Genetic diversity in the mycoparasite Sphaerellopsis filum inferred from AFLP analysis and ITS-5.8S sequences

Bayon, C., Yuan, Z-W., Ruiz, C., Liesebach, M. and Pei, M. H. 2006. Genetic diversity in the mycoparasite Sphaerellopsis filum inferred from AFLP analysis and ITS-5.8S sequences. Mycological Research. 110, pp. 1200-1206. https://doi.org/10.1016/j.mycres.2006.06.001

Related outputs

Data from: A conserved fungal Knr4/Smi1 protein is vital for maintaining cell wall integrity and host plant pathogenesis

N - Datasets

Kroll, E., Bayon, C., Rudd, J. J., Armer, V., Magaji-Umashankar, A., Ames, R., Urban, M., Brown, N. A. and Hammond-Kosack, K. E. 2024. Data from: A conserved fungal Knr4/Smi1 protein is vital for maintaining cell wall integrity and host plant pathogenesis. Rothamsted Research. https://doi.org/10.23637/rothamsted.99163

Stacked mutations in wheat homologues of rice SEMI-DWARF1 confer a novel semi-dwarf phenotype

A - Papers appearing in refereed journals

Ndreca, B., Huttly, A. K., Bibi, S., Bayon, C., Lund, G., Ham, J., Alarcon-Reverte, R., Addy, J., Tarkowská, D., Pearce, S., Hedden, P., Thomas, S. G. and Phillips, A. L. 2024. Stacked mutations in wheat homologues of rice SEMI-DWARF1 confer a novel semi-dwarf phenotype. BMC Plant Biology. 24, p. 384. https://doi.org/10.1186/s12870-024-05098-1

Fungal plant pathogen "mutagenomics" reveals tagged and untagged mutations in Zymoseptoria tritici and identifies SSK2 as key morphogenesis and stress-responsive virulence factor

A - Papers appearing in refereed journals

Blyth, H., Smith, D., King, R., Bayon, C., Ashfield, T., Walpole, H., Venter, E., Kanyuka, K. and Rudd, J. J. 2023. Fungal plant pathogen "mutagenomics" reveals tagged and untagged mutations in Zymoseptoria tritici and identifies SSK2 as key morphogenesis and stress-responsive virulence factor. Frontiers in Plant Science. 14, p. 1140824. https://doi.org/10.3389/fpls.2023.1140824

Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen

A - Papers appearing in refereed journals

Chen, H., King, R., Smith, D., Bayon, C., Ashfield, T., Torriani, S., Kanyuka, K., Hammond-Kosack, K. E., Bieri, S. and Rudd, J. J. 2023. Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen. BMC Biology. 21, p. 24. https://doi.org/10.1186/s12915-023-01520-6

Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen

N - Datasets

Chen, H., King, R., Smith, D., Bayon, C., Ashfield, T., Torriani, S., Kanyuka, K., Hammond-Kosack, K. E., Bieri, S. and Rudd, J. J. 2022. Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen. Rothamsted Research. https://doi.org/10.23637/rothamsted.98q90

Induction of distinct plant cell death programs by secreted proteins from the wheat pathogen Zymoseptoria tritici

A - Papers appearing in refereed journals

Welch, T., Bayon, C., Rudd, J. J., Kanyuka, K. and Kettles, G. J. 2022. Induction of distinct plant cell death programs by secreted proteins from the wheat pathogen Zymoseptoria tritici. Scientific Reports. 12, p. 17880. https://doi.org/10.1038/s41598-022-22660-9

sRNA profiling combined with gene function analysis reveals a lack of evidence for cross-kingdom RNAi in the wheat – Zymoseptoria tritici pathosystem

A - Papers appearing in refereed journals

Kettles, G. J., Hofinger, B. J., Hu, P., Bayon, C., Rudd, J. J., Balmer, D., Courbot, M., Hammond-Kosack, K. E., Scalliet, G. and Kanyuka, K. 2019. sRNA profiling combined with gene function analysis reveals a lack of evidence for cross-kingdom RNAi in the wheat – Zymoseptoria tritici pathosystem. Frontiers in Plant Science. 10 (892). https://doi.org/10.3389/fpls.2019.00892

Analysis of small RNAs in the Zymoseptoria tritici – wheat interaction

C2 - Non-edited contributions to conferences

Kettles, G. J., Hofinger, B. J., Hu, P., Bayon, C., Rudd, J. J., Balmer, D., Courbot, M., Hammond-Kosack, K. E., Scalliet, G. and Kanyuka, K. 2019. Analysis of small RNAs in the Zymoseptoria tritici – wheat interaction. 30th Fungal Genetics Conference. Pacific Grove, California, USA 12 Mar 2019

Analysis of small RNA silencing in Zymoseptoria tritici – wheat interactions

A - Papers appearing in refereed journals

Kettles, G. J., Hofinger, B. J., Hu, P., Bayon, C., Rudd, J. J., Balmer, D., Courbot, M., Hammond-Kosack, K. E., Scalliet, G. and Kanyuka, K. 2018. Analysis of small RNA silencing in Zymoseptoria tritici – wheat interactions. bioRxiv. https://doi.org/10.1101/501650

Characterization of an antimicrobial and phytotoxic ribonuclease secreted by the fungal wheat pathogen Zymoseptoria tritici

A - Papers appearing in refereed journals

Kettles, G. J., Bayon, C., Sparks, C. A., Canning, G., Kanyuka, K. and Rudd, J. J. 2018. Characterization of an antimicrobial and phytotoxic ribonuclease secreted by the fungal wheat pathogen Zymoseptoria tritici. New Phytologist. 217 (1), pp. 320-331. https://doi.org/10.1111/nph.14786

Phenotypic, comparative genomic and transcriptomic analysis of recently collected European Zymoseptoria tritici strains

C2 - Non-edited contributions to conferences

Chen, H., Bayon, C., King, R., Torriani, S. F. F., Bieri, S., Kanyuka, K., Hammond-Kosack, K. E. and Rudd, J. J. 2017. Phenotypic, comparative genomic and transcriptomic analysis of recently collected European Zymoseptoria tritici strains. Zymoseptoria Meeting, 2017, Kiel, Germany.

Apoplastic recognition of multiple candidate effectors from the wheat pathogen Zymoseptoria tritici in the nonhost plant Nicotiana benthamiana

A - Papers appearing in refereed journals

Kettles, G. J., Bayon, C., Canning, G., Rudd, J. J. and Kanyuka, K. 2017. Apoplastic recognition of multiple candidate effectors from the wheat pathogen Zymoseptoria tritici in the nonhost plant Nicotiana benthamiana. New Phytologist. 213 (1), pp. 338-350. https://doi.org/10.1111/nph.14215

Overexpression of the sterol 14α-demethylase gene (MgCYP51) in Mycosphaerella graminicola isolates confers a novel azole fungicide sensitivity phenotype.

A - Papers appearing in refereed journals

Cools, H. J., Bayon, C., Atkins, S., Lucas, J. A. and Fraaije, B. A. 2012. Overexpression of the sterol 14α-demethylase gene (MgCYP51) in Mycosphaerella graminicola isolates confers a novel azole fungicide sensitivity phenotype. Pest Management Science. 68 (7), pp. 1034-1040. https://doi.org/10.1002/ps.3263

Risk assessment studies on succinate dehydrogenase inhibitors, the new weapons in the battle to control Septoria leaf blotch in wheat

A - Papers appearing in refereed journals

Fraaije, B. A., Bayon, C., Atkins, S., Cools, H. J., Lucas, J. A. and Fraaije, M. W. 2012. Risk assessment studies on succinate dehydrogenase inhibitors, the new weapons in the battle to control Septoria leaf blotch in wheat. Molecular Plant Pathology. 13 (3), pp. 263-275. https://doi.org/10.1111/j.1364-3703.2011.00746.x

A new species of Melampsora rust on Salix elbursensis from Iran

A - Papers appearing in refereed journals

Damadi, S. M., Pei, M. H., Smith, J. A. and Abbasi, M. 2011. A new species of Melampsora rust on Salix elbursensis from Iran. Forest Pathology. 41 (5), pp. 392-397. https://doi.org/10.1111/j.1439-0329.2010.00699.x

Genetic mapping of rust resistance loci in biomass willow

A - Papers appearing in refereed journals

Hanley, S. J., Pei, M. H., Powers, S. J., Ruiz, C., Mallott, M. D., Barker, J. H. A. and Karp, A. 2011. Genetic mapping of rust resistance loci in biomass willow. Tree Genetics & Genomes. 7 (3), pp. 597-608. https://doi.org/10.1007/s11295-010-0359-x

Genetic improvement of willow for bioenergy and biofuels

A - Papers appearing in refereed journals

Karp, A., Hanley, S. J., Trybush, S. O., Macalpine, W. J., Pei, M. H. and Shield, I. F. 2011. Genetic improvement of willow for bioenergy and biofuels. Journal of Integrative Plant Biology. 53 (2), pp. 151-165. https://doi.org/10.1111/j.1744-7909.2010.01015.x

Succinate dehydrogenase inhibitor resistance risk assessment studies on Mycosphaerella graminicola the causal agent of septoria leaf blotch

C2 - Non-edited contributions to conferences

Bayon, C., Fraaije, M. W., Cools, H. J., Rogers, S. L., Lucas, J. A. and Fraaije, B. A. 2010. Succinate dehydrogenase inhibitor resistance risk assessment studies on Mycosphaerella graminicola the causal agent of septoria leaf blotch.

Mendelian inheritance of rust resistance to Melampsora larici-epitea in crosses between Salix sachalinensis and S. viminalis

A - Papers appearing in refereed journals

Pei, M. H., Ruiz, C., Shield, I. F., Macalpine, W. J., Lindegaard, K., Bayon, C. and Karp, A. 2010. Mendelian inheritance of rust resistance to Melampsora larici-epitea in crosses between Salix sachalinensis and S. viminalis. Plant Pathology. 59 (5), pp. 862-872. https://doi.org/10.1111/j.1365-3059.2010.02317.x

Effects of DMI fungicides on selection of CYP51 variants in UK populations of Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Fraaije, B. A., Rogers, S., Bayon, C., Cools, H. J. and Lucas, J. A. 2010. Effects of DMI fungicides on selection of CYP51 variants in UK populations of Mycosphaerella graminicola. Abstracts 16th International Reinhardsbrunn Symposium: Modern Fungicides and Antifungal Compounds, Friedrichroda, 25-29 April 2010 . pp. 84

Interactions between Melamspora larici-epitea pathotypes and the mycoparasite Sphaerellopsis filum from willow rusts

A - Papers appearing in refereed journals

Pei, M. H., Ruiz, C., Hunter, T. and Bayon, C. 2010. Interactions between Melamspora larici-epitea pathotypes and the mycoparasite Sphaerellopsis filum from willow rusts. Forest Pathology. 40 (1), pp. 33-42. https://doi.org/10.1111/j.1439-0329.2009.00604.x

DArT markers: diversity analyses, genomes comparison, mapping and integration with SSR markers in Triticum monococcum

A - Papers appearing in refereed journals

Jing, H-C., Bayon, C., Kanyuka, K., Berry, S., Wenzl, P., Huttner, E., Kilian, A. and Hammond-Kosack, K. E. 2009. DArT markers: diversity analyses, genomes comparison, mapping and integration with SSR markers in Triticum monococcum. BMC Genomics. 10, p. 458 (17pp). https://doi.org/10.1186/1471-2164-10-458

Genetic structure and population dynamics of a heteroecious plant pathogen Melampsora larici-epitea in short-rotation coppice willow plantations

A - Papers appearing in refereed journals

Bayon, C., Pei, M. H., Ruiz, C., Hunter, T., Karp, A. and Tubby, I. 2009. Genetic structure and population dynamics of a heteroecious plant pathogen Melampsora larici-epitea in short-rotation coppice willow plantations. Molecular Ecology. 18, pp. 3006-3019. https://doi.org/10.1111/j.1365-294X.2009.04255.x

Mutation discovery for crop improvement

A - Papers appearing in refereed journals

Parry, M. A. J., Madgwick, P. J., Bayon, C., Tearall, K., Hernandez-Lopez, A., Baudo, M., Rakszegi, M., Hamada, W., Al-Yassin, A., Ouabbou, H., Labhilili, M. and Phillips, A. L. 2009. Mutation discovery for crop improvement. Journal of Experimental Botany. 60 (10), pp. 2817-2825. https://doi.org/10.1093/jxb/erp189

TILLING for improved crop performance under stress conditions

C1 - Edited contributions to conferences/learned societies

Parry, M. A. J., Madgwick, P. J., Bayon, C., Habash, D., Baudo, M., Tuberosa, R., Bort, J., Ben Haj Salah, H., Slafer, G., Al-Yassin, A., Ouabbou, H., Labihili, M., Natchit, M. and Phillips, A. L. 2008. TILLING for improved crop performance under stress conditions. Effects of Climate Change on Plants: Implications for Agriculture. Aspects of Applied Biology 88 . Association of Applied Biologists (AAB) Wellesbourne Warwick . pp. 111

Rust resistance of some varieties and recently bred genotypes of biomass willows

A - Papers appearing in refereed journals

Pei, M. H., Lindegaard, K., Ruiz, C. and Bayon, C. 2008. Rust resistance of some varieties and recently bred genotypes of biomass willows. Biomass & Bioenergy. 32, pp. 453-459. https://doi.org/10.1016/j.biombioe.2007.11.002

Triticum monococcum as a reference species for wheat genetics and genomics

C2 - Non-edited contributions to conferences

Jing, H-C., Bayon, C., Gutteridge, R., Kornyukhin, D., Kanyuka, K., Orford, S., Zlatska, A., Mitrofanova, O. P., Phillips, A. L. and Hammond-Kosack, K. E. 2007. Triticum monococcum as a reference species for wheat genetics and genomics. Abstracts 4th UK Small Grain Cereal Genetics and Genomics Workshop: From Genes to Traits, Cambridge, 14-16 March 2007 .

Genetic structure and spatial distribution of the mycoparasite Sphaerellopsis filum on Melampsora larici-epitea in a short-rotation coppice willow planting

A - Papers appearing in refereed journals

Bayon, C., Pei, M. H., Ruiz, C. and Hunter, T. 2007. Genetic structure and spatial distribution of the mycoparasite Sphaerellopsis filum on Melampsora larici-epitea in a short-rotation coppice willow planting. Plant Pathology. 56 (4), pp. 616-623. https://doi.org/10.1111/j.1365-3059.2007.01606.x

Fourteen rusts from northeast Iran

A - Papers appearing in refereed journals

Sadravi, M., Ono, Y., Pei, M. H. and Rahnama, K. 2007. Fourteen rusts from northeast Iran. Journal of Plant Pathology. 89, pp. 191-202.

Population structure of poplar rust Melampsora larici-populina in the UK inferred from AFLP

A - Papers appearing in refereed journals

Pei, M. H., Bayon, C., Ruiz, C. and Tubby, I. 2007. Population structure of poplar rust Melampsora larici-populina in the UK inferred from AFLP. Plant Pathology. 56 (3), pp. 472-479. https://doi.org/10.1111/j.1365-3059.2007.01570.x

Getting the most out of fluorescent amplified fragment length polymorphism

A - Papers appearing in refereed journals

Trybush, S., Hanley, S. J., Cho, K-H., Jahodova, S., Grimmer, M., Emelianov, I., Bayon, C. and Karp, A. 2006. Getting the most out of fluorescent amplified fragment length polymorphism. Canadian Journal Of Botany. 84 (8), pp. 1347-1354. https://doi.org/10.1139/B06-096

Phylogenetic relationships in some Melampsora rusts on Salicaceae assessed using rDNA sequence information

A - Papers appearing in refereed journals

Pei, M. H., Bayon, C. and Ruiz, C. 2005. Phylogenetic relationships in some Melampsora rusts on Salicaceae assessed using rDNA sequence information. Mycological Research. 109 (4), pp. 401-409. https://doi.org/10.1017/S0953756205002479

Phylogenetic position of Melampsora in rust fungi inferred from ribosomal DNA sequences

B - Book chapters etc edited externally

Bayon, C. and Ruiz, C. 2005. Phylogenetic position of Melampsora in rust fungi inferred from ribosomal DNA sequences. in: Pei, M. H. and Mccracken, A. R. (ed.) Rust diseases of willow and poplar CABI International, Wallingford, Oxon (CABI). pp. 1-9

A brief review of Melampsora rusts on Salix

B - Book chapters etc edited externally

Pei, M. H. 2005. A brief review of Melampsora rusts on Salix. in: Pei, M. H. and Mccracken, A. R. (ed.) Rust diseases of willow and poplar CABI International, Wallingford, Oxon (CABI). pp. 11-28

Rust diseases of willow and poplar

E - Books edited/written by staff member, alone/with others

Pei, M. H. Mccracken, A. R. (ed.) 2005. Rust diseases of willow and poplar. CABI International, Wallingford, Oxon (CABI).

Pathogenic variation in poplar rust Melampsora larici-populina from England

A - Papers appearing in refereed journals

Pei, M. H., Ruiz, C., Bayon, C., Hunter, T. and Lonsdale, D. 2005. Pathogenic variation in poplar rust Melampsora larici-populina from England. European Journal of Plant Pathology. 111, pp. 147-155.

Rust resistance in Salix to Melampsora larici-epitea

A - Papers appearing in refereed journals

Pei, M. H., Ruiz, C., Bayon, C. and Hunter, T. 2004. Rust resistance in Salix to Melampsora larici-epitea. Plant Pathology. 53 (6), pp. 770-779. https://doi.org/10.1111/j.1365-3059.2004.01100.x

Rust resistance in Salix induced by inoculations with avirulent and virulent isolates of Melampsora larici-epitea

A - Papers appearing in refereed journals

Pei, M. H., Ruiz, C., Hunter, T. and Bayon, C. 2003. Rust resistance in Salix induced by inoculations with avirulent and virulent isolates of Melampsora larici-epitea. Forest Pathology. 33 (6), pp. 383-394. https://doi.org/10.1046/j.1437-4781.2003.00338.x

Quantitative inoculations of poplars with Melampsora larici-populina

A - Papers appearing in refereed journals

Pei, M. H., Ruiz, C., Harris, J. and Hunter, T. 2003. Quantitative inoculations of poplars with Melampsora larici-populina. European Journal of Plant Pathology. 109, pp. 269-276.

Quantitative inoculation of willow rust Melampsora larici-epitea with the mycoparasite Sphaerellopsis filum (teleomorph Eudarluca caricis )

A - Papers appearing in refereed journals

Pei, M. H., Hunter, T., Ruiz, C., Bayon, C. and Harris, J. 2003. Quantitative inoculation of willow rust Melampsora larici-epitea with the mycoparasite Sphaerellopsis filum (teleomorph Eudarluca caricis ). Mycological Research. 107, pp. 57-63.

Quantitative relationships between inoculum of Melampsora larici-epitea and corresponding disease on Salix

A - Papers appearing in refereed journals

Pei, M. H., Ruiz, C., Hunter, T., Arnold, G. M. and Bayon, C. 2002. Quantitative relationships between inoculum of Melampsora larici-epitea and corresponding disease on Salix. Plant Pathology. 51, pp. 443-453.

Genetic variation in Melampsora larici-epitea on biomass willows assessed using AFLP

A - Papers appearing in refereed journals

Pei, M. H., Bayon, C., Ruiz, C., Yuan, Z-W. and Hunter, T. 2002. Genetic variation in Melampsora larici-epitea on biomass willows assessed using AFLP. European Journal of Plant Pathology. 108, pp. 229-236.

Preliminary studies of inheritance of rust resistance in biomass willows

C1 - Edited contributions to conferences/learned societies

Pei, M. H., Lindegaard, K. N., Hunter, T. and Ruiz, C. 2001. Preliminary studies of inheritance of rust resistance in biomass willows. Biomass and Energy Crops II. Aspects of Applied Biology 65 . pp. 281-288

Heterogeneous nature of a 'new' pathotype of Melampsora rust on Salix revealed by AFLP

A - Papers appearing in refereed journals

Pei, M. H., Yuan, Z-W., Hunter, T. and Ruiz, C. 2000. Heterogeneous nature of a 'new' pathotype of Melampsora rust on Salix revealed by AFLP. European Journal of Plant Pathology. 106, pp. 771-779.

Integrated control of willow rust in renewable energy plantations in the UK

G - Articles in popular magazines and other technical publications

Pei, M. H. and Hunter, T. 2000. Integrated control of willow rust in renewable energy plantations in the UK. Pesticide Outlook. 11, pp. 145-148.

AFLP evidence of the distinctive patterns of life-cycle in two forms of Melampsora rust on Salix viminalis

A - Papers appearing in refereed journals

Pei, M. H. and Ruiz, C. 2000. AFLP evidence of the distinctive patterns of life-cycle in two forms of Melampsora rust on Salix viminalis. Mycological Research. 104, pp. 937-942.

Technical Notes. Isolation and characterization of microsatellite loci in the wheat pathogen Mycosphaerella graminicola

A - Papers appearing in refereed journals

Owen, P. G., Pei, M. H., Karp, A., Royle, D. J. and Edwards, K. J. 1998. Technical Notes. Isolation and characterization of microsatellite loci in the wheat pathogen Mycosphaerella graminicola. Molecular Ecology. 7 (11), pp. 1611-1612. https://doi.org/10.1046/j.1365-294X.1998.00499.x

Inoculation of young pine seedlings with Peridermium pini from north-east Scotland

A - Papers appearing in refereed journals

Pei, M. H. and Brodie, J. 1995. Inoculation of young pine seedlings with Peridermium pini from north-east Scotland. EUROPEAN JOURNAL OF FOREST PATHOLOGY. 25 (1), pp. 24-30.