PLOS ONE

Journal

TitlePLOS ONE
ISSN1932-6203
PublisherPublic Library of Science (PLOS)
Web address (URL)http://journals.plos.org/plosone/s/journal-information

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Genome-wide association mapping of grain yield in a diverse collection of spring wheat (Triticum aestivum L.) evaluated in southern Australia

A - Papers appearing in refereed journals
Garcia, M., Eckermann, P., Haefele, S. M., Satija, S., Sznaidjer, B., Timmins, A., Baumann, U., Wolters, P., Mather, D .E. and Fleury, D. 2019. Genome-wide association mapping of grain yield in a diverse collection of spring wheat (Triticum aestivum L.) evaluated in southern Australia. PLOS ONE. 14 (2), p. e0211730.

Fertilizer produced from abattoir waste can contribute to phosphorus sustainability, and biofortify crops with minerals

A - Papers appearing in refereed journals
Darch, T., Dunn, R. M., Guy, A., Hawkins, J. M. B., Ash, M., Frimpong, K. A. and Blackwell, M. S. A. 2019. Fertilizer produced from abattoir waste can contribute to phosphorus sustainability, and biofortify crops with minerals. PLOS ONE. 14 (9), p. e0221647.

Drought stress affects the protein and dietary fiber content of wholemeal wheat flour in wheat/Aegilops addition lines

A - Papers appearing in refereed journals
Rakszegi, M., Darkó, E., Lovegrove, A., Molnár, M., Lang, L., Bedő, Z, Molnár-Láng, M. and Shewry, P. R. 2019. Drought stress affects the protein and dietary fiber content of wholemeal wheat flour in wheat/Aegilops addition lines. PLOS ONE. 14 (2), p. e0211892.

Soil health pilot study in England: outcomes from an on-farm earthworm survey

A - Papers appearing in refereed journals
Stroud, J. L. 2019. Soil health pilot study in England: outcomes from an on-farm earthworm survey. PLOS ONE. 14 (2), p. e0203909.

Transcriptional response of rice flag leaves to restricted external phosphorus supply during grain filling in rice cv IR64

A - Papers appearing in refereed journals
Jeong, K., Pantoja, O., Baten, A., Waters, D., Kretzschmar, T., Wissuwa, M., Juila, C. C., Heuer, S. and Rose, T. J. 2018. Transcriptional response of rice flag leaves to restricted external phosphorus supply during grain filling in rice cv IR64. PLOS ONE. 13 (9), p. e0203654.

Host shift induces changes in mate choice of the seed predator Acanthoscelides obtectus via altered chemical signalling

A - Papers appearing in refereed journals
Vuts, J., Woodcock, C. M., Koenig, L., Powers, S. J., Pickett, J. A., Szentesi, A. and Birkett, M. A. 2018. Host shift induces changes in mate choice of the seed predator Acanthoscelides obtectus via altered chemical signalling. PLOS ONE. 13 (11), p. e0206144.

Environmentally vulnerable noble chafers exhibit unusual pheromone-mediated behaviour

A - Papers appearing in refereed journals
Harvey, D. J., Vuts, J., Hooper, A. M., Finch, P., Woodcock, C. M., Caulfield, J. C., Kadej, M., Smolis, A., Withall, D., Henshall, S., Pickett, J. A. and Birkett, M. A. 2018. Environmentally vulnerable noble chafers exhibit unusual pheromone-mediated behaviour. PLOS ONE. 13 (11), p. e0206526.

Levy foraging patterns of rural humans

A - Papers appearing in refereed journals
Reynolds, A. M., Ceccon, E., Baldauf, C., Medeiros, T. K. and Miramontes, O. 2018. Levy foraging patterns of rural humans. PLOS ONE. 13 (6), p. e0199099.

Formation of large viroplasms and virulence of Cauliflower mosaic virus in turnip plants depend on the N-terminal EKI sequence of viral protein TAV

A - Papers appearing in refereed journals
Geldreich, A., Haas, G., Kubina, J., Bouton, C., Tanguy, M., Erhardt, M., Keller, M., Ryabova, L. and Dimitrova, M. 2017. Formation of large viroplasms and virulence of Cauliflower mosaic virus in turnip plants depend on the N-terminal EKI sequence of viral protein TAV. PLOS ONE. 12 (12), p. e0189062.

An oil containing EPA and DHA from transgenic Camelina sativa to replace marine fish oil in feeds for Atlantic salmon (Salmo salar L.): Effects on intestinal transcriptome, histology, tissue fatty acid profiles and plasma biochemistry

A - Papers appearing in refereed journals
Betancor, M. B., Li, K., Sprague, M., Bardal, T., Sayanova, O. V., Usher, S., Han, L., Måsøval, K., Torrissen, O., Napier, J. A., Tocher, D. R. and Olsen, R. E. 2017. An oil containing EPA and DHA from transgenic Camelina sativa to replace marine fish oil in feeds for Atlantic salmon (Salmo salar L.): Effects on intestinal transcriptome, histology, tissue fatty acid profiles and plasma biochemistry. PLOS ONE. 12 (4), p. e0175415.

Soil texture analysis revisited: Removal of organic matter matters more than ever

A - Papers appearing in refereed journals
Jensen, J. L., Schjonning, P., Watts, C. W., Christensen, B. T. and Munkholm, L. J. 2017. Soil texture analysis revisited: Removal of organic matter matters more than ever. PLOS ONE. 12 (5), p. 10p.

Arthropod pest control for UK oilseed rape – comparing insecticide efficacies, side effects and alternatives

A - Papers appearing in refereed journals
Zhang, Han, Breeze, T., Bailey, A., Garthwaite, D. G., Harrington, R. and Potts, S. G. 2017. Arthropod pest control for UK oilseed rape – comparing insecticide efficacies, side effects and alternatives. PLOS ONE. 12 (1), p. e0169475.

Characterization of cereal β-glucan extracts from oat and barley and quantification of proteinaceous matter

A - Papers appearing in refereed journals
Zielke, C., Kosik, O., Ainalem, M. L., Lovegrove, A., Stradner, A. and Nilsson, L. 2017. Characterization of cereal β-glucan extracts from oat and barley and quantification of proteinaceous matter. PLOS ONE. 12 (2), p. e0172034.

Identification and expression profile analysis of odorant binding protein and chemosensory protein genes in Bemisia tabaci MED by head transcriptome

A - Papers appearing in refereed journals
Wang, R., Li, F., Zhang, W., Zhang, X., Qu, C., Tetreau, G., Sun, L., Luo, C. and Zhou, J. 2017. Identification and expression profile analysis of odorant binding protein and chemosensory protein genes in Bemisia tabaci MED by head transcriptome. PLOS ONE. (e0171739), p. 19pp.

Remobilisation of phosphorus fractions in rice flag leaves during grain filling: Implications for photosynthesis and grain yields

A - Papers appearing in refereed journals
Jeong, K., Julia, C. C., Water, D. L. E., Pantoja, O., Wissuwa, M., Heuer, S., Liu, L. and Rose, T. J. 2017. Remobilisation of phosphorus fractions in rice flag leaves during grain filling: Implications for photosynthesis and grain yields. PLOS ONE. 12 (11), p. e0187521.

The role of microbial community composition in controlling soil respiration responses to temperature

A - Papers appearing in refereed journals
Auffret, M. D., Karhu, K., Khachane, A., Dungait, J. A. J., Fraser, F., Hopkins, D. W., Wookey, P. A., Singh, B. K., Freitag, T. E., Hartley, I. P. and Prosser, J. I. 2016. The role of microbial community composition in controlling soil respiration responses to temperature. PLOS ONE. 11 (10).

Agricultural Management and Climatic Change Are the Major Drivers of Biodiversity Change in the UK

A - Papers appearing in refereed journals
Burns, F., Eaton, M. A., Barlow, K. E., Beckmann, B. C., Brereton, T., Brooks, D. R., Brown, P. M. J., Al Fulaij, N., Gent, T., Henderson, I., Noble, D. G., Parsons, M., Powney, G. D., Roy, H. E., Stroh, P., Walker, K., Wilkinson, J. W., Wotton, S. R. and Gregory, R. D. 2016. Agricultural Management and Climatic Change Are the Major Drivers of Biodiversity Change in the UK. PLOS ONE. 11 (3).

Novel mutations in the voltage-gated sodium channel of pyrethroid-resistant Varroa destructor populations from the Southeastern USA

A - Papers appearing in refereed journals
Gonzalez-Cabrera, J., Rodriguez-Vargas, S., Davies, T. G. E., Field, L. M., Schmehl, D., Ellis, J. D., Krieger, K. and Williamson, M. S. 2016. Novel mutations in the voltage-gated sodium channel of pyrethroid-resistant Varroa destructor populations from the Southeastern USA. PLOS ONE. 11 (5).

An Indirect Defence Trait Mediated through Egg-Induced Maize Volatiles from Neighbouring Plants

A - Papers appearing in refereed journals
Mutyambai, D. M., Bruce, T. J. A., Van Den Berg, J., Midega, C. A. O., Pickett, J. A. and Khan, Z. R. 2016. An Indirect Defence Trait Mediated through Egg-Induced Maize Volatiles from Neighbouring Plants. PLOS ONE. 11 (7).

Nutritional Evaluation of an EPA-DHA Oil from Transgenic Camelina sativa in Feeds for Post-Smolt Atlantic Salmon (Salmo salar L.)

A - Papers appearing in refereed journals
Betancor, M. B., Sprague, M., Sayanova, O. V., Usher, S., Metochis, C., Campbell, P. J., Napier, J. A. and Tocher, D. R. 2016. Nutritional Evaluation of an EPA-DHA Oil from Transgenic Camelina sativa in Feeds for Post-Smolt Atlantic Salmon (Salmo salar L.). PLOS ONE. 11 (7).

Life-long radar tracking of bumblebees

A - Papers appearing in refereed journals
Woodgate, J. L., Makinson, J. C., Lim, K. S., Reynolds, A. M. and Chittka, L. 2016. Life-long radar tracking of bumblebees. PLOS ONE. 11 (8).

Dual Fatty Acid Elongase Complex Interactions in Arabidopsis

A - Papers appearing in refereed journals
Morineau, C., Gissot, L., Bellec, Y., Hematy, K., Tellier, F., Renne, C., Haslam, R. P., Beaudoin, F., Napier, J. A. and Faure, J. D. 2016. Dual Fatty Acid Elongase Complex Interactions in Arabidopsis. PLOS ONE. 11 (9), p. 20.

Metabolome analysis reveals betaine lipids as major source for triglyceride formation, and the accumulation of sedoheptulose during nitrogen-starvation of Phaeodactylum tricornutum

A - Papers appearing in refereed journals
Popko, J., Herrfurth, C., Feussner, K., Ischebeck, T., Iven, T., Haslam, R. P., Hamilton, M. L., Sayanova, O. V., Napier, J. A., Khozin-Goldberg, I. and Feussner, I. 2016. Metabolome analysis reveals betaine lipids as major source for triglyceride formation, and the accumulation of sedoheptulose during nitrogen-starvation of Phaeodactylum tricornutum. PLOS ONE. 11 (10), p. e0164674.

The evolution of fungicide resistance resulting from combinations of foliar-acting systemic seed treatments and foliar-applied fungicides: a modeling analysis

A - Papers appearing in refereed journals
Kitchen, J. L., Van Den Bosch, F., Paveley, N. D., Helps, J. and Van Den Berg, F. 2016. The evolution of fungicide resistance resulting from combinations of foliar-acting systemic seed treatments and foliar-applied fungicides: a modeling analysis. PLOS ONE. 11 (8), p. e0161887.

Exploiting Co-Benefits of Increased Rice Production and Reduced Greenhouse Gas Emission through Optimized Crop and Soil Management

A - Papers appearing in refereed journals
An, N., Fan, M., Zhang, F., Christie, P., Yang, J., Huang, J., Guo, S., Shi, X., Tang, Q., Peng, J., Zhong, X., Sun, Y., Lv, S., Jiang, R. and Dobermann, A. 2015. Exploiting Co-Benefits of Increased Rice Production and Reduced Greenhouse Gas Emission through Optimized Crop and Soil Management. PLOS ONE. 10 (10), p. e0140023.

Organic farming: biodiversity impacts can depend on dispersal characteristics and landscape context

A - Papers appearing in refereed journals
Feber, R., E., Johnson, PJ., Bell, J. R., Chamberlain, D. E., Firbank, L. G., Fuller, R. J., Manley, W., Mathews, F., Norton, L. R., Townsend, M. and Macdonald, D. W. 2015. Organic farming: biodiversity impacts can depend on dispersal characteristics and landscape context. PLOS ONE. 10 (8), p. e0135921.

Towards the industrial production of omega-3 long chain polyunsaturated fatty acids from a genetically modified diatom Phaeodactylum tricornutum

A - Papers appearing in refereed journals
Hamilton, M. L., Warwick, J., Terry, A., Allen, M. J., Napier, J. A. and Sayanova, O. V. 2015. Towards the industrial production of omega-3 long chain polyunsaturated fatty acids from a genetically modified diatom Phaeodactylum tricornutum. PLOS ONE. 10, p. e0144054.

Incidence, spread and mechanisms of pyrethroid resistance in European populations of the cabbage stem flea beetle, Psylliodes chrysocephala L. (Coleoptera: Chrysomelidae)

A - Papers appearing in refereed journals
Hojland, D. H., Nauen, R., Foster, S. P., Williamson, M. S. and Kristensen, M. 2015. Incidence, spread and mechanisms of pyrethroid resistance in European populations of the cabbage stem flea beetle, Psylliodes chrysocephala L. (Coleoptera: Chrysomelidae). PLOS ONE. 10, p. e0146045.

The Aspergillus fumigatus pkcA G579R mutant is defective in the activation of the cell wall integrity pathway but is dispensable for virulence in a neutropenic mouse infection model

A - Papers appearing in refereed journals
Rocha, M. C., De Godoy, K. F., De Castro, P. A., Hori, J. I., Bom, V. L. P., Brown, N. A., Da Cunha, A. F., Goldman, G. H. and Malavazi, I. 2015. The Aspergillus fumigatus pkcA G579R mutant is defective in the activation of the cell wall integrity pathway but is dispensable for virulence in a neutropenic mouse infection model. PLOS ONE. 10, p. e0135195.

Mutation scanning in wheat by exon capture and next-generation sequencing

A - Papers appearing in refereed journals
King, R., Bird, N., Ramirez-Gonzalez, R., Coghill, J. A., Patil, A., Hassani-Pak, K., Uauy, C. and Phillips, A. L. 2015. Mutation scanning in wheat by exon capture and next-generation sequencing. PLOS ONE. 10, p. e0137549.

Effects of manipulated above- and belowground organic input on soil respiration in a Chinese pine plantation

A - Papers appearing in refereed journals
Fan, J., Wang, J., Zhao, B., Wu, L., Zhang, C., Zhao, X. and Gadow, K. V. 2015. Effects of manipulated above- and belowground organic input on soil respiration in a Chinese pine plantation. PLOS ONE. 10, p. e126337.

TaER expression is associated with transpiration efficiency traits and yield in bread wheat

A - Papers appearing in refereed journals
Zheng, J., Yang, Z., Madgwick, P. J., Carmo-Silva, E., Parry, M. A. J. and Hu, Y-G. 2015. TaER expression is associated with transpiration efficiency traits and yield in bread wheat. PLOS ONE. 10, p. e0128415.

An interspecies comparative analysis of the predicted secretomes of the necrotrophic plant pathogens Sclerotinia sclerotiorum and Botrytis cinerea

A - Papers appearing in refereed journals
Heard, S., Brown, N. A. and Hammond-Kosack, K. E. 2015. An interspecies comparative analysis of the predicted secretomes of the necrotrophic plant pathogens Sclerotinia sclerotiorum and Botrytis cinerea. PLOS ONE. 10, p. e0130534.

Heritability of attractiveness to mosquitoes

A - Papers appearing in refereed journals
Fernandez-Grandon, G. M., Gezan, S. A., Armour, J. A. L., Pickett, J. A. and Logan, J. G. 2015. Heritability of attractiveness to mosquitoes. PLOS ONE. 10, p. e0122716.

Detection of powdery mildew in two winter wheat plant densities and prediction of grain yield using canopy hyperspectral reflectance

A - Papers appearing in refereed journals
Cao, X., Luo, Y., Zhou, Y., Fan, J., Xu, X., West, J. S., Duan, X. and Cheng, D. 2015. Detection of powdery mildew in two winter wheat plant densities and prediction of grain yield using canopy hyperspectral reflectance. PLOS ONE. 10, p. e0121462.

Plant virus particles carrying tumour antigen activate TLR7 and induce high levels of protective antibody

A - Papers appearing in refereed journals
Jobsri, J., Allen, A., Rajagopal, D., Shipton, M., Kanyuka, K., Lomonossoff, G. P., Ottensmeier, C., Diebold, S. S., Stevenson, F. K. and Savelyeva, N. 2015. Plant virus particles carrying tumour antigen activate TLR7 and induce high levels of protective antibody. PLOS ONE. 10, p. e0118096.

Transcriptome analysis of Arabidopsis GCR1 mutant reveals its roles in stress, hormones, secondary metabolism and phosphate starvation

A - Papers appearing in refereed journals
Chakraborty, N., Sharma, P., Kanyuka, K., Pathak, R. R., Choudhury, D., Hooley, R. A. and Raghuram, N. 2015. Transcriptome analysis of Arabidopsis GCR1 mutant reveals its roles in stress, hormones, secondary metabolism and phosphate starvation. PLOS ONE. 10, p. e0117819.

Cereal Aphid Colony Turnover and Persistence in Winter Wheat

A - Papers appearing in refereed journals
Winder, L., Alexander, C. J., Woolley, C., Perry, J. N. and Holland, J. M. 2014. Cereal Aphid Colony Turnover and Persistence in Winter Wheat. PLOS ONE. 9 (9).

Traditional vs modern: role of breed type in determining enteric methane emissions from cattle grazing as part of contrasting grassland-based systems

A - Papers appearing in refereed journals
Fraser, M. D., Fleming, H. R. and Moorby, J. M. 2014. Traditional vs modern: role of breed type in determining enteric methane emissions from cattle grazing as part of contrasting grassland-based systems. PLOS ONE. 9, p. e107861.

Plant volatile analogues strengthen attractiveness to insect

A - Papers appearing in refereed journals
Sun, Y., Yu, H., Zhou, J-J., Pickett, J. A. and Wu, K-M. 2014. Plant volatile analogues strengthen attractiveness to insect. PLOS ONE. 9, p. e99142.