PS: Resilience and Development

TitlePS: Resilience and Development
TypeResearch cluster

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Inhibition of SNF1-related protein kinase1 activity and regulation of metabolic pathways by trehalose-6-phosphate

A - Papers appearing in refereed journals
Zhang, Y., Primavesi, L. F., Jhurreea, D., Andralojc, P. J., Mitchell, R. A. C., Powers, S. J., Schluepmann, H., Delatte, T., Wingler, A. and Paul, M. J. 2009. Inhibition of SNF1-related protein kinase1 activity and regulation of metabolic pathways by trehalose-6-phosphate. Plant Physiology. 149 (4), pp. 1860-1871. https://doi.org/10.1104/pp.108.133934

A novel transcriptomic approach to identify candidate genes for grain quality traits in wheat

A - Papers appearing in refereed journals
Wan, Y., Toscano-Underwood, C., Toole, G., Skeggs, P., Zhu, T., Leverington, M., Griffiths, S., Wheeler, T., Gooding, M., Poole, R., Edwards, K. J., Gezan, S. A., Welham, S. J., Snape, J., Mills, E. N. C., Mitchell, R. A. C. and Shewry, P. R. 2009. A novel transcriptomic approach to identify candidate genes for grain quality traits in wheat. Plant Biotechnology Journal. 7 (5), pp. 401-410. https://doi.org/10.1111/j.1467-7652.2009.00405.x

Snf1-related protein kinases (SnRKs) act within an intricate network that links metabolic and stress signalling in plants

A - Papers appearing in refereed journals
Halford, N. G. and Hey, S. J. 2009. Snf1-related protein kinases (SnRKs) act within an intricate network that links metabolic and stress signalling in plants. Biochemical Journal. 419, pp. 247-259. https://doi.org/10.1042/BJ20082408

Puroindoline genes and proteins in tetraploid and hexaploid species of Triticum

A - Papers appearing in refereed journals
Rakszegi, M., Wilkinson, M. D., Tosi, P., Lovegrove, A., Kovacs, G., Bedo, Z. and Shewry, P. R. 2009. Puroindoline genes and proteins in tetraploid and hexaploid species of Triticum. Journal of Cereal Science. 49, pp. 202-211. https://doi.org/10.1016/j.jcs.2008.09.006

Effects of genotype and environment on free amino acid levels in wheat grain: implications for acrylamide formation during processing

A - Papers appearing in refereed journals
Curtis, T. Y., Muttucumaru, N., Shewry, P. R., Parry, M. A. J., Powers, S. J., Elmore, J. S., Mottram, D. S., Hook, S. and Halford, N. G. 2009. Effects of genotype and environment on free amino acid levels in wheat grain: implications for acrylamide formation during processing. Journal of Agricultural and Food Chemistry - JAFC. 57, pp. 1013-1021. https://doi.org/10.1021/jf8031292

Modification of gibberellin signalling (metabolism and signal transduction) in sugar beet: analysis of potential targets for crop improvement

A - Papers appearing in refereed journals
Mutasa-Göttgens, E. S., Qi, A., Mathews, A. M., Thomas, S. G., Phillips, A. L. and Hedden, P. 2009. Modification of gibberellin signalling (metabolism and signal transduction) in sugar beet: analysis of potential targets for crop improvement. Transgenic Research. 18, pp. 301-308. https://doi.org/10.1007/s11248-008-9211-6

TILLING for improved crop performance under stress conditions

C1 - Edited contributions to conferences/learned societies
Parry, M. A. J., Madgwick, P. J., Bayon, C., Habash, D., Baudo, M., Tuberosa, R., Bort, J., Ben Haj Salah, H., Slafer, G., Al-Yassin, A., Ouabbou, H., Labihili, M., Natchit, M. and Phillips, A. L. 2008. TILLING for improved crop performance under stress conditions. Effects of Climate Change on Plants: Implications for Agriculture. Aspects of Applied Biology 88 . Association of Applied Biologists (AAB) Wellesbourne Warwick . pp. 111

Improving wheat for nutrition and processing

C1 - Edited contributions to conferences/learned societies
Shewry, P. R., Wan, Y., Wheeler, T., Gooding, M., Poole, R., Edwards, K. J., Mills, E. N. C., Skeggs, P., Gezan, S., Welham, S. J., Shenton, C., Zhu, T., Phillips, A. L., Jones, H. D., Li, L., Ward, J. L., Freeman, J., Nemeth, C. and Mitchell, R. A. C. 2008. Improving wheat for nutrition and processing. Molinacano, J. L. (ed.) Cereal Science and Technology for Feeding Ten Billion People: Genomics Era and Beyond. Proceedings of the Meeting of the Eucarpia Cereal Section, Lleida (Spain), 13-17 November 2006 . Options Mediterraneennes, Series A, No 81. pp. 249-252

Manipulation of the cell wall composition of wheat endosperm cell walls to improve nutritional properties

C1 - Edited contributions to conferences/learned societies
Nemeth, C., Freeman, J., Mitchell, R. A. C. and Shewry, P. R. 2008. Manipulation of the cell wall composition of wheat endosperm cell walls to improve nutritional properties. Molinacano, J. L. (ed.) Cereal Science and Technology for Feeding Ten Billion People: Genomics Era and Beyond. Proceedings of the Meeting of the Eucarpia Cereal Section, Lleida (Spain), 13-17 November 2006 . Options Mediterraneennes, Series A, No 81. pp. 295-297

Effects of climate change on plants: implications for agriculture. Aspects of Applied Biology 88

E - Books edited/written by staff member, alone/with others
Halford, N. G., Jones, H. D. and Lawlor, D. W. 2008. Effects of climate change on plants: implications for agriculture. Aspects of Applied Biology 88. Association of Applied Biologists, Wellesbourne.

Arabidopsis sucrose non-fermenting-1-related protein kinase-1 and calcium-dependent protein kinase phosphorylate conserved target sites in ABA response element binding proteins

A - Papers appearing in refereed journals
Zhang, Y., Andralojc, P. J., Hey, S. J., Primavesi, L. F., Specht, M., Koehler, J., Parry, M. A. J. and Halford, N. G. 2008. Arabidopsis sucrose non-fermenting-1-related protein kinase-1 and calcium-dependent protein kinase phosphorylate conserved target sites in ABA response element binding proteins. Annals of Applied Biology - AAB. 153 (3), pp. 401-409. https://doi.org/10.1111/j.1744-7348.2008.00302.x

Establishing substantial equivalence: transcriptomics

B - Book chapters etc edited externally
Baudo, M. M., Powers, S. J. and Mitchell, R. A. C. 2008. Establishing substantial equivalence: transcriptomics. in: Shewry, P. R. and Jones, H. D. (ed.) Transgenic wheat, barley and oats. Methods in molecular biology, vol. 478 Humana Press, New York. pp. 247-272

Identification and genetic mapping of variant forms of puroindoline b expressed in developing wheat grain

A - Papers appearing in refereed journals
Wilkinson, M. D., Wan, Y., Tosi, P., Leverington, M., Snape, J., Mitchell, R. A. C. and Shewry, P. R. 2008. Identification and genetic mapping of variant forms of puroindoline b expressed in developing wheat grain. Journal of Cereal Science. 48, pp. 722-728. https://doi.org/10.1016/j.jcs.2008.03.007

Genetic analysis reveals that C19-GA 2-oxidation is a major gibberellin inactivation pathway in Arabidopsis

A - Papers appearing in refereed journals
Rieu, I., Eriksson, S., Powers, S. J., Gong, F., Griffiths, J., Woolley, L., Benlloch, R., Nilsson, O., Thomas, S. G., Hedden, P. and Phillips, A. L. 2008. Genetic analysis reveals that C19-GA 2-oxidation is a major gibberellin inactivation pathway in Arabidopsis. The Plant Cell. 20, pp. 2420-2436. https://doi.org/10.1105/tpc.108.058818

Reduced gibberellin response affects ethylene biosynthesis and responsiveness in the Arabidopsis gai eto2-1 double mutant

A - Papers appearing in refereed journals
De Grauwe, L., Chaerle, L., Dugardeyn, J., Decat, J., Rieu, I., Vriezen, W. H., Moritz, T., Beemster, G. T. S., Phillips, A. L., Harberd, N. P., Hedden, P. and Van Der Straeten, D. 2008. Reduced gibberellin response affects ethylene biosynthesis and responsiveness in the Arabidopsis gai eto2-1 double mutant. New Phytologist. 177 (2), pp. 128-141. https://doi.org/10.1111/j.1469-8137.2007.02263.x

Understanding the relationship between DNA methylation and phenotypic plasticity in crop plants

C2 - Non-edited contributions to conferences
Amoah, S., Wilkinson, M. D., Dunwell, J. and King, G. J. 2008. Understanding the relationship between DNA methylation and phenotypic plasticity in crop plants. https://doi.org/10.1016/j.cbpa.2008.04.364

Integration of leaf metabolism and physiology by the trehalose pathway

C2 - Non-edited contributions to conferences
Paul, M. J., Jhurreea, D., Primavesi, L. F., Zhang, Y., Sivagnanam, T. and Wingler, A. 2008. Integration of leaf metabolism and physiology by the trehalose pathway. https://doi.org/10.1016/j.cbpa.2008.04.538

Adopting an integrative systems biology approach to study root growth and development

C2 - Non-edited contributions to conferences
Bennett, M., French, A., Hodgman, C., Hedden, P., Holman, T., Middleton, A., King, J., Owen, M., Pridmore, T., Swarup, R., Thomas, S. G., Ubeda-Tomas, S. and Wilson, M. 2008. Adopting an integrative systems biology approach to study root growth and development. https://doi.org/10.1016/j.cbpa.2008.04.022

GCN2-dependent phosphorylation of eukaryotic translation initiation factor 2-alpha in Arabidopsis

A - Papers appearing in refereed journals
Zhang, Y., Wang, Y., Kanyuka, K., Parry, M. A. J., Powers, S. J. and Halford, N. G. 2008. GCN2-dependent phosphorylation of eukaryotic translation initiation factor 2-alpha in Arabidopsis. Journal of Experimental Botany. 59 (11), pp. 3131-3141. https://doi.org/10.1093/jxb/ern169

Trehalose 6-phosphate, a novel protein kinase inhibitor

C2 - Non-edited contributions to conferences
Primavesi, L. F., Lovegrove, A., Childs, R. A., Feizi, T., Patel, M., Davis, B. G. and Paul, M. J. 2008. Trehalose 6-phosphate, a novel protein kinase inhibitor. Abstracts SCIBS Meeting, 6-10 July 2008 .

Trehalose 6-phosphate makes sugar sense

C2 - Non-edited contributions to conferences
Primavesi, L. F., Jhurreea, D., Zhang, Y., Andralojc, P. J., Wingler, A. and Paul, M. J. 2008. Trehalose 6-phosphate makes sugar sense. https://doi.org/10.1016/j.cbpa.2008.04.525

The wheat GCN2 signalling pathway: does this kinase play an important role in stress signalling?

C2 - Non-edited contributions to conferences
Byrne, E., Wingler, A., Muttucumaru, N. and Halford, N. G. 2008. The wheat GCN2 signalling pathway: does this kinase play an important role in stress signalling? https://doi.org/10.1016/j.cbpa.2008.04.410

Reducing acrylamide precursors in raw materials derived from wheat and potato

A - Papers appearing in refereed journals
Muttucumaru, N., Elmore, J. S., Curtis, T., Mottram, D. S., Parry, M. A. J. and Halford, N. G. 2008. Reducing acrylamide precursors in raw materials derived from wheat and potato. Journal of Agricultural and Food Chemistry - JAFC. 56, pp. 6167-6172. https://doi.org/10.1021/jf800279d

Effects of plant sulfur nutrition on acrylamide and aroma compounds in cooked wheat

A - Papers appearing in refereed journals
Elmore, J. S., Parker, J. K., Halford, N. G., Muttucumaru, N. and Mottram, D. S. 2008. Effects of plant sulfur nutrition on acrylamide and aroma compounds in cooked wheat. Journal of Agricultural and Food Chemistry - JAFC. 56, pp. 6173-6179. https://doi.org/10.1021/jf0730441

The sensitivity of photosynthesis to phosphorus deficiency differs between C3 and C4 tropical grasses

A - Papers appearing in refereed journals
Ghannoum, O., Paul, M. J., Ward, J. L., Beale, M. H., Corol, D. I. and Conroy, J. P. 2008. The sensitivity of photosynthesis to phosphorus deficiency differs between C3 and C4 tropical grasses. Functional Plant Biology. 35, pp. 213-221. https://doi.org/10.1071/FP07256

Transcriptome analysis of grain development in hexaploid wheat

A - Papers appearing in refereed journals
Wan, Y., Poole, R. L., Huttly, A. K., Toscano-Underwood, C., Feeney, K., Welham, S. J., Gooding, M. J., Mills, C., Edwards, K. J., Shewry, P. R. and Mitchell, R. A. C. 2008. Transcriptome analysis of grain development in hexaploid wheat. BMC Genomics. 9, p. 121 (16pp). https://doi.org/10.1186/1471-2164-9-121

Growth hormones for increased wheat yield?

G - Articles in popular magazines and other technical publications
Phillips, A. L. 2008. Growth hormones for increased wheat yield? RRA Newsletter. 26, p. 4.

The gibberellin biosynthetic genes AtGA20ox1 and AtGA20ox2 act, partially redundantly, to promote growth and development throughout the Arabidopsis lifecycle

A - Papers appearing in refereed journals
Rieu, I., Ruiz-Rivero, O., Fernandez-Garcia, N., Griffiths, J., Powers, S. J., Gong, F., Linhartova, T., Eriksson, S., Nilsson, O., Thomas, S. G., Phillips, A. L. and Hedden, P. 2008. The gibberellin biosynthetic genes AtGA20ox1 and AtGA20ox2 act, partially redundantly, to promote growth and development throughout the Arabidopsis lifecycle. The Plant Journal. 53 (3), pp. 488-504. https://doi.org/10.1111/j.1365-313X.2007.03356.x

Over-expression of a gibberellin 2-oxidase gene from Phaseolus coccineus L. enhances gibberellin inactivation and induces dwarfism in Solanum species

A - Papers appearing in refereed journals
Dijkstra, C., Adams, E., Bhattacharya, A., Page, A. F., Anthony, P., Kourmpetli, S., Power, J. B., Lowe, K. C., Thomas, S. G., Hedden, P., Phillips, A. L. and Davey, M. R. 2008. Over-expression of a gibberellin 2-oxidase gene from Phaseolus coccineus L. enhances gibberellin inactivation and induces dwarfism in Solanum species. Plant Cell Reports. 27, pp. 463-470. https://doi.org/10.1007/s00299-007-0471-z

Trehalose metabolism and signaling

A - Papers appearing in refereed journals
Paul, M. J., Primavesi, L. F., Jhurreea, D. and Zhang, Y. 2008. Trehalose metabolism and signaling. Annual Review of Plant Biology. 59, pp. 417-441. https://doi.org/10.1146/annurev.arplant.59.032607.092945

Trelahose 6-phosphate: a signal of sucrose status

A - Papers appearing in refereed journals
Paul, M. J. 2008. Trelahose 6-phosphate: a signal of sucrose status. Biochemical Journal. 412, pp. e1-e2. https://doi.org/10.1042/BJ20080598

Plant biotechnology: transgenic crops

B - Book chapters etc edited externally
Shewry, P. R., Jones, H. D. and Halford, N. G. 2008. Plant biotechnology: transgenic crops. in: Stahl, U., Donalies, U. E. B. and Nevoigt, E. (ed.) Food Biotechnology Springer International Publishing Ag.

Genetic modification of plant stature by manipulation of gibberellin metabolism: an alternative to chemical growth regulators

C2 - Non-edited contributions to conferences
Bhattacharya, A., Davey, M., Power, B., Ward, D. A., Phillips, A. L. and Hedden, P. 2007. Genetic modification of plant stature by manipulation of gibberellin metabolism: an alternative to chemical growth regulators. https://doi.org/10.1016/j.cbpa.2007.01.623

Trehalose signalling: understanding and exploiting an emerging small molecule paradigm

C2 - Non-edited contributions to conferences
Primavesi, L. F., Errey, J. C., Santos, R., Childs, R. A., Chai, W., Davis, B. G., Feizi, T. and Paul, M. J. 2007. Trehalose signalling: understanding and exploiting an emerging small molecule paradigm. Abstracts 4th BBSRC SCIBS Grantholders' Workshop, Manchester, 24-25 September 2007 .

Ethylene-induced Arabidopsis hypocotyl elongation is dependent on but not mediated by gibberellins

A - Papers appearing in refereed journals
Vandenbussche, F., Vancompernolle, B., Rieu, I., Ahmad, M., Phillips, A. L., Moritz, T., Hedden, P. and Van Der Straeten, D. 2007. Ethylene-induced Arabidopsis hypocotyl elongation is dependent on but not mediated by gibberellins. Journal of Experimental Botany. 58, pp. 4269-4281. https://doi.org/10.1093/jxb/erm288

Triticum monococcum as a reference species for wheat genetics and genomics

C2 - Non-edited contributions to conferences
Jing, H-C., Bayon, C., Gutteridge, R., Kornyukhin, D., Kanyuka, K., Orford, S., Zlatska, A., Mitrofanova, O. P., Phillips, A. L. and Hammond-Kosack, K. E. 2007. Triticum monococcum as a reference species for wheat genetics and genomics. Abstracts 4th UK Small Grain Cereal Genetics and Genomics Workshop: From Genes to Traits, Cambridge, 14-16 March 2007 .

Decreased shoot stature and grain alpha-amylase activity following ectopic expression of a gibberellin 2-oxidase gene in transgenic wheat

A - Papers appearing in refereed journals
Appleford, N. E., Wilkinson, M. D., Ma, Q., Evans, D. J., Stone, M. C., Pearce, S. P., Powers, S. J., Thomas, S. G., Jones, H. D., Phillips, A. L., Hedden, P. and Lenton, J. R. 2007. Decreased shoot stature and grain alpha-amylase activity following ectopic expression of a gibberellin 2-oxidase gene in transgenic wheat. Journal of Experimental Botany. 58, pp. 3213-3226. https://doi.org/10.1093/jxb/erm166

Responses to water withdrawal of tobacco plants genetically engineered with the AtTPS1 gene: a special reference to photosynthetic parameters

A - Papers appearing in refereed journals
Almeida, A. M., Silva, A. B., Araujo, S. S., Cardoso, L. A., Santos, D. M., Torne, J. M., Silva, J. M., Paul, M. J. and Fevereiro, P. S. 2007. Responses to water withdrawal of tobacco plants genetically engineered with the AtTPS1 gene: a special reference to photosynthetic parameters. Euphytica. 154, pp. 113-126. https://doi.org/10.1007/s10681-006-9277-2

Transcriptome profiling of wheat genotypes differing in bread making quality under different environments

C2 - Non-edited contributions to conferences
Wan, Y., Mitchell, R. A. C., Leverington, M., Griffiths, S., Snape, J., Wheeler, T., Gooding, M., Poole, R., Edwards, K., Mills, C., Skeggs, P., Gezan, S., Welham, S. J., Shenton, C., Zhu, T. and Shewry, P. R. 2007. Transcriptome profiling of wheat genotypes differing in bread making quality under different environments. Abstracts 4th UK Small Grain Cereals Genetic and Genomics Workshop: From Genes to Traits, Cambridge, 14-16 March 2007 .

Isolation and characterization of Viviparous-1 genes in wheat cultivars with distinct ABA sensitivity and pre-harvest sprouting tolerance

A - Papers appearing in refereed journals
Yang, Y., Ma, Y. Z., Xu, Z. S., Chen, X. M., He, Z. H., Yu, Z., Wilkinson, M. D., Jones, H. D., Shewry, P. R. and Xia, L-Q. 2007. Isolation and characterization of Viviparous-1 genes in wheat cultivars with distinct ABA sensitivity and pre-harvest sprouting tolerance. Journal of Experimental Botany. 58, pp. 2863-2871. https://doi.org/10.1093/jxb/erm073

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