CAS: Molecular Discovery
| Title | CAS: Molecular Discovery |
|---|---|
| Type | Research cluster |
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(+)-(10R )-germacrene A synthase from goldenrod, Solidago canadensis ; cDNA isolation, bacterial expression and functional analysis
A - Papers appearing in refereed journals
Prosser, I. M., Phillips, A. L., Gittings, S., Lewis, M. J., Hooper, A. M., Pickett, J. A. and Beale, M. H. 2002. (+)-(10R )-germacrene A synthase from goldenrod, Solidago canadensis ; cDNA isolation, bacterial expression and functional analysis. Phytochemistry. 60, pp. 691-702.
13C metabolic flux analysis identifies an unusual route for pyruvate dissimilation in mycobacteria which requires isocitrate lyase and carbon dioxide fixation
A - Papers appearing in refereed journals
Beste, D. J. V., Bonde, B., Hawkins, N. D., Ward, J. L., Beale, M. H., Noack, S., Noh, K., Kruger, N. J., Ratcliffe, R. G. and Mcfadden, J. 2011. 13C metabolic flux analysis identifies an unusual route for pyruvate dissimilation in mycobacteria which requires isocitrate lyase and carbon dioxide fixation. PLOS Pathogens. 7, p. e1002091 (18pp). https://doi.org/10.1371/journal.ppat.1002091
13C-flux spectral analysis of host-pathogen metabolism reveals a mixed diet for intracellular Mycobacterium tuberculosis
A - Papers appearing in refereed journals
Beste, D. J. V., Noh, K., Niedenfuhr, S., Mendum, T. A., Hawkins, N. D., Ward, J. L., Beale, M. H., Wiechert, W. and Mcfadden, J. 2013. 13C-flux spectral analysis of host-pathogen metabolism reveals a mixed diet for intracellular Mycobacterium tuberculosis. Chemistry and Biology. 20 (8), pp. 1012-1021. https://doi.org/10.1016/j.chembiol.2013.06.012
1H-NMR screening for the high-throughput determination of genotype and environmental effects on the content of asparagine in wheat grain
A - Papers appearing in refereed journals
Corol, D. I., Ravel, C., Rakszegi, M., Charmet, G., Bedo, Z., Beale, M. H., Shewry, P. R. and Ward, J. L. 2016. 1H-NMR screening for the high-throughput determination of genotype and environmental effects on the content of asparagine in wheat grain. Plant Biotechnology Journal. 14 (1), pp. 128-139. https://doi.org/10.1111/pbi.12364
2-Carboxy-D-arabinitol 1-phosphate (CA1P) phosphatase: evidence for a wider role in plant Rubisco regulation
A - Papers appearing in refereed journals
Andralojc, P. J., Madgwick, P. J., Tao, Y., Keys, A. J., Ward, J. L., Beale, M. H., Loveland, J. E., Jackson, P. J., Willis, A. C., Gutteridge, S. and Parry, M. A. J. 2012. 2-Carboxy-D-arabinitol 1-phosphate (CA1P) phosphatase: evidence for a wider role in plant Rubisco regulation. Biochemical Journal. 442 (3), pp. 733-742. https://doi.org/10.1042/BJ20111443
A combined 1H nuclear magnetic resonance and electrospray ionization-mass spectrometry analysis to understand the basal metabolism of plant-pathogenic Fusarium spp
A - Papers appearing in refereed journals
Lowe, R. G. T., Allwood, J. W., Galster, A. M., Urban, M., Daudi, A., Canning, G., Ward, J. L., Beale, M. H. and Hammond-Kosack, K. E. 2010. A combined 1H nuclear magnetic resonance and electrospray ionization-mass spectrometry analysis to understand the basal metabolism of plant-pathogenic Fusarium spp. Molecular Plant-Microbe Interactions - MPMI. 23 (12), pp. 1605-1618. https://doi.org/10.1094/MPMI-04-10-0092
A dual-targeted purple acid phosphatase in Arabidopsis thaliana moderates carbon metabolism and its overexpression leads to faster plant growth and higher seed yield
A - Papers appearing in refereed journals
Sun, F., Suen, P. K., Zhang, Y., Liang, C., Carrie, C., Whelan, J., Ward, J. L., Hawkins, N. D., Jiang, L. and Lim, B. L. 2012. A dual-targeted purple acid phosphatase in Arabidopsis thaliana moderates carbon metabolism and its overexpression leads to faster plant growth and higher seed yield. New Phytologist. 194 (1), pp. 206-219. https://doi.org/10.1111/j.1469-8137.2011.04026.x
A genome-wide metabolomic resource for tomato fruit from Solanum pennellii
A - Papers appearing in refereed journals
Perez-Fons, L., Wells, T., Corol, D. I., Ward, J. L., Gerrish, C., Beale, M. H., Seymour, G. B., Bramley, P. M. and Fraser, P. D. 2014. A genome-wide metabolomic resource for tomato fruit from Solanum pennellii. Scientific Reports. 4, p. 3859. https://doi.org/10.1038/srep03859
A metabolomic study of substantial equivalence of field-grown genetically modified wheat
A - Papers appearing in refereed journals
Baker, J. M., Hawkins, N. D., Ward, J. L., Lovegrove, A., Napier, J. A., Shewry, P. R. and Beale, M. H. 2006. A metabolomic study of substantial equivalence of field-grown genetically modified wheat. Plant Biotechnology Journal. 4 (4), pp. 381-392. https://doi.org/10.1111/j.1467-7652.2006.00197.x
A multiplex approach of MS, 1D-, and 2D-NMR metabolomicsin plant ontogeny A case study on Clusia minor L. organs (leaf, flower, fruit, and seed)
A - Papers appearing in refereed journals
Noleto-Dias, C., Farag, M. A., Porzel, A., Tavares, J. F. and Wessjohann, L. A. 2023. A multiplex approach of MS, 1D-, and 2D-NMR metabolomicsin plant ontogeny A case study on Clusia minor L. organs (leaf, flower, fruit, and seed). Phytochemical Analysis. https://doi.org/10.1002/pca.3300
A Possible Connection Between Plant Longevity and the Absence of Protein Fibrillation: Basis for Identifying Aggregation Inhibitors in Plants
A - Papers appearing in refereed journals
Mohammed-Beigi, H., Kjaer, L., Eskandari, H., Aliakbari, F., Christiansen, G., Ruvo, G., Ward, J. L. and Otzen, D.E. 2019. A Possible Connection Between Plant Longevity and the Absence of Protein Fibrillation: Basis for Identifying Aggregation Inhibitors in Plants. Frontiers in Plant Science. 10, p. 148. https://doi.org/10.3389/fpls.2019.00148
A single residue change leads to a hydroxylated product from the class II diterpene cyclization catalyzed by abietadiene synthase
A - Papers appearing in refereed journals
Criswell, J., Potter, K., Shephard, F., Beale, M. H. and Peters, R. J. 2012. A single residue change leads to a hydroxylated product from the class II diterpene cyclization catalyzed by abietadiene synthase. Organic Letters. 14, pp. 5828-5831. https://doi.org/10.1021/ol3026022
A willow UDP-glycosyltransferase involved in salicinoid biosynthesis
A - Papers appearing in refereed journals
Kulasekaran, S., Cerezo-Medina, S., Harflett, C., Lomax, C., DeJong, F., Rendour, A., Ruvo, G., Hanley, S. J., Beale, M. H. and Ward, J. L. 2020. A willow UDP-glycosyltransferase involved in salicinoid biosynthesis. Journal of Experimental Botany. 72 (5), p. 1634–1648. https://doi.org/10.1093/jxb/eraa562
Acutifoliside, a novel benzoic acid glycoside from Salix acutifolia
A - Papers appearing in refereed journals
Wu, Y., Dobermann, D., Beale, M. H. and Ward, J. L. 2016. Acutifoliside, a novel benzoic acid glycoside from Salix acutifolia. Natural Product Research. 30 (15), pp. 1731-1739. https://doi.org/10.1080/14786419.2015.1137571
An efficient high throughput metabotyping platform for screening of biomass willows
A - Papers appearing in refereed journals
Corol, D. I., Harflett, C., Beale, M. H. and Ward, J. L. 2014. An efficient high throughput metabotyping platform for screening of biomass willows. Metabolites. 4 (4), pp. 946-976. https://doi.org/10.3390/metabo4040946
An integrated study of grain development of wheat (cv. Hereward)
A - Papers appearing in refereed journals
Shewry, P. R., Mitchell, R. A. C., Tosi, P., Wan, Y., Toscano-Underwood, C., Lovegrove, A., Freeman, J., Toole, G. A., Mills, E. N. C. and Ward, J. L. 2012. An integrated study of grain development of wheat (cv. Hereward). Journal of Cereal Science. 56, pp. 21-30. https://doi.org/10.1016/j.jcs.2011.11.007
An inter-laboratory comparison demonstrates that [1H]-NMR metabolite fingerprinting is a robust technique for collaborative plant metabolomic data collection
A - Papers appearing in refereed journals
Ward, J. L., Baker, J. M., Miller, S. J., Deborde, C., Maucourt, M., Biais, B., Rolin, D., Moing, A., Moco, S., Vervoort, J., Lommen, A., Schafer, H., Humpfer, E. and Beale, M. H. 2010. An inter-laboratory comparison demonstrates that [1H]-NMR metabolite fingerprinting is a robust technique for collaborative plant metabolomic data collection. Metabolomics. 6, pp. 263-273. https://doi.org/10.1007/s11306-010-0200-4
Analysis of detergent-resistant membranes in Arabidopsis. Evidence for plasma membrane lipid rafts
A - Papers appearing in refereed journals
Borner, G. H. H., Sherrier, D. J., Weimar, T., Michaelson, L. V., Hawkins, N. D., Macaskill, A., Napier, J. A., Beale, M. H., Lilley, K. S. and Dupree, P. 2005. Analysis of detergent-resistant membranes in Arabidopsis. Evidence for plasma membrane lipid rafts. Plant Physiology. 137 (1), pp. 104-116. https://doi.org/10.1104/pp.104.053041
Aphid alarm pheromone produced by transgenic plants affects aphid and parasitoid behavior
A - Papers appearing in refereed journals
Beale, M. H., Birkett, M. A., Bruce, T. J. A., Chamberlain, K., Field, L. M., Huttly, A. K., Martin, J. L., Parker, R., Phillips, A. L., Pickett, J. A., Prosser, I. M., Shewry, P. R., Smart, L. E., Wadhams, L. J., Woodcock, C. M. and Zhang, Y. 2006. Aphid alarm pheromone produced by transgenic plants affects aphid and parasitoid behavior. Proceedings of the National Academy of Sciences. 103, pp. 10509-10513. https://doi.org/10.1073/pnas.0603998103
Aphid-induced accumulation of trehalose in Arabidopsis thaliana is systemic and dependent upon aphid density
A - Papers appearing in refereed journals
Hodge, S., Ward, J. L., Beale, M. H., Bennett, M., Mansfield, J. W. and Powell, G. 2013. Aphid-induced accumulation of trehalose in Arabidopsis thaliana is systemic and dependent upon aphid density. Planta. 237, pp. 1057-1064. https://doi.org/10.1007/s00425-012-1826-4
Application of metabolomics and molecular networking in investigating the chemical profile and antitrypanosomal activity of British bluebells ( Hyacinthoides non-scripta )
A - Papers appearing in refereed journals
Raheem, D., Tawfike, A. F, Abdulmohsen, U., Edrada-Ebel, R. and Fitzsimmons-Thoss, V. 2019. Application of metabolomics and molecular networking in investigating the chemical profile and antitrypanosomal activity of British bluebells ( Hyacinthoides non-scripta ). Scientific Reports. 9 (1), p. 2547. https://doi.org/10.1038/s41598-019-38940-w
Arabidopsis VARIEGATED 3 encodes a chloroplast-targeted, zinc-finger protein required for chloroplast and palisade cell development
A - Papers appearing in refereed journals
Naested, H., Holm, A., Jenkins, T., Nielsen, H. B., Harris, C. A., Beale, M. H., Andersen, M., Mant, A., Scheller, H., Camara, B., Mattsson, O. and Munday, J. 2004. Arabidopsis VARIEGATED 3 encodes a chloroplast-targeted, zinc-finger protein required for chloroplast and palisade cell development. Journal Of Cell Science. 117 (20), pp. 4807-4818. https://doi.org/10.1242/jcs.01360
Are GM and conventionally bred cereals really different?
A - Papers appearing in refereed journals
Shewry, P. R., Baudo, M., Lovegrove, A., Powers, S. J., Napier, J. A., Ward, J. L., Baker, J. M. and Beale, M. H. 2007. Are GM and conventionally bred cereals really different? Trends in Food Science and Technology. 18, pp. 201-209. https://doi.org/10.1016/j.tifs.2006.12.010
Assessment of 1H NMR spectroscopy and multivariate analysis as a technique for metabolite fingerprinting of Arabidopsis thaliana
A - Papers appearing in refereed journals
Ward, J. L., Harris, C., Lewis, J. and Beale, M. H. 2003. Assessment of 1H NMR spectroscopy and multivariate analysis as a technique for metabolite fingerprinting of Arabidopsis thaliana. Phytochemistry. 62, pp. 949-957.
Bioassay-led isolation of Myrothecium verrucaria and verrucarin A as germination inhibitors of Orobanche crenata
A - Papers appearing in refereed journals
El-Kassas, R., Karam El-Din, Z., Beale, M. H., Ward, J. L. and Strange, R. N. 2005. Bioassay-led isolation of Myrothecium verrucaria and verrucarin A as germination inhibitors of Orobanche crenata. Weed Research. 45 (3), pp. 212-219. https://doi.org/10.1111/j.1365-3180.2005.00448.x
Caged plant growth regulators
B - Book chapters etc edited externally
Allan, A. C., Ward, J. L., Beale, M. H. and Trewavas, A. J. 1998. Caged plant growth regulators. in: Marriott, G. (ed.) Methods in Enzymology Vol. 291. Caged Compounds Academic Press, San Diego.
Characterisation of the willow phenylalanine ammonia-lyase (Pal) gene family reveals expression differences compared with poplar
A - Papers appearing in refereed journals
De Jong, F., Hanley, S. J., Beale, M. H. and Karp, A. 2015. Characterisation of the willow phenylalanine ammonia-lyase (Pal) gene family reveals expression differences compared with poplar. Phytochemistry. 117 (September), pp. 90-97. https://doi.org/10.1016/j.phytochem.2015.06.005
Chemical profiling of Artemisia herba-alba, Cuminum cyminum, Cinnamomum camphora, and Salvia rosmarinus essential oils and assessment of their insecticidal potential to control the wild cochineal Dactylopius opuntiae (Cockerell)
A - Papers appearing in refereed journals
Naboulsi, I., El Fakhouri, K., Annaz, H., Lamzira, R., Ramdani, C., Bitchagno-Mbahbou, G., Boulamtat, R., Ben Bakrim, W., Mahdi, I., Aboulmouhajir, A., Yasri, A., El Bouhssini, M., Ward, J. L. and Sobeh, M. 2023. Chemical profiling of Artemisia herba-alba, Cuminum cyminum, Cinnamomum camphora, and Salvia rosmarinus essential oils and assessment of their insecticidal potential to control the wild cochineal Dactylopius opuntiae (Cockerell). Crop Protection. 171, p. 106286. https://doi.org/10.1016/j.cropro.2023.106286
Chickpea wilt: identification and toxicity of 8-0 -methyl-fusarubin from Fusarium acutatum
A - Papers appearing in refereed journals
Gopalakrishnan, S., Beale, M. H., Ward, J. L. and Strange, R. N. 2005. Chickpea wilt: identification and toxicity of 8-0 -methyl-fusarubin from Fusarium acutatum. Phytochemistry. 66, pp. 1536-1539. https://doi.org/10.1016/j.phytochem.2005.04.037
Cloning and expression of sesquiterpene synthase genes from Lettuce (Lactuca sativa L.)
A - Papers appearing in refereed journals
Bennett, M. H., Mansfield, J. W., Lewis, M. J. and Beale, M. H. 2002. Cloning and expression of sesquiterpene synthase genes from Lettuce (Lactuca sativa L.). Phytochemistry. 60, pp. 255-261.
Cloning and functional characterisation of a cis -muuroladiene synthase from black peppermint (Mentha x piperita) and direct evidence for a chemotype unable to synthesise farnesene
A - Papers appearing in refereed journals
Prosser, I. M., Adams, R. J., Beale, M. H., Hawkins, N. D., Phillips, A. L., Pickett, J. A. and Field, L. M. 2006. Cloning and functional characterisation of a cis -muuroladiene synthase from black peppermint (Mentha x piperita) and direct evidence for a chemotype unable to synthesise farnesene. Phytochemistry. 67, pp. 1564-1571. https://doi.org/10.1016/j.phytochem.2005.06.012
Co-ordinated expression of amino acid metabolism in response to N and S deficiency during wheat grain filling
A - Papers appearing in refereed journals
Howarth, J. R., Parmar, S., Jones, J., Shepherd, C. E., Corol, D. I., Galster, A. M., Hawkins, N. D., Miller, S. J., Baker, J. M., Verrier, P. J., Ward, J. L., Beale, M. H., Barraclough, P. B. and Hawkesford, M. J. 2008. Co-ordinated expression of amino acid metabolism in response to N and S deficiency during wheat grain filling. Journal of Experimental Botany. 59, pp. 3675-3689. https://doi.org/10.1093/jxb/ern218
Combined meta-genomics analyses unravel candidate genes for the grain dietary fiber content in bread wheat (Triticum aestivum L.)
A - Papers appearing in refereed journals
Quraishi, U. M., Murat, F., Abrouk, M., Pont, C., Confolent, C., Oury, F. X., Ward, J. L., Boros, D., Gebruers, K., Delcour, J. A., Courtin, C. M., Bedo, Z., Saulnier, L., Guillon, F., Balzergue, S., Shewry, P. R., Feuillet, C., Charmet, G. and Salse, J. 2011. Combined meta-genomics analyses unravel candidate genes for the grain dietary fiber content in bread wheat (Triticum aestivum L.). Functional and Integrative Genomics. 11, pp. 71-83. https://doi.org/10.1007/s10142-010-0183-2
Combined NMR and flow injection ESI-MS for Brassicaceae metabolomics
B - Book chapters etc edited externally
Baker, J. M., Ward, J. L. and Beale, M. H. 2012. Combined NMR and flow injection ESI-MS for Brassicaceae metabolomics. in: Hall, R. D. and Hardy, N. W. (ed.) Plant metabolomics: methods and protocols (Methods in Molecular Biology, vol. 860) Springer, New York. pp. 177-191
Combining bioactive components with conventional targets in plant breeding programmes
B - Book chapters etc edited externally
Bedo, Z., Rakszegi, M., Lang, L., Gebruers, K., Piironen, V., Lafiandra, D. and Phillips, A. L. 2010. Combining bioactive components with conventional targets in plant breeding programmes. in: Shewry, P. R. and Ward, J. L. (ed.) HEALTHGRAIN methods: analysis of bioactive components in small grain cereals American Association of Cereal Chemists (AACC), St Paul, MN. pp. 263-272
Comparative Compositions of Grain of Bread Wheat, Emmer and Spelt Grown with Different Levels of Nitrogen Fertilisation
A - Papers appearing in refereed journals
Lovegrove, A., Dunn, J., Pellny, T. K., Hood, J., Burridge, A. J., America, A. H. P., Gilissen, L., Timmer, R., Proos-Huijsmans, Z. A. M/, Van Straaten, J. P., Jonkers, D., Ward, J. L., Brouns, F. and Shewry, P. R. 2023. Comparative Compositions of Grain of Bread Wheat, Emmer and Spelt Grown with Different Levels of Nitrogen Fertilisation. Foods. 12 (4), p. 843. https://doi.org/10.3390/foods12040843
Comparative compositions of grain of tritordeum, durum wheat and bread wheat grown in multi-environment trials
A - Papers appearing in refereed journals
Shewry, P. R., Brouns, F., Dunn, J., Hood, J., Burridge, A. J., America, A. H. P., Gilissen, L., Proos-Huijsmans, Z. A. M., Van Straaten, J. P., Jonkers, D., Lazzeri, P. A., Ward, J. L. and Lovegrove, A. 2023. Comparative compositions of grain of tritordeum, durum wheat and bread wheat grown in multi-environment trials. Food Chemistry. 423 (15 Oct), p. 136312. https://doi.org/10.1016/j.foodchem.2023.136312
Comparative compositions of metabolites and dietary fibre components in doughs and breads produced from bread wheat, emmer and spelt and using yeast and sourdough processes.
A - Papers appearing in refereed journals
Shewry, P. R., America, A. H. P., Lovegrove, A., Wood, A., Plummer, A., Evans, J., Van den Broeck, H. C., Gilissen, L., Mumm, R., Ward, J. L., Proos, Z., Kuiper, P., Longin, C. F. H., Andersson, A. A. M., Van Straaten, J. P., Jonkers, D. and Brouns, F. 2021. Comparative compositions of metabolites and dietary fibre components in doughs and breads produced from bread wheat, emmer and spelt and using yeast and sourdough processes. Food Chemistry. 374 (16 April 2022), p. 131710. https://doi.org/10.1016/j.foodchem.2021.131710
Comparative Metabolomics and Molecular Phylogenetics of Melon (Cucumis melo, Cucurbitaceae) Biodiversity
A - Papers appearing in refereed journals
Ward, J. L., Moing, A., Allwood, J. W., Aharoni, A., Baker, J., Beale, M. H., Ben-Dor, S., Biais, B., Brigante, F., Burger, Y., Deborde, C., Erban, A., Faigenboim, A., Gur, A., Goodacre, R., Hansen, T. H., Jacob, D., Katzir, N., Kopka, J., Lewinsohn, E., Maucourt, M., Meir, S., Miller, S., Mumm, R., Oren, E., Paris, H. S., Rogachev, I., Rolin, D., Saar, U., Schjoerring, J. K., Tadmor, Y., Tzuri, G., Vos, R. C. D., Ward, J. L., Yeselson, E., Hall, R. D. and Schaffer, A. A. 2020. Comparative Metabolomics and Molecular Phylogenetics of Melon (Cucumis melo, Cucurbitaceae) Biodiversity. Metabolites. 10 (3), pp. 121-147. https://doi.org/10.3390/metabo10030121
Contents of dietary fibre components and their relation to associated bioactive components in whole grain wheat samples from the HEALTHGRAIN diversity screen
A - Papers appearing in refereed journals
Andersson, A. A. M., Andersson, R., Piironen, V., Lampi, A-M., Nystrom, L., Boros, D., Fras, A., Gebruers, K., Courtin, C. M., Delcour, J. A., Rakszegi, M., Bedo, Z., Ward, J. L., Shewry, P. R. and Aman, P. 2013. Contents of dietary fibre components and their relation to associated bioactive components in whole grain wheat samples from the HEALTHGRAIN diversity screen. Food Chemistry. 136 (3-4), pp. 1243-1248. https://doi.org/10.1016/j.foodchem.2012.09.074