BCP: Surveillance and Monitoring
| Title | BCP: Surveillance and Monitoring |
|---|---|
| Type | Research cluster |
Outputs
Sort by: Date Title
Covid-19: dogma over potential for prolonged droplet dispersal in air
A - Papers appearing in refereed journals
West, J. S. and Perryman, S. A. M. 2020. Covid-19: dogma over potential for prolonged droplet dispersal in air. Frontiers in public health. 8, p. 551836. https://doi.org/10.3389/fpubh.2020.551836
Rothamsted Insect Survey, Moth and Aphid catch abundance data
N - Datasets
Bell, J. R., Blumgart, D. and Shortall, C. R. 2020. Rothamsted Insect Survey, Moth and Aphid catch abundance data. Rothamsted Research. https://doi.org/10.23637/rothamsted.975qz
A diagnostic real-time PCR assay for the rapid identification of the tomato-potato psyllid, Bactericera cockerelli (Šulc, 1909) and development of a psyllid barcoding database
A - Papers appearing in refereed journals
Sumner-Kalkun, J. C., Sjolund, M. J., Arnsdorf, Y. M., Carnegie, M., Highet, F., Ouvrard, D., Greenslade, A. F. C., Bell, J. R., Sigvald, R. and Kenyon, D. M. 2020. A diagnostic real-time PCR assay for the rapid identification of the tomato-potato psyllid, Bactericera cockerelli (Šulc, 1909) and development of a psyllid barcoding database. PLOS ONE. 15 (3), p. e0230741. https://doi.org/10.1371/journal.pone.0230741
The effect of competition on the control of invading plant pathogens
A - Papers appearing in refereed journals
Sharp, R.T., Van Den Bosch, F. and Shaw, M. W. 2020. The effect of competition on the control of invading plant pathogens. Journal of Applied Ecology. 57 (7), pp. 1403-1412. https://doi.org/10.1111/1365-2664.13618
Are insects declining and at what rate? An analysis of standardised, systematic catches of aphid and moth abundances across Great Britain
A - Papers appearing in refereed journals
Bell, J. R., Blumgart, D. and Shortall, C. R. 2020. Are insects declining and at what rate? An analysis of standardised, systematic catches of aphid and moth abundances across Great Britain. Insect Conservation and Diversity. 13 (2), pp. 115-126. https://doi.org/10.1111/icad.12412
Population genetic structure and predominance of cyclical parthenogenesis in the bird cherry–oat aphid Rhopalosiphum padi in England
A - Papers appearing in refereed journals
Morales-Hojas, R., Gonzalez-Uriarte, A., Alvira-Iraizoz, F., Jenkins, T., Alderson, L. J., Kruger, T., Hall, M. J., Greenslade, A. F. C., Shortall, C. R. and Bell, J. R. 2020. Population genetic structure and predominance of cyclical parthenogenesis in the bird cherry–oat aphid Rhopalosiphum padi in England. Evolutionary Applications. https://doi.org/10.1111/eva.12917
What makes or breaks a campaign to stop an invading plant pathogen?
A - Papers appearing in refereed journals
Milne, A., Gottwald, T., Parnell, S. R., Alonso Chavez, V. and Vandenbosch, F. 2020. What makes or breaks a campaign to stop an invading plant pathogen? PLOS Computational Biology. 16 (2), p. e1007570. https://doi.org/10.1371/journal.pcbi.1007570
Eight Colletotrichum species, including a novel species, are associated with areca palm anthracnose in Hainan, China
A - Papers appearing in refereed journals
Cao, X., Xu, X., Che, H., West, J. S. and Luo, D. 2019. Eight Colletotrichum species, including a novel species, are associated with areca palm anthracnose in Hainan, China. Plant Disease. 104 (5), pp. 1369-1377. https://doi.org/10.1094/PDIS-10-19-2077-RE
A phylogenetically distinct lineage of Pyrenopeziza brassicae associated with chlorotic leaf spot of Brassicaceae in North America
A - Papers appearing in refereed journals
Carmody, S., King, K. M., Ocamb, C., Fraaije, B. A., West, J. S. and Du Toit, L. 2019. A phylogenetically distinct lineage of Pyrenopeziza brassicae associated with chlorotic leaf spot of Brassicaceae in North America . Plant Pathology. 69 (3), pp. 518-537. https://doi.org/10.1111/ppa.13137
Moth biomass has fluctuated over 50 years in Britain but lacks a clear trend
A - Papers appearing in refereed journals
Macgregor, C. J., Williams, J. H., Bell, J. R. and Thomas, C. D. 2019. Moth biomass has fluctuated over 50 years in Britain but lacks a clear trend. Nature Ecology & Evolution. https://doi.org/10.1038/s41559-019-1028-6
Climate-induced phenology shifts linked to range expansions in species with multiple reproductive cycles per year
A - Papers appearing in refereed journals
Macgregor, C.J, Thomas, C.D., Roy, D.B., Beaumont, M., Bell, J. R., Brereton, T., Bridle, J., Dytham, C., Fox, R., Gotthard, K., Hoffmann, A., Martin, G., Middlebrook, I., Nylin, S., Platts, P., Rasteiro, R., Saccheri, I., Villoutreix, R., Wheat, C. and Hill, J. 2019. Climate-induced phenology shifts linked to range expansions in species with multiple reproductive cycles per year. Nature Communications. 10 (4455). https://doi.org/10.1038/s41467-019-12479-w
Genetic structure at national and regional scale in a long-distance dispersing pest organism, the bird cherry–oat aphid Rhopalosiphum padi
A - Papers appearing in refereed journals
Morales-Hojas, R., Gonzalez-Uriarte, A., Alvira-Iraizoz, F., Jenkins, T., Alderson, L. J., Kruger, T., Hall, M. J., Greenslade, A. F. C., Shortall, C. R. and Bell, J. R. 2019. Genetic structure at national and regional scale in a long-distance dispersing pest organism, the bird cherry–oat aphid Rhopalosiphum padi. bioRxiv. https://doi.org/10.1101/829986
Is the Insect Apocalypse upon us? How to Find Out
A - Papers appearing in refereed journals
Montgomery, G. A., Dunn, R., Fox, R., Jongejans, E., Leather, S. R., Saunders, M. E., Shortall, C. R., Tingley, M. W. and Wagner, D. L. 2019. Is the Insect Apocalypse upon us? How to Find Out. Biological Conservation. (22 November), p. 108327. https://doi.org/10.1016/j.biocon.2019.108327
Bucking the trend: the diversity of Anthropocene ‘winners’ among British moths
A - Papers appearing in refereed journals
Boyes, D. H., Fox, R., Shortall, C. R. and Whittaker, R. J. 2019. Bucking the trend: the diversity of Anthropocene ‘winners’ among British moths . Frontiers of Biogeography. 11 (3), p. e43862. https://doi.org/10.21425/F5FBG43862
Characteristics and distribution of Colletotrichum species in coffee plantations in Hainan, China
A - Papers appearing in refereed journals
Cao, X. R., Xu, X. M., Che, H. Y., West, J. S. and Luo, D. Q. 2019. Characteristics and distribution of Colletotrichum species in coffee plantations in Hainan, China. Plant Pathology. 68 (6), pp. 1146-1156. https://doi.org/10.1111/ppa.13028
First application of loop-mediated isothermal amplification (LAMP) assays for rapid identification of mating type in the heterothallic fungus Aspergillus fumigatus
A - Papers appearing in refereed journals
King, K. M., Hawkins, N. J., Atkins, S. L., Dyer, P. S., West, J. S. and Fraaije, B. A. 2019. First application of loop-mediated isothermal amplification (LAMP) assays for rapid identification of mating type in the heterothallic fungus Aspergillus fumigatus . Mycoses. https://doi.org/10.1111/myc.12959
The Challenges Posed by Global Broadacre Crops in Delivering Smart Agri- Robotic Solutions: A Fundamental Rethink is Required
A - Papers appearing in refereed journals
Grieve, B. D., Duckett, T., Collinson, M., Boyd, L., West, J. S., Yin, H., Arvin, F. and Pearson, S. 2019. The Challenges Posed by Global Broadacre Crops in Delivering Smart Agri- Robotic Solutions: A Fundamental Rethink is Required. Global Food Security. 23, pp. 116-124. https://doi.org/10.1016/j.gfs.2019.04.011
Ecological traits predict population changes in moths
A - Papers appearing in refereed journals
Coulthard, E., Norrey, J., Shortall, C. R. and Harris, W. E. 2019. Ecological traits predict population changes in moths. Biological Conservation. 233, pp. 213-219. https://doi.org/10.1016/j.biocon.2019.02.023
Trends and indicators for quantifying moth abundance and occupancy in Scotland
A - Papers appearing in refereed journals
Dennis, E. B., Brereton, T. M., Morgan, B. J. T., Fox, R., Shortall, C. R., Prescott, T. and Foster, S. 2019. Trends and indicators for quantifying moth abundance and occupancy in Scotland. Journal of Insect Conservation. https://doi.org/10.1007/s10841-019-00135-z
Spatial and habitat variation in aphid, butterfly, moth and bird phenologies over the last half century
A - Papers appearing in refereed journals
Bell, J. R., Botham, M. S., Henrys, P. A., Leech, D. I., Pearce-Higgins, J. W., Shortall, C. R., Brereton, T. M., Pickup, J. and Thackeray, S. J. 2019. Spatial and habitat variation in aphid, butterfly, moth and bird phenologies over the last half century. Global Change Biology. 25 (6), pp. 1982-1994. https://doi.org/10.1111/gcb.14592
A loop-mediated isothermal amplification (LAMP) assay for rapid and specific detection of airborne inoculum of Uromyces betae (sugar beet rust)
A - Papers appearing in refereed journals
Kaczmarek, A. M., King, K. M., West, J. S., Stevens, M., Sparkes, D. and Dickinson, M. 2019. A loop-mediated isothermal amplification (LAMP) assay for rapid and specific detection of airborne inoculum of Uromyces betae (sugar beet rust). Plant Disease. 103 (3), pp. 417-421. https://doi.org/10.1094/PDIS-02-18-0337-RE
Long‐term shifts in the seasonal abundance of adult Culicoides biting midges and their impact on potential arbovirus outbreaks
A - Papers appearing in refereed journals
Sanders, C., Shortall, C. R., England, M., Harrington, R., Purse, B., Burgin, L., Carpenter, S. and Gubbins, S. 2019. Long‐term shifts in the seasonal abundance of adult Culicoides biting midges and their impact on potential arbovirus outbreaks. Journal of Applied Ecology. 56 (7), pp. 1649-1660. https://doi.org/10.1111/1365-2664.13415
Insect population trends and the IUCN Red List process
A - Papers appearing in refereed journals
Fox, R., Harrower, C.A., Bell, J. R., Shortall, C. R., Middlebrook, I. and Wilson, R.J. 2018. Insect population trends and the IUCN Red List process. Journal of Insect Conservation. pp. 1-10. https://doi.org/10.1007/s10841-018-0117-1
Stress and sexual reproduction affect the dynamics of the wheat pathogen effector AvrStb6 and strobilurin resistance
A - Papers appearing in refereed journals
Kema, G. H. J., Mirzadi Gohari, A., Aouini, L., Gibriel, H. A. Y., Ware, S. B., Van Den Bosch, F., Manning-Smith, R., Alonso Chavez, V., Helps, J., Ben M’Barek, S., Mehrabi, R., Diaz-Trujillo, C., Zamani, E., Schouten, H. J., Van Der Lee, T. A. J., Waalwijk, C., de Waard, M. A., de Wit, P. J. G. M., Verstappen, E. C. P., Thomma, B. P. H. J., Meijer, H. J. G. and Seidl, M.l F. 2018. Stress and sexual reproduction affect the dynamics of the wheat pathogen effector AvrStb6 and strobilurin resistance. Nature Genetics. 50 (3), pp. 375-380. https://doi.org/10.1038/s41588-018-0052-9
Rothamsted Long-term experiments : guide to the classical and other long-term experiments, datasets and sample archive
E - Books edited/written by staff member, alone/with others
Macdonald, A. J., Poulton, P. R., Clark, I. M., Scott, T., Glendining, M. J., Perryman, S. A. M., Storkey, J., Bell, J. R., Shield, I. F., Mcmillan, V. E. and Hawkins, J. M. B. Macdonald, A. J. (ed.) 2018. Rothamsted Long-term experiments : guide to the classical and other long-term experiments, datasets and sample archive. Rothamsted Research, Harpenden.
Loop-mediated isothermal amplification (LAMP) assays for rapid detection of Pyrenopeziza brassicae (light leaf spot of brassicas)
A - Papers appearing in refereed journals
King, K. M., Krivova, V., Canning, G. G. M., Hawkins, N. J., Kaczmarek, A. M., Perryman, S. A. M., Dyer, P. S., Fraaije, B. A. and West, J. S. 2018. Loop-mediated isothermal amplification (LAMP) assays for rapid detection of Pyrenopeziza brassicae (light leaf spot of brassicas). Plant Pathology. 67 (1), pp. 167-174. https://doi.org/10.1111/ppa.12717
Characterization of an antimicrobial and phytotoxic ribonuclease secreted by the fungal wheat pathogen Zymoseptoria tritici
A - Papers appearing in refereed journals
Kettles, G. J., Bayon, C., Sparks, C. A., Canning, G., Kanyuka, K. and Rudd, J. J. 2018. Characterization of an antimicrobial and phytotoxic ribonuclease secreted by the fungal wheat pathogen Zymoseptoria tritici. New Phytologist. 217 (1), pp. 320-331. https://doi.org/10.1111/nph.14786
Detecting Wheat Powdery Mildew and Predicting Grain Yield Using Unmanned Aerial Photography
A - Papers appearing in refereed journals
Liu, W., Cao, X., Fan, J, Wang, Z., Yan, Z., Luo, Y., West, J. S., Xu, X. and Zhou, Y. 2018. Detecting Wheat Powdery Mildew and Predicting Grain Yield Using Unmanned Aerial Photography. Plant Disease. 102, pp. 1981-1988. https://doi.org/10.1094/PDIS-12-17-1893-RE
Forecasting sclerotinia infection in UK oilseed rape
C1 - Edited contributions to conferences/learned societies
Young, C., Canning, G. and West, J. S. 2018. Forecasting sclerotinia infection in UK oilseed rape. IOBC.
Variability in commercial demand for tree saplings affects the probability of introducing exotic forest diseases
A - Papers appearing in refereed journals
Alonso Chavez, V., Gilligan, C. A. and Van Den Bosch, F. 2018. Variability in commercial demand for tree saplings affects the probability of introducing exotic forest diseases. Journal of Applied Ecology. 56 (1), pp. 80-89. https://doi.org/10.1111/1365-2664.13242
Climate Change And Insect Pests: Monitoring And Surveillance Of The Migratory Phase For Smart Crop Protection
A - Papers appearing in refereed journals
Bell, J. R. 2018. Climate Change And Insect Pests: Monitoring And Surveillance Of The Migratory Phase For Smart Crop Protection. Phytoma. 300 (June), pp. 84-86.
Arable Crop Disease Alert System - AHDB Project Report 594
D1 - Technical reports: non-confidential
West, J. S., Canning, G., King, K. M., Fraaije, B. A. and Wili, S. 2018. Arable Crop Disease Alert System - AHDB Project Report 594. Stoneleigh Home Grown Cereals Authority (HGCA).
Exploring the resilience of wheat crops grown in short rotations through minimising the build-up of an important soil-borne fungal pathogen
A - Papers appearing in refereed journals
Mcmillan, V. E., Canning, G., Moughan, J., White, R. P., Gutteridge, R. J. and Hammond-Kosack, K. E. 2018. Exploring the resilience of wheat crops grown in short rotations through minimising the build-up of an important soil-borne fungal pathogen. Scientific Reports. 8 (9550), pp. 1-13. https://doi.org/10.1038/s41598-018-25511-8
Three Colletotrichum Species, Including a New Species, are Associated to Leaf Anthracnose of Rubber Tree in Hainan, China
A - Papers appearing in refereed journals
Cao, X., Xu, X., Che, H., West, J. S. and Luo, D. 2018. Three Colletotrichum Species, Including a New Species, are Associated to Leaf Anthracnose of Rubber Tree in Hainan, China. Plant Disease. 103 (1), pp. 117-124. https://doi.org/10.1094/PDIS-02-18-0374-RE
Dynamic selection of environmental variables to improve the prediction of aphid phenology: A machine learning approach
A - Papers appearing in refereed journals
Holloway, P., Kudenko, D. and Bell, J. R. 2018. Dynamic selection of environmental variables to improve the prediction of aphid phenology: A machine learning approach. Ecological Indicators. 88 (May), pp. 512-521. https://doi.org/10.1016/j.ecolind.2017.10.032
The genome of the biting midge Culicoides sonorensis and gene expression analyses of vector competence for Bluetongue virus
A - Papers appearing in refereed journals
Morales-Hojas, R., Hinsley, M., Armean, I .M., Silk, R., Harrup, L. E., Gonzalez-Uriarte, A., Veronesi, E., Campbell, L., Nayduch, D., Saski, C., Tabachnick, W. J., Kersey, P., Carpenter, S. and Fife, M. 2018. The genome of the biting midge Culicoides sonorensis and gene expression analyses of vector competence for Bluetongue virus. BMC Genomics. 19, p. 624. https://doi.org/10.1101/249482
The origins of global invasions of the German wasp (Vespula germanica) and its infection with four honey bee viruses
A - Papers appearing in refereed journals
Brenton-Rule, E., Doblemann, J., Baty, J. W., Brown, R., Dvorak, L., Grangier, J., Massiochi, M., McGrannachan, C., Shortall, C. R., Schmack, J., Van Zyl, C., Veldtman, R. and Lester, P. J. 2018. The origins of global invasions of the German wasp (Vespula germanica) and its infection with four honey bee viruses. Biological Invasions. 20 (12), p. 3445–3460. https://doi.org/10.1007/s10530-018-1786-0
Input data needed for a risk model for the entry, establishment and spread of a pathogen (Phomopsis vaccinii) of blueberries and cranberries in the EU
A - Papers appearing in refereed journals
Van Bruggen, A. H. C., West, J. S., Van der Werf, W., Potting, R. P. J., Gardi, C., Koufakis, I., Zelenev, V. V., Narouei-Khandan, H., Schilder, A. and Harmon, P. 2018. Input data needed for a risk model for the entry, establishment and spread of a pathogen (Phomopsis vaccinii) of blueberries and cranberries in the EU. Annals of Applied Biology - AAB. 172 (2), pp. 126-147. https://doi.org/10.1111/aab.12414
UK Environmental Change Network (ECN) spittle bug data: 1993-2015
N - Datasets
Rennie, S., Adamson, J., Anderson, R., Andrews, C., Bater, J., Bayfield, N., Beaton, K., Beaumont, D. A., Benham, S., Bowmaker, V., Britt, C., Brooker, R., Brooks, D. R., Brunt, J., Common, G., Cooper, R., Corbett, S., Critchley, N., Dennis, P., Dick, J., Dodd, B., Dodd, N., Donovan, N., Easter, J., Flexen, M., Gardiner, A., Hamilton, D., Hargreaves, P., Howe, M., Kahl, J., Lane, M., Langan, S., Lloyd, D., McElarney, Y., McKenna, C., McMillan, S., Milne, F., Milne, L., Morecroft, M., Murphy, M., Nelson, A., Nicholson, H., Pallett, D., Parry, D., Pearce, I., Pozsgai, G., Rose, R., Schafer, S., Scott, T., Sherrin, L., Shortall, C. R., Smith, P., Smith, R. I., Tait, R., Taylor, C., Taylor, M., Thurlow, M., Tilbury, C., Turner, A., Tyson, K., Watson, H., Whittaker, M. and Wood, C. 2018. UK Environmental Change Network (ECN) spittle bug data: 1993-2015 . NERC Environmental Information Data Centre. https://doi.org/10.5285/aff433be-0869-4393-b765-9e6faad2a12b
Inoculum potential of Sclerotinia sclerotiorum sclerotia depends on isolate and host plant
A - Papers appearing in refereed journals
Taylor, A., Coventry, E., Handy, C., West, J. S., Young, C. S. and Clarkson, J. P. 2018. Inoculum potential of Sclerotinia sclerotiorum sclerotia depends on isolate and host plant. Plant Pathology. 67 (6), pp. 1286-1295. https://doi.org/10.1111/ppa.12843