DFW - Designing Future Wheat - Work package 1 (WP1) - Increased efficiency and sustainability

Repository project

Project dates01 Apr 2017 to end of 31 Mar 2022
Researchers
Principal InvestigatorMalcolm Hawkesford
FunderBiotechnology and Biological Sciences Research Council
Project numberI0220
DepartmentPlant Sciences
Research fish codeBBS/E/C/000I0220
Grant IDBBS/E/C/000I0220

Outputs

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Hidden variation in polyploid wheat drives local adaptation

A - Papers appearing in refereed journals
Gardiner, L.-J., Joynson, R., Omony, J., Rusholme-Pilcher, R., Olohan, L., Lang, D., Bai, C., Hawkesford, M. J., Salt, D., Spannagl, M., Mayer, K. F. X., Kenny, J., Bevan, M., Hall, N. and Hall, A. 2018. Hidden variation in polyploid wheat drives local adaptation. Genome Research. 28, pp. 1-14. https://doi.org/10.1101/gr.233551.117

Improved Interpretation of Mercury Intrusion and Soil Water Retention Percolation Characteristics by Inverse Modelling and Void Cluster Analysis

A - Papers appearing in refereed journals
Matthews, G. P., Levy, C. L., Laudone, G. M., Jones, K. L., Ridgway, C. J., Hallin, I. L., Gazze, S. A., Francis, L., Whalley, W. R., Schoelkopf, J. and Gane, P. A. C. 2018. Improved Interpretation of Mercury Intrusion and Soil Water Retention Percolation Characteristics by Inverse Modelling and Void Cluster Analysis. Transport In Porous Media. https://doi.org/10.1007/s11242-018-1087-1

Dissecting Wheat Grain Yield Drivers in a Mapping Population in the UK

A - Papers appearing in refereed journals
Pennacchi, J. P., Carmo-Silva, E., Andralojc, P. J., Feuerhelm, D,, Powers, S. J. and Parry, M. A. J. 2018. Dissecting Wheat Grain Yield Drivers in a Mapping Population in the UK. Agronomy. 8 (6), p. 94. https://doi.org/10.3390/agronomy8060094

Temperature and nitrogen supply interact to determine protein distribution gradients in the wheat grain endosperm

A - Papers appearing in refereed journals
Savill, G. P., Michalski, A., Powers, S. J., Wan, Y., Tosi, P., Buchner, P. H. and Hawkesford, M. J. 2018. Temperature and nitrogen supply interact to determine protein distribution gradients in the wheat grain endosperm. Journal of Experimental Botany. 69 (12), pp. 3117-3126. https://doi.org/10.1093/jxb/ery127

Reference gene selection for quantitative RT-PCR normalisation in barley under low nitrogen

A - Papers appearing in refereed journals
Chen, Z., Li, Y., Liu, C., Wang, Y., He, T., Guo, G., Fang, C., Gao, R., Xu, H., Zhou, L., Huang, J., Halford, N. G. and Lu, R. 2018. Reference gene selection for quantitative RT-PCR normalisation in barley under low nitrogen. Journal of Cereal Science. 82 (July), pp. 213-215. https://doi.org/10.1016/j.jcs.2018.06.014

Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate

A - Papers appearing in refereed journals
Giri, J., Bhosale, R., Huang, G., Pandey, B. K., Parker, H., Zappala, S., Yang, J., Dievart, A., Bureau, C., Ljung, K., Price, A., Rose, T., Larrieu, A., Mairhofer, S., Sturrock, C. J., White, P., Dupuy, L., Hawkesford, M. J., Perin, C., Liang, W., Peret, B., Hodgman, C. T., Lynch, J., Wissuwa, M., Zhang, D., Pridmore, T., Mooney, S. J., Guiderdoni, E., Swarup, R. and Bennett, M. J. 2018. Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate. Nature Communications. 9, p. 1408. https://doi.org/10.1038/s41467-018-03850-4

The Role of Trehalose 6-Phosphate in Crop Yield and Resilience

A - Papers appearing in refereed journals
Paul, M. J., Gonzalez-Uriarte, A., Griffiths, C. A. and Hassani-Pak, K. 2018. The Role of Trehalose 6-Phosphate in Crop Yield and Resilience. Plant Physiology. 177, pp. 12-23. https://doi.org/10.1104/pp.17.01634

Allelic variants of OsSUB1A cause differential expression of transcription factor genes in response to submergence in rice

A - Papers appearing in refereed journals
Sharma, N., Tang, T. M., Singh, N., Ruzicic, S., Mueller-Roeber, B., Baumann, U. and Heuer, S. 2018. Allelic variants of OsSUB1A cause differential expression of transcription factor genes in response to submergence in rice. Rice. 11 (2). https://doi.org/10.1186/s12284-017-0192-z

Trehalose 6-phosphate regulates photosynthesis and assimilate partitioning in reproductive tissue

A - Papers appearing in refereed journals
Paul, M. J., Oszvald, M., Primavesi, L. F. and Griffiths, C. A. 2018. Trehalose 6-phosphate regulates photosynthesis and assimilate partitioning in reproductive tissue. Plant Physiology. 176 (2). https://doi.org/10.1104/pp.17.01673

Where are the drought tolerant crops? An assessment of more than two decades of plant biotechnology effort in crop improvement

A - Papers appearing in refereed journals
Nuccio, M. L., Paul, M. J., Bate, N. J., Cohn, J. and Cutler, S. R. 2018. Where are the drought tolerant crops? An assessment of more than two decades of plant biotechnology effort in crop improvement. Plant Science. 273 (August), pp. 110-119. https://doi.org/10.1016/j.plantsci.2018.01.020

Are GM Crops for Yield and Resilience Possible?

A - Papers appearing in refereed journals
Paul, M. J., Nuccio, M. L. and Basu, S. S. 2018. Are GM Crops for Yield and Resilience Possible? Trends in Plant Science. 23 (1), pp. 10-16. https://doi.org/10.1016/j.tplants.2017.09.007

The effect of microbial activity on soil water diffusivity

A - Papers appearing in refereed journals
Choudhury, B. U., Ferraris, S., Ashton, R. W., Powlson, D. S. and Whalley, W. R. 2018. The effect of microbial activity on soil water diffusivity. European Journal of Soil Science. 69 (3), pp. 407-413. https://doi.org/10.1111/ejss.12535

Modelling daily to seasonal carbon fluxes and annual net ecosystem carbon balance of cereal grain-cropland using DailyDayCent: A model data comparison

A - Papers appearing in refereed journals
Senapati, N., Chabbi, A. and Smith, P. 2018. Modelling daily to seasonal carbon fluxes and annual net ecosystem carbon balance of cereal grain-cropland using DailyDayCent: A model data comparison. Agriculture, Ecosystems & Environment. 252, pp. 159-177. https://doi.org/10.1016/j.agee.2017.10.003

Genomic, biochemical and modelling analyses of asparagine synthetases from wheat

A - Papers appearing in refereed journals
Xu, H., Curtis, T. Y., Powers, S. J., Raffan, S., Gao, R., Huang, J., Heiner, M., Gilbert, D. R. and Halford, N. G. 2018. Genomic, biochemical and modelling analyses of asparagine synthetases from wheat. Frontiers in Plant Science. 8, p. 2237. https://doi.org/10.3389/fpls.2017.02237

Identification and expression profiling of Pht1 phosphate transporters in wheat in controlled environments and in the field

A - Papers appearing in refereed journals
Gruen, A., Buchner, P. H., Broadley, M. R. and Hawkesford, M. J. 2018. Identification and expression profiling of Pht1 phosphate transporters in wheat in controlled environments and in the field. Plant Biology. 20 (2), pp. 374-389. https://doi.org/10.1111/plb.12668

Shaping an Optimal Soil by Root–Soil Interaction

A - Papers appearing in refereed journals
Jin, K., White, P. J., Whalley, W. R., Shen, J. and Shi, L. 2017. Shaping an Optimal Soil by Root–Soil Interaction. Trends in Plant Science. 22 (10), pp. 823-829. https://doi.org/10.1016/j.tplants.2017.07.008

Targeting carbon for crop yield and drought resilience

A - Papers appearing in refereed journals
Griffiths, C. A. and Paul, M. J. 2017. Targeting carbon for crop yield and drought resilience. Journal of the Science of Food and Agriculture. 97 (14), pp. 4663-4671. https://doi.org/10.1002/jsfa.8501

Spatiotemporal expression patterns of wheat amino acid transporters reveal their putative roles in nitrogen transport and responses to abiotic stress

A - Papers appearing in refereed journals
Wan, Y., King, R., Mitchell, R. A. C., Hassani-Pak, K. and Hawkesford, M. J. 2017. Spatiotemporal expression patterns of wheat amino acid transporters reveal their putative roles in nitrogen transport and responses to abiotic stress. Scientific Reports. 7 (1), p. 5461. https://doi.org/10.1038/s41598-017-04473-3

Exogenous trehalose improves growth under limiting nitrogen through upregulation of nitrogen metabolism

A - Papers appearing in refereed journals
Paul, M. J., Lin, Y., Zhang, J., Chen, Y., Li, H., Lawlor, D. W. and Pan, W. 2017. Exogenous trehalose improves growth under limiting nitrogen through upregulation of nitrogen metabolism . BMC Plant Biology. 17, p. 247. https://doi.org/10.1186/s12870-017-1207-z

The role of ZIP transporters and group F bZIP transcription factors in the Zn-deficiency response of wheat (Triticum aestivum).

A - Papers appearing in refereed journals
Evens, N. P., Buchner, P. H., Williams, L. E. and Hawkesford, M. J. 2017. The role of ZIP transporters and group F bZIP transcription factors in the Zn-deficiency response of wheat (Triticum aestivum). The Plant Journal. 92 (2), pp. 291-304. https://doi.org/10.1111/tpj.13655

Remobilisation of phosphorus fractions in rice flag leaves during grain filling: Implications for photosynthesis and grain yields

A - Papers appearing in refereed journals
Jeong, K., Julia, C. C., Water, D. L. E., Pantoja, O., Wissuwa, M., Heuer, S., Liu, L. and Rose, T. J. 2017. Remobilisation of phosphorus fractions in rice flag leaves during grain filling: Implications for photosynthesis and grain yields. PLOS ONE. 12 (11), p. e0187521. https://doi.org/10.1371/journal.pone.0187521

Physical robustness of canopy temperature models for crop heat stress simulation across environments and production conditions

A - Papers appearing in refereed journals
Webber, H., White, J. W., Kimball, B. A., Ewert, F., Asseng, S., Rezaei, E. E., Pinter, P. J., Hatfield, J., Reynolds, M. P., Ababaei, B., Bindi, M, Doltra, J., Ferrise, R., Kage, Henning, Kassie, B.T., Kersebaum, K.-C., Luig, A., Olesen, J. E., Semenov, M. A., Stratonovitch, P., Ratjen, A. M., LaMorte, R. L., Leavitt, S. W., Hunsaker, D. J., Wall, G. W. and Martre, P. 2017. Physical robustness of canopy temperature models for crop heat stress simulation across environments and production conditions. Field Crops Research. 216, pp. 75-88. https://doi.org/10.1016/j.fcr.2017.11.005

How does inter-annual variability of attainable yield affect the magnitude of yield gaps for wheat and maize? An analysis at ten sites

A - Papers appearing in refereed journals
Hoffmann, M. P., Haakana, M., Asseng, S., Hohn, J. G., Palosuo, T., Ruiz-Ramos, M., Fronzek, S., Ewert, F., Gaiser, T., Kassie, B. T., Paff, K., Razaei, E. E., Rodriguez, A., Semenov, M. A., Srivastava, A. K., Stratonovitch, P., Tao, F., Chen, Y. and Rotter, R. P. 2017. How does inter-annual variability of attainable yield affect the magnitude of yield gaps for wheat and maize? An analysis at ten sites. Agricultural Systems. 159, pp. 199-208. https://doi.org/10.1016/j.agsy.2017.03.012

Characterization of the wheat leaf metabolome during grain filling and under varied N-supply

A - Papers appearing in refereed journals
Heyneke, E., Watanabe, M., Erban, A, Duan, G, Buchner, P. H., Walther, D., Kopka, J, Hawkesford, M. J. and Hoefgen, R. 2017. Characterization of the wheat leaf metabolome during grain filling and under varied N-supply. Frontiers in Plant Science. 8 (2048), pp. 1-18. https://doi.org/10.3389/fpls.2017.02048

Multi-feature machine learning model for automatic segmentation of green fractional vegetation cover for high-throughput field phenotyping

A - Papers appearing in refereed journals
Sadeghi-Tehran, P., Virlet, N., Sabermanesh, K. and Hawkesford, M. J. 2017. Multi-feature machine learning model for automatic segmentation of green fractional vegetation cover for high-throughput field phenotyping. Plant Methods. 13 (103), pp. 1-16. https://doi.org/10.1186/s13007-017-0253-8