Delivering Sustainable Wheat
Repository project
| Project dates | 01 Apr 2023 to end of 31 Mar 2028 |
|---|---|
| Researchers | |
| Principal Investigator | Kim Hammond-Kosack |
| Funder | Biotechnology and Biological Sciences Research Council |
| Department | BCP: Wheat Pathogenomics |
| Research fish code | BB/X0113/1 |
| BB/X011003/1 | |
| Grant ID | BB/X0113/1 |
| BB/X011003/1 |
Outputs
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PHI-base - The multi-species Pathogen-Host Interaction Database in 2025
A - Papers appearing in refereed journals
Urban, M., Cuzick, A., Seager, J., Nonavinakere, N., Sahu, J., Sahu, P., Iyer, V. L., Khamari, L., Martinez, M. C. and Hammond-Kosack, K. E. 2024. PHI-base - The multi-species Pathogen-Host Interaction Database in 2025. Nucleic Acids Research. https://doi.org/10.1093/nar/gkae1084
An array of Zymoseptoria tritici effectors suppress plant immune responses
A - Papers appearing in refereed journals
Thynne, E., Ali, H., Seong, K., Abukhalaf, M., Guerreiro, M. A., Flores-Nunez, V. M., Hansen, R., Bergues, A., Salman, M. J., Rudd, J. J., Kanyuka, K., Tholey, A., Krasileva, K. V., Kettles, G. J. and Stukenbrock, E. H. 2024. An array of Zymoseptoria tritici effectors suppress plant immune responses. Molecular Plant Pathology. 25 (10), p. e13500. https://doi.org/10.1111/mpp.13500
Improving wheat grain composition for human health by constructing a QTL atlas for essential minerals
A - Papers appearing in refereed journals
Sigalas, P., Shewry, P. R., Riche, A. B., Wingen, L., Feng, C., Siluveru, A., Chayut, N., Burridge, A., Uauy, C., Castle, M., Parmar, S., Philp, C., Steele, D., Orford, S., Leverington-Waite, M., Cheng, S., Griffiths, S. and Hawkesford, M. J. 2024. Improving wheat grain composition for human health by constructing a QTL atlas for essential minerals. Communications Biology. 7, p. 101. https://doi.org/10.1038/s42003-024-06692-7
Data from: A conserved fungal Knr4/Smi1 protein is vital for maintaining cell wall integrity and host plant pathogenesis
N - Datasets
Kroll, E., Bayon, C., Rudd, J. J., Armer, V., Magaji-Umashankar, A., Ames, R., Urban, M., Brown, N. A. and Hammond-Kosack, K. E. 2024. Data from: A conserved fungal Knr4/Smi1 protein is vital for maintaining cell wall integrity and host plant pathogenesis. Rothamsted Research. https://doi.org/10.23637/rothamsted.99163
A dataset of CMIP6-based climate scenarios for climate change impact assessment in Great Britain
A - Papers appearing in refereed journals
Semenov, M. A., Senapati, N., Coleman, K. and Collins, A. L. 2024. A dataset of CMIP6-based climate scenarios for climate change impact assessment in Great Britain. Data in Brief. 55 (4 July), p. 110709. https://doi.org/10.1016/j.dib.2024.110709
Navigating the Fusarium species complex: Host-range plasticity and genome variations
A - Papers appearing in refereed journals
Armer, V., Kroll, E., Darino, M., Smith, D., Urban, M. and Hammond-Kosack, K. E. 2024. Navigating the Fusarium species complex: Host-range plasticity and genome variations. Fungal Biology. https://doi.org/10.1016/j.funbio.2024.07.004
Harnessing landrace diversity empowers wheat breeding
A - Papers appearing in refereed journals
Cheng, S., Feng, C., Wingen, L. U., Cheng, H., Riche, A. B., Jiang, M., Leverington-Waite, M., Huang, Z., Collier, S., Orford, S., Wang, X., Awal, R., Barker, G., O’Hara, T., Lister, C., Siluveru, A., Quiroz-Chávez, J., Ramírez-González, R. H., Bryant, R., Berry, S., Bansal, U., Bariana, H. S., Bennett, M. J., Bicego, B., Bilham, L., Brown, J. K. M., Burridge, A., Burt, C., Buurman, M., Castle, M., Chartrain, L., Chen, B., Denbel, W., Elkot, A. F., Fenwick, P., Feuerhelm, D., Foulkes, J., Gaju, O., Gauley, A., Gaurav, K., Hafeez, A. N., Han, R., Horler, R., Hou, J., Iqbal, M. S., Kerton, M., Kondic-Spica, A., Kowalski, A., Lage, J., Li, X., Liu, H., Liu, S., Lovegrove, A., Ma, L., Mumford, C., Parmar, S., Philp, C., Playford, D., Przewieslik-Allen, A. M., Sarfraz, Z., Schafer, D., Shewry, P. R., Shi, Y., Slafer, G., Song, B., Song, B., Steele, D., Steuernagel, B., Tailby, P., Tyrrell, S., Waheed, A., Wamalwa, M. N., Wang, X., Wei, Y., Winfield, M., Wu, S., Wu, Y., Wulff, B. B. H., Xian, W., Xu, Y., Xu, Y., Yuan, Q., Zhang, X., Edwards, K. J., Dixon, L., Nicholson, P., Chayut, N., Hawkesford, M. J., Uauy, C., Sanders, D., Huang, S. and Griffiths, S. 2024. Harnessing landrace diversity empowers wheat breeding. Nature. https://doi.org/10.1038/s41586-024-07682-9
A fungal endophyte induces local cell wall-mediated resistance in wheat roots against take-all disease
A - Papers appearing in refereed journals
Chancellor, T., Smith, D. P., Chen, W., Clark, S. J., Venter, E., Halsey, K., Carrera, E., Mcmillan, V. E., Canning, G., Armer, V., Hammond-Kosack, K. E. and Palma-Guerrero, J. 2024. A fungal endophyte induces local cell wall-mediated resistance in wheat roots against take-all disease. Frontiers in Plant Science. 15, p. 1444271. https://doi.org/10.3389/fpls.2024.1444271
Stacked mutations in wheat homologues of rice SEMI-DWARF1 confer a novel semi-dwarf phenotype
A - Papers appearing in refereed journals
Ndreca, B., Huttly, A. K., Bibi, S., Bayon, C., Lund, G., Ham, J., Alarcon-Reverte, R., Addy, J., Tarkowská, D., Pearce, S., Hedden, P., Thomas, S. G. and Phillips, A. L. 2024. Stacked mutations in wheat homologues of rice SEMI-DWARF1 confer a novel semi-dwarf phenotype. BMC Plant Biology. 24, p. 384. https://doi.org/10.1186/s12870-024-05098-1
The pore-rhizosheath shapes maize root architecture by enhancing root distribution in macropores
A - Papers appearing in refereed journals
Liu, L., Qin, S., Whalley, W. R., Zhou, H., Ren, T. and Gao, W. 2024. The pore-rhizosheath shapes maize root architecture by enhancing root distribution in macropores. Plant, Cell and Environment. pp. 1-12. https://doi.org/10.1111/pce.14915
Effects of changes in climatic means, variability, and agro-technologies on future wheat and maize yields at 10 sites across the globe
A - Papers appearing in refereed journals
Bracho-Mujica, G., Rotter, R. P., Haakana, M., Palosuo, T., Fronzek, S., Asseng, S., Yi, C., Ewert, F., Gaiser, T., Kassie, B., Paff, K., Rezaei, E. E., Rodriguez, A., Ruiz-Ramos, M., Srivastava, A. K., Stratonovitch, P., Tao, F. and Semenov, M. A. 2024. Effects of changes in climatic means, variability, and agro-technologies on future wheat and maize yields at 10 sites across the globe. Agricultural and Forest Meteorology. 364 (March), p. 109887. https://doi.org/10.1016/j.agrformet.2024.109887
Control of meiotic crossover interference by a proteolytic chaperone network
A - Papers appearing in refereed journals
Kim, H., Kim, J., Son, N., Kuo, P., Morgan, C., Chambon, A., Byun, D., Park, J., Lee, Y., Park, Y. M., Fozard, J. A., Guerin, J., Hurel, A., Lambing, C., Howard, M., Hwang, I., Mercier, R., Grelon, M., Henderson, I. R. and Choi, K. 2024. Control of meiotic crossover interference by a proteolytic chaperone network. Nature Plants. https://doi.org/10.1038/s41477-024-01633-y
Identification and functional characterisation of a locus for target site integration in Fusarium graminearum
A - Papers appearing in refereed journals
Darino, M., Urban, M., Kaur, N., Wood, A. K. M., Smith, D., Grimwade-Mann, M., Beacham, A. and Hammond-Kosack, K. E. 2024. Identification and functional characterisation of a locus for target site integration in Fusarium graminearum. Fungal Biology and Biotechnology. 11 (2), pp. 1-21. https://doi.org/10.1186/s40694-024-00171-8
The effects of soil compaction on wheat seedling root growth are specific to soil texture and soil moisture status
A - Papers appearing in refereed journals
Yu, C., Mawodza, T., Atkinson, B. S., Atkinson, J. A., Sturrock, C. J., Whalley, W. R., Hawkesford, M. J., Cooper, H., Zhang, X., Zhou, H. and Mooney, S. J. 2024. The effects of soil compaction on wheat seedling root growth are specific to soil texture and soil moisture status. Rhizosphere. 29, p. 100838. https://doi.org/10.1016/j.rhisph.2023.100838
Sucrose homeostasis: Mechanisms and opportunity in crop yield improvement
A - Papers appearing in refereed journals
Miret-Barrio, J., Griffiths, C. A. and Paul, M. J. 2024. Sucrose homeostasis: Mechanisms and opportunity in crop yield improvement. Journal of Plant Physiology. 294, p. 154188. https://doi.org/10.1016/j.jplph.2024.154188
The Functional Diversity of the High-Affinity Nitrate Transporter Gene Family in Hexaploid Wheat: Insights from Distinct Expression Profiles
A - Papers appearing in refereed journals
Sigalas, P., Buchner, P. H., Kroeper, A., Hawkesford, M. J. and Kroper, A. 2024. The Functional Diversity of the High-Affinity Nitrate Transporter Gene Family in Hexaploid Wheat: Insights from Distinct Expression Profiles. International Journal Of Molecular Sciences. 25 (1), p. 509. https://doi.org/10.3390/ijms25010509
A new concept for modelling the moisture dependence of heterotrophic soil respiration
A - Papers appearing in refereed journals
Huang, Z., Liu, Y., Huang, P., Li, Z. and Zhang, X. 2023. A new concept for modelling the moisture dependence of heterotrophic soil respiration. Soil Biology and Biochemistry. 185, p. 109147. https://doi.org/10.1016/j.soilbio.2023.109147
Characterising the Influence of First-Year Wheat Cultivar on Pseudomonas Selection and Function in a Take-All Infected Field
A - Papers appearing in refereed journals
Zadjali, M. A., Rabiey, M., Mcmillan, V. E., Shaw, L. J., Hammond-Kosack, K. E., Malone, J. G., Mauchline, T. H. and Jackson, R. W. 2023. Characterising the Influence of First-Year Wheat Cultivar on Pseudomonas Selection and Function in a Take-All Infected Field. Crops. 3 (3), pp. 195-208. https://doi.org/10.3390/crops3030019
Climate-induced decline in the quality and quantity of European hops calls for immediate adaptation measures
A - Papers appearing in refereed journals
Mozny, M., Trnka, M., Vlach, V., Zalud, Z., Cejka, T., Hajkova, L., Potopova, V., Semenov, M. A., Semeradova, D. and Buntgen, U. 2023. Climate-induced decline in the quality and quantity of European hops calls for immediate adaptation measures. Nature Communications. 14, p. 6028. https://doi.org/10.1038/s41467-023-41474-5
High canopy photosynthesis before anthesis explains the outstanding yield performance of rice cultivars with ideal plant architecture
A - Papers appearing in refereed journals
Cheng, Y., Xiao, F., Huang, D., Yang, Y., Cheng, W., Jin, S., Li, G., Ding, Y., Paul, M. J. and Liu, Z. 2023. High canopy photosynthesis before anthesis explains the outstanding yield performance of rice cultivars with ideal plant architecture. Field Crops Research. 306, p. 109223. https://doi.org/10.1016/j.fcr.2023.109223
Modeling the spatial-spectral characteristics of plants for nutrient status identification using hyperspectral data and deep learning methods
A - Papers appearing in refereed journals
Okyere, F., Cudjoe, D., Sadeghi-Tehran, P., Virlet, N., Riche, A. B., Castle, M., Greche, L., Simms, D., Mhada, M., Mohareb, F. and Hawkesford, M. J. 2023. Modeling the spatial-spectral characteristics of plants for nutrient status identification using hyperspectral data and deep learning methods. Frontiers in Plant Science. 14, p. 1209500. https://doi.org/10.3389/fpls.2023.1209500
Increasing fibre in white flour and bread: Implications for health and processing
A - Papers appearing in refereed journals
Shewry, P. R., Joy, E., Segovia De La Revilla, L., Hansen, A., Brennan, J. and Lovegrove, A. 2023. Increasing fibre in white flour and bread: Implications for health and processing. Nutrition Bulletin. 48 (4), pp. 587-593. https://doi.org/10.1111/nbu.12648
Nitrogen fertilization produces divergent effects on canopy structure between indica and japonica rice reflected in leaf to panicle ratio based on deep learning
A - Papers appearing in refereed journals
Yang, Z., Qi, X., Dai, Y., Wang, Y., Xiao, F., Ni, J., Jin, S., Li, G., Ding, Y., Paul, M. J. and Liu, Z. 2023. Nitrogen fertilization produces divergent effects on canopy structure between indica and japonica rice reflected in leaf to panicle ratio based on deep learning. Field Crops Research. 304 (DEC), p. 109184. https://doi.org/10.1016/j.fcr.2023.109184
Soil structure has a greater effect on the rooting of wheat (Triticum aestivum L.) than nitrogen fertilisation rate or genotype
A - Papers appearing in refereed journals
Mawodza, T., Zhou, H., Atkinson, B. S., Atkinson, J. A., Sturrock, C. J., Riche, A. B., Whalley, W. R., Hawkesford, M. J., Cooper, H. and Mooney, S. J. 2023. Soil structure has a greater effect on the rooting of wheat (Triticum aestivum L.) than nitrogen fertilisation rate or genotype. Rhizosphere. 27, p. 100770. https://doi.org/10.1016/j.rhisph.2023.100770
Climate-induced severe water scarcity events as harbinger of global grain price
A - Papers appearing in refereed journals
Trnka, M., Meitner, J., Balek, J., Feng, S., Arbelaez-Gaviria, J., Fischer, M., Boere. E., Havlík, P., Kersebaum, K., Nendel, C., Ruiz-Ramos, M., Semeradova, D., Semenov, M. A., Podebradska, M., Esper, J., Buentgen, U., Brzezina, J., Zalud, Z., Katul, G. and Jorgen, O. 2023. Climate-induced severe water scarcity events as harbinger of global grain price. Research Square. https://doi.org/10.21203/rs.3.rs-3293805/v1
Genetic Approaches to Increase Arabinoxylan and β-Glucan Content in Wheat
A - Papers appearing in refereed journals
Prins, A. and Kosik, O. 2023. Genetic Approaches to Increase Arabinoxylan and β-Glucan Content in Wheat. Plants - Basel. 12 (18), p. 3216. https://doi.org/10.3390/plants12183216
A framework for community curation of interspecies interactions literature
A - Papers appearing in refereed journals
Cuzick, A., Seager, J., Wood, V., Urban, M., Rutherford, K. and Hammond-Kosack, K. E. 2023. A framework for community curation of interspecies interactions literature. eLife. 12, p. e84658. https://doi.org/10.7554/eLife.84658