Genetics

Journal

TitleGenetics
ISSN0016-6731
PublisherGenetics Society of America (GSA)

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The Unified Phenotype Ontology : a framework for cross-species integrative phenomics

A - Papers appearing in refereed journals
Matentzoglu, N., Bello, S. M., Stefancsik, R., Alghamdi, S. M., Anagnostopoulos, A. V., Balhoff, J. P., Balk, M. A., Bradford, Y. M., Bridges, Y., Callahan, T. J., Caufield, H., Cuzick, A., Carmody, L. C., Caron, A. R., Souza, V. D., Engel, S. R., Fey, P., Fisher, M., Gehrke, S., Grove, C., Hansen, P., Harris, N. L., Harris, M. A., Harris, L., Ibrahim, A., Jacobsen, J. O., Kohler, S., McMurry, J. A., Munoz-Fuentes, V., Munoz-Torres, M. C., Parkinson, H., Pendlington, Z. M., Pilgrim, C., Robb, S. M., Robinson, P. N., Seager, J., Segerdell, E., Smedley, D., Sollis, E., Toro, S., Vasilevsky, N., Wood, V., Haendel, M. A., Mungall, C. J., McLaughlin, J. A. and Osumi-Sutherland, D. 2024. The Unified Phenotype Ontology : a framework for cross-species integrative phenomics. Genetics. 229 (3), p. iyaf027. https://doi.org/10.1093/genetics/iyaf027

The Gene Ontology knowledgebase in 2023

A - Papers appearing in refereed journals
Aleksander, S. A., Balhoff, J., Carbon, S., Cherry, J. M., Drabkin, H. J., Ebert, D., Feuermann, M., Gaudet, P., Harris, N. L., Hill, D. P., Lee, R., Mi, H., Moxon, S., Mungall, C. J., Muruganugan, A., Mushayahama, T., Sternberg, P. W., Thomas, P. D., Auken, K. V., Ramsey, J., Siegele, D. A., Chisholm, R. L., Fey, P., Aspromonte, M. C., Nugnes, M. V., Quaglia, F., Tosatto, S., Giglio, M., Nadendla, S., Antonazzo, G., Attrill, H., Santos, G. D., Marygold, S., Strelets, V., Tabone, C. J., Thurmond, J., Zhou, P., Ahmed, S. H., Asanitthong, P., Buitrago, D. L., Erdol, M. N., Gage, M. C., Kadhum, M. A., Li, K. Y. C., Long, M., Michalak, A., Pesala, A., Pritazahra, A., Saverimuttu, S. C. C., Su, R., Thurlow, K. E., Lovering, R. C., Logie, C., Oliferenko, S., Blake, J., Christie, K., Corbani, L., Dolan, M. E., Drabkin, H. J., Hill, D. P., Ni, L., Sitnikov, D., Smith, C., Cuzick, A., Seager, J., Cooper, L., Elser, J., Jaiswal, P., Gupta, P., Jaiswal, P., Naithani, S., Lera-Ramirez, M., Rutherford, K., Wood, V., Pons, J. L. D., Dwinell, M. R., Hayman, G. T., Kaldunski, M. L., Kwitek, A. E., Laulederkind, S. J. F., Tutaj, M. A., Vedi, M., Wang, S., D'Eustachio, P., Aimo, L., Axelsen, K., Bridge, A., Hyka-Nouspikel, N., Morgat, A., Aleksander, S. A., Cherry, J. M., Engel, S. R., Karra, K., Miyasato, S. R., Nash, R. S., Skrzypek, M. S., Weng, S., Wong, E. D., Bakker, E., Berardini, T. Z., Reiser, L., Auchincloss, A., Axelsen, K., Argoud-Puy, G., Blatter, M., Boutet, E., Breuza, L., Bridge, A., Casals-Casas, C., Coudert, E., Estreicher, A., Famiglietti, M. L., Feuermann, M., Gos, A., Gruaz-Gumowski, N., Hulo, C., Hyka-Nouspikel, N., Jungo, F., Mercier, P. L., Lieberherr, D., Masson, P., Morgat, A., Pedruzzi, I., Pourcel, L., Poux, S., Rivoire, C., Sundaram, S., Bateman, A., Bowler-Barnett, E., Bye-A-Jee, H., Denny, P., Ignatchenko, A., Ishtiaq, R., Lock, A., Lussi, Y., Magrane, M., Martin, M. J., Orchard, S., Raposo, P., Speretta, E., Tyagi, N., Warner, K., Zaru, R., Diehl, A. D., Lee, R., Chan, J., Diamantakis, S., Raciti, D., Zarowiecki, M., Fisher, M., James-Zorn, C., Ponferrada, V., Zorn, A., Ramachandran, S., Ruzicka, L., Westerfield, M. and Gene Ontology Consortium 2023. The Gene Ontology knowledgebase in 2023. Genetics. 244 (1), p. iyad031. https://doi.org/10.1093/genetics/iyad031

Tolerance to oxidative stress is associated with both oxidative stress response and inherent growth in a fungal wheat pathogen

A - Papers appearing in refereed journals
Zhong, Z., MacDonald, B. A. and Palma-Guerrero, J. 2021. Tolerance to oxidative stress is associated with both oxidative stress response and inherent growth in a fungal wheat pathogen . Genetics. 217 (2), p. iyaa022. https://doi.org/10.1093/genetics/iyaa022

Likelihood-free inference of population structure and local adaptation in a Bayesian hierarchical model

A - Papers appearing in refereed journals
Bazin, E., Dawson, K. J. and Beaumont, M. A. 2010. Likelihood-free inference of population structure and local adaptation in a Bayesian hierarchical model. Genetics. 185, pp. 587-602. https://doi.org/10.1534/genetics.109.112391

A and C genome distinction and chromosome identification in Brassica napus by sequential fluorescence in situ hybridization and genomic in situ hybridization

A - Papers appearing in refereed journals
Howell, E. C., Kearsey, M. J., Jones, G. H., King, G. J. and Armstrong, S. J. 2008. A and C genome distinction and chromosome identification in Brassica napus by sequential fluorescence in situ hybridization and genomic in situ hybridization. Genetics. 180, pp. 1849-1857. https://doi.org/10.1534/genetics.108.095893

Analysis of litter size and average litter weight in pigs using a recursive model

A - Papers appearing in refereed journals
Varona, L., Sorensen, D. and Thompson, R. 2007. Analysis of litter size and average litter weight in pigs using a recursive model. Genetics. 177 (3), pp. 1791-1799. https://doi.org/10.1534/genetics.107.077818

A sequence-tagged linkage map of Brassica rapa

A - Papers appearing in refereed journals
Kim, J. S., Chung, T. Y., King, G. J., Jin, M., Yang, T-J., Jin, Y-M., Kim, H-I. and Park, B-S. 2006. A sequence-tagged linkage map of Brassica rapa. Genetics. 174, pp. 29-39. https://doi.org/10.1534/genetics.106.060152

Multivariate character process models for the analysis of two or more correlated function-valued traits

A - Papers appearing in refereed journals
Jaffrezic, F., Thompson, R. and Pletcher, S. D. 2004. Multivariate character process models for the analysis of two or more correlated function-valued traits. Genetics. 168 (1), pp. 477-487. https://doi.org/10.1534/genetics.103.019554

Interpretation of variation across marker loci as evidence of selection

A - Papers appearing in refereed journals
Vitalis, R., Dawson, K. J. and Boursot, P. 2001. Interpretation of variation across marker loci as evidence of selection. Genetics. 158, pp. 1811-1823.

A simple sequence repeat-based linkage map of barley

A - Papers appearing in refereed journals
Ramsay, L., Macaulay, M., Degli Ivanissevich, S., Maclean, K., Cardle, L., Fuller, J., Edwards, K. J., Tuvesson, S., Morgante, M., Massari, A., Maestri, E., Marmiroli, N., Sjakste, T., Ganal, M., Powell, W. and Waugh, R. 2000. A simple sequence repeat-based linkage map of barley. Genetics. 156, pp. 1997-2005.

A population genetics model of marker-assisted selection

A - Papers appearing in refereed journals
Luo, Z. W., Thompson, R. and Woolliams, J. A. 1997. A population genetics model of marker-assisted selection. Genetics. 146 (3), pp. 1173-1183.

Confidence intervals in QTL mapping by bootstrapping

A - Papers appearing in refereed journals
Visscher, P. M., Thompson, R. and Haley, C. S. 1996. Confidence intervals in QTL mapping by bootstrapping. Genetics. 143 (2), pp. 1013-1020.

Marker-assisted introgression in backcross breeding programs

A - Papers appearing in refereed journals
Visscher, P. M., Haley, C. S. and Thompson, R. 1996. Marker-assisted introgression in backcross breeding programs. Genetics. 144 (4), pp. 1923-1932.

The genetical interpretation of statistics of the third degree in the study of quantitative inheritance

A - Papers appearing in refereed journals
Fisher, R. A., Immer, F. R. and Tedin, O. 1932. The genetical interpretation of statistics of the third degree in the study of quantitative inheritance. Genetics. 17 (2), pp. 107-124.

The application of the Method of Maximum Likelihood to the estimation of linkage

A - Papers appearing in refereed journals
Hutchinson, J. B. 1929. The application of the Method of Maximum Likelihood to the estimation of linkage. Genetics. 14 (6), pp. 519-537.

The resemblance between twins, a statistical examination of Lauterbach's measurements

A - Papers appearing in refereed journals
Fisher, R. A. 1925. The resemblance between twins, a statistical examination of Lauterbach's measurements. Genetics. 10 (6), pp. 569-579.