Biointeractions and Crop Protection

TitleBiointeractions and Crop Protection
TypeScience Department
InstituteRothamsted Research
HeadLin Field
Executive AssistantSheila Bishop

Outputs

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The role of photoprotection in disease resistance to Septoria tritici blotch in wheat

C2 - Non-edited contributions to conferences
Angelopoulou, D., Kanyuka, K., Murchie, E. and Ray, R. 2019. The role of photoprotection in disease resistance to Septoria tritici blotch in wheat. International Symposium on Cereal Leaf Blights 2019. University College Dublin, Dublin, Ireland 22 May 2019

Knocking down wheat meiotic genes through Virus-induced gene-silencing (VIGS)

C2 - Non-edited contributions to conferences
Desjardins, S., Kanyuka, K. and Higgins, J. D. 2019. Knocking down wheat meiotic genes through Virus-induced gene-silencing (VIGS). The Plant and Animal Genome XXVII Conference (PAG). San Diego, CA, USA 12 Jan 2019

MSH2 is required for obligate crossover formation in wheat

C2 - Non-edited contributions to conferences
Ogle, D., Desjardins, S., Gutterman, I., Simmonds, J., Uauy, C., Kanyuka, K. and Higgins, J. D. 2019. MSH2 is required for obligate crossover formation in wheat. The Plant and Animal Genome XXVII Conference (PAG). San Diego, CA, USA 12 Jan 2019

Sampling for disease absence-deriving informed monitoring from epidemic traits

A - Papers appearing in refereed journals
Bourhis, Y., Gottwald, T.R., Lopez-Ruiz, F.J., Patarapuwadol, S. and Van Den Bosch, F. 2019. Sampling for disease absence-deriving informed monitoring from epidemic traits. Journal of Theoretical Biology. 461, pp. 8-16. https://doi.org/10.1016/j.jtbi.2018.10.038

A loop-mediated isothermal amplification (LAMP) assay for rapid and specific detection of airborne inoculum of Uromyces betae (sugar beet rust)

A - Papers appearing in refereed journals
Kaczmarek, A. M., King, K. M., West, J. S., Stevens, M., Sparkes, D. and Dickinson, M. 2019. A loop-mediated isothermal amplification (LAMP) assay for rapid and specific detection of airborne inoculum of Uromyces betae (sugar beet rust). Plant Disease. 103 (3), pp. 417-421. https://doi.org/10.1094/PDIS-02-18-0337-RE

Extension of Partial Gene Transcripts by Iterative Mapping of RNA-Seq Raw Reads

A - Papers appearing in refereed journals
Singh, K. S., Troczka, B. J., Beadle, K., Field, L. M., Davies, T. G. E., Williamson, M. S., Nauen, R and Bass, C. 2019. Extension of Partial Gene Transcripts by Iterative Mapping of RNA-Seq Raw Reads. IEEE-ACM Transactions on Computational Biology and Bioinformatics. 16 (3), pp. 1036-1041. https://doi.org/10.1109/TCBB.2018.2865309

Development of pull and push-pull systems for management of Lesser Mealworm, Alphitobius diaperinus, in poultry houses using alarm and aggregation pheromones

A - Papers appearing in refereed journals
Hassemer, M., Borges, M., Withall, D., Pickett, J. A., Laumann, R. A., Birkett, M. A. and Blassioli-Moraes, M. C. 2019. Development of pull and push-pull systems for management of Lesser Mealworm, Alphitobius diaperinus, in poultry houses using alarm and aggregation pheromones. Pest Management Science. 75 (4), pp. 1107-1114. https://doi.org/10.1002/ps.5225

Impact of heat processing on the nutritional content of Gryllus bimaculatus (black cricket)

A - Papers appearing in refereed journals
Dobermann, D., Field, L. M. and Michaelson, L. V. 2019. Impact of heat processing on the nutritional content of Gryllus bimaculatus (black cricket). Nutrition Bulletin. pp. 1-7. https://doi.org/10.1111/nbu.12374

The evolutionary origins of pesticide resistance

A - Papers appearing in refereed journals
Hawkins, N. J., Bass, C., Dixon, A. and Neve, P. 2019. The evolutionary origins of pesticide resistance. Biological Reviews. 94 (1), pp. 135-155. https://doi.org/10.1111/brv.12440

Long‐term shifts in the seasonal abundance of adult Culicoides biting midges and their impact on potential arbovirus outbreaks

A - Papers appearing in refereed journals
Sanders, C., Shortall, C. R., England, M., Harrington, R., Purse, B., Burgin, L., Carpenter, S. and Gubbins, S. 2019. Long‐term shifts in the seasonal abundance of adult Culicoides biting midges and their impact on potential arbovirus outbreaks. Journal of Applied Ecology. 56 (7), pp. 1649-1660. https://doi.org/10.1111/1365-2664.13415

The evolution and management of non-target site resistance

C1 - Edited contributions to conferences/learned societies
Neve, P. 2018. The evolution and management of non-target site resistance. 56th National Meeting and Exposition of the American-Chemical-Society (ACS) - Nanoscience, Nanotechnology and Beyond. American Chemical Society (ACS).

A critical review of integrated grass weed management in Ireland

A - Papers appearing in refereed journals
Byrne, R., Spink, J., Freckleton, R., Neve, P. and Barth, S. 2018. A critical review of integrated grass weed management in Ireland. Irish Journal of Agricultural and Food Research. 57 (1), pp. 15-28. https://doi.org/10.1515/ijafr-2018-0003

Migratory Insect Multifrequency Radar Cross Sections for Morphological Parameter Estimation

A - Papers appearing in refereed journals
Wang, R., Hu, C., Liu, C., Long, T., Kong, S., Lang, T., Gould, P. J. L., Lim, J. and Wu, K. 2018. Migratory Insect Multifrequency Radar Cross Sections for Morphological Parameter Estimation. IEEE Transactions on Geoscience and Remote Sensing. 57 (6), pp. 3450-3461. https://doi.org/10.1109/TGRS.2018.2884926

The future of Sustainable Crop Protection Relies on increased diversity of cropping systems and landscapes

B - Book chapters etc edited externally
Storkey, J., Bruce, T., Mcmillan, V. E. and Neve, P. 2018. The future of Sustainable Crop Protection Relies on increased diversity of cropping systems and landscapes. in: Lemaire, G., Cesar de Faccio Carvlho, P., Recous, S. and Kronberg, S. (ed.) Agroecosystem Diversity :Impact on Food Security and Environmental Quality Elsevier. pp. 199-209

Dimeric chalcones derivatives from Myracrodruon urundeuva act as cathepsin V inhibitors

A - Papers appearing in refereed journals
Sarria, A. L. F., Silva, T. L. S., De Oliveira, J. M., De Oliveira, M. A. R., Fernandes, J. B., Das Gracas Fernandes da Silva, M. F., Vieira, P .C., Venancio, T., De Godoy Alves Filho, E., Batista Jr, J. M. and Guido, R. V. C. 2018. Dimeric chalcones derivatives from Myracrodruon urundeuva act as cathepsin V inhibitors. Phytochemistry. 154, pp. 31-38. https://doi.org/10.1016/j.phytochem.2018.06.009

An Exploration of the Function of Specific Components of the Predicted Secretome of Fusarium graminearum During Wheat Infection

F - Theses
Machado, A. 2018. An Exploration of the Function of Specific Components of the Predicted Secretome of Fusarium graminearum During Wheat Infection. F - Theses Rothamsted Research

Impact of epoxiconazole on Fusarium head blight control, grain yield and deoxynivalenol accumulation in wheat

A - Papers appearing in refereed journals
Duan, Y., Xiao, X., Li, T., Chen, W., Wang, J., Fraaije, B. A. and Zhou, M. G. 2018. Impact of epoxiconazole on Fusarium head blight control, grain yield and deoxynivalenol accumulation in wheat. Pesticide Biochemistry and Physiology. 152, pp. 138-147. https://doi.org/10.1016/j.pestbp.2018.09.012

Simultaneous detection of multiple benzimidazole resistant β-tubulin variants of Botrytis cinerea using loop mediated isothermal amplification

A - Papers appearing in refereed journals
Duan, Y., Yang, Y., Wang, J. X., Chen, C. J., Steinberg, G., Fraaije, B. A. and Zhou, M. G. 2018. Simultaneous detection of multiple benzimidazole resistant β-tubulin variants of Botrytis cinerea using loop mediated isothermal amplification. Plant Disease. 102 (10), pp. 2016-2024. https://doi.org/10.1094/PDIS-03-18-0542-RE

Development and application of a simple, rapid and sensitive method for detecting moderately carbendazim‐resistant isolates in Botrytis cinerea

A - Papers appearing in refereed journals
Duan, Y. B., Yang, Y., Li, M. X., Fraaije, B. A. and Zhou, M. G. 2018. Development and application of a simple, rapid and sensitive method for detecting moderately carbendazim‐resistant isolates in Botrytis cinerea. Annals of Applied Biology. 172 (3), pp. 355-365. https://doi.org/10.1111/aab.12426

The factors driving evolved herbicide resistance at a national scale

A - Papers appearing in refereed journals
Hicks, H., Comont, D., Coutts, S. R., Crook, L., Hull, R. I., Norris, K., Neve, P., Childs, D. Z. and Freckleton, R. 2018. The factors driving evolved herbicide resistance at a national scale. Nature Ecology & Evolution. 2, pp. 529-536. https://doi.org/10.1038/s41559-018-0470-1

Abstracts of Presentations at ICPP2018: Analysis of Fusarium graminearum pangenome

C1 - Edited contributions to conferences/learned societies
Machado, A., King, R., Urban, M., Del Ponte, E. M., Tessmann, D. J., Kanyuka, K. and Hammond-Kosack, K. E. 2018. Abstracts of Presentations at ICPP2018: Analysis of Fusarium graminearum pangenome. International Congress of Plant Pathology (ICPP) 2018. Boston, USA 29 Jul 2018 American Phytopathological Society (APS). https://doi.org/10.1094/PHYTO-108-10-S1.1

Using virulence mutants to Identify Avr genes in the wheat stem rust fungus, Puccinia graminis f. sp. tritici

C2 - Non-edited contributions to conferences
Upadhyaya, N. M., Ortiz, D., Chen, J., Ellis, J., Li, F., Mago, R., Kanyuka, K., Figueroa, M., Park, R. F. and Dodds, P. 2018. Using virulence mutants to Identify Avr genes in the wheat stem rust fungus, Puccinia graminis f. sp. tritici. International Congress of Plant Pathology (ICPP) 2018. Boston, USA 29 Jul 2018 American Phytopathological Society (APS). https://doi.org/10.1094/PHYTO-108-10-S1.1

Analysis of small RNA silencing in Zymoseptoria tritici – wheat interactions

A - Papers appearing in refereed journals
Kettles, G. J., Hofinger, B. J., Hu, P., Bayon, C., Rudd, J. J., Balmer, D., Courbot, M., Hammond-Kosack, K. E., Scalliet, G. and Kanyuka, K. 2018. Analysis of small RNA silencing in Zymoseptoria tritici – wheat interactions. bioRxiv. https://doi.org/10.1101/501650

Dramatic changes in genetic diversity of the avirulence effector AvrStb6 in global populations of the wheat pathogen Zymoseptoria tritici

Conference poster
Stephens, C., Blyth, H., Olmez, F., McDonald, M., Solomon, P., Milgate, A., Chen, H., Fraaije, B. A., Rudd, J. J. and Kanyuka, K. 2018. Dramatic changes in genetic diversity of the avirulence effector AvrStb6 in global populations of the wheat pathogen Zymoseptoria tritici. British Society of Plant Pathology Presidential Meeting, Warwick 2018. Warwick University 10 Dec 2018 https://doi.org/N/A

Identification and functional analysis of two P450 enzymes of Gossypium hirsutum involved in DMNT and TMTT biosynthesis

A - Papers appearing in refereed journals
Liu, D., Huang, X., Jing, W., An, X., Zhang, Q., Zhang, H., Zhou, J-J., Zhang, Y. and Guo, Y. 2018. Identification and functional analysis of two P450 enzymes of Gossypium hirsutum involved in DMNT and TMTT biosynthesis. Plant Biotechnology Journal. 16 (2), pp. 581-590. https://doi.org/10.1111/pbi.12797

Odorant receptors and odorant-binding proteins as insect pest control targets: a comparative analysis

A - Papers appearing in refereed journals
Venthur, H. and Zhou, J-J. 2018. Odorant receptors and odorant-binding proteins as insect pest control targets: a comparative analysis. Frontiers in Physiology. 9, p. 01163. https://doi.org/10.3389/fphys.2018.01163

Fungal G-protein-coupled receptors: mediators of pathogenesis and targets for disease control

A - Papers appearing in refereed journals
Brown, N. A., Schrevens, S., Van Dijck, P. and Goldman, G. H. 2018. Fungal G-protein-coupled receptors: mediators of pathogenesis and targets for disease control. Nature Microbiology. 3 (4), pp. 402-414. https://doi.org/10.1038/s41564-018-0127-5

Using epidemiological principles to explain fungicide resistance management tactics: why do mixtures outperform alternations?

A - Papers appearing in refereed journals
Elderfield, J. A. D., Lopez-Ruiz, F. J., Van Den Bosch, F. and Cunniffe, N. J. 2018. Using epidemiological principles to explain fungicide resistance management tactics: why do mixtures outperform alternations? Phytopathology. 108 (7), pp. 803-817. https://doi.org/10.1094/PHYTO-08-17-0277-R

Stress and sexual reproduction affect the dynamics of the wheat pathogen effector AvrStb6 and strobilurin resistance

A - Papers appearing in refereed journals
Kema, G. H. J., Mirzadi Gohari, A., Aouini, L., Gibriel, H. A. Y., Ware, S. B., Van Den Bosch, F., Manning-Smith, R., Alonso Chavez, V., Helps, J., Ben M’Barek, S., Mehrabi, R., Diaz-Trujillo, C., Zamani, E., Schouten, H. J., Van Der Lee, T. A. J., Waalwijk, C., de Waard, M. A., de Wit, P. J. G. M., Verstappen, E. C. P., Thomma, B. P. H. J., Meijer, H. J. G. and Seidl, M.l F. 2018. Stress and sexual reproduction affect the dynamics of the wheat pathogen effector AvrStb6 and strobilurin resistance. Nature Genetics. 50 (3), pp. 375-380. https://doi.org/10.1038/s41588-018-0052-9

Sensilla Morphology and Complex Expression Pattern of Odorant Binding Proteins in the Vetch Aphid Megoura viciae (Hemiptera: Aphididae)

A - Papers appearing in refereed journals
Bruno, D., Grossi, G., Salvia, R., Scala, A., Farina, D., Grimaldi, A., Zhou, J-J., Bufo, S. A., Vogel, H., Grosse-Wilde, E., Hansson, B. S. and Falabella, P. 2018. Sensilla Morphology and Complex Expression Pattern of Odorant Binding Proteins in the Vetch Aphid Megoura viciae (Hemiptera: Aphididae). Frontiers in Physiology. 9 (777). https://doi.org/10.3389/fphys.2018.00777

Identifying when it is financially beneficial to increase or decrease fungicide dose as resistance develops

A - Papers appearing in refereed journals
Van Den Bosch, F., Lopez-Ruiz, F., Oliver, R., Paveley, N., Helps, J. and Van Den Berg, F. 2018. Identifying when it is financially beneficial to increase or decrease fungicide dose as resistance develops. Plant Pathology. 67 (3), pp. 549-560. https://doi.org/10.1111/ppa.12787

Expressional and functional comparisons of two general odorant binding proteins in Agrotis ipsilon

A - Papers appearing in refereed journals
Huang, G-Z., Liu, J-T., Zhou, J-J., Wang, Q., Dong, J-Z., Zhang, Y-J., Li, X-C., Li, J. and Gu, S-H. 2018. Expressional and functional comparisons of two general odorant binding proteins in Agrotis ipsilon. Insect Biochemistry and Molecular Biology. 98 (July), pp. 34-47. https://doi.org/10.1016/j.ibmb.2018.05.003

Suitability of brachiaria grass as a trap crop for management of Chilo partellus

A - Papers appearing in refereed journals
Cheruiyot, D., Midega, C. A.O., Van Den Berg, J., Pickett, J. A. and Khan, Z. R. 2018. Suitability of brachiaria grass as a trap crop for management of Chilo partellus. Entomologia Experimentalis et Applicata. 166 (2), pp. 139-148. https://doi.org/10.1111/eea.12651

Identification of novel bioinspired synthetic mosquito repellents by combined ligand-based screening and OBP-structure-based molecular docking

A - Papers appearing in refereed journals
Thireou, T., Kythreoti, G., Tsitsanou, K. E., Koussis, K., Drakou, C. E., Kinnersley, J., Kröber, T., Guerin, P. M., Zhou, J-J., Iatrou, K., Eliopoulos, E. and Zographos, S. E. 2018. Identification of novel bioinspired synthetic mosquito repellents by combined ligand-based screening and OBP-structure-based molecular docking. Insect Biochemistry and Molecular Biology. 98 (July), pp. 48-61. https://doi.org/10.1016/j.ibmb.2018.05.001

Non‐target site SDHI resistance is present as standing genetic variation in field populations of Zymoseptoria tritici

A - Papers appearing in refereed journals
Yamashita, M. and Fraaije, B. A. 2018. Non‐target site SDHI resistance is present as standing genetic variation in field populations of Zymoseptoria tritici. Pest Management Science. 74 (3), pp. 672-681. https://doi.org/10.1002/ps.4761

The tethered flight technique as a tool for studying life‐history strategies associated with migration in insects

A - Papers appearing in refereed journals
Minter, M., Pearson, A. J., Lim, K. S., Wilson, K., Chapman, J. W. and Jones, C. M. 2018. The tethered flight technique as a tool for studying life‐history strategies associated with migration in insects. Ecological Entomology. 43 (4). https://doi.org/10.1111/een.12521

A climate-adapted push-pull system effectively controls fall armyworm, Spodoptera frugiperda (J E Smith), in maize in East Africa

A - Papers appearing in refereed journals
Midega, C. A. O., Pittchar, J. O., Pickett, J. A., Hailu, G. W. and Khan, Z. R. 2018. A climate-adapted push-pull system effectively controls fall armyworm, Spodoptera frugiperda (J E Smith), in maize in East Africa. Crop Protection. 105, pp. 10-15. https://doi.org/10.1016/j.cropro.2017.11.003

Measuring the effectiveness of management interventions at regional scales by integrating ecological monitoring and modelling

A - Papers appearing in refereed journals
Freckleton, R. P., Hicks, H. L., Comont, D., Crook, L., Hull, R. I., Neve, P. and Childs, D. Z. 2018. Measuring the effectiveness of management interventions at regional scales by integrating ecological monitoring and modelling. Pest Management Science. 74 (10), pp. 2287-2295. https://doi.org/10.1002/ps.4759

Auxin molecular field maps define AUX1 selectivity: many auxin herbicides are not substrates

A - Papers appearing in refereed journals
Hoyerova, K., Hosek, P., Quareshy, M., Li, J., Klima, P., Kubes, M., Yemm, A. A., Neve, P., Tripathi, A., Bennett, M. J. and Napier, R. M. 2018. Auxin molecular field maps define AUX1 selectivity: many auxin herbicides are not substrates. New Phytologist. 217 (4), pp. 1625-1639. https://doi.org/10.1111/nph.14950

Loop-mediated isothermal amplification (LAMP) assays for rapid detection of Pyrenopeziza brassicae (light leaf spot of brassicas)

A - Papers appearing in refereed journals
King, K. M., Krivova, V., Canning, G. G. M., Hawkins, N. J., Kaczmarek, A. M., Perryman, S. A. M., Dyer, P. S., Fraaije, B. A. and West, J. S. 2018. Loop-mediated isothermal amplification (LAMP) assays for rapid detection of Pyrenopeziza brassicae (light leaf spot of brassicas). Plant Pathology. 67 (1), pp. 167-174. https://doi.org/10.1111/ppa.12717

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