S2N - Soil to Nutrition - Work package 3 (WP3) - Sustainable intensification - optimisation at multiple scales

Repository project

Project dates01 Apr 2017 to end of 31 Mar 2022
Researchers
Principal InvestigatorMichael Lee
Co-InvestigatorAdrian Collins
FunderBiotechnology and Biological Sciences Research Council
Project numberI0330
DepartmentSustainable Agriculture Sciences North Wyke
Research fish codeBBS/E/C/000I0330
Grant IDBBS/E/C/000I0330

Outputs

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Dry cropland changes in China's Three Gorges Reservoir Region during the period 1990 to 2015

A - Papers appearing in refereed journals
Wang, M., Tian, F., He, X., Anjum, R., Bao, Y. and Collins, A. L. 2020. Dry cropland changes in China's Three Gorges Reservoir Region during the period 1990 to 2015. Journal of Mountain Science. 17, pp. 516-527.

Sensitivity of source apportionment predicted by a Bayesian tracer mixing model to the inclusion of a sediment connectivity index as an informative prior: Illustration using the Kharka catchment (Nepal)

A - Papers appearing in refereed journals
Upadhayay, H. R., Lamichhane, S., Bajracharya, R. M., Cornelis, W., Collins, A. L. and Boeckx, P. 2020. Sensitivity of source apportionment predicted by a Bayesian tracer mixing model to the inclusion of a sediment connectivity index as an informative prior: Illustration using the Kharka catchment (Nepal). Science of the Total Environment. 713, p. 136703.

Optimizing farmyard manure and cattle slurry applications for intensively managed grasslands based on UK-DNDC model simulations

A - Papers appearing in refereed journals
Shah, S. H. H., Li, Y., Wang, J. and Collins, A. L. 2020. Optimizing farmyard manure and cattle slurry applications for intensively managed grasslands based on UK-DNDC model simulations. Science of the Total Environment. 714, p. 136672.

Spatial mapping of the provenance of storm dust: Application of data mining and ensemble modelling

A - Papers appearing in refereed journals
Gholami, G., Mohamadifar, A. and Collins, A. L. 2020. Spatial mapping of the provenance of storm dust: Application of data mining and ensemble modelling. Atmospheric Research. 233 (104716).

The impact of metal-rich sediments derived from mining on freshwater stream life

B - Book chapters etc edited externally
Jones, I. J., Murphy, J. F., Collins, A. L., Spencer, K. L., Rainbow, P. S., Arnold, A., Pretty, J. L., Moorhouse A. M. L., Aguilera, V., Edwards, P., Parsonage, F., Potter, H. and Whitehouse, P. 2020. The impact of metal-rich sediments derived from mining on freshwater stream life. in: De Voogt, P. (ed.) Reviews of Environmental Contamination and Toxicology Volume 248. Reviews of Environmental Contamination and Toxicology (Continuation of Residue Reviews) Springer. pp. 111-189

Changes of oxygen isotope values of soil P pools associated with changes in soil pH

A - Papers appearing in refereed journals
Pfahler, V., Macdonald, A. J., Mead, A., Smith, A. C., Tamburini, F., Blackwell, M. S. A. and Granger, S. J. 2020. Changes of oxygen isotope values of soil P pools associated with changes in soil pH. Scientific Reports. 10 (2065).

What makes or breaks an effective disease control campaign?

A - Papers appearing in refereed journals
Milne, A., Gottwald, T., Parnell, S. R., Alonso Chavez, V. and Vandenbosch, F. 2020. What makes or breaks an effective disease control campaign? PLOS Computational Biology. 16 (2), p. e1007570.

Fingerprinting the sources of water-mobilized sediment threatening agricultural and water resource sustainability: Progress, challenges and prospects in China

A - Papers appearing in refereed journals
Tang, Q., Fu, B., Wen, A., Zhang, X., He, X. and Collins, A. L. 2019. Fingerprinting the sources of water-mobilized sediment threatening agricultural and water resource sustainability: Progress, challenges and prospects in China. Science China Earth Sciences. 62, pp. 2017-2030.

A soil quality index for evaluation of degradation under land use and soil erosion categories in a small mountainous catchment, Iran

A - Papers appearing in refereed journals
Nosrati, K. and Collins, A. L. 2019. A soil quality index for evaluation of degradation under land use and soil erosion categories in a small mountainous catchment, Iran. Journal of Mountain Science. 16 (11), pp. 2577-2590.

A rapid ammonium fluoride method to determine the oxygen isotope ratio of available phosphorus in tropical soils

A - Papers appearing in refereed journals
Pfahler, V., Bielnicka, A., Smith, A. C., Granger, S. J., Blackwell, M. S. A. and Turner, B. L. 2019. A rapid ammonium fluoride method to determine the oxygen isotope ratio of available phosphorus in tropical soils. Rapid Communications in Mass Spectrometry.

Thorium content in soil, water and sediment samples and fluvial sediment-associated transport in a catchment system with a semi-arid interface, Brazil

A - Papers appearing in refereed journals
Nascimento, R. C., da Silva, Yuri J. A. B., do Nascimento, C. W. A., da Silva, Ygor J. A. B., da Silva, R. J. A. B. and Collins, A. L. 2019. Thorium content in soil, water and sediment samples and fluvial sediment-associated transport in a catchment system with a semi-arid interface, Brazil. Environmental Science and Pollution Research. pp. 1-9.

Changes in soil microbial biomass with manure application in cropping systems: A meta-analysis

A - Papers appearing in refereed journals
Ren, F., Sun, N., Xu, M., Zhang, X., Wu, L. and Xu, M. 2019. Changes in soil microbial biomass with manure application in cropping systems: A meta-analysis. Soil & Tillage Research. 194, p. 104291.

A comparison of Landsat 8, RapidEye and Pleiades products for improving empirical predictions of satellite-derived bathymetry

A - Papers appearing in refereed journals
Cahalane, C, Magee, A, Monteys, X, Casal, G, Hanafin, J and Harris, P. 2019. A comparison of Landsat 8, RapidEye and Pleiades products for improving empirical predictions of satellite-derived bathymetry. Remote Sensing of Environment. 233, p. 111414.

Modeling crop yield and nitrogen use efficiency in wheat and maize production systems under future climate change

A - Papers appearing in refereed journals
Liang, S, Zhang, X., Sun, N., Xu, M. and Wu, L. 2019. Modeling crop yield and nitrogen use efficiency in wheat and maize production systems under future climate change. Nutrient Cycling in Agroecosystems. 115 (1), pp. 117-136.

Field-based determination of controls on runoff and fine sediment generation from lowland grazing livestock fields

A - Papers appearing in refereed journals
Pulley, S. and Collins, A. L. 2019. Field-based determination of controls on runoff and fine sediment generation from lowland grazing livestock fields. Journal of Environmental Management. 249 (1 November), p. 109365.

Species matter when considering landscape effects on carabid distributions

A - Papers appearing in refereed journals
Jowett, K., Milne, A. E., Metcalfe, H., Hassall, K. L., Potts, S. G., Senapathi, D. and Storkey, J. 2019. Species matter when considering landscape effects on carabid distributions. Agriculture, Ecosystems & Environment. 285 (2019), p. 106631.

Fingerprinting sub-basin spatial sediment sources in a large Iranian catchment under dry-land cultivation and rangeland farming: combining geochemical tracers and weathering indices

A - Papers appearing in refereed journals
Raigani, Z. M., Nosrati, K. and Collins, A. L. 2019. Fingerprinting sub-basin spatial sediment sources in a large Iranian catchment under dry-land cultivation and rangeland farming: combining geochemical tracers and weathering indices. Journal of Hydrology: Regional Studies. 24, p. 100613.

A palaeoenvironmental study of particle size‐specific connectivity—New insights and implications from the West Sussex Rother Catchment, United Kingdom

A - Papers appearing in refereed journals
Foster, I. D. L., Biddulph, M., Boardman, J., Copeland-Phillips, R., Evans, J., Pulley, S., Zhang, Y. and Collins, A. L. 2019. A palaeoenvironmental study of particle size‐specific connectivity—New insights and implications from the West Sussex Rother Catchment, United Kingdom. River Research and Applications. 35 (8), pp. 1192-1202.

Fingerprinting sub-basin spatial suspended sediment sources by combining geochemical tracers and weathering indices

A - Papers appearing in refereed journals
Nosrati, K., Fathi, Z. and Collins, A. L. 2019. Fingerprinting sub-basin spatial suspended sediment sources by combining geochemical tracers and weathering indices. Environmental Science and Pollution Research. 26 (27), p. 28401–28414.

Twenty-three unsolved problems in hydrology (UPH) – a community perspective

A - Papers appearing in refereed journals
Bloschl, G., Bierkens, M., Chambel, A., Cudennec, C., Destouni, G., Fiori, A., Kirchner, J. W., McDonnell, J. J., Sivapalan, M., Stumpp, C., Toth, E., Volpi, E., Carr, G., Lupton, C., Salinas, J., Szeles, B., Viglione, A., Aksoy, H., Allen, S. T., Amin, A., Andreassian, V., Arheimer, B., Aryal, S. K., Baker, V., Bardsley, E., Barendrecht, M. H., Bartosova, A., Batelaan, O., Berghuijs, W. R., Beven, K., Blume. T., Bogaard, T., Borges de Amorim, P., Bottcher, M. E., Boulet, G., Breinl, K., Brilly, M., Brocca, L., Buytaert, W., Castellarin, A., Castelletti, A., Chen, X., Chen ,Y., Chen , Y., Chifflard, P., Claps, P., Clark, M. P., Collins, A. L., Croke, B., Dathe, A., David, P. C., De Barros, F. P. J., De Rooij, G., Di Baldassarre, G., Driscoll, J. M., Duethmann, D., Dwivedi, R., Eris, E., Farmer, W. H., Feiccabrino, J., Ferguson, G., Ferrari, E., Ferrais, S., Fersch, B., Finger, D., Foglia, L., Fowler, K., Gartsman, B., Gascoin, S., Gaume, E., Gelfan, A., Geris, J., Gharari, S., Gleeson, T., Glendell, M., Gonzalez Bevacqua, A., Gonzalez-Dugo, M. P., Grimaldi, S., Gupta, A. B., Guse, B., Han, D., Hannah, D., Harpold, A., Haun, S., Heal, K., Helfricht, K., Herrnegger, M., Hipsey, M., Hlavacikova, H., Hohmann, C., Holko, L., Hopkinson, C., Hrachowitz, M., Illangasekare, T. H., Inam, A., Innocente, C., Istanbulluoglu, E., Jarihani, B., Kalantari, Z., Kalvans, A., Khanal, S., Khatami, S., Kiesel, J., Kirby, M., Knoben, W., Kochanek, K., Kohnova, S., Kolechkina, A., Krause, S., Kreamer, D., Kreibich, H., Kunstmann, H., Lange, H., Liberato, M. L. R., Lindquist, E., Link, T., Liu, J., Loucks, D. P., Luce, C., Mahe, G., Makarieva, O., Malard, J., Mashtayeva, S., Maskey, S., Mas-Pla, J., Mavrova-Guirguinova, M., Mazzoleni, M., Mernild, S., Misstear, B. D., Montanari, A., Muller-Thomy, H., Nabizadeh, A., Nardi, F., Neale, C., Nesterova, N., Nurtaev, B., Odongo, V. O., Panda, S., Pande, S., Pang, Z., Papacharalampous, G., Perrin, C., Pfister, L., Pimentel, R., Polo, M. J., Post, D., Prieto Sierra, C., Ramos, M-H., Renner, M., Reynolds, J. E., Ridolfi, E., Rigon, R., Riva, M., Robertson, D. E., Rosso, R., Roy, T., Sa, J. H. M., Salvadori, G., Sandells, M., Schaefli, B., Schumann, A., Scolobig, A., Seibert, J., Servat, E., Shafieri, M., Sharma, A., Sidibe, M., Sidle, R. C., Skaugen, T., Smith, H., Spiessel, S. M., Stein, L., Steinsland, I., Strasser, U., Su, B., Szolgay, J., Tarboton, D., Tauro, F., Thirel, G., Tian, F., Tong, R., Tussupova, K., Tryalsi, H., Uijlenhoet, R., Van Beek, R., Van der Ent, R. J., Van der Ploeg, M., Van Loon, A. F., Van Meerveld, I., Van Nooijen, R., Van Oel, P. R., Vidal, J-P., Von Freyberg, J., Vorogushyn, S., Wachniew, P., Wade, A. J., Ward, P., Westerberg, I. K., White, C., Wood, E. F., Woods, R., Xu, Z., Yilmaz, K. K. and Zhang, Y. 2019. Twenty-three unsolved problems in hydrology (UPH) – a community perspective. Hydrological Sciences Journal. 64 (10), pp. 1141-1158.

Multi-objective optimization as a tool to identify possibilities for future agricultural landscapes

A - Papers appearing in refereed journals
Todman, L. C., Coleman, K., Milne, A. E., Gil, J. D. B., Reidsma, P., Schwoob, M-H., Treyer, S. and Whitmore, A. P. 2019. Multi-objective optimization as a tool to identify possibilities for future agricultural landscapes. Science of the Total Environment. 687 (15 October), pp. 535-545.

A Generic Approach for Live prediction of the risk of agricultural field runoff and delivery to watercourses: linking parsimonious soil-water-connectivity models with live weather data APIs in decision tools

A - Papers appearing in refereed journals
Comber, A., Collins, A. L., Haro-Monteagudo, D., Hess, T., Zhang, Y., Smith, A. and Turner, A. 2019. A Generic Approach for Live prediction of the risk of agricultural field runoff and delivery to watercourses: linking parsimonious soil-water-connectivity models with live weather data APIs in decision tools. Frontiers in Sustainable Food Systems. 3, p. Article 42.

Monte Carlo fingerprinting of the terrestrial sources of different particle size fractions of coastal sediment deposits using geochemical tracers: some lessons for the user community

A - Papers appearing in refereed journals
Gholami, H., TakhtiNajad, E. J., Collins, A. L. and Fathabadi, A. 2019. Monte Carlo fingerprinting of the terrestrial sources of different particle size fractions of coastal sediment deposits using geochemical tracers: some lessons for the user community. Environmental Science and Pollution Research. 26 (13), pp. 13560-13579.

Fingerprinting the contribution of quarrying to fine‐grained bed sediment in a mountainous catchment, Iran

A - Papers appearing in refereed journals
Nosrati, K. and Collins, A. L. 2019. Fingerprinting the contribution of quarrying to fine‐grained bed sediment in a mountainous catchment, Iran. River Research and Applications. 35, pp. 290-300.

Decision support framework to identify lakes that are likely to meet water quality targets if external inputs of phosphorus from agriculture are reduced

A - Papers appearing in refereed journals
May, L., Taylor, P., Spears, B., Pitt, J-A., Collins, A. L., Corkley, I., Anthony, S., Skirvin, D., Lee, D. and Pamela, S. Naden 2019. Decision support framework to identify lakes that are likely to meet water quality targets if external inputs of phosphorus from agriculture are reduced. Limnetica. 38 (1), pp. 489-501.

Optimizing the bioenergy water footprint by selecting SRC willow canopy phenotypes: regional scenario simulations

A - Papers appearing in refereed journals
Richard, B., Richter, G. M., Cerasuolo, M. and Shield, I. F. 2019. Optimizing the bioenergy water footprint by selecting SRC willow canopy phenotypes: regional scenario simulations. Annals of Botany. 124 (4), pp. 531-542.

The sources and dynamics of fine-grained sediment degrading the Freshwater Pearl Mussel (Margaritifera margaritifera) beds of the River Torridge, Devon, UK

A - Papers appearing in refereed journals
Pulley, S., Goubet, A., Mosser, I., Browning, S. and Collins, A. L. 2019. The sources and dynamics of fine-grained sediment degrading the Freshwater Pearl Mussel (Margaritifera margaritifera) beds of the River Torridge, Devon, UK. Science of the Total Environment. 657 (March 20), pp. 420-434.

Investigating the importance of recreational roads as a sediment source in a mountainous catchment using a fingerprinting procedure with different multivariate statistical techniques and a Bayesian un-mixing model

A - Papers appearing in refereed journals
Nosrati, K. and Collins, A. L. 2019. Investigating the importance of recreational roads as a sediment source in a mountainous catchment using a fingerprinting procedure with different multivariate statistical techniques and a Bayesian un-mixing model. Journal of Hydrology. 569 (February), pp. 506-518.

Accounting for data sparsity when forming spatially coherent zones

A - Papers appearing in refereed journals
Hassall, K. L., Whitmore, A. P. and Milne, A. E. 2019. Accounting for data sparsity when forming spatially coherent zones. Applied Mathematical Modelling. 72 (August), pp. 537-552.

Field scale temporal and spatial variability of δ13C, δ15N, TC and TN soil properties : Implications for sediment source tracing

A - Papers appearing in refereed journals
Collins, A. L., Burak, E., Harris, P., Pulley, S., Cardenas, L. M. and Tang, Q. 2019. Field scale temporal and spatial variability of δ13C, δ15N, TC and TN soil properties : Implications for sediment source tracing. Geoderma. 333 (1 January), pp. 108-122.

Determining the sources of nutrient flux to water in headwater catchments: Examining the speciation balance to inform the targeting of mitigation measures

A - Papers appearing in refereed journals
Lloyd, C. E. M., Johnes, P. J., Freer, J. E., Carswell, A. M., Jones, J. I., Stirling, M. W., Hodgkinson, R. A., Richmond, C. and Collins, A. L. 2019. Determining the sources of nutrient flux to water in headwater catchments: Examining the speciation balance to inform the targeting of mitigation measures. Science of the Total Environment. 648, pp. 1179-1200.

The importance of scale in spatially varying coefficient modelling

A - Papers appearing in refereed journals
Murakami, D., Lu, B., Harris, P., Brunsdon, C., Charlton, M., Nakaya, T. and Griffith, D. A. 2019. The importance of scale in spatially varying coefficient modelling. Annals of the American Association of Geographers. 109 (1), pp. 50-70.

A synthetic analysis of livestock manure substitution effects on organic carbon changes in China's arable topsoil

A - Papers appearing in refereed journals
Ren, F., Zhang, X., Liu, J., Sun, N., Sun, Z., Wu, L. and Xu, M. 2018. A synthetic analysis of livestock manure substitution effects on organic carbon changes in China's arable topsoil. Catena. 171, pp. 1-10.

Response of crop yield and nitrogen use efficiency for wheat-maize cropping system to future climate change in northern China

A - Papers appearing in refereed journals
Liang, S., Li, Y., Zhang, X., Sun, Z., Sun, N., Duan, Y., Xu, M. and Wu, L. 2018. Response of crop yield and nitrogen use efficiency for wheat-maize cropping system to future climate change in northern China. Agricultural and Forest Meteorology. 262, pp. 310-321.

Bed and suspended sediment-associated rare earth element concentrations and fluxes in a polluted Brazilian river system

A - Papers appearing in refereed journals
da Silva, Y., Nascimento, C., da Silva, Y., Amorim, F., Singh, V. and Collins, A. L. 2018. Bed and suspended sediment-associated rare earth element concentrations and fluxes in a polluted Brazilian river system . Environmental Science and Pollution Research. 25 (34), pp. 34426-34437.

Subsurface sources contribute substantially to fine‐grained suspended sediment transported in a tropical West African watershed in Burkina Faso

A - Papers appearing in refereed journals
Rode, M., Op de Hipt, F., Collins, A. L., Zhang, Y., Theuring, P., Schkade, U-K. and Diekkruger, B. 2018. Subsurface sources contribute substantially to fine‐grained suspended sediment transported in a tropical West African watershed in Burkina Faso. Land Degradation & Development. 29 (11), pp. 4092-4105.

Tracing sediment sources in a mountainous forest catchment under road construction in northern Iran: comparison of Bayesian and frequentist approaches

A - Papers appearing in refereed journals
Nosrati, K., Haddadchi, A., Collins, A. L., Jalali, S. and Reza Zare, M. 2018. Tracing sediment sources in a mountainous forest catchment under road construction in northern Iran: comparison of Bayesian and frequentist approaches. Environmental Science and Pollution Research. 25, pp. 30979-30999.

Geographically weighted elastic net logistic regression

A - Papers appearing in refereed journals
Comber, A. and Harris, P. 2018. Geographically weighted elastic net logistic regression. Journal of Geographical Systems. 20 (4), pp. 317-341.

A method for uncertainty constraint of catchment discharge and phosphorus load estimates

A - Papers appearing in refereed journals
Holloway, M. J., Beven K. J., Benskin, C. Mc. W. H., Collins, A. L., Evans, R., Fallon, P. D., Forber, K. J., Hiscock, K. M., Kahana R., Macleod, C. J. A., Ockenden, M. C., Villamizar, M., Wearing, C., Withers, P. J. A., Zhou, J. G., Barber, N. J. and Haygarth, P. M. 2018. A method for uncertainty constraint of catchment discharge and phosphorus load estimates. Hydrological Processes. 32 (17), pp. 2779-2787.

Small Water Bodies in Great Britain and Ireland: Ecosystem function, human-generated degradation, and options for restorative action

A - Papers appearing in refereed journals
Riley, W. D., Potter, E. C. E., Collins, A. L., Biggs, J., Jarvie, H. P., Jones, J. I., Kelly-Quinn, M., Ormerod, S. J., Sear, D. A., Wilby, R. L., Broadmeadow, S., Brown, C. D., Chanin, P., Copp, G. H., Cowx, I. G., Grogan, A., Hornby, D. D., Huggett, D., Kelly, M. G., Naura, M., Newman, J. R. and Siriwardena, G. M. 2018. Small Water Bodies in Great Britain and Ireland: Ecosystem function, human-generated degradation, and options for restorative action. Science of the Total Environment. 645, pp. 1598-1616.