BCP: Pesticide Resistance

Title	BCP: Pesticide Resistance
Type	Research cluster

Outputs

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P450 gene duplication and divergence led to the evolution of dual novel functions and insecticide cross-resistance in the brown planthopper Nilaparvata lugens

A - Papers appearing in refereed journals

Duarte, A., Pym, A., Garrood, W. T., Troczka, B. J., Zimmer, C. T., Davies, T. G. E., Nauen, R., O'Reilly, O. A. and Bass, C. G. 2022. P450 gene duplication and divergence led to the evolution of dual novel functions and insecticide cross-resistance in the brown planthopper Nilaparvata lugens. PLOS Genetics. 18 (6), p. e1010279. https://doi.org/10.1371/journal.pgen.1010279

A Deep Learning Application to Map Weed Spatial Extent from Unmanned Aerial Vehicles Imagery

A - Papers appearing in refereed journals

Fraccaro, P., Butt, J., Edwards, B., Freckleton, R. P., Childs, D. Z., Reusch, K. and Comont, D. 2022. A Deep Learning Application to Map Weed Spatial Extent from Unmanned Aerial Vehicles Imagery. Remote Sensing. 14 (17), p. 4197. https://doi.org/10.3390/rs14174197

Dissecting weed adaptation: fitness and trait correlations in herbicide resistant Alopecurus myosuroides

A - Papers appearing in refereed journals

Comont, D., Macgregor, D., Crook, L., Hull, R. I., Nguyen, L., Freckleton, R. P., Childs, D. Z. and Neve, P. 2022. Dissecting weed adaptation: fitness and trait correlations in herbicide resistant Alopecurus myosuroides. Pest Management Science. 78 (7), pp. 3039-3050. https://doi.org/10.1002/ps.6930

The effects of brief heat during early booting on reproductive, developmental and chlorophyll physiological performance in common wheat (Triticum aestivum L.)

A - Papers appearing in refereed journals

Xu, J., Lowe, C., Hernandez-Leon, S. G., Dreisigacker, S., Reynolds, M. P., Valenzuela-Soto, E. M., Paul, M. J. and Heuer, S. 2022. The effects of brief heat during early booting on reproductive, developmental and chlorophyll physiological performance in common wheat (Triticum aestivum L.). Frontiers in Plant Science. 13, p. 886541. https://doi.org/10.3389/fpls.2022.886541

CO2 fluxes from three different temperate grazed pastures using Eddy covariance measurements

A - Papers appearing in refereed journals

Cardenas, L. M., Olde, L., Loick, N., Griffith, B. A., Hill, T., Evans, J., Cowan, N., Segura, C., Sint, H. M., Harris, P., McCalmont, J., Zhu, S., Dobermann, A. and Lee, M. R. F. 2022. CO2 fluxes from three different temperate grazed pastures using Eddy covariance measurements. Science of the Total Environment. 831 (20 July), p. 154819. https://doi.org/10.1016/j.scitotenv.2022.154819

A Near-Chromosome Level Genome Assembly of the European Hoverfly, Sphaerophoria Rueppellii (Diptera: Syrphidae), and a Comparative Analysis of Insecticide Resistance-Related Gene Families in Hemipteran Crop Pests and Pollinators

A - Papers appearing in refereed journals

Bailey, E., Field, L. M., Rawlings, C. J., King, R., Mohareb, F., Hassani-Pak, K., Hughes, D. J., Williamson, M. S., Ganko, E., Buer, B. and Nauen, R. 2022. A Near-Chromosome Level Genome Assembly of the European Hoverfly, Sphaerophoria Rueppellii (Diptera: Syrphidae), and a Comparative Analysis of Insecticide Resistance-Related Gene Families in Hemipteran Crop Pests and Pollinators. BMC Genomics. 23 (1), p. 198. https://doi.org/10.1186/s12864-022-08436-5

A scaffold-level genome assembly of a minute pirate bug, Orius laevigatus, and a comparative analysis of insecticide resistance-related gene families with hemipteran crop pests

A - Papers appearing in refereed journals

Bailey, E., Field, L. M., Rawlings, C. J., King, R., Mahareb, F., Hassani-Pak, K., Hughes, D. J., Williamson, M. S., Ganko, E., Buer, B. and Nauen, R. 2022. A scaffold-level genome assembly of a minute pirate bug, Orius laevigatus, and a comparative analysis of insecticide resistance-related gene families with hemipteran crop pests. BMC Genomics. 23, p. 45. https://doi.org/10.1186/s12864-021-08249-y

The blackgrass genome reveals patterns of non-parallel evolution of polygenic herbicide resistance

A - Papers appearing in refereed journals

Cai, L., Comont, D., Macgregor, D., Lowe, C., Beffa, R., Saski, C. A. and Neve, P. 2022. The blackgrass genome reveals patterns of non-parallel evolution of polygenic herbicide resistance. New Phytologist. https://doi.org/10.1111/nph.18655

Fitness Cost Associated With Enhanced EPSPS Gene Copy Number and Glyphosate Resistance in an Amaranthus tuberculatus Population

A - Papers appearing in refereed journals

Cockerton, H. m., Kaundun, S. S., Nguyen, L., Hutchings, S. J., Dale, R. P., Howell, A. and Neve, P. 2021. Fitness Cost Associated With Enhanced EPSPS Gene Copy Number and Glyphosate Resistance in an Amaranthus tuberculatus Population. Frontiers in Plant Science. 12, p. 651381. https://doi.org/10.3389/fpls.2021.651381

The occurrence of herbicide-resistant Avena fatua (wild oats) populations to ACCase-inhibiting herbicides in Ireland

A - Papers appearing in refereed journals

Byrne, R., Vijaya Bhaskar, A. V., Spink, J., Freckleton, R., Neve, P. and Barth, S. 2021. The occurrence of herbicide-resistant Avena fatua (wild oats) populations to ACCase-inhibiting herbicides in Ireland. Irish Journal of Agricultural and Food Research. pp. 1-6. https://doi.org/10.15212/ijafr-2020-0127

Evaluating the Effects of Minimal Risk Natural Products for Control of the Tick, Ixodes scapularis (Acari: Ixodidae)

A - Papers appearing in refereed journals

Dyer, M. C., Requintina, M. D., Berger, K., Puggioni, G. and Mather, T. N. 2021. Evaluating the Effects of Minimal Risk Natural Products for Control of the Tick, Ixodes scapularis (Acari: Ixodidae). Journal of Medical Entomology. 58 (1), pp. 390-397. https://doi.org/10.1093/jme/tjaa188

Lack of an Intron in Cytochrome b and Overexpression of Sterol 14 alpha-Demethylase Indicate a Potential Risk for QoI and DMI Resistance Development in Neophysopella spp. on Grapes

A - Papers appearing in refereed journals

Santos, R. F., Amorium, L., Wood, A. K. M., Bibiano, L. B. J. and Fraaije, B. A. 2021. Lack of an Intron in Cytochrome b and Overexpression of Sterol 14 alpha-Demethylase Indicate a Potential Risk for QoI and DMI Resistance Development in Neophysopella spp. on Grapes. Phytopathology. 111 (10), pp. 1726-1734. https://doi.org/10.1094/PHYTO-11-20-0514-R

Diamide insecticide resistance in transgenic Drosophila and Sf9-cells expressing a full-length diamondback moth ryanodine receptor carrying an I4790M mutation

A - Papers appearing in refereed journals

Richardson, E., Homem, R. A., Troczka, B. J., George, C. H., Ebbinghaus-Kintscher, U., Williamson, M. S., Nauen, R. and Davies, T. G. E. 2021. Diamide insecticide resistance in transgenic Drosophila and Sf9-cells expressing a full-length diamondback moth ryanodine receptor carrying an I4790M mutation. Pest Management Science. https://doi.org/10.1002/ps.6730

Chimeric Investigations into the Diamide Binding Site on the Lepidopteran Ryanodine Receptor

A - Papers appearing in refereed journals

Richardson, E., Troczka, B. J., Gutbrod, O., Ebbinghaus-Kintscher, U., Williamson, M. S., George, C.H., Nauen, R. and Davies, T. G. E. 2021. Chimeric Investigations into the Diamide Binding Site on the Lepidopteran Ryanodine Receptor. International Journal Of Molecular Sciences. 22 (23), p. 130333. https://doi.org/10.3390/ijms222313033

Acute Imidacloprid Exposure Alters Mitochondrial Function in Bumblebee Flight Muscle and Brain

A - Papers appearing in refereed journals

Sargent, C., Ebanks, B., Hardy, I. C. W., Davies, T. G. E., Chakrabarti, L. and Stoger, R. 2021. Acute Imidacloprid Exposure Alters Mitochondrial Function in Bumblebee Flight Muscle and Brain. Frontiers in Insect Science. https://doi.org/10.3389/finsc.2021.765179

Maximizing realized yield by breeding for disease tolerance: A case study for Septoria tritici blotch

A - Papers appearing in refereed journals

Van Den Bosch, F., Smith, J., Wright, P., Milne, A. E., Van Den Berg, F., Kock-Appelgren, P., Foulkes, J. and Paveley, N. 2021. Maximizing realized yield by breeding for disease tolerance: A case study for Septoria tritici blotch. Plant Pathology. https://doi.org/10.1111/ppa.13509

Evaluating the impact of pyrethroid insecticide resistance on reproductive fitness in Sitobion avenae

A - Papers appearing in refereed journals

Walsh, L. E., Schmidt, O., Foster, S. P., Varis, C., Grant, J., Malloch, G. L. and Gaffney, M. T. 2021. Evaluating the impact of pyrethroid insecticide resistance on reproductive fitness in Sitobion avenae. Annals of Applied Biology - AAB. https://doi.org/10.1111/aab.12738

Investigating the origins and evolution of a glyphosate-resistant weed invasion in South America

A - Papers appearing in refereed journals

Gaines, T., Slavov, G., Hughes, D. J., Kupper, A., Sparks, C., Oliva, J., Vila-Aiub, M., Alejandro Garcia, M., Aldo Merotto Jr and Neve, P. 2021. Investigating the origins and evolution of a glyphosate-resistant weed invasion in South America. Molecular Ecology. 30 (21), pp. 5360-5372. https://doi.org/10.1111/mec.16221

Epidemiological studies of pan-azole resistant Aspergillus fumigatus populations sampled during tulip cultivation show clonal expansion with acquisition of multi-fungicide resistance as potential driver

A - Papers appearing in refereed journals

Fraaije, B. A., Atkins, S. L., Santos, R. F., Hanley, S. J., West, J. S. and Lucas, J. 2021. Epidemiological studies of pan-azole resistant Aspergillus fumigatus populations sampled during tulip cultivation show clonal expansion with acquisition of multi-fungicide resistance as potential driver . Microorganisms. 9 (11), p. 2379. https://doi.org/10.3390/microorganisms9112379

Genomic-based epidemiology reveals independent origins and gene flow of glyphosate resistance in Bassia scoparia populations across North America

A - Papers appearing in refereed journals

Ravet, K., Sparks, C. D., Dixon, A. L., Kupper, A., Westra, E. P., Pettinga, D. J., Tranel, P. J., Felix, J., Morishita, D. W., Jha, P., Kniss, A., Stahlman, P. W., Neve, P., Patterson, E. L., Westra, P. and Gaines, T. A. 2021. Genomic-based epidemiology reveals independent origins and gene flow of glyphosate resistance in Bassia scoparia populations across North America. Molecular Ecology. 30 (21), pp. 5343-5359. https://doi.org/10.1111/mec.16215

Monitoring of Brazilian wheat blast field populations reveals resistance to QoI, DMI, and SDHI fungicides

A - Papers appearing in refereed journals

Vicentini, S. N. C., Casado, P. S., DeCarvalho, G., Moreira, S. I., Dorgian, A. F., Silva, T. C., Silva, A. G., Custodio, A. P. A., Gomes, A. C. S., Maciel, J. L. N., Hawkins, N. J., McDonald, B. A., Fraaije, B. A. and Ceresini, P. C. 2021. Monitoring of Brazilian wheat blast field populations reveals resistance to QoI, DMI, and SDHI fungicides. Plant Pathology. 71 (2), pp. 304-321. https://doi.org/10.1111/ppa.13470

Fungicide resistance management: maximising the effective life of plant protection products

A - Papers appearing in refereed journals

Corkley, I., Fraaije, B. A. and Hawkins, N. J. 2021. Fungicide resistance management: maximising the effective life of plant protection products. Plant Pathology. 00, pp. 1-20. https://doi.org/10.1111/ppa.13467

Identifying aphid resistance in the ancestral wheat Triticum monococcum under field conditions.

A - Papers appearing in refereed journals

Simon, A. L., Caulfield, J. C., Hammond-Kosack, K. E., Field, L. M. and Aradottir, G. I. 2021. Identifying aphid resistance in the ancestral wheat Triticum monococcum under field conditions. Scientific Reports. 11, p. 13495. https://doi.org/10.1038/s41598-021-92883-9

Fungicide resistance status and chemical control options for the brassica pathogen Pyrenopeziza brassicae

A - Papers appearing in refereed journals

King, K. M., Bucur, D. E., Hawkins, N. J., Kaczmarek, A. M., Duan, Y., Kildea, S., West, J. S. and Fraaije, B. A. 2021. Fungicide resistance status and chemical control options for the brassica pathogen Pyrenopeziza brassicae. Plant Pathology. 70 (9), pp. 2086-2103. https://doi.org/10.1111/ppa.13441

The nitrogen economy of rice-livestock systems in Uruguay

A - Papers appearing in refereed journals

Castillo, J., Kirk, G. J. D., Rivero, M. J., Dobermann, A. and Haefele, S. M. 2021. The nitrogen economy of rice-livestock systems in Uruguay. Global Food Security. 30 (September), p. 100566. https://doi.org/10.1016/j.gfs.2021.100566

Global patterns in genomic diversity underpinning the evolution of insecticide resistance in the aphid crop pest, Myzus persicae

A - Papers appearing in refereed journals

Singh, K. S., Cordeiro, E. M. G., Troczka, B. J., Pym, A., Mackisack, J., Mathers, T. C., Duarte, A., Legeai, F., Robin, S., Bielza, P., Burrack, H. J., Charaabi, K., Denholm, I., Figueroa, C. C., Ffrench-Constant, R. H., Jander, G., Margaritopoulos, J. T., Mazzoni, E., Nauen, R., Ramirez, C. C., Ren, G., Stepanyan, G., Umina, I., Voronova, N. V., Vontas, J., Williamson, M. S., Wilson, A. C. C., Xi-Wu, G., Youn, Y-N., Zimmer, C. T., Simon, J-C., Hayward, A. and Bass, C. G. 2021. Global patterns in genomic diversity underpinning the evolution of insecticide resistance in the aphid crop pest, Myzus persicae. Communications Biology. 4 (1), pp. 847-end. https://doi.org/10.1038/s42003-021-02373-x

Modelling in cassava production and pest management under biotic and abiotic constraints

A - Papers appearing in refereed journals

Alonso Chavez, V., Milne, A. E., Van Den Bosch, F., Pita, J. and Mcquaid, C. F. 2021. Modelling in cassava production and pest management under biotic and abiotic constraints. Plant Molecular Biology. https://doi.org/10.1007/s11103-021-01170-8

Laboratory Selection, Cross-Resistance, Risk Assessment to Lambda-Cyhalothrin Resistance, and Monitoring of Insecticide Resistance for Plant Bug Lygus pratensis (Hemiptera: Miridae) in Farming-Pastoral Ecotones of Northern China

A - Papers appearing in refereed journals

Tan, Y., Ma, Y., Jiaa, B., Homem, R. A., Williamson, M. S., Gao, S-J., Han, H-B., Xiang, K-F., Sun, X-T., Gao, X. and Pang, B-P. 2021. Laboratory Selection, Cross-Resistance, Risk Assessment to Lambda-Cyhalothrin Resistance, and Monitoring of Insecticide Resistance for Plant Bug Lygus pratensis (Hemiptera: Miridae) in Farming-Pastoral Ecotones of Northern China. Journal of Economic Entomology. 114 (2), pp. 891-902. https://doi.org/10.1093/jee/toaa305

A toxicogenomics approach reveals characteristics supporting the honey bee (Apis mellifera L.) safety profile of the butenolide insecticide flupyradifurone

A - Papers appearing in refereed journals

Hass, J., Zaworra, M., Glaubitz, J., Hertlein, G., Kohler, M., Lagojda, A., Lueke, B., Maus, C., Almanza, M-T., Davies, T. G. E., Bass, C. and Nauen, R. 2021. A toxicogenomics approach reveals characteristics supporting the honey bee (Apis mellifera L.) safety profile of the butenolide insecticide flupyradifurone. Ecotoxicology and Environmental Safety. 217 (1 July), p. 112247. https://doi.org/10.1016/j.ecoenv.2021.112247

Adaptation at different points along antibiotic concentration gradients

A - Papers appearing in refereed journals

Lagator, M., Uecker, H. and Neve, P. 2021. Adaptation at different points along antibiotic concentration gradients. Biology Letters. 17 (5), p. 20200913. https://doi.org/10.1098/rsbl.2020.0913

African soil properties and nutrients mapped at 30 m spatial resolution using two-scale ensemble machine learning

A - Papers appearing in refereed journals

Hengl, T., Miller, M. A. E., Krizan, J., Shepherd, K. D., Sila, A., Kilibarda, M., Antonijevic, O., Glusica, L., Dobermann, A., Haefele, S. M., McGrath, S. P., Acquah, G., Collinson, J., Parente, L., Sheykmousa, M., Saito, K., Johnson, J-M., Chamberlain, J., Silatsa, F. B. T., Yemefack, M., Wendt, J., MacMillan, R. A., Wheeler, I. and Crouch, J. 2021. African soil properties and nutrients mapped at 30 m spatial resolution using two-scale ensemble machine learning. Scientific Reports. 11, p. 6130. https://doi.org/10.1038/s41598-021-85639-y

Defining Integrated Weed Management: A Novel Conceptual Framework for Models

A - Papers appearing in refereed journals

Storkey, J., Helps, J., Hull, R. I., Milne, A. E. and Metcalfe, H. 2021. Defining Integrated Weed Management: A Novel Conceptual Framework for Models. Agronomy. 11 (4), p. 747. https://doi.org/10.3390/agronomy11040747

Evidence for the Involvement of the Chemosensory Protein AgosCSP5 in Resistance to Insecticides in the Cotton Aphid, Aphis gossypii

A - Papers appearing in refereed journals

Li, F., Venthur, H., Wang, S., Homem, R. A. and Zhou, J-J. 2021. Evidence for the Involvement of the Chemosensory Protein AgosCSP5 in Resistance to Insecticides in the Cotton Aphid, Aphis gossypii. Insects. 12 (4), p. 335. https://doi.org/10.3390/insects12040335

Contrasting levels of genetic predictability in the evolution of resistance to major classes of fungicides

A - Papers appearing in refereed journals

Hawkins, N. J. and Fraaije, B. A. 2021. Contrasting levels of genetic predictability in the evolution of resistance to major classes of fungicides. Molecular Ecology. https://doi.org/10.1111/mec.15877

Site‐specific weed management—constraints and opportunities for the weed research community: Insights from a workshop

A - Papers appearing in refereed journals

Lati, R. N., Rasmussen, J., Andujar, D., Dorado, J., Berge, T. W., Wellhausen, C., Pflanz, M., Nordmeyer, H., Schirrmann, M., Eizenberg, H., Neve, P., Nyholm, R. and Christensen, J. S. 2021. Site‐specific weed management—constraints and opportunities for the weed research community: Insights from a workshop. Weed Research. 61 (3), pp. 147-153. https://doi.org/10.1111/wre.12469

The potential for soybean to diversify the production of plant-based protein in the UK

A - Papers appearing in refereed journals

Coleman, K., Whitmore, A. P., Hassall, K. L., Shield, I. F., Semenov, M. A., Dobermann, A., Bourhis, Y., Eskandary, A. and Milne, A. E. 2021. The potential for soybean to diversify the production of plant-based protein in the UK. Science of the Total Environment. 767, p. 144903. https://doi.org/10.1016/j.scitotenv.2020.144903

Sublethal and transgenerational effects of lambda-cyhalothrin on the mirid bugs Lygus pratensis Linnaeus and Polymerus cognatus Fieber

A - Papers appearing in refereed journals

Tan, Y., Jia, B., Foster, S. P., Homem, R. A., Williamson, M. S., Han, H-B., Shan, Y-M. and Pang, B-P. 2021. Sublethal and transgenerational effects of lambda-cyhalothrin on the mirid bugs Lygus pratensis Linnaeus and Polymerus cognatus Fieber . Crop Protection. 139 (January), p. 105354. https://doi.org/10.1016/j.cropro.2020.105354

Artificial neural networks for monitoring network optimisation—a practical example using a national insect survey

A - Papers appearing in refereed journals

Bourhis, Y., Bell, J. R., Van Den Bosch, F. and Milne, A. E. 2021. Artificial neural networks for monitoring network optimisation—a practical example using a national insect survey. Environmental Modelling and Software. 135, p. 104925. https://doi.org/10.1016/j.envsoft.2020.104925

Remarkable recent changes in genetic diversity of the avirulence gene AvrStb6 in global populations of the wheat pathogen Zymoseptoria tritici

A - Papers appearing in refereed journals

Stephens, C., Olmez, F., Blyth, H., McDonald, M., Bansal, A., Turgay, E. B., Hahn, F., Saintenac, C., Nekrasov, V., Solomon, P., Milgate, A., Fraaije, B. A., Rudd, J. J. and Kanyuka, K. 2021. Remarkable recent changes in genetic diversity of the avirulence gene AvrStb6 in global populations of the wheat pathogen Zymoseptoria tritici. Molecular Plant Pathology. 22 (9), pp. 1121-1133. https://doi.org/10.1111/mpp.13101

Redroot pigweed (Amaranthus retroflexus L.) and lamb's quarters ‎‎(Chenopodium album L.) populations exhibit a high degree of ‎morphological and biochemical diversity

A - Papers appearing in refereed journals

Moghadam, S. H., Alebrahim, M. T., Tobeh, A., Mohebodini, M., Werck-Reichhart, D., Macgregor, D. and Tseng, Te Ming 2021. Redroot pigweed (Amaranthus retroflexus L.) and lamb's quarters ‎‎(Chenopodium album L.) populations exhibit a high degree of ‎morphological and biochemical diversity . Frontiers in Plant Science. 12, p. 593037. https://doi.org/10.3389/fpls.2021.593037