversity is negatively associated with suppression of the wheat take-all pathogen. Scientific Reports. 6.

Wheat seed embryo excision enables the creation of axenic seedlings and Koch's postulates testing of putative bacterial endophytes

Robinson, R. J., Fraaije, B. A., Clark, I. M., Jackson, R. W., Hirsch, P. R. and Mauchline, T. H. 2016. Wheat seed embryo excision enables the creation of axenic seedlings and Koch's postulates testing of putative bacterial endophytes. Scientific Reports. 6, p. 25581.

An analysis of Pseudomonas genomic diversity in take-all infected wheat fields reveals the lasting impact of wheat cultivars on the soil microbiota

Mauchline, T. H., Chedom-Fotso, D., Chandra, G., Samuels, T., Greenaway, N., Backhaus, A., Mcmillan, V. E., Canning, G., Powers, S. J., Hammond-Kosack, K. E., Hirsch, P. R., Clark, I. M., Mehrabi, Z., Roworth, J., Burnell, J. and Malone, J. G. 2015. An analysis of Pseudomonas genomic diversity in take-all infected wheat fields reveals the lasting impact of wheat cultivars on the soil microbiota. Environmental Microbiology. 17 (11), pp. 4764-4778.

The importance of the microbial N cycle in soil for crop plant nutrition

Hirsch, P. R. and Mauchline, T. H. 2015. The importance of the microbial N cycle in soil for crop plant nutrition. in: Sariaslani, S. and Gadd, G. M. (ed.) Advances in Applied Microbiology Vol.93 Elsevier.

The impact of tissue type, growth stage and fertilizers on the community structure of cultured bacterial wheat endophytes in the Broadbalk experiment

Robinson, R. R., Fraaije, B. A., Clark, I. M., Jackson, R. W., Hirsch, P. R. and Mauchline, T. H. 2014. The impact of tissue type, growth stage and fertilizers on the community structure of cultured bacterial wheat endophytes in the Broadbalk experiment. American Phytopathological Society (APS).

Assessment of core and accessory genetic variation in Rhizobium leguminosarum symbiovar trifolii strains from diverse locations and host plants using PCR-based methods

Mauchline, T. H., Hayat, R., Roberts, R., Powers, S. J. and Hirsch, P. R. 2014. Assessment of core and accessory genetic variation in Rhizobium leguminosarum symbiovar trifolii strains from diverse locations and host plants using PCR-based methods. Letters in Applied Microbiology. 59 (2), pp. 238-246.

Bacterial endophytes in wheat (Triticum aestivum): isolation, characterisation and bio-prospecting

Robinson, R., Mauchline, T. H., Hirsch, P. R., Jackson, R., Frost, H. and Fraaije, B. A. 2013. Bacterial endophytes in wheat (Triticum aestivum): isolation, characterisation and bio-prospecting. Schneider, C. (ed.) Abstracts 5th International Symposium on Plant Protection and Plant Health in Europe: Endophytes for Plant Protection: the State of the Art, Berlin, 26-29 May 2013 . DPG, Braunschweig. pp. 4-6

Culture-independent molecular approaches to microbial ecology in soil and rhizosphere

Hirsch, P. R., Mauchline, T. H. and Clark, I. M. 2013. Culture-independent molecular approaches to microbial ecology in soil and rhizosphere. in: Debruijn, F. J. (ed.) Molecular microbial ecology of the rhizosphere, Volume 1 John Wiley & Sons Hoboken, N.J.. pp. 45-55

the 16S rRNA gene of Pasteuria penetrans provides an early diagnostic of infection of root-knot nematodes (Meloidogyne spp.)

Rao, U., Mauchline, T. H. and Davies, K. G. 2012. the 16S rRNA gene of Pasteuria penetrans provides an early diagnostic of infection of root-knot nematodes (Meloidogyne spp.). Nematology. 14, pp. 799-804.

Mutualism: plant-microorganism interactions

Mauchline, T. H. 2012. Mutualism: plant-microorganism interactions. in: Hirsch, P. R. and Ogilvie, L. A. (ed.) Microbial ecology theory: current perspectives Caister Academic Press, Norwich, Norfolk. pp. 43-55

Who's who in the plant root microbiome?

Hirsch, P. R. and Mauchline, T. H. 2012. Who's who in the plant root microbiome? Nature Biotechnology. 30, pp. 961-962.

Pasteuria endospores from Heterodera cajani (Nematoda: Heteroderidae) exhibit inverted attachment and altered germination in cross-infection studies with Globodera pallida (Nematoda: Heteroderidae)

Mohan, S., Mauchline, T. H., Rowe, J., Hirsch, P. R. and Davies, K. G. 2012. Pasteuria endospores from Heterodera cajani (Nematoda: Heteroderidae) exhibit inverted attachment and altered germination in cross-infection studies with Globodera pallida (Nematoda: Heteroderidae). FEMS Microbiology Ecology. 79 (3), pp. 675-684.

Exploiting genomics to understand the interactions between root-knot nematodes and Pasteuria penetrans

Schaff, J. E., Mauchline, T. H. and Opperman, C. H. 2011. Exploiting genomics to understand the interactions between root-knot nematodes and Pasteuria penetrans. in: Davies, K. G. and Spiegel, Y. (ed.) Biological control of plant-parasitic nematodes: building coherence between microbial ecology and molecular mechanisms Springer, Dordrecht. pp. 91-113

Identification of new single nucleotide polymorphism-based markers for inter- and intraspecies discrimination of obligate bacterial parasites (Pasteuria spp.) of invertebrates

Mauchline, T. H., Knox, R., Mohan, S., Powers, S. J., Kerry, B. R., Davies, K. G. and Hirsch, P. R. 2011. Identification of new single nucleotide polymorphism-based markers for inter- and intraspecies discrimination of obligate bacterial parasites (Pasteuria spp.) of invertebrates. Applied and Environmental Microbiology. 77, pp. 6388-6394.

Pasteuria from Heterodera cajani reveals evidence that spore germination is a specificity determinant

Mohan, S., Rowe, J., Mauchline, T. H., Davies, K. G., Kerry, B. R. and Gaur, H. S. 2010. Pasteuria from Heterodera cajani reveals evidence that spore germination is a specificity determinant. Abstracts 30th International Symposium of the European Society of Nematologists, Vienna, 19-23 September 2010 .

Pasteuria from Heterodera cajani exhibits altered spore orientation of attachment, germination and infection of Globodera pallida

Mohan, S., Rowe, J., Mauchline, T. H., Davies, K. G., Kerry, B. R. and Gaur, H. S. 2010. Pasteuria from Heterodera cajani exhibits altered spore orientation of attachment, germination and infection of Globodera pallida. Abstracts 30th International Symposium of the European Society of Nematologists, Vienna, 19-23 September 2010 .

A method for release and multiple strand amplification of small quantities of DNA from endospores of the fastidious bacterium Pasteuria penetrans

Mauchline, T. H., Mohan, S., Davies, K. G., Schaff, J. E., Opperman, C. H., Kerry, B. R. and Hirsch, P. R. 2010. A method for release and multiple strand amplification of small quantities of DNA from endospores of the fastidious bacterium Pasteuria penetrans. Letters in Applied Microbiology. 50 (5), pp. 515-521.

Culture-independent molecular techniques for soil microbial ecology

Hirsch, P. R., Mauchline, T. H. and Clark, I. M. 2010. Culture-independent molecular techniques for soil microbial ecology. Soil Biology and Biochemistry. 42 (6), pp. 878-887.

A rapid method for release and multiple strand amplification of small quantities of DNA from Pasteuria penetrans endospores

Mauchline, T. H., Mohan, S., Davies, K. G., Kerry, B. R. and Hirsch, P. R. 2009. A rapid method for release and multiple strand amplification of small quantities of DNA from Pasteuria penetrans endospores. Abstracts AAB Conference on Advances in Nematology, London, 15 December 2009 .

Incidence and severity of damage caused by Meloidogyne spp. and isolation and screening of the nematophagous fungus Pochonia chlamydosporia from some of the main vegetable growing areas in Kenya

Bourne, J. M., Karanja, P. K., Kalisz, H., Karanja, D. K., Mauchline, T. H. and Kerry, B. R. 2004. Incidence and severity of damage caused by Meloidogyne spp. and isolation and screening of the nematophagous fungus Pochonia chlamydosporia from some of the main vegetable growing areas in Kenya. International journal of nematology. 14, pp. 111-122.

Variation in Pochonia chlamydosporia and its potential as a biological control agent for root-knot nematodes

Kerry, B. R., Atkins, S. D., Mauchline, T. H., Morton, C. O. and Hirsch, P. R. 2004. Variation in Pochonia chlamydosporia and its potential as a biological control agent for root-knot nematodes.

Development of a transformation system for the nematophagous fungus Pochonia chlamydosporia

Atkins, S. D., Mauchline, T. H., Kerry, B. R. and Hirsch, P. R. 2004. Development of a transformation system for the nematophagous fungus Pochonia chlamydosporia. Mycological Research. 108 (6), pp. 654-661.

The biocontrol fungus Pochonia chlamydosporia shows nematode host preference at the infraspecific level

Mauchline, T. H., Kerry, B. R. and Hirsch, P. R. 2004. The biocontrol fungus Pochonia chlamydosporia shows nematode host preference at the infraspecific level. Mycological Research. 108 (2), pp. 161-169.

Isolates of the generalist parasite Pochonia chlamydosporia have specific interactions with their nematode hosts

Kerry, B. R., Morton, C. O., Mauchline, T. H. and Hirsch, P. R. 2003. Isolates of the generalist parasite Pochonia chlamydosporia have specific interactions with their nematode hosts. Abstracts British Ecological Society 2003 Annual Symposium on Biological Diversity and Function in Soils, Lancaster, 25-27 March 2003 . pp. 26

How does Pochonia chlamydosporia limit populations of root-knot nematodes?

Kerry, B. R., Atkins, S. D., Gray, P., Hidalgo-Diaz, L., Hirsch, P. R., Mauchline, T. H. and Morton, C. O. 2003. How does Pochonia chlamydosporia limit populations of root-knot nematodes?

Development of a new management strategy for the control of root-knot nematodes (Meloidogyne spp) in organic vegetable production

Atkins, S. D., Hidalgo-Diaz, L., Kalisz, H., Mauchline, T. H., Hirsch, P. R. and Kerry, B. R. 2003. Development of a new management strategy for the control of root-knot nematodes (Meloidogyne spp) in organic vegetable production. Pest Management Science. 59 (2), pp. 183-189.

PCR-based DNA fingerprinting indicates host-related genetic variation in the nematophagous fungus Pochonia chlamydosporia

Morton, C. O., Mauchline, T. H., Kerry, B. R. and Hirsch, P. R. 2003. PCR-based DNA fingerprinting indicates host-related genetic variation in the nematophagous fungus Pochonia chlamydosporia. Mycological Research. 107, pp. 198-205.

Variance in Pochonia chlamydosporia and its importance in the regulation of nematode populations in the rhizosphere

Kerry, B. R., Morton, C. O., Mauchline, T. H. and Hirsch, P. R. 2002. Variance in Pochonia chlamydosporia and its importance in the regulation of nematode populations in the rhizosphere. Abstracts Symposium on the Role of Genetics and Evolution in Biological Control, Montpellier, 14-16 October 2002 .

Isolates of the generalist parasite Pochonia chlamydosporia have specific interactions with their nematode hosts

Kerry, B. R., Morton, C. O., Mauchline, T. H. and Hirsch, P. R. 2002. Isolates of the generalist parasite Pochonia chlamydosporia have specific interactions with their nematode hosts. Abstracts 4th International Congress of Nematology, Tenerife, 8-13 June 2002 .

Quantification in soil and the rhizosphere of the nematophagous fungus Verticillium chlamydosporium by competitive PCR and comparison with selective plating

Mauchline, T. H., Kerry, B. R. and Hirsch, P. R. 2002. Quantification in soil and the rhizosphere of the nematophagous fungus Verticillium chlamydosporium by competitive PCR and comparison with selective plating. Applied and Environmental Microbiology. 68, pp. 1846-1853.

Studies into the molecular ecology of the nematophagous fungus Verticillium chlamydosporium

Mauchline, T. H. 2001. Studies into the molecular ecology of the nematophagous fungus Verticillium chlamydosporium. F - Theses

Measurement of the impact of Verticillium chlamydosporium on the dynamics of sedentary nematodes in the rhizosphere

Kerry, B. R., Atkins, S. D., Mauchline, T. H. and Hirsch, P. R. 2001. Measurement of the impact of Verticillium chlamydosporium on the dynamics of sedentary nematodes in the rhizosphere.

Molecular approaches to studies of the interactions of Verticillium chlamydosporium in the rhizosphere of root-knot nematode infected plants

Kerry, B. R., O'flaherty, S., Mauchline, T. H., Morton, C. O. and Hirsch, P. R. 2001. Molecular approaches to studies of the interactions of Verticillium chlamydosporium in the rhizosphere of root-knot nematode infected plants. Abstracts 4th International Scientific Seminar of Plant Health/33rd Annual Meeting of the Organization of Nematologists of Tropical America (ONTA), Varadera, Cuba, 11-15 June 2001 . pp. 12-13

Methods for studying the nematophagous fungus Verticillium chlamydosporium in the root environment

Hirsch, P. R., Atkins, S. D., Mauchline, T. H., Morton, C. O., Davies, K. G. and Kerry, B. R. 2001. Methods for studying the nematophagous fungus Verticillium chlamydosporium in the root environment. Plant and Soil. 232, pp. 21-30.

Screening of Polish, other European and tropical isolates of Verticillium chlamydosporium to assess their potential as biological control agents of root-knot nematodes

Sosnowska, D., Mauchline, T. H., Bourne, J. M. and Kerry, B. R. 2001. Screening of Polish, other European and tropical isolates of Verticillium chlamydosporium to assess their potential as biological control agents of root-knot nematodes. Journal of plant protection research. 41, pp. 77-84.

Molecular methods to study the rhizosphere interactions of Verticillium chlamydosporium

Kerry, B. R., Mauchline, T. H., Atkins, S. D., Davies, K. G. and Hirsch, P. R. 2000. Molecular methods to study the rhizosphere interactions of Verticillium chlamydosporium. Abstracts 39th Annual Meeting of the Society of Nematologists, Quebec, 26-28 June 2000 .

Detection of the nematophagous fungus Verticillium chlamydosporium in nematode-infested plant roots using PCR

Hirsch, P. R., Mauchline, T. H., Mendum, T. A. and Kerry, B. R. 2000. Detection of the nematophagous fungus Verticillium chlamydosporium in nematode-infested plant roots using PCR. Mycological Research. 104 (4), pp. 435-439.

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