PS: Crop Productivity and Quality

TitlePS: Crop Productivity and Quality
TypeResearch cluster

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Effects of selenium on plant metabolism and implications for crops and consumers

B - Book chapters etc edited externally
Schiavon, M., Lima, L. W., Jiang, Y. and Hawkesford, M. J. 2017. Effects of selenium on plant metabolism and implications for crops and consumers. in: Pilon-Smits, E. A. H., Winkel, L. H. E. and Lin, Z-Q. (ed.) Selenium in plants (Chapter 15) Springer International Publishing AG.

Development of wheat with low-viscosity grain extracts using novel alleles of IRX9 orthologue TaGT43_2

C1 - Edited contributions to conferences/learned societies
Pellny, T. K., Patil, A., Freeman, J., Lovegrove, A., Plummer, A., Hess, L., Shewry, P. R., Phillips, A., Berry, S. and Mitchell, R. 2017. Development of wheat with low-viscosity grain extracts using novel alleles of IRX9 orthologue TaGT43_2. Quality & Nutrition at MonoGram 2017, 4-6 April 2017, University of Bristol, Bristol p8 Oral Presentation. Bristol, University of Bristol. pp. 8

The Gsp-1 genes encode the wheat arabinogalactan peptide

C2 - Non-edited contributions to conferences
Wilkinson, M. D., Tosi, P., Lovegrove, A., Corol, D. I., Ward, J. L., Palmer, R., Powers, S., Passmore, D., Webster, G., Marcus, S. E., Knox, J. P. and Shewry, P. R. 2017. The Gsp-1 genes encode the wheat arabinogalactan peptide. Quality and Nutrition at MonoGram 2017, 4-6 April 2017, University of Bristol, Bristol , UK (oral presentation). pp. p10

The relationships between genotype, yield and temperature on protein distribution on the wheat endosperm

C2 - Non-edited contributions to conferences
Savill, G. P. 2017. The relationships between genotype, yield and temperature on protein distribution on the wheat endosperm. Plant nutrition, growth and environment interactions III International Conferernce, Vienna, Austria, 20-21 February, 2017. VISCEA, Vienna Internatinal Science Conferences and Events Association. pp. 36

Use of a modified CRISPR/Cas9 construct to simultaneously mutagenize multiple genes in hexaploid wheat

C1 - Edited contributions to conferences/learned societies
Winfield, M., Allen, S., Cartlidge, L., Sparks, C. A., Jones, H., Huttly, A. K., Martignago, D., Hawkesford, M. J. and Edwards, K. 2017. Use of a modified CRISPR/Cas9 construct to simultaneously mutagenize multiple genes in hexaploid wheat. MonoGram 2017, 4-6 April, University of Bristol. Bristol, University of Bristol.

Feruloylation and structure of arabinoxylan in wheat endosperm cell walls from RNAi lines with suppression of genes responsible for backbone synthesis and decoration

A - Papers appearing in refereed journals
Freeman, J., Ward, J. L., Kosik, O., Lovegrove, A., Wilkinson, M. D., Shewry, P. R. and Mitchell, R. A. C. 2017. Feruloylation and structure of arabinoxylan in wheat endosperm cell walls from RNAi lines with suppression of genes responsible for backbone synthesis and decoration. Plant Biotechnology Journal. 15 (11), pp. 1429-1438. https://doi.org/10.1111/pbi.12727

The Gsp-1 genes encode the wheat arabinogalactan peptide

A - Papers appearing in refereed journals
Wilkinson, M. D., Tosi, P., Lovegrove, A., Corol, D. I., Ward, J. L., Palmer, R., Powers, S. J., Passmore, D., Webster, G., Marcus, S. E., Knox, J. P. and Shewry, P. R. 2017. The Gsp-1 genes encode the wheat arabinogalactan peptide. Journal of Cereal Science. 74 (March), pp. 155-164. https://doi.org/10.1016/j.jcs.2017.02.006

Genetic variation in traits for nitrogen use efficiency in wheat

A - Papers appearing in refereed journals
Hawkesford, M. J. 2017. Genetic variation in traits for nitrogen use efficiency in wheat. Journal of Experimental Botany. 68 (10), pp. 2627-2632. https://doi.org/10.1093/jxb/erx079

Automated method to determine two critical growth stages of wheat: heading and flowering

A - Papers appearing in refereed journals
Sadeghi-Tehran, P., Sabermanesh, K., Virlet, N. and Hawkesford, M. J. 2017. Automated method to determine two critical growth stages of wheat: heading and flowering. Frontiers in Plant Science. 8 (252). https://doi.org/10.3389/fpls.2017.00252

Temporally and genetically discrete periods of wheat sensitivity to high temperature

A - Papers appearing in refereed journals
Barber, H. M., Lukac, M., Simmonds, J., Semenov, M. A. and Gooding, M. J. 2017. Temporally and genetically discrete periods of wheat sensitivity to high temperature. Frontiers in Plant Science. 8 (51), p. 9p. https://doi.org/10.3389/fpls.2017.00051

Characterization of cereal β-glucan extracts from oat and barley and quantification of proteinaceous matter

A - Papers appearing in refereed journals
Zielke, C., Kosik, O., Ainalem, M. L., Lovegrove, A., Stradner, A. and Nilsson, L. 2017. Characterization of cereal β-glucan extracts from oat and barley and quantification of proteinaceous matter. PLOS ONE. 12 (2), p. e0172034. https://doi.org/10.1371/journal.pone.0172034

Nutrient use efficiency in wheat and prospects for improvement

C2 - Non-edited contributions to conferences
Hawkesford, M. J. 2017. Nutrient use efficiency in wheat and prospects for improvement. Plant nutrition, growth and environment interactions III International conference, Vienna, Austria, 20-21 February, 2017.

Plant phenotyping: increasing throughput and precision at multiple scales - Foreword

A - Papers appearing in refereed journals
Hawkesford, M. J. and Lorence, A. 2017. Plant phenotyping: increasing throughput and precision at multiple scales - Foreword. Functional Plant Biology. 44 (1), pp. V-VII. https://doi.org/10.1071/FPv44n1_FO

Methods to estimate changes in soil water for phenotyping root activity in the field

A - Papers appearing in refereed journals
Whalley, W. R., Binley, A., Watts, C. W., Shanahan, P., Dodd, I. C., Ober, E. S., Ashton, R. W., Webster, C. P., White, R. P. and Hawkesford, M. J. 2017. Methods to estimate changes in soil water for phenotyping root activity in the field. Plant and Soil. 415 (1-2), pp. 407-422. https://doi.org/10.1007/s11104-016-3161-1

Changes in the arabinoxylan fraction of wheat grain during alcohol production

A - Papers appearing in refereed journals
Kosik, O., Powers, S. J., Chatzifragkou, A., Prabhakumari, P. C., Charalampopoulos, D., Hess, L., Brosnan, J., Shewry, P. R. and Lovegrove, A. 2017. Changes in the arabinoxylan fraction of wheat grain during alcohol production. Food Chemistry. 221 (15 April), pp. 1754-1762. https://doi.org/10.1016/j.foodchem.2016.10.109

Designing future barley ideotypes using a crop model ensemble

A - Papers appearing in refereed journals
Tao, F. L., Rotter, R. P., Palosuo, T., Diaz-Ambrona, C. G. H., Minguez, M. I., Semenov, M. A., Kersebaum, K. C., Nendel, C., Cammarano, D., Hoffmann, H., Ewert, F., Dambreville, A., Martre, P., Rodriguez, L., Ruiz-Ramos, M., Gaiser, T., Hohn, J. G., Salo, T., Ferrise, R., Bindi, M. and Schulman, A. H. 2017. Designing future barley ideotypes using a crop model ensemble. European Journal of Agronomy. 82, pp. 144-162. https://doi.org/10.1016/j.eja.2016.10.012

Comprehensive proteomic profiling of wheat gluten using a combination of data-independent and data-dependent acquisition

A - Papers appearing in refereed journals
Bromilow, S. N. L., Gethings, L. A., Langridge, J. I., Shewry, P. R., Buckley, M., Bromley, M. J. and Mills, E. N. C. 2017. Comprehensive proteomic profiling of wheat gluten using a combination of data-independent and data-dependent acquisition. Frontiers in Plant Science. 7 (Article 2020), p. 13p. https://doi.org/10.3389/fpls.2016.02020

Chloride and sulfate salinity differently affect biomass, mineral nutrient composition and expression of sulfate transport and assimilation genes in Brassica rapa

A - Papers appearing in refereed journals
Reich, M., Aghajanzadeh, T. A., Helm, J., Parmar, S., Hawkesford, M. J. and De Kok, L. J. 2017. Chloride and sulfate salinity differently affect biomass, mineral nutrient composition and expression of sulfate transport and assimilation genes in Brassica rapa. Plant and Soil. 411 (1), pp. 319-332. https://doi.org/10.1007/s11104-016-3026-7

Role of polysaccharides in food, digestion, and health

A - Papers appearing in refereed journals
Lovegrove, A., Edwards, C. H., De Noni, I., Patel, H., El, S. N., Grassby, T., Zielke, C., Ulmius, M., Nilsson, L., Butterworth, P. J., Ellis, P. R. and Shewry, P. R. 2017. Role of polysaccharides in food, digestion, and health. Critical Reviews In Food Science And Nutrition. 57 (2), pp. 237-253. https://doi.org/10.1080/10408398.2014.939263

System analysis of metabolism and the transcriptome in Arabidopsis thaliana roots reveals differential co-regulation upon iron, sulfur and potassium deficiency

A - Papers appearing in refereed journals
Forieri, I., Sticht, C., Reichelt, M., Gretz, N., Hawkesford, M. J., Malagoli, M., Wirtz, M. and Hell, R. 2017. System analysis of metabolism and the transcriptome in Arabidopsis thaliana roots reveals differential co-regulation upon iron, sulfur and potassium deficiency. Plant, Cell and Environment. 40 (1), pp. 95-107. https://doi.org/10.1111/pce.12842

Preface to the second edition

B - Book chapters etc edited externally
Shewry, P. R. and Ulrich, S. 2017. Preface to the second edition. in: Shewry, P. R. and Ullrich, S. E. (ed.) Barley: chemistry and technology, 2nd ed American Association of Cereal Chemists (AACC), St Paul, MN. pp. v

A conserved fungal glycosyltransferase facilitates pathogenesis of plants by enabling hyphal growth on solid surfaces

A - Papers appearing in refereed journals
King, R., Urban, M., Lauder, R. P., Hawkins, N. J., Evans, M., Plummer, A., Halsey, K., Lovegrove, A., Hammond-Kosack, K. E. and Rudd, J. J. 2017. A conserved fungal glycosyltransferase facilitates pathogenesis of plants by enabling hyphal growth on solid surfaces. PLOS Pathogens. 13 (10), p. e1006672. https://doi.org/10.1371/journal.ppat.1006672

Climate Change and Future Pollen Allergy in Europe

A - Papers appearing in refereed journals
Lake, I. R, Jones, N. R., Agnew, M., Goodess, C. M., Giorgi, F., Hamaoui-Laguel, L., Semenov, M. A., Solmon, F., Storkey, J., Vautard, R. and Epstein, M. M. 2017. Climate Change and Future Pollen Allergy in Europe. Environmental Health Perspectives. 125, pp. 385-391. https://doi.org/10.1289/ehp173

The role of ZIP transporters and group F bZIP transcription factors in the Zn-deficiency response of wheat (Triticum aestivum).

A - Papers appearing in refereed journals
Evens, N. P., Buchner, P. H., Williams, L. E. and Hawkesford, M. J. 2017. The role of ZIP transporters and group F bZIP transcription factors in the Zn-deficiency response of wheat (Triticum aestivum). The Plant Journal. 92 (2), pp. 291-304. https://doi.org/10.1111/tpj.13655

Development and characterization of wheat lines with increased levels of arabinoxylan

A - Papers appearing in refereed journals
Tremmel-Bede, K., Lang, L., Torok, K., Tomoskozi, S, Vida, G, Shewry, P. R., Bedo, Z. and Rakszegi, M. 2017. Development and characterization of wheat lines with increased levels of arabinoxylan. Euphytica. 213, p. 291. https://doi.org/10.1007/s10681-017-2066-2

Physical robustness of canopy temperature models for crop heat stress simulation across environments and production conditions

A - Papers appearing in refereed journals
Webber, H., White, J. W., Kimball, B. A., Ewert, F., Asseng, S., Rezaei, E. E., Pinter, P. J., Hatfield, J., Reynolds, M. P., Ababaei, B., Bindi, M, Doltra, J., Ferrise, R., Kage, Henning, Kassie, B.T., Kersebaum, K.-C., Luig, A., Olesen, J. E., Semenov, M. A., Stratonovitch, P., Ratjen, A. M., LaMorte, R. L., Leavitt, S. W., Hunsaker, D. J., Wall, G. W. and Martre, P. 2017. Physical robustness of canopy temperature models for crop heat stress simulation across environments and production conditions. Field Crops Research. 216, pp. 75-88. https://doi.org/10.1016/j.fcr.2017.11.005

How does inter-annual variability of attainable yield affect the magnitude of yield gaps for wheat and maize? An analysis at ten sites

A - Papers appearing in refereed journals
Hoffmann, M. P., Haakana, M., Asseng, S., Hohn, J. G., Palosuo, T., Ruiz-Ramos, M., Fronzek, S., Ewert, F., Gaiser, T., Kassie, B. T., Paff, K., Razaei, E. E., Rodriguez, A., Semenov, M. A., Srivastava, A. K., Stratonovitch, P., Tao, F., Chen, Y. and Rotter, R. P. 2017. How does inter-annual variability of attainable yield affect the magnitude of yield gaps for wheat and maize? An analysis at ten sites. Agricultural Systems. 159, pp. 199-208. https://doi.org/10.1016/j.agsy.2017.03.012

Enhanced Plant Rooting and Crop System Management for Improved N Use Efficiency

B - Book chapters etc edited externally
Rosolem, C. A., Ritz, K., Cantarella, H., Hawkesford, M. J., Whalley, W. R. and Mooney, S. J. 2017. Enhanced Plant Rooting and Crop System Management for Improved N Use Efficiency. in: Sparks, D. L. (ed.) Advances in Agronomy Vol.146 Academic Press Inc Elsevier Science.

Characterization of the wheat leaf metabolome during grain filling and under varied N-supply

A - Papers appearing in refereed journals
Heyneke, E., Watanabe, M., Erban, A, Duan, G, Buchner, P. H., Walther, D., Kopka, J, Hawkesford, M. J. and Hoefgen, R. 2017. Characterization of the wheat leaf metabolome during grain filling and under varied N-supply. Frontiers in Plant Science. 8 (2048), pp. 1-18. https://doi.org/10.3389/fpls.2017.02048

Multi-feature machine learning model for automatic segmentation of green fractional vegetation cover for high-throughput field phenotyping

A - Papers appearing in refereed journals
Sadeghi-Tehran, P., Virlet, N., Sabermanesh, K. and Hawkesford, M. J. 2017. Multi-feature machine learning model for automatic segmentation of green fractional vegetation cover for high-throughput field phenotyping. Plant Methods. 13 (103), pp. 1-16. https://doi.org/10.1186/s13007-017-0253-8

Improving the uptake and assimilation of nitrogen in wheat plants

B - Book chapters etc edited externally
Le Gouis, J. and Hawkesford, M. J. 2016. Improving the uptake and assimilation of nitrogen in wheat plants. in: Langridge, P. (ed.) Achieving sustainable cultivation of wheat. Volume 1: Breeding, quality traits, pests and diseases. Burleigh Dodds.

Similar estimates of temperature impacts on global wheat yield by three independent methods

A - Papers appearing in refereed journals
Liu, B., Asseng, S., Müller, C., Ewert, F., Elliott, J., Lobell, D. B., Martre, P., Ruane, A. C., Wallach, D., Jones, J. W., Rosenzweig, C., Aggarwal, P. K., Alderman, P. D., Anothai, J., Basso, B., Biernath, C., Cammarano, D., Challinor, A. J., Deryng, D., De Sanctis, G., Doltra, J., Fereres, E., Folberth, C., Garcia-Vila, M., Gayler, S., Hoogenboom, G., Hunt, L. A., Izaurralde, R. C., Jabloun, M., Jones, C. D., Kersebaum, K. C., Kimball, B. A., Koehler, A. K., Kumar, S. N., Nendel, C., O'Leary, G. J., Olesen, J. E., Ottman, M. J., Palosuo, T., Prasad, P. V. V., Priesack, E., Pugh, T. A. M., Reynolds, M., Rezaei, E. E., Rötter, R. P., Schmid, E., Semenov, M. A., Shcherbak, I., Stehfest, E., Stöckle, C. O., Stratonovitch, P., Streck, T., Supit, I., Tao, F., Thorburn, P., Waha, K., Wall, G. W., Wang, E., White, J. W., Wolf, J., Zhao, Z. and Zhu, Y. 2016. Similar estimates of temperature impacts on global wheat yield by three independent methods. Nature Climate Change. 6 (12), pp. 1130-1138. https://doi.org/10.1038/nclimate3115

Uncertainty of wheat water use: Simulated patterns and sensitivity to temperature and CO2

A - Papers appearing in refereed journals
Cammarano, D., Rötter, R. P., Asseng, S., Ewert, F., Wallach, D., Martre, P., Hatfield, J. L., Jones, J. W., Rosenzweig, C., Ruane, A. C., Boote, K. J., Thorburn, P. J., Kersebaum, K. C., Aggarwal, P. K., Angulo, C., Basso, B., Bertuzzi, P., Biernath, C., Brisson, N., Challinor, A. J., Doltra, J., Gayler, S., Goldberg, R., Heng, L., Hooker, J., Hunt, L. A., Ingwersen, J., Izaurralde, R. C., Müller, C., Kumar, S. N., Nendel, C., O'Leary, G. J., Olesen, J. E., Osborne, T. M., Palosuo, T., Priesack, E., Ripoche, D., Semenov, M. A., Shcherbak, I., Steduto, P., Stöckle, C. O., Stratonovitch, P., Streck, T., Supit, I., Tao, F., Travasso, M., Waha, K., White, J. W. and Wolf, J. 2016. Uncertainty of wheat water use: Simulated patterns and sensitivity to temperature and CO2. Field Crops Research. 198, pp. 80-92. https://doi.org/10.1016/j.fcr.2016.08.015

Characterising Unintended Effects of Genetic Modification on Expression of Gluten Proteins Involved in IgE-Mediated Allergies and Coeliac Disease Using Proteomics

C1 - Edited contributions to conferences/learned societies
Bromilow, S. N. L., Gethings, L., Shewry, P. R., Bromley, M., Buckley, M. and Mills, E. N. C. 2016. Characterising Unintended Effects of Genetic Modification on Expression of Gluten Proteins Involved in IgE-Mediated Allergies and Coeliac Disease Using Proteomics. Programs and Abstracts of Papers to be Presented During Scientific Sessions: 2016 AAAAI Annual Meeting . Elsevier. https://doi.org/10.1016/j.jaci.2015.12.1005

Climate forcing of an emerging pathogenic fungus across a montane multi-host community

A - Papers appearing in refereed journals
Clare, F. C., Halder, J. B., Daniel, O., Bielby, J., Semenov, M. A., Jombart, T., Loyau, A., Schmeller, D. S., Cunningham, A. A., Rowcliffe, M., Garner, T. W. J., Bosch, J. and Fisher, M. C. 2016. Climate forcing of an emerging pathogenic fungus across a montane multi-host community. Philosophical Transactions of the Royal Society B-Biological Sciences. 371 (1709). https://doi.org/10.1098/rstb.2015.0454

High throughput field phenotyping of wheat plant height and growth rate in field plot trials using UAV based remote sensing

A - Papers appearing in refereed journals
Holman, F. H., Riche, A. B., Michalski, A., Castle, M., Wooster, M. J. and Hawkesford, M. J. 2016. High throughput field phenotyping of wheat plant height and growth rate in field plot trials using UAV based remote sensing. Remote Sensing. 8 (12), p. 1031. https://doi.org/10.3390/rs8121031

Foreword: Biotechnology of major cereals

B - Book chapters etc edited externally
Shewry, P. R. 2016. Foreword: Biotechnology of major cereals. in: Jones, H. D. (ed.) Biotechnology of major cereals Wallingford, Oxon CAB International (CABI). pp. ix

Cultivation and impact of wheat

B - Book chapters etc edited externally
Shewry, P. R. 2016. Cultivation and impact of wheat. in: In Oxford research encyclopedia, environmental science Oxford University Press (OUP) Oxford.

Editorial: Journal of Cereal Science

A - Papers appearing in refereed journals
Shewry, P. R. 2016. Editorial: Journal of Cereal Science. Journal of Cereal Science. 70, pp. A1-A1. https://doi.org/10.1016/j.jcs.2016.07.012

Genome-wide analysis of autophagy-associated genes in foxtail millet (Setaria italica L.) and characterization of the function of SiATG8a in conferring tolerance to nitrogen starvation in rice

A - Papers appearing in refereed journals
Li, W. W., Chen, M., Wang, E. H., Hu, L. Q., Hawkesford, M. J., Zhong, L., Chen, Z., Xu, Z. S., Li, L. C., Zhou, Y. B., Guo, C. H. and Ma, Y. Z. 2016. Genome-wide analysis of autophagy-associated genes in foxtail millet (Setaria italica L.) and characterization of the function of SiATG8a in conferring tolerance to nitrogen starvation in rice. BMC Genomics. 17 (797), pp. 1-16. https://doi.org/10.1186/s12864-016-3113-4

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