Biointeractions and Crop Protection

TitleBiointeractions and Crop Protection
TypeScience Department
InstituteRothamsted Research
HeadLin Field
Executive AssistantSheila Bishop

Outputs

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Towards a new phenotype for tick resistance in beef and dairy cattle : a review

A - Papers appearing in refereed journals
Burrow, H. M., Mans, B. J., Cardoso, F. F., Birkett, M. A., Kotze, A. C., Hayes, B. J., Mapholi, N., Dzama, K., Marufu, M. C., Githaka, N. F. and Djikeng, A. 2019. Towards a new phenotype for tick resistance in beef and dairy cattle : a review. Animal Production Science. 59 (8), pp. 1401-1427.

Quantifying the hidden costs of imperfect detection for early detection surveillance

A - Papers appearing in refereed journals
Mastin, A. J., Van Den Bosch, F., Van Den Berg, F. and Parnell, S. R. 2019. Quantifying the hidden costs of imperfect detection for early detection surveillance. Philosophical Transactions of the Royal Society B-Biological Sciences. 374 (1776).

Multifunctionalizing the marine diatom Phaeodactylum tricornutum for sustainable co-production of omega-3 long chain polyunsaturated fatty acids and recombinant phytase

A - Papers appearing in refereed journals
Pudney, A., Gandini, C., Economou, C., Smith, Richard T., Goddard, P., Napier, J. A., Spicer, A. and Sayanova, O. V. 2019. Multifunctionalizing the marine diatom Phaeodactylum tricornutum for sustainable co-production of omega-3 long chain polyunsaturated fatty acids and recombinant phytase. Scientific Reports. 9 (1), p. 11444.

Characteristics and distribution of Colletotrichum species in coffee plantations in Hainan, China

A - Papers appearing in refereed journals
Cao, X. R., Xu, X. M., Che, H. Y., West, J. S. and Luo, D. Q. 2019. Characteristics and distribution of Colletotrichum species in coffee plantations in Hainan, China. Plant Pathology. 68 (6), pp. 1146-1156.

sRNA profiling combined with gene function analysis reveals a lack of evidence for cross-kingdom RNAi in the wheat – Zymoseptoria tritici pathosystem

A - Papers appearing in refereed journals
Kettles, G. J., Hofinger, B. J., Hu, P., Bayon, C., Rudd, J. J., Balmer, D., Courbot, M., Hammond-Kosack, K. E., Scalliet, G. and Kanyuka, K. 2019. sRNA profiling combined with gene function analysis reveals a lack of evidence for cross-kingdom RNAi in the wheat – Zymoseptoria tritici pathosystem. Frontiers in Plant Science. 10 (892).

Translating surveillance data into incidence estimates

A - Papers appearing in refereed journals
Bourhis, Y., Gotwald, T. R. and Van Den Bosch, F. 2019. Translating surveillance data into incidence estimates. Philosophical Transactions of the Royal Society B-Biological Sciences. 374 (1776).

First application of loop-mediated isothermal amplification (LAMP) assays for rapid identification of mating type in the heterothallic fungus Aspergillus fumigatus

A - Papers appearing in refereed journals
King, K. M., Hawkins, N. J., Atkins, S. L., Dyer, P. S., West, J. S. and Fraaije, B. A. 2019. First application of loop-mediated isothermal amplification (LAMP) assays for rapid identification of mating type in the heterothallic fungus Aspergillus fumigatus . Mycoses.

Alterations in life-history associated with non-target-site herbicide resistance in Alopecurus myosuroides

A - Papers appearing in refereed journals
Comont, D., Knight, C., Crook, L., Hull, R. I., Beffa, R. and Neve, P. 2019. Alterations in life-history associated with non-target-site herbicide resistance in Alopecurus myosuroides. Frontiers in Plant Science. 10.

Structural and biochemical evaluation of Ceratitis capitata odorant-binding protein 22 affinity for odorants involved in intersex communication

A - Papers appearing in refereed journals
Falchetto, M., Ciossani, G., Scolari, F., Di Cosimo, A., Nenci, S., Field, L. M., Mattevi, A., Zhou, J-J., Gasperi, G. and Forneris, F. 2019. Structural and biochemical evaluation of Ceratitis capitata odorant-binding protein 22 affinity for odorants involved in intersex communication . Insect Molecular Biology. 28 (3), pp. 431-443.

Identification and functional characterisation of a novel N-cyanoamidine neonicotinoid metabolising cytochrome P450, CYP9Q6, from the buff-tailed bumblebee Bombus terrestris

A - Papers appearing in refereed journals
Troczka, B. J., Homem, R. A., Reid, R., Beadle, K., Kohler, M, Zaworra, M, Field, L. M., Williamson, M. S., Nauen, R., Bass, C. and Davies, T. G. E. 2019. Identification and functional characterisation of a novel N-cyanoamidine neonicotinoid metabolising cytochrome P450, CYP9Q6, from the buff-tailed bumblebee Bombus terrestris. Insect Biochemistry and Molecular Biology. 111 (103171).

First evidence of retained sexual capacity and survival in the pyrethroid resistant Sitobion avenae (F.) (Hemiptera: Aphididae) SA3 super-clone following exposure to a pyrethroid at current field-rate.

A - Papers appearing in refereed journals
Walsh, L. E., Gaffney, M. T., Malloch, G. L., Foster, S. P., Williamson, M. S., Mangan, R. and Purvis, G. 2019. First evidence of retained sexual capacity and survival in the pyrethroid resistant Sitobion avenae (F.) (Hemiptera: Aphididae) SA3 super-clone following exposure to a pyrethroid at current field-rate. Irish Journal of Agricultural and Food Research. 58 (1), pp. 21-26.

The evolution of multiple-insecticide resistance in UK populations of tomato leafminer, Tuta absoluta

A - Papers appearing in refereed journals
Grant, C., Jacobson, R., Ilias, A., Berger, M., Vasakis, E., Bielza, P., Zimmer, C. T., Williamson, M. S., Ffrench-Constant, R. H., Vontas, J., Roditakis, E. and Bass, C. 2019. The evolution of multiple-insecticide resistance in UK populations of tomato leafminer, Tuta absoluta. Pest Management Science.

Non-canonical fungal G-protein coupled receptors promote Fusarium head blight on wheat

A - Papers appearing in refereed journals
Dilks, T., Halsey, K., De Vos, R., Hammond-Kosack, K. E. and Brown, N. A. 2019. Non-canonical fungal G-protein coupled receptors promote Fusarium head blight on wheat. PLOS Pathogens. 15 (4), p. e1007666.

WGIN Stakeholders' Newsletter [April 2019]

G - Articles in popular magazines and other technical publications
Hammond-Kosack, K. E., Riche, A. B., Mcmillan, V. E., Aradottir, G. I., Hammond-Kosack, M., Lister, C. and Griffiths, S. 2019. WGIN Stakeholders' Newsletter [April 2019]. Department for Environment, Food and Rural Affairs (DEFRA).

Ecological traits predict population changes in moths

A - Papers appearing in refereed journals
Coulthard, E., Norrey, J., Shortall, C. R. and Harris, W. E. 2019. Ecological traits predict population changes in moths. Biological Conservation. 233, pp. 213-219.

Trends and indicators for quantifying moth abundance and occupancy in Scotland

A - Papers appearing in refereed journals
Dennis, E. B., Brereton, T. M., Morgan, B. J. T., Fox, R., Shortall, C. R., Prescott, T. and Foster, S. 2019. Trends and indicators for quantifying moth abundance and occupancy in Scotland. Journal of Insect Conservation.

Analysis of small RNAs in the Zymoseptoria tritici – wheat interaction

C2 - Non-edited contributions to conferences
Kettles, G. J., Hofinger, B. J., Hu, P., Bayon, C., Rudd, J. J., Balmer, D., Courbot, M., Hammond-Kosack, K. E., Scalliet, G. and Kanyuka, K. 2019. Analysis of small RNAs in the Zymoseptoria tritici – wheat interaction. 30th Fungal Genetics Conference. Pacific Grove, California, USA 12 Mar 2019

RNA interference-mediated knockdown of voltage-gated sodium channel (MpNav) gene causes mortality in peach-potato aphid, Myzus persicae

A - Papers appearing in refereed journals
Tariq, K., Ali, A., Davies, T. G. E., Naz, E., Naz, L., Sohail, S., Hou, M. and Ullah, F. 2019. RNA interference-mediated knockdown of voltage-gated sodium channel (MpNav) gene causes mortality in peach-potato aphid, Myzus persicae. Scientific Reports. 9 (1), p. 5291.

GCR1 and GPA1 coupling regulates nitrate, cell wall, immunity and light responses in Arabidopsis

A - Papers appearing in refereed journals
Chakraborty, N., Kanyuka, K., Kumar Jaiswal, D., Kumar, A., Arora, V., Malik, A., Gupta, N., Hooley, R. and Raghuram, N. 2019. GCR1 and GPA1 coupling regulates nitrate, cell wall, immunity and light responses in Arabidopsis. Scientific Reports. 9, p. 5838.

The Arabidopsis RRM domain protein EDM3 mediates race-specific disease resistance by controlling H3K9me2-dependent alternative polyadenylation of RPP7 immune receptor transcripts.

A - Papers appearing in refereed journals
Lai, Y., Cuzick, A., Lu, X., Wang, J., Katiyar, N., Tsuchiya, T., Le Roch, K., McDowell, J., Holub, E. and Eulgem, T. 2019. The Arabidopsis RRM domain protein EDM3 mediates race-specific disease resistance by controlling H3K9me2-dependent alternative polyadenylation of RPP7 immune receptor transcripts. The Plant Journal. 97 (4), pp. 646-660.

Evolutionary epidemiology predicts the emergence of glyphosate resistance in a major agricultural weed

A - Papers appearing in refereed journals
Comont, D., Hicks, H., Crook, L., Hull, R. I., Cocciantelli, E., Hadfield, J., Childs, D., Freckleton, R. and Neve, P. 2019. Evolutionary epidemiology predicts the emergence of glyphosate resistance in a major agricultural weed. New Phytologist.

Using virulence mutants to identify Avr genes in the wheat stem rust fungus, Puccinia graminis f. sp. tritici

C2 - Non-edited contributions to conferences
Dodds, P., Upadhyaya, N., Ortiz, D., Li, F., Chen, J., Miller, M., Luo, M., Mago, R., Ellis, J., Sperschneider, J., Nguyen-Phuc, H., Bouton, C., Steffenson, B., Hirsch, C., Silverstein, K., Park, R., Kanyuka, K. and Figueroa, M. 2019. Using virulence mutants to identify Avr genes in the wheat stem rust fungus, Puccinia graminis f. sp. tritici. 30th Fungal Genetics Conference. Pacific Grove, California, USA 12 Mar 2019

Movement Ecology of Pest Helicoverpa: Implications for Ongoing Spread

A - Papers appearing in refereed journals
Jones, C. M., Parry, H., Tay, W. T., Reynolds, D. R. and Chapman, J. W. 2019. Movement Ecology of Pest Helicoverpa: Implications for Ongoing Spread. Annual Review of Entomology. 64, pp. 277-295.

Pathogen Population Biology Research can Reduce International Threats to Tree Health Posed by Invasive Fungi

A - Papers appearing in refereed journals
King, K. M. 2019. Pathogen Population Biology Research can Reduce International Threats to Tree Health Posed by Invasive Fungi. Outlooks on Pest Management. 30 (1), pp. 5-9.

Identification of a non-host semiochemical from tick-resistant donkeys (Equus asinus) against Amblyomma sculptum ticks

A - Papers appearing in refereed journals
Ferreira, L. L., Sarria, A. L. F., De Olivera Filho, J. G., De Olivera de Silva, F., Powers, S. J., Caulfield, J. C., Pickett, J. A., Birkett, M. A. and Borges, L. M. F. 2019. Identification of a non-host semiochemical from tick-resistant donkeys (Equus asinus) against Amblyomma sculptum ticks. Ticks and Tick-Borne Diseases. 10 (3), pp. 621-627.

Genomic insight into neonicotinoid sensitivity in the solitary bee Osmia bicornis

A - Papers appearing in refereed journals
Beadle, K., Singh, K. S., Troczka, B. J., Randall, E., Zaworra, M., Zimmer, C. T., Hayward, A., Reid, R., Kor, L., Kohler, M., Buer, B., Nelson, D. R., Williamson, M. S., Davies, T. G. E., Field, L. M., Nauen, R. and Bass, C. 2019. Genomic insight into neonicotinoid sensitivity in the solitary bee Osmia bicornis. PLOS Genetics. 15 (2), p. e1007903.

Function and pharmacology of glutamate-gated chloride channel exon 9 splice variants from the diamondback moth Plutella xylostella

A - Papers appearing in refereed journals
Wang, X., O´Reilly, A. O., Williamson, M. S., Puinean, A. M., Yang, Y., Wu, S. and Wu, Y. 2019. Function and pharmacology of glutamate-gated chloride channel exon 9 splice variants from the diamondback moth Plutella xylostella. Insect Biochemistry and Molecular Biology. 104, pp. 58-64.

The regulation of three new members of the cytochrome P450 CYP6 family and their promoters in the cotton aphid Aphis gossypii by plant allelochemicals

A - Papers appearing in refereed journals
Li, F., Ma, K., Chen, X., Zhou, J-J. and Gao, X. 2019. The regulation of three new members of the cytochrome P450 CYP6 family and their promoters in the cotton aphid Aphis gossypii by plant allelochemicals. Pest Management Science. 75 (1), pp. 152-159.

Spatial and habitat variation in aphid, butterfly, moth and bird phenologies over the last half century

A - Papers appearing in refereed journals
Bell, J. R., Botham, M. S., Henrys, P. A., Leech, D. I., Pearce-Higgins, J. W., Shortall, C. R., Brereton, T. M., Pickup, J. and Thackeray, S. J. 2019. Spatial and habitat variation in aphid, butterfly, moth and bird phenologies over the last half century. Global Change Biology. 25 (6), pp. 1982-1994.

Characterisation of major genes mediating resistance to Septoria tritici blotch disease in wheat.

Conference poster
Tidd, H., Bryant, R and Kanyuka, K. 2019. Characterisation of major genes mediating resistance to Septoria tritici blotch disease in wheat. International Symposium on Cereal Leaf Blights 2019. University College Dublin, Dublin, Ireland 22 May 2019

Digest: Plant-pathogen coevolution extends to shifts in plant breeding systems

A - Papers appearing in refereed journals
Hawkins, N. J. 2019. Digest: Plant-pathogen coevolution extends to shifts in plant breeding systems. Evolution. 73 (3), pp. 628-629.

Two common invertebrate predators show varying responses to different types of sentinel prey in a mesocosm study

A - Papers appearing in refereed journals
Greenop, A., Cecelja, A., Woodcock, B. A., Wilby, A., Cook, S. M. and Pywell, R. F. 2019. Two common invertebrate predators show varying responses to different types of sentinel prey in a mesocosm study. Journal of Applied Entomology. 143 (4), pp. 380-386.

Cell surface immune receptors: the guardians of the plant’s extracellular spaces

A - Papers appearing in refereed journals
Kanyuka, K. and Rudd, J. J. 2019. Cell surface immune receptors: the guardians of the plant’s extracellular spaces. Current Opinion in Plant Biology. 50, pp. 1-8.

The role of photoprotection in disease resistance to Septoria tritici blotch in wheat

C2 - Non-edited contributions to conferences
Angelopoulou, D., Kanyuka, K., Murchie, E. and Ray, R. 2019. The role of photoprotection in disease resistance to Septoria tritici blotch in wheat. International Symposium on Cereal Leaf Blights 2019. University College Dublin, Dublin, Ireland 22 May 2019

Knocking down wheat meiotic genes through Virus-induced gene-silencing (VIGS)

C2 - Non-edited contributions to conferences
Desjardins, S., Kanyuka, K. and Higgins, J. D. 2019. Knocking down wheat meiotic genes through Virus-induced gene-silencing (VIGS). The Plant and Animal Genome XXVII Conference (PAG). San Diego, CA, USA 12 Jan 2019

MSH2 is required for obligate crossover formation in wheat

C2 - Non-edited contributions to conferences
Ogle, D., Desjardins, S., Gutterman, I., Simmonds, J., Uauy, C., Kanyuka, K. and Higgins, J. D. 2019. MSH2 is required for obligate crossover formation in wheat. The Plant and Animal Genome XXVII Conference (PAG). San Diego, CA, USA 12 Jan 2019

Sampling for disease absence-deriving informed monitoring from epidemic traits

A - Papers appearing in refereed journals
Bourhis, Y., Gottwald, T.R., Lopez-Ruiz, F.J., Patarapuwadol, S. and Van Den Bosch, F. 2019. Sampling for disease absence-deriving informed monitoring from epidemic traits. Journal of Theoretical Biology. 461, pp. 8-16.

A loop-mediated isothermal amplification (LAMP) assay for rapid and specific detection of airborne inoculum of Uromyces betae (sugar beet rust)

A - Papers appearing in refereed journals
Kaczmarek, A. M., King, K. M., West, J. S., Stevens, M., Sparkes, D. and Dickinson, M. 2019. A loop-mediated isothermal amplification (LAMP) assay for rapid and specific detection of airborne inoculum of Uromyces betae (sugar beet rust). Plant Disease.

Extension of Partial Gene Transcripts by Iterative Mapping of RNA-Seq Raw Reads

A - Papers appearing in refereed journals
Singh, K. S., Troczka, B. J., Beadle, K., Field, L. M., Davies, T. G. E., Williamson, M. S., Nauen, R and Bass, C. 2019. Extension of Partial Gene Transcripts by Iterative Mapping of RNA-Seq Raw Reads. IEEE-ACM Transactions on Computational Biology and Bioinformatics. 16 (3), pp. 1036-1041.

Development of pull and push-pull systems for management of Lesser Mealworm, Alphitobius diaperinus, in poultry houses using alarm and aggregation pheromones

A - Papers appearing in refereed journals
Hassemer, M., Borges, M., Withall, D., Pickett, J. A., Laumann, R. A., Birkett, M. A. and Blassioli-Moraes, M. C. 2019. Development of pull and push-pull systems for management of Lesser Mealworm, Alphitobius diaperinus, in poultry houses using alarm and aggregation pheromones. Pest Management Science. 75 (4), pp. 1107-1114.

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