A - Papers appearing in refereed journals
Urban, M., Cuzick, A., Seager, J., Nonavinakere, N., Sahu, J., Sahu, P., Iyer, V. L., Khamari, L., Martinez, M. C. and Hammond-Kosack, K. E. 2024. PHI-base - The multi-species Pathogen-Host Interaction Database in 2025. Nucleic Acids Research. 53 (D1), p. D826–D838. https://doi.org/10.1093/nar/gkae1084
Authors | Urban, M., Cuzick, A., Seager, J., Nonavinakere, N., Sahu, J., Sahu, P., Iyer, V. L., Khamari, L., Martinez, M. C. and Hammond-Kosack, K. E. |
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Abstract | The Pathogen–Host Interactions Database (PHI-base) has, since 2005, provided manually curated genes from fungal, bacterial, and protist pathogens that have been experimentally verified to have important pathogenicity, virulence, and/or effector functions during different types of interactions involving human, animal, plant, invertebrate and fungal hosts. PHI-base provides phenotypic annotation and genotypic information for both native and model host interactions, including gene alterations that do not alter the phenotype of the interaction. |
Keywords | Pathogenicity; Virulence; Effector; Infectious disease; Comparative genomics |
Year of Publication | 2024 |
Journal | Nucleic Acids Research |
Journal citation | 53 (D1), p. D826–D838 |
Digital Object Identifier (DOI) | https://doi.org/10.1093/nar/gkae1084 |
Open access | Published as ‘gold’ (paid) open access |
Funder | Biotechnology and Biological Sciences Research Council |
Wellcome Trust | |
Funder project or code | A FAIR community resource for pathogens, hosts and their interactions to enhance global food security and human health |
BB/K020102/1 | |
BB/I001077/1 | |
BB/S02011X/1 | |
Growing Health (WP1) - bio-inspired solutions for healthier agroecosystems: Understanding biointeractions | |
Delivering Sustainable Wheat | |
Delivering Sustainable Wheat (WP2): Delivering Resilience to Biotic Stress | |
Publisher's version | |
Accepted author manuscript | |
Supplemental file | |
Output status | In press |
Publication dates | |
Online | 26 Nov 2024 |
Publication process dates | |
Accepted | 23 Oct 2024 |
Publisher | Oxford University Press (OUP) |
ISSN | 0305-1048 |
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