SAS-H: Systems Modelling

TitleSAS-H: Systems Modelling
TypeResearch cluster

Outputs

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Boundary line analysis of the effect of water-filled pore space on nitrous oxide emission from cores of arable soil

A - Papers appearing in refereed journals
Lark, R. M. and Milne, A. E. 2016. Boundary line analysis of the effect of water-filled pore space on nitrous oxide emission from cores of arable soil. European Journal of Soil Science. 67 (2), pp. 148-159. https://doi.org/10.1111/ejss.12318

Defining and quantifying the resilience of responses to disturbance: a conceptual and modelling approach from soil science

A - Papers appearing in refereed journals
Todman, L. C., Fraser, F. C., Corstanje, R., Deeks, L. K., Harris, J. A., Pawlett, M., Ritz, K. and Whitmore, A. P. 2016. Defining and quantifying the resilience of responses to disturbance: a conceptual and modelling approach from soil science. Scientific Reports. 6, p. 28426. https://doi.org/10.1038/srep28426

The North Wyke Farm Platform: effect of temperate grassland farming systems on soil moisture contents, runoff and associated water quality dynamics

A - Papers appearing in refereed journals
Orr, R. J., Murray, P. J., Eyles, C. J., Blackwell, M. S. A., Cardenas, L. M., Collins, A. L., Dungait, J. A. J., Goulding, K. W. T., Griffith, B. A., Gurr, S. J., Harris, P., Hawkins, J. M. B., Misselbrook, T. H., Rawlings, C. J., Shepherd, A., Sint, H. M., Takahashi, T., Tozer, K. N., Whitmore, A. P., Wu, L. and Lee, M. R. F. 2016. The North Wyke Farm Platform: effect of temperate grassland farming systems on soil moisture contents, runoff and associated water quality dynamics. European Journal of Soil Science. 67 (4), pp. 374-385. https://doi.org/10.1111/ejss.12350

Long-term management changes in topsoil and subsoil organic carbon and nitrogen dynamics in a temperate agricultural system

A - Papers appearing in refereed journals
Gregory, A. S., Dungait, J. A. J., Watts, C. W., Bol, R., Dixon, E. R., White, R. P. and Whitmore, A. P. 2016. Long-term management changes in topsoil and subsoil organic carbon and nitrogen dynamics in a temperate agricultural system. European Journal of Soil Science. 67 (4), pp. 421-430. https://doi.org/10.1111/ejss.12359

Implementing land-use and ecosystem service effects into an integrated bioenergy value chain optimisation framework

A - Papers appearing in refereed journals
Guo, M., Richter, G. M., Holland, R. A., Eigenbrod, F., Taylor, G. and Shah, N. 2016. Implementing land-use and ecosystem service effects into an integrated bioenergy value chain optimisation framework. Computers and Chemical Engineering. 91, pp. 392-406. https://doi.org/10.1016/j.compchemeng.2016.02.011

Development of a sink-source interaction model for the growth of short-rotation coppice willow and in silico exploration of genotype x environment effects

A - Papers appearing in refereed journals
Cerasuolo, M., Richter, G. M., Richard, B., Cunniff, J., Girbau, S., Shield, I. F., Purdy, S. and Karp, A. 2016. Development of a sink-source interaction model for the growth of short-rotation coppice willow and in silico exploration of genotype x environment effects. Journal of Experimental Botany. 67 (3), pp. 961-977. https://doi.org/10.1093/jxb/erv507

Designing a sampling scheme to reveal correlations between weeds and soil properties at multiple spatial scales

A - Papers appearing in refereed journals
Metcalfe, H., Milne, A. E., Webster, R., Lark, R. M., Murdoch, A. J. and Storkey, J. 2016. Designing a sampling scheme to reveal correlations between weeds and soil properties at multiple spatial scales. Weed Research. 56 (1), pp. 1-13. https://doi.org/10.1111/wre.12184

Bringing non-energy systems and ecosystem services matrix into UK Bioenergy Value Chain Design

C1 - Edited contributions to conferences/learned societies
Shah, N., Guo, M., Richter, G. M., Holland, R., Eigenbrod, F., Taylor, G., Dodds, P., Ekins, P., Mawhood, R., Sabio, N., Slade, R. and Thornley, P. 2015. Bringing non-energy systems and ecosystem services matrix into UK Bioenergy Value Chain Design. Biomass and Energy Crops V. Aspects of Applied Biology 131 . Association of Applied Biologists (AAB) Wellesbourne Warwick . pp. 105-107

Optimizing biomass production systems - exploiting diverse growth traits in different environments

C1 - Edited contributions to conferences/learned societies
Richter, G. M., Cerasuolo, M., Cunniff, J., Agostini, F. and Richard, B. 2015. Optimizing biomass production systems - exploiting diverse growth traits in different environments. Biomass and Energy Crops V. Aspects of Applied Biology 131 . Association of Applied Biologists (AAB) Wellesbourne Warwick . pp. 97-103

Soil water uptake from SRC willow simulated using the process-based model LUCASS

C1 - Edited contributions to conferences/learned societies
Richard, B., Cunniff, J., Cerasuolo, M., Barraclough, T. J. P., Gregory, A. S. and Richter, G. M. 2015. Soil water uptake from SRC willow simulated using the process-based model LUCASS. Biomass and Energy Crops V. Aspects of Applied Biology 131 . Association of Applied Biologists (AAB) Wellesbourne Warwick . pp. 251-255

The effect of farmers' decisions on pest control with Bt crops: a billion dollar game of strategy

A - Papers appearing in refereed journals
Milne, A. E., Bell, J. R., Hutchison, W. D., Van Den Bosch, F., Mitchell, P. D., Crowder, D., Parnell, S. and Whitmore, A. P. 2015. The effect of farmers' decisions on pest control with Bt crops: a billion dollar game of strategy. PLOS Computational Biology. 11, p. e1004483. https://doi.org/10.1371/journal.pcbi.1004483

Nitrous oxide emissions from fertilised UK arable soils: fluxes, emission factors and mitigation

A - Papers appearing in refereed journals
Bell, M. J., Hinton, N., Cloy, J. M., Topp, C. F. E., Rees, R. M., Cardenas, L. M., Scott, T., Webster, C. P., Ashton, R. W., Whitmore, A. P., Williams, J. R., Balshaw, H., Paine, F., Goulding, K. W. T. and Chadwick, D. R. 2015. Nitrous oxide emissions from fertilised UK arable soils: fluxes, emission factors and mitigation. Agriculture, Ecosystems & Environment. 212, pp. 134-147. https://doi.org/10.1016/j.agee.2015.07.003

Modelling the impact of environmental changes on grassland systems with SPACSYS

C1 - Edited contributions to conferences/learned societies
Wu, L., Whitmore, A. P. and Bellocchi, G. 2015. Modelling the impact of environmental changes on grassland systems with SPACSYS. Proceedings of the MACSUR International Livestock Modelling and Research Colloquium . Cambridge University Press (CUP) Cambridge. https://doi.org/10.1017/S2040470014000508

Technologies for increasing carbon storage in soil to mitigate climate change

A - Papers appearing in refereed journals
Whitmore, A. P., Kirk, G. J. D. and Rawlins, B. G. 2015. Technologies for increasing carbon storage in soil to mitigate climate change. Soil Use and Management. 31 (Suppl. 1), pp. 62-71. https://doi.org/10.1111/sum.12115

Probing the basis of soil resilience

A - Papers appearing in refereed journals
Corstanje, R., Deeks, L. R., Whitmore, A. P., Gregory, A. S. and Ritz, K. 2015. Probing the basis of soil resilience. Soil Use and Management. 31 (Suppl. 1), pp. 72-81. https://doi.org/10.1111/sum.12107

A review of the impacts of degradation threats on soil properties in the UK

A - Papers appearing in refereed journals
Gregory, A. S., Ritz, K., McGrath, S. P., Quinton, J. N., Goulding, K. W. T., Jones, R. J. A., Harris, J. A., Bol, R., Wallace, P., Pilgrim, E. S. and Whitmore, A. P. 2015. A review of the impacts of degradation threats on soil properties in the UK. Soil Use and Management. 31 (S1), pp. 1-15. https://doi.org/10.1111/sum.12212

Communicating the uncertainty in estimated greenhouse gas emissions from agriculture

A - Papers appearing in refereed journals
Milne, A. E., Glendining, M. J., Lark, R. M., Perryman, S. A. M., Gordon, T. and Whitmore, A. P. 2015. Communicating the uncertainty in estimated greenhouse gas emissions from agriculture. Journal of Environmental Management. 160, pp. 139-153. https://doi.org/10.1016/j.jenvman.2015.05.034

Carbon sequestration by perennial energy crops: is the jury still out?

A - Papers appearing in refereed journals
Agostini, F., Gregory, A. S. and Richter, G. M. 2015. Carbon sequestration by perennial energy crops: is the jury still out? BioEnergy Research. 8 (3), pp. 1057-1080. https://doi.org/10.1007/s12155-014-9571-0

Simulation of nitrous oxide emissions at field scale using the SPACSYS model

A - Papers appearing in refereed journals
Wu, L., Rees, R. M., Tarsitano, D., Zhang, X., Jones, S. K. and Whitmore, A. P. 2015. Simulation of nitrous oxide emissions at field scale using the SPACSYS model. Science of the Total Environment. 530-531, pp. 76-86. https://doi.org/10.1016/j.scitotenv.2015.05.064

Sequestration of C in soils under Miscanthus can be marginal and is affected by genotype-specific root distribution

A - Papers appearing in refereed journals
Richter, G. M., Agostini, F., Redmile-Gordon, M. A., White, Robin P. and Goulding, K. W. T. 2015. Sequestration of C in soils under Miscanthus can be marginal and is affected by genotype-specific root distribution. Agriculture, Ecosystems & Environment. 200, pp. 169-177. https://doi.org/10.1016/j.agee.2014.11.011

Exploring the spatial variation in the fertilizer-nitrogen requirement of wheat within fields

A - Papers appearing in refereed journals
Kindred, D. R., Milne, A. E., Webster, R., Marchant, B. P. and Sylvester-Bradley, R. 2015. Exploring the spatial variation in the fertilizer-nitrogen requirement of wheat within fields. The Journal of Agricultural Science. 153 (1), pp. 25-41. https://doi.org/10.1017/S0021859613000919

RothC - A model for the turnover of carbon in soil Model description and users guide (Windows version) (updated June 2014)

A - Papers appearing in refereed journals
Coleman, K. and Jenkinson, D. S. 2014. RothC - A model for the turnover of carbon in soil Model description and users guide (Windows version) (updated June 2014). pp. 1-44.

Exploiting yield maps and soil management zones

A - Papers appearing in refereed journals
Muhammed, S. E., Milne, A. E., Marchant, B. P., Griffin, S. and Whitmore, A. P. 2014. Exploiting yield maps and soil management zones. Proceedings of the International Fertiliser Society. 22, p. poster.

The North Wyke Farm Platform, a national capability for research into sustainability of temperate agricultural grassland management: data and modelling opportunities

C2 - Non-edited contributions to conferences
Harris, P., Griffith, B. A., Shepherd, A., Peukert, S., Hawkins, J. M. B., Elyes, C., Whitmore, A. P., Blackwell, M. S. A., Brazier, R. E., Cardenas, L. M., Wu, L., Dungait, J. A. J., Collins, A. L., Gurr, S. J., Murray, P. J., Goulding, K. W. T. and Orr, R. J. 2014. The North Wyke Farm Platform, a national capability for research into sustainability of temperate agricultural grassland management: data and modelling opportunities. Abstracts Tereno International Conference: from Observation to Prediction in Terrestrial Systems, Bonn, 29 September-2 October 2014 . pp. P2-07

Estimating on-farm biomass supply of Miscanthus combining soil mapping, yield modelling and remote sensing

C2 - Non-edited contributions to conferences
Richter, G. M., Agostini, F., Barker, A., Costomiris, D. and Qi, A. 2014. Estimating on-farm biomass supply of Miscanthus combining soil mapping, yield modelling and remote sensing. Abstracts 22nd European Biomass Conference and Ehibition (EUBCE), Hamburg, 23-26 June 2014 .

Understanding the scale-dependence of the relations between soil conditions and weed density and the implications for precision management of weeds

A - Papers appearing in refereed journals
Metcalfe, H., Milne, A. E., Murdoch, A., Webster, R., Lark, R. M. and Storkey, J. 2014. Understanding the scale-dependence of the relations between soil conditions and weed density and the implications for precision management of weeds. Aspects of Applied Biology. 127, pp. 165-171.

Exploiting yield maps and soil management zones

G - Articles in popular magazines and other technical publications
Milne, A. E., Marchant, B. P., Whitmore, A. P. and Muhammed, S. E. 2014. Exploiting yield maps and soil management zones. Landmark. 19, pp. 3-4.

Detecting land use and land management influences on catchment hydrology by modelling and wavelets

A - Papers appearing in refereed journals
Rust, W., Corstanje, R., Holman, I. P. and Milne, A. E. 2014. Detecting land use and land management influences on catchment hydrology by modelling and wavelets. Journal of Hydrology. 517, pp. 378-389. https://doi.org/10.1016/j.jhydrol.2014.05.052

Does organic management lead to enhanced soil physical quality?

A - Papers appearing in refereed journals
Papadopoulos, A., Bird, N. R. A., Whitmore, A. P. and Mooney, S. J. 2014. Does organic management lead to enhanced soil physical quality? Geoderma. 213, pp. 435-443. https://doi.org/10.1016/j.geoderma.2013.08.033

Nitrous oxide emissions from fertilised UK arable soils: quantification and mitigation

C2 - Non-edited contributions to conferences
Bell, M., Winning, M., Cloy, J., Rees, B., Cardenas, L. M., Donovan, N., Scott, T., Webster, C. P., Whitmore, A. P., Williams, J., Balshaw, H., Paine, F. and Chadwick, D. R. 2014. Nitrous oxide emissions from fertilised UK arable soils: quantification and mitigation. Cordovil, C. M. d. S. (ed.) Abstracts 18th Nitrogen Workshop, Lisbon, 30 June- 3 July 2014 . pp. 375-376

Analysis of uncertainties in the estimates of nitrous oxide and methane emissions in the UK's greenhouse gas inventory for agriculture

A - Papers appearing in refereed journals
Milne, A. E., Glendining, M. J., Bellamy, P., Misselbrook, T. H., Gilhespy, S. L., Rivas Casado, M., Hulin, A., Van Oijen, M. and Whitmore, A. P. 2014. Analysis of uncertainties in the estimates of nitrous oxide and methane emissions in the UK's greenhouse gas inventory for agriculture. Atmospheric Environment. 82, pp. 94-105. https://doi.org/10.1016/j.atmosenv.2013.10.012

An assessment of subsoil organic carbon stocks in England and Wales

A - Papers appearing in refereed journals
Gregory, A. S., Kirk, G. J. D., Keay, C. A., Rawlins, B. G., Wallace, P. and Whitmore, A. P. 2014. An assessment of subsoil organic carbon stocks in England and Wales. Soil Use and Management. 30 (1), pp. 10-22. https://doi.org/10.1111/sum.12085

Genetics, genomics and crop modelling: integrative approaches to the improvement of biomass willows

B - Book chapters etc edited externally
Karp, A., Richter, G. M., Shield, I. F. and Hanley, S. J. 2014. Genetics, genomics and crop modelling: integrative approaches to the improvement of biomass willows. in: McCann, M. C. (ed.) Plants and bioenergy. Advances in Plant Biology, Vol 4 Springer, New York. pp. 107-130

Using SPACSYS to analyse the interaction between plant and environment in a systems approach

C2 - Non-edited contributions to conferences
Wu, L. and Whitmore, A. P. 2013. Using SPACSYS to analyse the interaction between plant and environment in a systems approach. Abstracts Workshop on Exploring New Ideas for Trade and Agriculture Model Integration for Assessing the Impacts of Climate Change on Food Security, Haifa, 3-5 March 2013 .

Modelling the path to better soil applied pesticides

C2 - Non-edited contributions to conferences
Sweeney, P., Travis, K., Whalley, W. R., Whitmore, A. P., Dailey, A. G., Wu, L., Van Beinum, W. and Brown, C. 2013. Modelling the path to better soil applied pesticides. Abstracts Conference on Pesticide Behaviour in Soils, Water and Air, York, 2-4 September 2013 .

Spatial analysis of gilgai patterns

G - Articles in popular magazines and other technical publications
Webster, R., Milne, A. E. and Lark, R. M. 2013. Spatial analysis of gilgai patterns. Pedometron. 33, pp. 4-9.

Reviewing models of land availability and dynamics for biofuel crops in the United States and the European Union

A - Papers appearing in refereed journals
Li, R., Di Virgilio, N., Guan, Q., Feng, S. and Richter, G. M. 2013. Reviewing models of land availability and dynamics for biofuel crops in the United States and the European Union. Biofuels, Bioproducts and Biorefining - BIOFPR. 7 (6), pp. 666-683. https://doi.org/10.1002/bbb.1419

Wavelet analysis of the variability of nitrous oxide emissions from soil at decameter to kilometer scales

A - Papers appearing in refereed journals
Milne, A. E., Haskard, K. A., Webster, C. P., Truan, I. A., Goulding, K. W. T. and Lark, R. M. 2013. Wavelet analysis of the variability of nitrous oxide emissions from soil at decameter to kilometer scales. Journal of Environmental Quality. 42, pp. 1070-1079. https://doi.org/10.2134/jeq2012.0007

What do we need to know to enhance the environmental sustainability of agricultural production? A prioritisation of knowledge needs for the UK food system

A - Papers appearing in refereed journals
Dicks, L. V., Bardgett, R. D., Bell, J., Benton, T. G., Booth, A., Bouwman, J., Brown, C., Bruce, A., Burgess, P. J., Butler, S. J., Crute, I. R., Dixon, F., Drummond, C., Freckleton, R. P., Gill, M., Graham, A., Hails, R. S., Hallett, J., Hart, B., Hillier, J., Holland, J. M., Huxley, J., Ingram, J. S. I., King, V., MacMillan, T., Mcgonigle, D. F., McQuaid, C. F., Nevard, T., Norman, S., Norris, K., Pazderka, C., Poonaji, I., Quinn, C. H., Ramsden, S. J., Sinclair, D., Siriwardena, G. M., Vickery, J. A., Whitmore, A. P., Wolmer, W. and Sutherland, W. J. 2013. What do we need to know to enhance the environmental sustainability of agricultural production? A prioritisation of knowledge needs for the UK food system. Sustainability. 5 (7), pp. 3095-3115. https://doi.org/10.3390/su5073095

A pseudo-3D model to optimise the target traits of light interception in short-rotation coppice willow

A - Papers appearing in refereed journals
Cerasuolo, M., Richter, G. M., Cunniff, J., Purdy, S., Shield, I. F. and Karp, A. 2013. A pseudo-3D model to optimise the target traits of light interception in short-rotation coppice willow. Agricultural and Forest Meteorology. 173, pp. 127-138. https://doi.org/10.1016/j.agrformet.2012.11.022

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