WGIN Stakeholders' Newsletter [April 2014]

Hammond-Kosack, K. E., Hawkesford, M. J., Mcmillan, V. E., Hammond-Kosack, M., Shepherd, G., Griffiths, S. and Foulkes, J. 2014. WGIN Stakeholders' Newsletter [April 2014]. WGIN Stakeholders' Newsletter. April.

Authors	Hammond-Kosack, K. E., Hawkesford, M. J., Mcmillan, V. E., Hammond-Kosack, M., Shepherd, G., Griffiths, S. and Foulkes, J.
Year of Publication	2014
Journal	WGIN Stakeholders' Newsletter
Journal citation	April
ISSN	N/A
Web address (URL)	http://www.wgin.org.uk/stakeholders/WGIN%20Newsletters/WGIN_NL_%20April_2014.pdf
Funder	Biotechnology and Biological Sciences Research Council
Funder project or code	Wheat
	The Wheat Genetic Improvement Network (WGIN) - Improving the environmental footprint of farming through crop genetics and targeted traits analysis [2008-2013]
	[20:20 Wheat] Maximising yield potential of wheat
Open access	Published as green open access
File	WGIN_NL_ April_2014.pdf
Output status	Published
Publisher	Department for Environment, Food and Rural Affairs (DEFRA)
Copyright license	Publisher copyright

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Localisation of iron and zinc in grain of biofortified wheat

A - Papers appearing in refereed journals

Wan, Y., Stewart, T., Amrahli, M., Evans, J., Sharp, P., Govindan, V., Hawkesford, M. J. and Shewry, P. R. 2022. Localisation of iron and zinc in grain of biofortified wheat. Journal of Cereal Science. 105 (May 22), p. 103470. https://doi.org/10.1016/j.jcs.2022.103470

Ensembl Genomes 2022: an expanding genome resource for non-vertebrates

A - Papers appearing in refereed journals

Yates, A. D., Allen, J., Amode, R. M., Azov, A. G., Barba, M., Becerra, A., Bhai, J., Campbell, L. I., Carbajo Martinez, M., Chakiachvili, M, Chougule, K., Christensen, M., Contreras-Moreira, B., Cuzick, A., Fioretto, L. D. R., Davis, P., Silva, N. H. D., Diamantakis, S., Dyer, S., Elser, J., Filippi, C. V., Gall, A., Grigoriadis, D., Guijarro-Clarke, C., Gupta, P., Hammond-Kosack, K. E., Howe, K. L., Jaiswal, P., Kaikala, V., Kumar, V., Kumari, S., Langridge, N., Le, T., Luypaert, M., Maslen, G. L., Maurel, T., Moore, B., Muffato, M., Mushtaq, A., Naamati, G., Naithani, S., Olson, A., Parker, A., Paulini, M., Pedro, H., Perry, E., Preece, J., Quinton-Tulloch, M., Rodgers, F., Rosello, M., Ruffier, M., Seager, J., Sitnik, V., Szpak, M., Tate, J., Tello-Ruiz, M. K., Trevanion, S. J., Urban, M., Ware, D., Wei, S., Williams, G., Winterbottom, A., Zarowiecki, M., Finn, R. D. and Flicek, P. 2022. Ensembl Genomes 2022: an expanding genome resource for non-vertebrates. Nucleic Acids Research. 50 (D1), pp. D996-D1003. https://doi.org/10.1093/nar/gkab1007

Disruption of the Nα-Acetyltransferase NatB Causes Sensitivity to Reductive Stress in Arabidopsis thaliana.

A - Papers appearing in refereed journals

Huber, M., Armbruster, L., Etherington, R. D., De La Torre, C., Hawkesford, M. J., Sticht, C., Gibbs, D. J., Hell, R. and Wirtz, M. 2022. Disruption of the Nα-Acetyltransferase NatB Causes Sensitivity to Reductive Stress in Arabidopsis thaliana. Frontiers in Plant Science. 12, p. 799954. https://doi.org/10.3389/fpls.2021.799954

Global wheat production could benefit from closing the genetic yield gap

A - Papers appearing in refereed journals

Senapati, N., Semenov, M. A., Halford, N. G., Hawkesford, M. J., Asseng, S., Cooper, M., Ewert, F., Ittersum, M. K. V., Martre, P., Olesen, J. E., Reynolds, M., Rotter, R. P. and Webber, H. 2022. Global wheat production could benefit from closing the genetic yield gap. Nature Food. 3 (July), pp. 532-541. https://doi.org/10.1038/s43016-022-00540-9

Digital phenotyping and genotype-to-phenotype (G2P) models to predict complex traits in cereal crops

B - Book chapters etc edited externally

Virlet, N., Lyra, D. H. and Hawkesford, M. J. 2022. Digital phenotyping and genotype-to-phenotype (G2P) models to predict complex traits in cereal crops. in: Walter, A. (ed.) Advances in plant phenotyping for more sustainable crop production Burleigh Dodds.

Phylogenomic analysis of a 55.1-kb 19-gene dataset resolves a monophyletic Fusarium that includes the Fusarium solani species complex.

A - Papers appearing in refereed journals

Geiser, D. M., Al-Hatmi, A. M. S., Aoki, T., Arie, T., Balmas, V., Barnes, I., Bergstrom, G. C., Bhattacharyya, M. K., Blomquist, C. L., Bowden, R. L., Brankovics, B., Brown, D. W., Burgess, L. W., Bushley, K., Busman, M., Cano-Lira, J. F., Carrillo, J. D., Chang, H., Chen, C., Chen, W., Chilvers, M., Chulze, S., Coleman, J. J., Cuomo, C. A., De Beer, Z. W., De Hoog, G. S., Del Castillo-Munera, J., Del Ponte, E. M., Dieguez-Uribeondo, J., Di Pietro, A., Edel-Hermann, V., Elmer, W. H., Epstein, L., Eskalen, A., Esposto, M. C., Everts, K. L., Fernandez-Pavía, S. P., Ferreira-Da-Silva, G., Foroud, N. A., Fourie, G., Frandsen, R. J. N., Freeman, S., Freitag, M., Frenkel, O., Fuller, K. K., Gagkaeva, T., Gardiner, D. M., Glenn, A. E., Gold, S. E., Gordon, T. R., Gregory, N. F., Gryzenhout, M., Guarro, J., Gugino, B. K., Gutierrez, S., Hammond-Kosack, K. E., Harris, L. J., Homa, M., Hong, C., Hornok, L., Huang, J., Ilkit, M., Jacobs, A., Jacobs, K., Jiang, C., Del Mar Jimenez-Gasco, M., Kang, S., Kasson, M. T., Kazan, K., Kennell, J. C., Kim, H., Kistler, H. C., Kuldau, G. A., Kulik, T., Kurzai, O., Laraba, I., Laurence, M. H., Lee, T., Lee, Y., Lee, Y., Leslie, J. F., Liew, E. C. Y., Lofton, L. W., Logrieco, A. F., Lopez-Berges, M. S., Luque, A. G., Lysoe, E., Ma, L., Marra, R. E., Martin, F. N., May, S. R., McCormick, S. P., McGee, C., Meis, J. F., Migheli, Q., Nor, N. M. I. M., Monod, M., Moretti, A., Mostert, D., Mule, G., Munaut, F., Munkvold, G. P., Nicholson, P., Nucci, M., O’Donnell, K., Pasquali, M., Pfenning, L. H., Prigitano, A., Proctor, R. H., Ranque, S., Rehner, S. A., Rep, M., Rodriguez-Alvarado, G., Rose, L. J., Roth, M. G., Ruiz-Roldan, C., Saleh, A. A., Salleh, B., Sang, H., Scandiani, M. M., Scauflaire, J., Schmale, D. G. III., Short, D. P. G., Sisic, A., Smith, J. A., Smyth, C. W., Son, H., Spahr, E., Stajich, J. E., Steenkamp, E., Steinberg, C., Subramaniam, R., Suga, H., Summerell, B. A., Susca, A., Swett, C. L., Toomajian, C., Torres-Cruz, T. J., Tortorano, A. M., Urban, M., Vaillancourt, L. J., Vallad, G. E., Van Der Lee, T. A. J., Vanderpool, D., VanDiepeningen, A. D., Vaughan, M. M., Venter, E., Vermeulen, M., Verweij, P. E., Viljoen, A., Waalwijk, C., Wallace, E. C., Walther, G., Wang, J., Ward, T. J., Wickes, B. L., Wiederhold, N. P., Wingfield, M. J., Wood, A. K. M., Xu, J., Yang, X., Yli-Mattila, T., Yun, S., Zakaria, L., Zhang, H., Zhang, N., Zhang, S. X. and Zhang, X. 2021. Phylogenomic analysis of a 55.1-kb 19-gene dataset resolves a monophyletic Fusarium that includes the Fusarium solani species complex. Phytopathology. 111 (7), pp. 1064-1079. https://doi.org/10.1094/PHYTO-08-20-0330-LE

Plant adaptation to nutrient stress

A - Papers appearing in refereed journals

Pandey, R., Vengavasi. K. and Hawkesford, M. J. 2021. Plant adaptation to nutrient stress. Plant Physiology Reports. https://doi.org/10.1007/s40502-021-00636-7

Below-ground physiological processes enhancing phosphorus acquisition in plants

A - Papers appearing in refereed journals

Vengavesi, K., Pandey, R., Soumya, P. R., Hawkesford, M. J. and Siddique, K. H. M. 2021. Below-ground physiological processes enhancing phosphorus acquisition in plants. Plant Physiology Reports. 26, pp. 600-613. https://doi.org/10.1007/s40502-021-00627-8

PHI-base in 2022 a multi-species phenotype database for Pathogen–Host Interactions

A - Papers appearing in refereed journals

Urban, M., Cuzick, A., Seager, J., Wood, V., Rutherford, K., Venkatesh, S. Y., Sahu, J., Iyer, S. V., Khamari, L., De Silva, N., Martinez, M. C., Pedro, H., Yates, A. D. and Hammond-Kosack, K. E. 2021. PHI-base in 2022 a multi-species phenotype database for Pathogen–Host Interactions. Nucleic Acids Research. 50, pp. D837-D847. https://doi.org/10.1093/nar/gkab1037

Next Generation dsRNA-Based Insect Control: Success So Far and Challenges

A - Papers appearing in refereed journals

Nitnavare, R., Bhattacharya, J., Singh, S., Kour, A., Hawkesford, M. J. and Arora, N. 2021. Next Generation dsRNA-Based Insect Control: Success So Far and Challenges. Frontiers in Plant Science. 12 (18 October), p. 673576. https://doi.org/10.3389/fpls.2021.673576

Editorial: State-of-the-Art Technology and Applications in Crop Phenomics

A - Papers appearing in refereed journals

Yang, W., Doonan, J. H., Hawkesford, M. J., Pridmore, T. and Zhou, J. 2021. Editorial: State-of-the-Art Technology and Applications in Crop Phenomics. Frontiers in Plant Science. 12, p. 2226. https://doi.org/10.3389/fpls.2021.767324

Post-translational cleavage of HMW-GS Dy10 allele improves the cookie-making quality in common wheat (Triticum aestivum).

A - Papers appearing in refereed journals

Wang, Y., Chen, Q., Li, Y., Guo, Z., Liu, C., Wan, Y., Hawkesford, M. J., Zhu, J., Wu, W., Wei, M., Zhao, K., Jiang, Y., Zhang, Y., Xu, Q., Kong, L., Pu, Z., Deng, M., Jiang, Q., Lan, X., Wang, J., Chen, G., Ma, J., Zheng, Y., Wei, Y. and Qi, P. 2021. Post-translational cleavage of HMW-GS Dy10 allele improves the cookie-making quality in common wheat (Triticum aestivum). Molecular Breeding. 41, p. 49. https://doi.org/10.1007/s11032-021-01238-9

Wheat value chains in Malawi: trends, gaps, challenges and opportunities

A - Papers appearing in refereed journals

Guwela, V. F., Maliro, M. F. A, Joy, E. J. M., Tang, K., Bokosi, J., Hawkesford, M. J., Broadley, M. and King, J. 2021. Wheat value chains in Malawi: trends, gaps, challenges and opportunities. CABI Agriculture and Bioscience. 16 (046), pp. 1-16. https://doi.org/10.1079/PAVSNNR202116046

Identifying aphid resistance in the ancestral wheat Triticum monococcum under field conditions.

A - Papers appearing in refereed journals

Simon, A. L., Caulfield, J. C., Hammond-Kosack, K. E., Field, L. M. and Aradottir, G. I. 2021. Identifying aphid resistance in the ancestral wheat Triticum monococcum under field conditions. Scientific Reports. 11, p. 13495. https://doi.org/10.1038/s41598-021-92883-9

High molecular weight glutenin subunit (HMW-GS) 1Dx5 is concentrated in small protein bodies when overexpressed in wheat starchy endosperm

A - Papers appearing in refereed journals

Wang, Y., Shewry, P. R., Hawkesford, M. J., Qi, P. and Wan, Y. 2021. High molecular weight glutenin subunit (HMW-GS) 1Dx5 is concentrated in small protein bodies when overexpressed in wheat starchy endosperm. Journal of Cereal Science. 101 (September), p. 103291. https://doi.org/10.1016/j.jcs.2021.103291

Exploring the diversity of promoter and 5’UTR sequences in ancestral, historic and modern wheat

A - Papers appearing in refereed journals

Hammond-Kosack, M., King, R., Kanyuka, K. and Hammond-Kosack, K. E. 2021. Exploring the diversity of promoter and 5’UTR sequences in ancestral, historic and modern wheat . Plant Biotechnology Journal. https://doi.org/10.1111/pbi.13672

WAKsing plant immunity, waning diseases

A - Papers appearing in refereed journals

Stephens, C., Hammond-Kosack, K. E. and Kanyuka, K. 2021. WAKsing plant immunity, waning diseases. Journal of Experimental Botany. 73 (1), pp. 22-37. https://doi.org/10.1093/jxb/erab422

The vesicular trafficking system component MIN7 is required for minimizing Fusarium graminearum infection

A - Papers appearing in refereed journals

Wood, A. K. M., Panwar, V., Grimwade-Mann, M., Ashfield, T., Hammond-Kosack, K. E. and Kanyuka, K. 2021. The vesicular trafficking system component MIN7 is required for minimizing Fusarium graminearum infection. Journal of Experimental Botany. 72 (13), pp. 5010-5023. https://doi.org/10.1093/jxb/erab170

Determination of wheat spike and spikelet architecture and grain traits using X-ray Computed Tomography imaging

A - Papers appearing in refereed journals

Zhou, H., Riche, A. B., Hawkesford, M. J., Whalley, W. R., Atkinson, B. S., Sturrock, C. J. and Mooney, S. J. 2021. Determination of wheat spike and spikelet architecture and grain traits using X-ray Computed Tomography imaging. Plant Methods. 17 (article), p. 26. https://doi.org/10.1186/s13007-021-00726-5

The interaction between wheat roots and soil pores in structured field soil

A - Papers appearing in refereed journals

Zhou, H., Whalley, W. R., Hawkesford, M. J., Ashton, R. W., Atkinson, B., Atkinson, J. A., Sturrock, C. J., Bennett, M. J. and Mooney, S. J. 2021. The interaction between wheat roots and soil pores in structured field soil. Journal of Experimental Botany. 72 (2), pp. 747-756. https://doi.org/10.1093/jxb/eraa475

A Neural Network Method for Classification of Sunlit and Shaded Components of Wheat Canopies in the Field Using High-Resolution Hyperspectral Imagery

A - Papers appearing in refereed journals

Sadeghi-Tehran, P., Virlet, N. and Hawkesford, M. J. 2021. A Neural Network Method for Classification of Sunlit and Shaded Components of Wheat Canopies in the Field Using High-Resolution Hyperspectral Imagery. Remote Sensing. 13 (5), p. 898. https://doi.org/10.3390/rs13050898

Take-all disease: New insights into an important wheat root pathogen

A - Papers appearing in refereed journals

Palma-Guerrero, J., Chancellor, T., Spong, J., Canning, G., Hammond, J., McMillan, V. E. and Hammond-Kosack, K. E. 2021. Take-all disease: New insights into an important wheat root pathogen. Trends in Plant Science. 26 (8), pp. 836-848. https://doi.org/10.1016/j.tplants.2021.02.009

Advances in understanding of nitrogen (N) uptake by plant roots

B - Book chapters etc edited externally

Hawkesford, M. J. and Whalley, W. R. 2021. Advances in understanding of nitrogen (N) uptake by plant roots. in: Gregory, P. (ed.) Understanding and improving crop root function UK Burleigh Dodds.

High-Throughput Estimation of Crop Traits - A review of ground and aerial phenotyping platforms

A - Papers appearing in refereed journals

Jin, X., Zarco-Tejada, P. J., Schmidhalter, U., Reynolds, M. P., Hawkesford, M. J., Varshney, R. V., Yang, T., Nie, C., Li, Z., Ming, B, Xiao, Y, Xie, Y. and Li, S. 2021. High-Throughput Estimation of Crop Traits - A review of ground and aerial phenotyping platforms . IEEE Geoscience and Remote Sensing Magazine. 9 (1), pp. 200-231. https://doi.org/10.1109/MGRS.2020.2998816

Wheat amino acid transporters highly expressed in grain cells regulate amino acid accumulation in grain

A - Papers appearing in refereed journals

Wan, Y., Wang, Y., Shi, Z., Rentsch, D., Ward, J. L., Hassall, K. L., Sparks, C. A., Huttly, A. K., Buchner, P. H., Powers, S. J., Shewry, P. R. and Hawkesford, M. J. 2021. Wheat amino acid transporters highly expressed in grain cells regulate amino acid accumulation in grain. PLOS ONE. 16 (2), p. e0246763. https://doi.org/10.1371/journal.pone.0246763

Time-lapse geophysical assessment of agricultural practices on soil moisture dynamics

A - Papers appearing in refereed journals

Blanchy, G., Watts, C. W., Richards, J., Bussell, J., Huntenburg, K., Sparkes, D. L., Stalham, M., Hawkesford, M. J., Whalley, W. R. and Binley, A. 2020. Time-lapse geophysical assessment of agricultural practices on soil moisture dynamics. Vadose Zone Journal. 19 (1), p. e20080. https://doi.org/10.1002/vzj2.20080

Accounting for heterogeneity in the 𝛉–𝛔 relationship: Application to wheat phenotyping using EMI

A - Papers appearing in refereed journals

Blanchy, G., Watts, C. W., Ashton, R. W., Webster, C. P., Hawkesford, M. J., Whalley, W. R. and Binley, A. 2020. Accounting for heterogeneity in the 𝛉–𝛔 relationship: Application to wheat phenotyping using EMI. Vadose Zone Journal. 19 (1), p. e20037. https://doi.org/10.1002/vzj2.20037

Assessing the evolution of wheat grain traits during the last 166 years using archived samples

A - Papers appearing in refereed journals

Mariem, S. B., Gamez, A. L., Larraya, L., Fuertes‑Mendizabal, T., Canameras, N., Araus, J. L., McGrath, S. P., Hawkesford, M. J., Muru, C. G., Gaudeul, M., Medina, L., Paton, A., Cattivelli, L., Fangmeier, A., Bunce, J., Tausz‑Posch, S., Macdonald, A. J. and Aranjuelo, I. 2020. Assessing the evolution of wheat grain traits during the last 166 years using archived samples. Scientific Reports. 10 (Article), p. 21828. https://doi.org/10.1038/s41598-020-78504-x

Ensembl Genomes 2020-enabling non-vertebrate genomic research

A - Papers appearing in refereed journals

Cuzick, A., Howe, K. L., Contreras-Moreira, B., Silva, N. D., Maslen, G., Akanni, W., Allen, J., Alvarez-Jarreta, J., Barba, M., Bolser, D. M., Cambell, L., Carbajo, M., Chakiachvili, M., Christensen, M., Cummins, C., Cuzick, A., Davis, P., Fexova, S., Gall, A., George, N., Gil, L., Gupta, P., Hammond-Kosack, K. E., Haskell, E., Hunt, S. E., Jaiswal, P., Janacek, S. H., Kersey, P. J., Langridge, N., Maheswari, U., Maurel, T., McDowall, M. D., Moore, B., Muffato, M., Naamati, G., Naithani, S., Olson, A., Papatheodorou, I., Patricio, M., Paulini, M., Pedro, H., Perry, E., Preece, J., Rosello, M., Russell, M., Sitnik, V., Staines, D. M., Stein, J., Tello-Ruiz, M. K., Trevanion, S. J., Urban, M., Wei, S., Ware, D., Williams, G., Yates, A. D. and Flicek, P. 2020. Ensembl Genomes 2020-enabling non-vertebrate genomic research. Nucleic Acids Research. 48 (D1), pp. D689-D695. https://doi.org/10.1093/nar/gkz890

Nickel toxicity in Brassica rapa seedlings - Impact on sulfur metabolism and mineral nutrient content

A - Papers appearing in refereed journals

Prajapati, D. H., Ausma, T., De Boer, J., Hawkesford, M. J. and De Kok, L. J. 2020. Nickel toxicity in Brassica rapa seedlings - Impact on sulfur metabolism and mineral nutrient content. Journal fur Kulturpflanzen - Journal of cultivated plants. 72 (9 S), pp. 473-478. https://doi.org/10.5073/JfK.2020.09.03

Impacts of G x E x M on Nitrogen Use Efficiency in Wheat and Future Prospects

A - Papers appearing in refereed journals

Hawkesford, M. J. and Riche, A. B. 2020. Impacts of G x E x M on Nitrogen Use Efficiency in Wheat and Future Prospects. Frontiers in Plant Science. 11, p. 1157. https://doi.org/10.3389/fpls.2020.01157

Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice.

A - Papers appearing in refereed journals

Whitcomb, S. J., Rakpenthai, A., Bruckner, F., Fischer, A., Parmar, S., Erban, A., Kopka, J., Hawkesford, M. J. and Hoefgen, R. 2020. Cysteine and methionine biosynthetic enzymes have distinct effects on seed nutritional quality and on molecular phenotypes associated with accumulation of a methionine-rich seed storage protein in rice. Frontiers in Plant Science. 11, p. 118. https://doi.org/10.3389/fpls.2020.01118

Genetic variation and heritability of grain protein deviation in European wheat genotypes

A - Papers appearing in refereed journals

Mosleth, E. F., Lillehammer, M., Pellny, T. K., Wood, A., Riche, A. B., Hussain, A., Griffiths, S., Hawkesford, M. J. and Shewry, P. R. 2020. Genetic variation and heritability of grain protein deviation in European wheat genotypes. Field Crops Research. 255, p. 107896. https://doi.org/10.1016/j.fcr.2020.107896

Substantial increase in yield predicted by wheat ideotypes for Europe under future climate

A - Papers appearing in refereed journals

Senapati, N., Griffiths, S, Hawkesford, M. J., Shewry, P. R. and Semenov, M. A. 2020. Substantial increase in yield predicted by wheat ideotypes for Europe under future climate. Climate Research. 80 (3), p. 189–201. https://doi.org/10.3354/cr01602

Low protein wheat for bread making

D1 - Technical reports: non-confidential

Shewry, P. R., Wood, A. J., Hassall, K. L., Pellny, T. K., Riche, A. B., Hussain, A., Hawkesford, M. J., Griffiths, S., Penson, S., Tucker, G. and Baker, C. 2020. Low protein wheat for bread making. Agriculture and Horticulture Development Board.

Time-intensive geoelectrical monitoring under winter wheat

A - Papers appearing in refereed journals

Blanchy, G., Virlet, N., Sadeghi-Tehran, P., Watts, C. W., Hawkesford, M. J., Whalley, W. R. and Binley, A. 2020. Time-intensive geoelectrical monitoring under winter wheat . Near Surface Geophysics. https://doi.org/10.1002/nsg.12107

Functional evaluation of a homologue of plant rapid alkalinisation factor (RALF) peptides in Fusarium graminearum

A - Papers appearing in refereed journals

Machado, A., Walker, C., Lee, W., Urban, M. and Hammond-Kosack, K. E. 2020. Functional evaluation of a homologue of plant rapid alkalinisation factor (RALF) peptides in Fusarium graminearum . Fungal Biology. 124 (9), pp. 753-765. https://doi.org/10.1016/j.funbio.2020.05.001

A comparison between water uptake and root length density in winter wheat: effects of root density and rhizosphere properties

A - Papers appearing in refereed journals

Whalley, W. R., Zhang, X., Whalley, P. A., Ashton, R. W., Evans, J., Hawkesford, M. J., Griffiths, G., Huang, Z. D., Zhou, H. and Mooney, S. J. 2020. A comparison between water uptake and root length density in winter wheat: effects of root density and rhizosphere properties . Plant and Soil. 451, pp. 345-356. https://doi.org/10.1007/s11104-020-04530-3

Phylogeny and gene expression of the complete NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER FAMILY (NPF) in Triticum aestivum L.

A - Papers appearing in refereed journals

Wang, H., Wan, Y., Buchner, P. H., King, R., Ma, H. and Hawkesford, M. J. 2020. Phylogeny and gene expression of the complete NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER FAMILY (NPF) in Triticum aestivum L. Journal of Experimental Botany. 71 (15), pp. 4531-4546. https://doi.org/10.1093/jxb/eraa210

Genome Sequence of Fusarium graminearum strain CML3066 isolated from a wheat spike in Southern Brazil

A - Papers appearing in refereed journals

Wood, A. K. M., King, R., Urban, M., Nicolli, C. P., Del Ponte, E. M. and Hammond-Kosack, K. E. 2020. Genome Sequence of Fusarium graminearum strain CML3066 isolated from a wheat spike in Southern Brazil. Microbiology Resource Announcements. 9 (19), pp. e00157-20. https://doi.org/10.1128/MRA.00157-20

Proteinaceous effector discovery and characterisation in filamentous plant pathogens

A - Papers appearing in refereed journals

Kanja, C. and Hammond-Kosack, K. E. 2020. Proteinaceous effector discovery and characterisation in filamentous plant pathogens. Molecular Plant Pathology. 21 (10), pp. 1353-1376. https://doi.org/10.1111/mpp.12980

Novel sources of variation in grain Zinc (Zn) concentration in bread wheat germplasm derived from Watkins landraces

A - Papers appearing in refereed journals

Khokhar, J. S., King, J., King, I. P., Young, S. D., Foulkes, M. J., De Silva, J., Weerasinghe, M., Mossa, A., Griffiths, S., Riche, A. B., Hawkesford, M. J., Shewry, P. R. and Broadley, M. R. 2020. Novel sources of variation in grain Zinc (Zn) concentration in bread wheat germplasm derived from Watkins landraces. PLOS ONE. 15 (2), p. e0229107. https://doi.org/10.1371/journal.pone.0229107

Functional QTL mapping and genomic prediction of canopy height in wheat measured using a robotic field phenotyping platform

A - Papers appearing in refereed journals

Lyra, D. H., Virlet, N., Sadeghi-Tehran, P., Hassall, K. L., Wingen, L. U., Orford, S., Griffiths, S., Hawkesford, M. J. and Slavov, G. 2020. Functional QTL mapping and genomic prediction of canopy height in wheat measured using a robotic field phenotyping platform . Journal of Experimental Botany. p. erz545. https://doi.org/10.1093/jxb/erz545

PHI-base - the Pathogen–Host Interactions database

A - Papers appearing in refereed journals

Urban, M., Cuzick, A., Seager, J., Wood, V., Rutherford, K., De Silva, N., Venkatesh, S. Y, Martinez, M. C., Pedro, H., Yates, A. D., Hassani-Pak, K. and Hammond-Kosack, K. E. 2020. PHI-base - the Pathogen–Host Interactions database . Nucleic Acids Research. 48 (Database issue D1), pp. D613-D620. https://doi.org/10.1093/nar/gkz904

Foliar N Application at Anthesis Stimulates Gene Expression of Grain Protein Fractions and Alters Protein Body Distribution in Winter Wheat (Triticum aestivum L.)

A - Papers appearing in refereed journals

Rossmann, A., Buchner, P. H., Savill, G. P., Powers, S. J., Hawkesford, M. J. and Muhling, K. H. 2019. Foliar N Application at Anthesis Stimulates Gene Expression of Grain Protein Fractions and Alters Protein Body Distribution in Winter Wheat (Triticum aestivum L.) . Journal of Agricultural and Food Chemistry - JAFC. 67 (46), pp. 12709-12719. https://doi.org/10.1021/acs.jafc.9b04634

Molybdate toxicity in Chinese cabbage is not the direct consequence of changes in sulphur metabolism

A - Papers appearing in refereed journals

Zuidersma, E. I., Ausma, T., Stuiver, C. E. E., Prajapati, D. H., Hawkesford, M. J. and De Kok, L. J. 2019. Molybdate toxicity in Chinese cabbage is not the direct consequence of changes in sulphur metabolism. Plant Biology. https://doi.org/10.1111/plb.13065

Soil strength influences wheat root interactions with soil macropores

A - Papers appearing in refereed journals

Atkinson, J. A., Hawkesford, M. J., Whalley, W. R., Zhou, H. and Money, S. J. 2019. Soil strength influences wheat root interactions with soil macropores. Plant, Cell and Environment. pp. 1-11. https://doi.org/10.1111/pce.13659

Spatial distribution of functional components in the starchy endosperm of wheat grains

A - Papers appearing in refereed journals

Shewry, P. R., Wan, Y., Hawkesford, M. J. and Tosi, P. 2019. Spatial distribution of functional components in the starchy endosperm of wheat grains. Journal of Cereal Science. 91 (January), p. 102869. https://doi.org/10.1016/j.jcs.2019.102869

PHI-Nets: A Network Resource for Ascomycete Fungal Pathogens to Annotate and Identify Putative Virulence Interacting Proteins and siRNA Targets

A - Papers appearing in refereed journals

Janowska-Seja, E. I., Lysenko, A., Urban, M., Rawlings, C. J., Toska, S. and Hammond-Kosack, K. E. 2019. PHI-Nets: A Network Resource for Ascomycete Fungal Pathogens to Annotate and Identify Putative Virulence Interacting Proteins and siRNA Targets. Frontiers in Microbiology. 10 (2721). https://doi.org/10.3389/fmicb.2019.02721

DeepCount: In-Field Automatic Quantification of Wheat Spikes Using Simple Linear Iterative Clustering and Deep Convolutional Neural Networks

A - Papers appearing in refereed journals

Sadeghi-Tehran, P., Virlet, N., Ampe, E. M., Reyns, P. and Hawkesford, M. J. 2019. DeepCount: In-Field Automatic Quantification of Wheat Spikes Using Simple Linear Iterative Clustering and Deep Convolutional Neural Networks. Frontiers in Plant Science. 10, p. 1176. https://doi.org/10.3389/fpls.2019.01176

Gradients of Gluten Proteins and Free Amino Acids along the Longitudinal Axis of the Developing Caryopsis of Bread Wheat

A - Papers appearing in refereed journals

Shi, Z., Wang, Y., Wan, Y., Hassall, K. L., Jiang, D., Shewry, P. R. and Hawkesford, M. J. 2019. Gradients of Gluten Proteins and Free Amino Acids along the Longitudinal Axis of the Developing Caryopsis of Bread Wheat . Journal of Agricultural and Food Chemistry - JAFC. 67 (31), pp. 8706-8714. https://doi.org/10.1021/acs.jafc.9b02728

Radiometric calibration of ‘Commercial off the shelf’ cameras for UAV-based high-resolution temporal phenotyping of reflectance and NDVI

A - Papers appearing in refereed journals

Holman, F. H., Riche, A. B., Castle, M., Wooster, M. J. and Hawkesford, M. J. 2019. Radiometric calibration of ‘Commercial off the shelf’ cameras for UAV-based high-resolution temporal phenotyping of reflectance and NDVI. Remote Sensing. 11 (14), p. 1657. https://doi.org/10.3390/rs11141657

sRNA profiling combined with gene function analysis reveals a lack of evidence for cross-kingdom RNAi in the wheat – Zymoseptoria tritici pathosystem

A - Papers appearing in refereed journals

Kettles, G. J., Hofinger, B. J., Hu, P., Bayon, C., Rudd, J. J., Balmer, D., Courbot, M., Hammond-Kosack, K. E., Scalliet, G. and Kanyuka, K. 2019. sRNA profiling combined with gene function analysis reveals a lack of evidence for cross-kingdom RNAi in the wheat – Zymoseptoria tritici pathosystem. Frontiers in Plant Science. 10 (892). https://doi.org/10.3389/fpls.2019.00892

Effect of Senescence Phenotypes and Nitrate Availability on Wheat Leaf Metabolome during Grain Filling

A - Papers appearing in refereed journals

Heyneke, E., Watanabe, M., Erban, A., Duan, G., Buchner, P. H., Walther, D., Kopka, J., Hawkesford, M. J. and Hoefgen, R. 2019. Effect of Senescence Phenotypes and Nitrate Availability on Wheat Leaf Metabolome during Grain Filling . Agronomy. 9 (6), p. 305. https://doi.org/10.3390/agronomy9060305

Exploiting genetic variation in nitrogen use efficiency

A - Papers appearing in refereed journals

Hawkesford, M. J. and Griffiths, S. 2019. Exploiting genetic variation in nitrogen use efficiency. Current Opinion in Plant Biology. 49, pp. 35-42. https://doi.org/10.1016/j.pbi.2019.05.003

A breeding strategy targeting the secondary gene pool of bread wheat: introgression from a synthetic hexaploid wheat

A - Papers appearing in refereed journals

Hao, M., Zhang, L., Zhao, L., Dai, S., Li, A., Yang, W., Xie, D., Li, Q., Ning, S., Yan, Z., Wu, B., Yuan Z., Huang, L., Wang, J., Zheng, K., Chen, W., Chen, X., Chen, M., Wei, Y., Zhang, H., Kishii, M., Hawkesford, M. J., Mao, L., Zheng, Y. and Liu, D. 2019. A breeding strategy targeting the secondary gene pool of bread wheat: introgression from a synthetic hexaploid wheat. Theoretical and Applied Genetics. https://doi.org/10.1007/s00122-019-03354-9

Non-canonical fungal G-protein coupled receptors promote Fusarium head blight on wheat

A - Papers appearing in refereed journals

Dilks, T., Halsey, K., De Vos, R., Hammond-Kosack, K. E. and Brown, N. A. 2019. Non-canonical fungal G-protein coupled receptors promote Fusarium head blight on wheat. PLOS Pathogens. 15 (4), p. e1007666. https://doi.org/10.1371/journal.ppat.1007666

Foliar N application at anthesis alters grain protein composition and enhances baking quality in winter wheat only under a low N fertiliser regimen

A - Papers appearing in refereed journals

Rossmann, A., Buchner, P. H., Savill, G. P., Hawkesford, M. J., Scherf, K. A. and Muhling, K. H. 2019. Foliar N application at anthesis alters grain protein composition and enhances baking quality in winter wheat only under a low N fertiliser regimen. European Journal of Agronomy. 109, p. 125909. https://doi.org/10.1016/j.eja.2019.04.004

WGIN Stakeholders' Newsletter [April 2019]

G - Articles in popular magazines and other technical publications

Hammond-Kosack, K. E., Riche, A. B., Mcmillan, V. E., Aradottir, G. I., Hammond-Kosack, M., Lister, C. and Griffiths, S. 2019. WGIN Stakeholders' Newsletter [April 2019]. WGIN Stakeholders' Newsletter.

Multiple abiotic stress, nitrate availability and the growth of wheat

A - Papers appearing in refereed journals

Ge, Y., Hawkesford, M. J., Rosolem, C. A., Mooney, S. J., Ashton, R. W., Evans, J. and Whalley, W. R. 2019. Multiple abiotic stress, nitrate availability and the growth of wheat . Soil & Tillage Research. 191 (August), pp. 171-184. https://doi.org/10.1016/j.still.2019.04.005

Saving Plants From Disease

G - Articles in popular magazines and other technical publications

Hammond-Kosack, K. E. 2019. Saving Plants From Disease. FuturumCareers. pp. 1-6. https://doi.org/10.33424/FUTURUM12

Analysis of small RNAs in the Zymoseptoria tritici – wheat interaction

C2 - Non-edited contributions to conferences

Kettles, G. J., Hofinger, B. J., Hu, P., Bayon, C., Rudd, J. J., Balmer, D., Courbot, M., Hammond-Kosack, K. E., Scalliet, G. and Kanyuka, K. 2019. Analysis of small RNAs in the Zymoseptoria tritici – wheat interaction. 30th Fungal Genetics Conference. Pacific Grove, California, USA 12 Mar 2019

Scalable Database Indexing and Fast Image Retrieval Based on Deep Learning and Hierarchically Nested Structure Applied to Remote Sensing and Plant Biology

A - Papers appearing in refereed journals

Sadeghi-Tehran, P., Angelov, P., Virlet, N. and Hawkesford, M. J. 2019. Scalable Database Indexing and Fast Image Retrieval Based on Deep Learning and Hierarchically Nested Structure Applied to Remote Sensing and Plant Biology. Journal of Imaging. 5 (3), p. 33. https://doi.org/10.3390/jimaging5030033

The relationships between seedling root screens, root growth in the field and grain yield for wheat

A - Papers appearing in refereed journals

Bai, C., Ge, Y., Ashton, R. W., Evans, J., Milne, A. E., Hawkesford, M. J., Whalley, W. R., Parry, M. A. J., Melichar, J., Feuerhelm, D., Bansept, P. and Bartsch, M. 2019. The relationships between seedling root screens, root growth in the field and grain yield for wheat . Plant and Soil. https://doi.org/10.1007/s11104-019-04088-9

Developing new types of wheat with good processing quality at low grain protein content.

Conference paper

Pellny, T. K., Wood, A., Shi, Z., Hussain, A., Riche, A. B., Baker, C., Griffiths, S., Penson, S., Mosleth, E., Hawkesford, M. J. and Shewry, P. R. 2018. Developing new types of wheat with good processing quality at low grain protein content. 13th International Gluten Workshop. CIMMYT, Mexico 14 Mar 2018

The future of Sustainable Crop Protection Relies on increased diversity of cropping systems and landscapes

B - Book chapters etc edited externally

Storkey, J., Bruce, T., Mcmillan, V. E. and Neve, P. 2018. The future of Sustainable Crop Protection Relies on increased diversity of cropping systems and landscapes. in: Lemaire, G., Cesar de Faccio Carvlho, P., Recous, S. and Kronberg, S. (ed.) Agroecosystem Diversity :Impact on Food Security and Environmental Quality Elsevier. pp. 199-209

Abstracts of Presentations at ICPP2018: Analysis of Fusarium graminearum pangenome

C1 - Edited contributions to conferences/learned societies

Machado, A., King, R., Urban, M., Del Ponte, E. M., Tessmann, D. J., Kanyuka, K. and Hammond-Kosack, K. E. 2018. Abstracts of Presentations at ICPP2018: Analysis of Fusarium graminearum pangenome. International Congress of Plant Pathology (ICPP) 2018. Boston, USA 29 Jul 2018 American Phytopathological Society (APS). https://doi.org/10.1094/PHYTO-108-10-S1.1

Analysis of small RNA silencing in Zymoseptoria tritici – wheat interactions

A - Papers appearing in refereed journals

Kettles, G. J., Hofinger, B. J., Hu, P., Bayon, C., Rudd, J. J., Balmer, D., Courbot, M., Hammond-Kosack, K. E., Scalliet, G. and Kanyuka, K. 2018. Analysis of small RNA silencing in Zymoseptoria tritici – wheat interactions. bioRxiv. https://doi.org/10.1101/501650

Rothamsted Long-term experiments : guide to the classical and other long-term experiments, datasets and sample archive

E - Books edited/written by staff member, alone/with others

Macdonald, A. J., Poulton, P. R., Clark, I. M., Scott, T., Glendining, M. J., Perryman, S. A. M., Storkey, J., Bell, J. R., Shield, I. F., Mcmillan, V. E. and Hawkins, J. M. B. Macdonald, A. J. (ed.) 2018. Rothamsted Long-term experiments : guide to the classical and other long-term experiments, datasets and sample archive. Rothamsted Research, Harpenden.

Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species

A - Papers appearing in refereed journals

Kersey, P. J., Allen, J. E., Allot, A., Barba, M., Boddu, S., Bolt, B. J., Carvalho-Silva, D., Christensen, M., Davis, P., Grabmueller, C., Kumar, N., Liu, Z., Maurel, T., Moore, B., Mcdowall, M. D., Maheswari, U., Naamati, G., Newman, V., Ong, C. K., Paulini, M., Pedro, H., Perry, E., Russell, M., Sparrow, H., Tapanari, E., Taylor, K., Vullo, A., Williams, G., Zadissia, A., Olson, A., Stein, J., Wei, S., Tello-Ruiz, M., Ware, D., Luciani, A., Potter, S., Finn, R. D., Urban, M., Hammond-Kosack, K. E., Bolser, D. M., De Silva, N., Howe, K. L., Langridge, N., Maslen, G., Staines, D. M. and Yates, A. 2018. Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species. Nucleic Acids Research. 46 (D1), pp. D802-D808. https://doi.org/10.1093/nar/gkx1011

Nutrient dynamics in wheat

A - Papers appearing in refereed journals

Hawkesford, M. J., Buchner, P. H. and Riche, A. B. 2018. Nutrient dynamics in wheat. Annual Plant Reviews online. 3 (November), pp. 1-14. https://doi.org/10.1002/9781119312994.apr0663

Sulfur metabolism in Allium cepa is hardly affected by chloride and sulfate salinity

A - Papers appearing in refereed journals

Aghajanzadeh, T. A., Reich, M., Hawkesford, M. J. and Burow, M. 2018. Sulfur metabolism in Allium cepa is hardly affected by chloride and sulfate salinity . Archives of Agronomy and Soil Science. https://doi.org/10.1080/03650340.2018.1540037

Phosphopantetheinyl transferase (Ppt)-mediated biosynthesis of lysine, but not siderophore or DHN melanin, is required for virulence of Zymoseptoria tritici on wheat

A - Papers appearing in refereed journals

Derbyshire, M. C., Gohari, A. M., Mehrabi, R., Kilaru, S., Steinberg, G., Ali, S., Bailey, A., Hammond-Kosack, K. E., Kema, G. H. J. and Rudd, J. J. 2018. Phosphopantetheinyl transferase (Ppt)-mediated biosynthesis of lysine, but not siderophore or DHN melanin, is required for virulence of Zymoseptoria tritici on wheat. Scientific Reports. 8 (17069). https://doi.org/10.1038/s41598-018-35223-8

Calcium ameliorates the toxicity of sulfate salinity in Brassica rapa

A - Papers appearing in refereed journals

Reich, M., Aghajanzadeh, T. A., Parmar, S., Hawkesford, M. J. and De Kok, L. J. 2018. Calcium ameliorates the toxicity of sulfate salinity in Brassica rapa. Journal of Plant Physiology. 231, pp. 1-8. https://doi.org/10.1016/j.jplph.2018.08.014

Perspective on wheat yield and quality with reduced nitrogen supply

A - Papers appearing in refereed journals

Zorb, C., Ludewig, U. and Hawkesford, M. J. 2018. Perspective on wheat yield and quality with reduced nitrogen supply. Trends in Plant Science. 23 (11), pp. 1029-1037. https://doi.org/10.1016/j.tplants.2018.08.012

The adaptation of Fusarium culmorum to DMI Fungicides Is Mediated by Major Transcriptome Modifications in Response to Azole Fungicide, Including the Overexpression of a PDR Transporter (FcABC1).

A - Papers appearing in refereed journals

Hellin, P., King, R., Urban, M., Hammond-Kosack, K. E. and Legreve, A 2018. The adaptation of Fusarium culmorum to DMI Fungicides Is Mediated by Major Transcriptome Modifications in Response to Azole Fungicide, Including the Overexpression of a PDR Transporter (FcABC1). Frontiers in Microbiology. 9 (1385). https://doi.org/10.3389/fmicb.2018.01385

Hidden variation in polyploid wheat drives local adaptation

A - Papers appearing in refereed journals

Gardiner, L.-J., Joynson, R., Omony, J., Rusholme-Pilcher, R., Olohan, L., Lang, D., Bai, C., Hawkesford, M. J., Salt, D., Spannagl, M., Mayer, K. F. X., Kenny, J., Bevan, M., Hall, N. and Hall, A. 2018. Hidden variation in polyploid wheat drives local adaptation. Genome Research. 28, pp. 1-14. https://doi.org/10.1101/gr.233551.117

Temperature and nitrogen supply interact to determine protein distribution gradients in the wheat grain endosperm

A - Papers appearing in refereed journals

Savill, G. P., Michalski, A., Powers, S. J., Wan, Y., Tosi, P., Buchner, P. H. and Hawkesford, M. J. 2018. Temperature and nitrogen supply interact to determine protein distribution gradients in the wheat grain endosperm. Journal of Experimental Botany. 69 (12), pp. 3117-3126. https://doi.org/10.1093/jxb/ery127

Inter-genome comparison of the Quorn fungus Fusarium venenatum and the closely related plant infecting pathogen Fusarium graminearum

A - Papers appearing in refereed journals

King, R., Brown, N. A., Urban, M. and Hammond-Kosack, K. E. 2018. Inter-genome comparison of the Quorn fungus Fusarium venenatum and the closely related plant infecting pathogen Fusarium graminearum. BMC Genomics. 19, p. 269. https://doi.org/10.1186/s12864-018-4612-2

Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate

A - Papers appearing in refereed journals

Giri, J., Bhosale, R., Huang, G., Pandey, B. K., Parker, H., Zappala, S., Yang, J., Dievart, A., Bureau, C., Ljung, K., Price, A., Rose, T., Larrieu, A., Mairhofer, S., Sturrock, C. J., White, P., Dupuy, L., Hawkesford, M. J., Perin, C., Liang, W., Peret, B., Hodgman, C. T., Lynch, J., Wissuwa, M., Zhang, D., Pridmore, T., Mooney, S. J., Guiderdoni, E., Swarup, R. and Bennett, M. J. 2018. Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate. Nature Communications. 9, p. 1408. https://doi.org/10.1038/s41467-018-03850-4

Elite UK winter wheat cultivars differ in their ability to support the colonisation of beneficial root-infecting fungi

A - Papers appearing in refereed journals

Osborne, S., Mcmillan, V. E., White, R. P. and Hammond-Kosack, K. E. 2018. Elite UK winter wheat cultivars differ in their ability to support the colonisation of beneficial root-infecting fungi. Journal of Experimental Botany. 69 (12), pp. 3103-3115. https://doi.org/10.1093/jxb/ery136

Exploring the resilience of wheat crops grown in short rotations through minimising the build-up of an important soil-borne fungal pathogen

A - Papers appearing in refereed journals

Mcmillan, V. E., Canning, G., Moughan, J., White, R. P., Gutteridge, R. J. and Hammond-Kosack, K. E. 2018. Exploring the resilience of wheat crops grown in short rotations through minimising the build-up of an important soil-borne fungal pathogen. Scientific Reports. 8 (9550), pp. 1-13. https://doi.org/10.1038/s41598-018-25511-8

Foxtail mosaic virus: a new viral vector for protein expression in cereals

A - Papers appearing in refereed journals

Bouton, C., King, R., Chen, H., Azhakanandam, K., Bieri, S., Hammond-Kosack, K. E. and Kanyuka, K. 2018. Foxtail mosaic virus: a new viral vector for protein expression in cereals. Plant Physiology. 177 (4), pp. 1352-1367. https://doi.org/10.1104/pp.17.01679

Sharing mutants and experimental information prepublication using FgMutantDb (https://scabusa.org/FgMutantDb)

A - Papers appearing in refereed journals

Baldwin, T. T., Basenko, E., Harb, O., Brown, N. A., Urban, M., Hammond-Kosack, K. E. and Bregitzer, P. P. 2018. Sharing mutants and experimental information prepublication using FgMutantDb (https://scabusa.org/FgMutantDb). Fungal Genetics and Biology. 115 (June), pp. 90-93. https://doi.org/10.1016/j.fgb.2018.01.002

Wheat receptor-kinase-like protein Stb6 controls gene-for-gene resistance to fungal pathogen Zymoseptoria tritici

A - Papers appearing in refereed journals

Saintennac, C., Lee, W. S., Cambon, F., Rudd, J. J., King, R., Marande, W., Powers, S. J., Berges, H., Phillips, A. L., Uauy, C., Hammond-Kosack, K. E., Langin, T. and Kanyuka, K. 2018. Wheat receptor-kinase-like protein Stb6 controls gene-for-gene resistance to fungal pathogen Zymoseptoria tritici. Nature Genetics. 50, pp. 368-374. https://doi.org/10.1038/s41588-018-0051-x

The electronic Rothamsted Archive (e-RA): an online resource for data from the Rothamsted long-term experiments

A - Papers appearing in refereed journals

Perryman, S. A. M., Castells-Brooke, N. I. D., Glendining, M. J., Goulding, K. W. T., Hawkesford, M. J., Macdonald, A. J., Ostler, R. J., Poulton, P. R., Rawlings, C. J., Scott, T. and Verrier, P. J. 2018. The electronic Rothamsted Archive (e-RA): an online resource for data from the Rothamsted long-term experiments. Scientific Data. 5, p. 180072. https://doi.org/10.1038/sdata.2018.72

Identification and expression profiling of Pht1 phosphate transporters in wheat in controlled environments and in the field

A - Papers appearing in refereed journals

Gruen, A., Buchner, P. H., Broadley, M. R. and Hawkesford, M. J. 2018. Identification and expression profiling of Pht1 phosphate transporters in wheat in controlled environments and in the field. Plant Biology. 20 (2), pp. 374-389. https://doi.org/10.1111/plb.12668

Phenotypic, comparative genomic and transcriptomic analysis of recently collected European Zymoseptoria tritici strains

C2 - Non-edited contributions to conferences

Chen, H., Bayon, C., King, R., Torriani, S. F. F., Bieri, S., Kanyuka, K., Hammond-Kosack, K. E. and Rudd, J. J. 2017. Phenotypic, comparative genomic and transcriptomic analysis of recently collected European Zymoseptoria tritici strains. Zymoseptoria Meeting, 2017, Kiel, Germany.

Stb6 is a wall-associated kinase gene that provides gene-for gene resistance against Zymoseptoria tritici in wheat

C2 - Non-edited contributions to conferences

Saintenac, C., Lee, W. S., Cambon, F., Rudd, J. J., King, R. A., Marande, W., Berges, H., Phillips, A. L., Uauy, C., Hammond-Kosack, K. E., Langin, T. and Kanyuka, K. 2017. Stb6 is a wall-associated kinase gene that provides gene-for gene resistance against Zymoseptoria tritici in wheat. Plant and animal genome conferernce XXV, Dan-Diego CA, USA, 14-18 January 2017. pp. Paper 23713

Host-induced gene silencing for the control of the Fusarium Head Blight in wheat fields

C2 - Non-edited contributions to conferences

Kanyuka, K., Machado, A., Urban, M., Lee, W. S., Brown, N. J., King, R. A., Lau, E. Y., Sparks, C. A., Bonato, A. L. V., Tibola, C. S., Martins, N. F., Aragao, F. J., West, J., Fernandes, J. M. C. and Hammond-Kosack, K. E. 2017. Host-induced gene silencing for the control of the Fusarium Head Blight in wheat fields. 1st COST iPlanta Conferernce; "Creating the plant RNAi research network CA15223", La Sapienza - CNR Headquarter , Rome, Italy, 15-17 February 2017.

RNAi as an emerging approach to control Fusarium Head Blight disease and mycotoxin contamination in cereals

A - Papers appearing in refereed journals

Machado, A., Brown, N. A., Urban, M., Kanyuka, K. and Hammond-Kosack, K. E. 2017. RNAi as an emerging approach to control Fusarium Head Blight disease and mycotoxin contamination in cereals. Pest Management Science. 74 (4), pp. 790-799. https://doi.org/10.1002/ps.4748

A spatial temporal analysis of the Fusarium graminearum transcriptome during symptomless and symptomatic wheat infection

A - Papers appearing in refereed journals

Brown, N. A., Evans, J., Mead, A. and Hammond-Kosack, K. E. 2017. A spatial temporal analysis of the Fusarium graminearum transcriptome during symptomless and symptomatic wheat infection. Molecular Plant Pathology. 18 (9), pp. 1295-1312. https://doi.org/10.1111/mpp.12564

A review of wheat diseases – a field perspective

A - Papers appearing in refereed journals

Figueroa, M., Hammond-Kosack, K. E. and Solomon, P. S. 2017. A review of wheat diseases – a field perspective. Molecular Plant Pathology. 19 (6), pp. 1523-1536. https://doi.org/10.1111/mpp.12618

Sulfate Transport in Plants: A Personal Perspective

B - Book chapters etc edited externally

Hawkesford, M. J. 2017. Sulfate Transport in Plants: A Personal Perspective. in: De Kok, L. J., Hawkesford, M. J., Haneklaus, S. H. and Schnug, E. (ed.) In: Sulfur Metabolism in Higher Plants - Fundamental, Environmental and Agricultural Aspects Springer International Publishing AG. pp. 3-12

Spatiotemporal expression patterns of wheat amino acid transporters reveal their putative roles in nitrogen transport and responses to abiotic stress

A - Papers appearing in refereed journals

Wan, Y., King, R., Mitchell, R. A. C., Hassani-Pak, K. and Hawkesford, M. J. 2017. Spatiotemporal expression patterns of wheat amino acid transporters reveal their putative roles in nitrogen transport and responses to abiotic stress. Scientific Reports. 7 (1), p. 5461. https://doi.org/10.1038/s41598-017-04473-3

Effects of selenium on plant metabolism and implications for crops and consumers

B - Book chapters etc edited externally

Schiavon, M., Lima, L. W., Jiang, Y. and Hawkesford, M. J. 2017. Effects of selenium on plant metabolism and implications for crops and consumers. in: Pilon-Smits, E. A. H., Winkel, L. H. E. and Lin, Z-Q. (ed.) Selenium in plants (Chapter 15) Springer International Publishing AG.

Use of a modified CRISPR/Cas9 construct to simultaneously mutagenize multiple genes in hexaploid wheat

C1 - Edited contributions to conferences/learned societies

Winfield, M., Allen, S., Cartlidge, L., Sparks, C. A., Jones, H., Huttly, A. K., Martignago, D., Hawkesford, M. J. and Edwards, K. 2017. Use of a modified CRISPR/Cas9 construct to simultaneously mutagenize multiple genes in hexaploid wheat. MonoGram 2017, 4-6 April, University of Bristol. Bristol, University of Bristol.

Genetic variation in traits for nitrogen use efficiency in wheat

A - Papers appearing in refereed journals

Hawkesford, M. J. 2017. Genetic variation in traits for nitrogen use efficiency in wheat. Journal of Experimental Botany. 68 (10), pp. 2627-2632. https://doi.org/10.1093/jxb/erx079

Automated method to determine two critical growth stages of wheat: heading and flowering

A - Papers appearing in refereed journals

Sadeghi-Tehran, P., Sabermanesh, K., Virlet, N. and Hawkesford, M. J. 2017. Automated method to determine two critical growth stages of wheat: heading and flowering. Frontiers in Plant Science. 8 (252). https://doi.org/10.3389/fpls.2017.00252

PHI-base: a new interface and further additions for the multi-species pathogen–host interactions database

A - Papers appearing in refereed journals

Urban, M., Cuzick, A., Rutherford, K., Irvine, A. G., Pedro, H., Pant, R., Sadanadan, V., Khamari, L., Billal, S., Mohanty, Sagar and Hammond-Kosack, K. E. 2017. PHI-base: a new interface and further additions for the multi-species pathogen–host interactions database. Nucleic Acids Research. 45 (D1), pp. D604-D610. https://doi.org/10.1093/nar/gkw1089

Nutrient use efficiency in wheat and prospects for improvement

C2 - Non-edited contributions to conferences

Hawkesford, M. J. 2017. Nutrient use efficiency in wheat and prospects for improvement. Plant nutrition, growth and environment interactions III International conference, Vienna, Austria, 20-21 February, 2017.

Plant phenotyping: increasing throughput and precision at multiple scales - Foreword

A - Papers appearing in refereed journals

Hawkesford, M. J. and Lorence, A. 2017. Plant phenotyping: increasing throughput and precision at multiple scales - Foreword. Functional Plant Biology. 44 (1), pp. V-VII. https://doi.org/10.1071/FPv44n1_FO

Methods to estimate changes in soil water for phenotyping root activity in the field

A - Papers appearing in refereed journals

Whalley, W. R., Binley, A., Watts, C. W., Shanahan, P., Dodd, I. C., Ober, E. S., Ashton, R. W., Webster, C. P., White, R. P. and Hawkesford, M. J. 2017. Methods to estimate changes in soil water for phenotyping root activity in the field. Plant and Soil. 415 (1-2), pp. 407-422. https://doi.org/10.1007/s11104-016-3161-1

mlo-based powdery mildew resistance in hexaploid bread wheat generated by a non-transgenic TILLING approach

A - Papers appearing in refereed journals

Acevedo-Garcia, J., Spencer, D., Thieron, H., Reinstädler, A., Hammond-Kosack, K. E., Phillips, A. L. and Panstruga, R. 2017. mlo-based powdery mildew resistance in hexaploid bread wheat generated by a non-transgenic TILLING approach. Plant Biotechnology Journal. 15 (3). https://doi.org/10.1111/pbi.12631

Annotation of Fusarium graminearum (PH-1) version 5.0

A - Papers appearing in refereed journals

King, R., Urban, M. and Hammond-Kosack, K. E. 2017. Annotation of Fusarium graminearum (PH-1) version 5.0. Genome Announcements. 5 (2), pp. e01479-16. https://doi.org/10.1128/genomeA.01479-16

Chloride and sulfate salinity differently affect biomass, mineral nutrient composition and expression of sulfate transport and assimilation genes in Brassica rapa

A - Papers appearing in refereed journals

Reich, M., Aghajanzadeh, T. A., Helm, J., Parmar, S., Hawkesford, M. J. and De Kok, L. J. 2017. Chloride and sulfate salinity differently affect biomass, mineral nutrient composition and expression of sulfate transport and assimilation genes in Brassica rapa. Plant and Soil. 411 (1), pp. 319-332. https://doi.org/10.1007/s11104-016-3026-7

System analysis of metabolism and the transcriptome in Arabidopsis thaliana roots reveals differential co-regulation upon iron, sulfur and potassium deficiency

A - Papers appearing in refereed journals

Forieri, I., Sticht, C., Reichelt, M., Gretz, N., Hawkesford, M. J., Malagoli, M., Wirtz, M. and Hell, R. 2017. System analysis of metabolism and the transcriptome in Arabidopsis thaliana roots reveals differential co-regulation upon iron, sulfur and potassium deficiency. Plant, Cell and Environment. 40 (1), pp. 95-107. https://doi.org/10.1111/pce.12842

A conserved fungal glycosyltransferase facilitates pathogenesis of plants by enabling hyphal growth on solid surfaces

A - Papers appearing in refereed journals

King, R., Urban, M., Lauder, R. P., Hawkins, N. J., Evans, M., Plummer, A., Halsey, K., Lovegrove, A., Hammond-Kosack, K. E. and Rudd, J. J. 2017. A conserved fungal glycosyltransferase facilitates pathogenesis of plants by enabling hyphal growth on solid surfaces. PLOS Pathogens. 13 (10), p. e1006672. https://doi.org/10.1371/journal.ppat.1006672

The role of ZIP transporters and group F bZIP transcription factors in the Zn-deficiency response of wheat (Triticum aestivum).

A - Papers appearing in refereed journals

Evens, N. P., Buchner, P. H., Williams, L. E. and Hawkesford, M. J. 2017. The role of ZIP transporters and group F bZIP transcription factors in the Zn-deficiency response of wheat (Triticum aestivum). The Plant Journal. 92 (2), pp. 291-304. https://doi.org/10.1111/tpj.13655

Enhanced Plant Rooting and Crop System Management for Improved N Use Efficiency

B - Book chapters etc edited externally

Rosolem, C. A., Ritz, K., Cantarella, H., Hawkesford, M. J., Whalley, W. R. and Mooney, S. J. 2017. Enhanced Plant Rooting and Crop System Management for Improved N Use Efficiency. in: Sparks, D. L. (ed.) Advances in Agronomy Vol.146 Academic Press Inc Elsevier Science.

Characterization of the wheat leaf metabolome during grain filling and under varied N-supply

A - Papers appearing in refereed journals

Heyneke, E., Watanabe, M., Erban, A, Duan, G, Buchner, P. H., Walther, D., Kopka, J, Hawkesford, M. J. and Hoefgen, R. 2017. Characterization of the wheat leaf metabolome during grain filling and under varied N-supply. Frontiers in Plant Science. 8 (2048), pp. 1-18. https://doi.org/10.3389/fpls.2017.02048

Multi-feature machine learning model for automatic segmentation of green fractional vegetation cover for high-throughput field phenotyping

A - Papers appearing in refereed journals

Sadeghi-Tehran, P., Virlet, N., Sabermanesh, K. and Hawkesford, M. J. 2017. Multi-feature machine learning model for automatic segmentation of green fractional vegetation cover for high-throughput field phenotyping. Plant Methods. 13 (103), pp. 1-16. https://doi.org/10.1186/s13007-017-0253-8

GPCRs from fusarium graminearum detection, modeling and virtual screening - the search for new routes to control head blight disease.

A - Papers appearing in refereed journals

Bresso, E., Togawa, R., Hammond-Kosack, K. E., Urban, M., Maigret, B. and Martins, N. F. 2016. GPCRs from fusarium graminearum detection, modeling and virtual screening - the search for new routes to control head blight disease. BMC Bioinformatics. 17 (Suppl 18), p. 463. https://doi.org/10.1186/s12859-016-1342-9

Improving the uptake and assimilation of nitrogen in wheat plants

B - Book chapters etc edited externally

Le Gouis, J. and Hawkesford, M. J. 2016. Improving the uptake and assimilation of nitrogen in wheat plants. in: Langridge, P. (ed.) Achieving sustainable cultivation of wheat. Volume 1: Breeding, quality traits, pests and diseases. Burleigh Dodds.

Pseudomonas spp. diversity is negatively associated with suppression of the wheat take-all pathogen

A - Papers appearing in refereed journals

Mehrabi, Z., Mcmillan, V. E., Clark, I. M., Canning, G., Hammond-Kosack, K. E., Preston, G., Hirsch, P. R. and Mauchline, T. H. 2016. Pseudomonas spp. diversity is negatively associated with suppression of the wheat take-all pathogen. Scientific Reports. 6. https://doi.org/10.1038/srep29905

High throughput field phenotyping of wheat plant height and growth rate in field plot trials using UAV based remote sensing

A - Papers appearing in refereed journals

Holman, F. H., Riche, A. B., Michalski, A., Castle, M., Wooster, M. J. and Hawkesford, M. J. 2016. High throughput field phenotyping of wheat plant height and growth rate in field plot trials using UAV based remote sensing. Remote Sensing. 8 (12), p. 1031. https://doi.org/10.3390/rs8121031

An evolutionary conserved wall-associated kinase like protein controls gene-for gene resistance to Zymoseptoria tritici in wheat

C2 - Non-edited contributions to conferences

Saintenac, C., Lee, W-S., Cambon, F., Rudd, J. J., King, R., Phillips, A. L., Uauy, C., Hammond-Kosack, K. E., Langin, T. and Kanyuka, K. 2016. An evolutionary conserved wall-associated kinase like protein controls gene-for gene resistance to Zymoseptoria tritici in wheat. Achieving durable resistance to wheat diseases and pests, Minneapolis, Bloomington, Minnesota, 2-3 November, 2016. pp. 22

Resurrecting a 750-year-old plant virus

C2 - Non-edited contributions to conferences

Bouton, C., Smith, O., Ruiz-Rivero, O., Allaby, R., Hammond-Kosack, K. E. and Kanyuka, K. 2016. Resurrecting a 750-year-old plant virus. Abstracts Internation Advances in Plant Virology, Univerity of Greenwich, Greenwich, UK, 7-9 September, 2016.

A genomics approach to identify effectors in Rhynchosporium commune essential for pathogenicity on barley

C2 - Non-edited contributions to conferences

Ford, K., Gamble, L., Griffe, L., Berepiki, A., Epihov, D., Knogge, W., Newton, A., Hammond-Kosack, K. E., Kanyuka, K. and Arova, A. 2016. A genomics approach to identify effectors in Rhynchosporium commune essential for pathogenicity on barley. Abstracts 13th European Conferernce on Fungal Genetics , Paris France , 3-6 April, 2016. pp. CS2M39

The wheat Stb6 gene controlling a gene-for-gene resistance to Zymoseptoria tritici encodes a wall-associated kinase like protein

C2 - Non-edited contributions to conferences

Saintenac, C., Lee, W-S., Cambon, F., Rudd, J. J., King, R., Phillips, A. L., Uauy, C., Hammond-Kosack, K. E., Langin, T. and Kanyuka, K. 2016. The wheat Stb6 gene controlling a gene-for-gene resistance to Zymoseptoria tritici encodes a wall-associated kinase like protein. Abstracts IS-MPMI XVII Congress, Portland, Oregon, USA, 17-21 July, 2016. pp. Abstract Number: C18-4, P15-434

Wheat homologues of BAK1 contribute to basal resistance against Zymoseptoria tritici and Fusarium graminearum

C2 - Non-edited contributions to conferences

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2016. Wheat homologues of BAK1 contribute to basal resistance against Zymoseptoria tritici and Fusarium graminearum. IS-MPMI XVII Conress, Portland, Oregon, USA, 17-21 July, 2016. pp. Abstract Number P18-680

Using the phenotypic information in the pathogen-host interactions database (PHI-BASE) to explore Fusarium and Magnaporthe genomes, transcriptomes and proteomes

C1 - Edited contributions to conferences/learned societies

Urban, M., Irvine, A., Cuzick, A. and Hammond-Kosack, K. E. 2016. Using the phenotypic information in the pathogen-host interactions database (PHI-BASE) to explore Fusarium and Magnaporthe genomes, transcriptomes and proteomes. Proceedings 5th ISFHB - 2nd IWWB Symposium, 5-10, Florianopolis, Brasil.

First draft genome sequence of a UK strain (UK99) of Fusarium culmorum

A - Papers appearing in refereed journals

Urban, M., King, R., Andongabo, A. E., Maheswari, U., Pedro, H., Kersey, P. and Hammond-Kosack, K. E. 2016. First draft genome sequence of a UK strain (UK99) of Fusarium culmorum. Genome Announcements. 4 (5), pp. e00771-16. https://doi.org/10.1128/genomeA.00771-16

The genome of the emerging barley pathogen Ramularia collo-cygni

A - Papers appearing in refereed journals

McGrann, G. R. D., Andongabo, A. E., Sjokvist, E., Trivedi, U., Dussart, F., Kaczmarek, M., Mackenzie, A., Fountaine, J. M., Taylor, J. M. G., Paterson, L. J., Gorniak, K., Burnett, F., Kanyuka, K., Hammond-Kosack, K. E., Rudd, J. J., Blaxter, M. and Havis, N. D. 2016. The genome of the emerging barley pathogen Ramularia collo-cygni. BMC Genomics. 17 (1), p. 584. https://doi.org/10.1186/s12864-016-2928-3

Genome-wide analysis of autophagy-associated genes in foxtail millet (Setaria italica L.) and characterization of the function of SiATG8a in conferring tolerance to nitrogen starvation in rice

A - Papers appearing in refereed journals

Li, W. W., Chen, M., Wang, E. H., Hu, L. Q., Hawkesford, M. J., Zhong, L., Chen, Z., Xu, Z. S., Li, L. C., Zhou, Y. B., Guo, C. H. and Ma, Y. Z. 2016. Genome-wide analysis of autophagy-associated genes in foxtail millet (Setaria italica L.) and characterization of the function of SiATG8a in conferring tolerance to nitrogen starvation in rice. BMC Genomics. 17 (797), pp. 1-16. https://doi.org/10.1186/s12864-016-3113-4

Field Scanalyzer: An automated robotic field phenotyping platform for detailed crop monitoring

A - Papers appearing in refereed journals

Virlet, N., Sabermanesh, K., Sadeghi-Tehran, P. and Hawkesford, M. J. 2016. Field Scanalyzer: An automated robotic field phenotyping platform for detailed crop monitoring. Functional Plant Biology. 44 (1), pp. 143-153. https://doi.org/10.1071/FP16163

A role for BAK1 in the Zymoseptoria tritici-wheat interaction

C2 - Non-edited contributions to conferences

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2016. A role for BAK1 in the Zymoseptoria tritici-wheat interaction. Abstracts 9th International Symposium on Septoria Diseases of Cereals, Paris, 7-9 April 2016.

Structure-based virtual screening of hypothetical inhibitors of the enzyme longiborneal synthase - a potential target to reduce Fusarium head blight disease

A - Papers appearing in refereed journals

Bresso, E., Leroux, V., Urban, M., Hammond-Kosack, K. E., Maigret, B. and Martins, N. F. 2016. Structure-based virtual screening of hypothetical inhibitors of the enzyme longiborneal synthase - a potential target to reduce Fusarium head blight disease. Journal Of Molecular Modeling. 22, p. 163. https://doi.org/10.1007/s00894-016-3021-1

Publishing FAIR data: an exemplar methodology utilizing PHI-base

A - Papers appearing in refereed journals

Rodriguez-Iglesias, A., Rodriguez-Gonzales, A., Irvine, A. G., Sesma, A., Urban, M., Hammond-Kosack, K. E. and Wilkinson, M. D. 2016. Publishing FAIR data: an exemplar methodology utilizing PHI-base. Frontiers in Plant Science. 7, p. 641. https://doi.org/10.3389/fpls.2016.00641

Interactions of sulfate with other nutrients as revealed by H2S fumigation of Chinese cabbage

A - Papers appearing in refereed journals

Reich, M., Shahbaz, M., Prajapati, D. H., Parmar, S., Hawkesford, M. J. and De Kok, L. J. 2016. Interactions of sulfate with other nutrients as revealed by H2S fumigation of Chinese cabbage. Frontiers in Plant Science. 7, p. 541. https://doi.org/10.3389/fpls.2016.00541

Deep roots and soil structure

A - Papers appearing in refereed journals

Gao, W., Hodgkinson, L., Jin, K., Watts, C. W., Ashton, R. W., Shen, J., Ren, T., Dodd, I. C., Binley, A., Phillips, A. L., Hedden, P., Hawkesford, M. J. and Whalley, W. R. 2016. Deep roots and soil structure. Plant, Cell and Environment. 39 (8), pp. 1662-1668. https://doi.org/10.1111/pce.12684

Leaf photosynthesis and associations with grain yield, biomass and nitrogen-use efficiency in landraces, synthetic-derived lines and cultivars in wheat

A - Papers appearing in refereed journals

Gaju, O., DeSilva, J., Carvalho, P., Hawkesford, M. J., Griffiths, S., Greenland, A. and Foulkes, M. J. 2016. Leaf photosynthesis and associations with grain yield, biomass and nitrogen-use efficiency in landraces, synthetic-derived lines and cultivars in wheat. Field Crops Research. 193, pp. 1-15. https://doi.org/10.1016/j.fcr.2016.04.018

Cloning of Stb6 - the first gene conferring race-specific resistance against the Septoria tritici blotch disease

C2 - Non-edited contributions to conferences

Kanyuka, K., Saintenac, C., Lee, W-S., Cambon, F., King, R., Phillips, A. L., Uauy, C., Hammond-Kosack, K. E. and Langin, T. 2016. Cloning of Stb6 - the first gene conferring race-specific resistance against the Septoria tritici blotch disease. Abstracts 9th International Symposium on Septoria Diseases of Cereals, Paris, 7-9 April 2016.

The dynamics of protein body formation in developing wheat grain

A - Papers appearing in refereed journals

Moore, K. L., Tosi, P., Palmer, R., Hawkesford, M. J., Grovenor, C. R. M. and Shewry, P. R. 2016. The dynamics of protein body formation in developing wheat grain. Plant Biotechnology Journal. 14 (9), pp. 1876-1882. https://doi.org/10.1111/pbi.12549

Atmospheric H2S and SO2 as sulfur sources for Brassica juncea and Brassica rapa: regulation of sulfur uptake and assimilation

A - Papers appearing in refereed journals

Aghajanzadeh, T. A., Hawkesford, M. J. and De Kok, L. J. 2016. Atmospheric H2S and SO2 as sulfur sources for Brassica juncea and Brassica rapa: regulation of sulfur uptake and assimilation. Environmental and Experimental Botany. 124, pp. 1-10. https://doi.org/10.1016/j.envexpbot.2015.12.001

PhytoPath: an integrative resource for plant pathogen genomics

A - Papers appearing in refereed journals

Pedro, H., Maheswari, U., Urban, M., Irvine, A. G., Cuzick, A., Mcdowall, M. D., Staines, D. M., Kulesha, E., Hammond-Kosack, K. E. and Kersey, P. J. 2016. PhytoPath: an integrative resource for plant pathogen genomics. Nucleic Acids Research. 44 (D1), pp. D688-D693. https://doi.org/10.1093/nar/gkv1052

Temperature determines size and direction of effects of elevated CO2 and nitrogen form on yield quantity and quality of Chinese cabbage

A - Papers appearing in refereed journals

Reich, M., Van Den Meerakker, A. N., Parmar, S., Hawkesford, M. J. and De Kok, L. J. 2016. Temperature determines size and direction of effects of elevated CO2 and nitrogen form on yield quantity and quality of Chinese cabbage. Plant Biology. 18(Supplement 1), pp. 63-75. https://doi.org/10.1111/plb.12396

The trans-kingdom identification of negative regulators of pathogen hypervirulence

A - Papers appearing in refereed journals

Brown, N. A., Urban, M. and Hammond-Kosack, K. E. 2016. The trans-kingdom identification of negative regulators of pathogen hypervirulence. FEMS Microbiology Reviews. 40 (1), pp. 19-40. https://doi.org/10.1093/femsre/fuv042

Uniting genetics and chemistry to reduce the risk of take-all disease in 2nd wheat crops

C1 - Edited contributions to conferences/learned societies

Moughan, J., Mcmillan, V. E., Melichar, J., Ranner, D., Thornton, C., Whalley, W. R. and Hammond-Kosack, K. E. 2015. Uniting genetics and chemistry to reduce the risk of take-all disease in 2nd wheat crops. Abstracts 9th Symposium International Society for Root Research (ISRR) "Roots Down Under", Canberra, Australia, 6-9 Octomber, 2015. pp. P90

Exploring the susceptibility of cereal species to Phialophora fungi

C1 - Edited contributions to conferences/learned societies

Osborne, S., Mcmillan, V. E., Whalley, W. R., Foulkes, J. and Hammond-Kosack, K. E. 2015. Exploring the susceptibility of cereal species to Phialophora fungi. Abstracts Molecular Biology of Plant Pathogens Conference (MBPP), University of West England, Bristol, 8-9 April, 2015. pp. 56

Plant fungal resistance gene. WO2017103582 (A1)

H1 - Patents granted

Kanyuka, K., Saintenac, C., Cambon, F., Langin, T., Lee, W-S. and Hammond-Kosack, K. E. 2015. Plant fungal resistance gene. WO2017103582 (A1).

Responses to plant pathogens

B - Book chapters etc edited externally

Hammond-Kosack, K. E. and Jones, J. D. G. 2015. Responses to plant pathogens. in: Jones, R. L., Buchanan, B. B. and Gruissem, W. (ed.) Biochemistry and molecular biology of plants, 2nd ed John Wiley & Sons Chichester, West Sussex. pp. 984-1050

Investigating a potential link between take-all disease progression and root system phenotypes in two important elite winter wheat cultivars

G - Articles in popular magazines and other technical publications

Baggs, E., Moughan, J., Mcmillan, V. E. and Hammond-Kosack, K. E. 2015. Investigating a potential link between take-all disease progression and root system phenotypes in two important elite winter wheat cultivars. BSPP News. 78, pp. 34-35.

Secreted biomolecules in fungal plant pathogenesis

B - Book chapters etc edited externally

Brown, N. A. and Hammond-Kosack, K. E. 2015. Secreted biomolecules in fungal plant pathogenesis. in: Gupta, V. K., Sreenivasaprasad, S. and Mach, R. L. (ed.) Fungal biomolecules: sources, applications and recent developments John Wiley & Sons Chichester, West Sussex. pp. 263-310

An analysis of Pseudomonas genomic diversity in take-all infected wheat fields reveals the lasting impact of wheat cultivars on the soil microbiota

A - Papers appearing in refereed journals

Mauchline, T. H., Chedom-Fotso, D., Chandra, G., Samuels, T., Greenaway, N., Backhaus, A., Mcmillan, V. E., Canning, G., Powers, S. J., Hammond-Kosack, K. E., Hirsch, P. R., Clark, I. M., Mehrabi, Z., Roworth, J., Burnell, J. and Malone, J. G. 2015. An analysis of Pseudomonas genomic diversity in take-all infected wheat fields reveals the lasting impact of wheat cultivars on the soil microbiota. Environmental Microbiology. 17 (11), pp. 4764-4778. https://doi.org/10.1111/1462-2920.13038

Atmospheric H2S and SO2 as sulfur source for Brassica juncea and Brassica rapa: impact on the glucosinolate composition

A - Papers appearing in refereed journals

Aghajanzadeh, T. A., Kopriva, S., Hawkesford, M. J., Koprivova, A. and De Kok, L. J. 2015. Atmospheric H2S and SO2 as sulfur source for Brassica juncea and Brassica rapa: impact on the glucosinolate composition. Frontiers in Plant Science. 6, p. 924. https://doi.org/10.3389/fpls.2015.00924

Host to a stranger: Arabidopsis and Fusarium ear blight

A - Papers appearing in refereed journals

Brewer, H. C. and Hammond-Kosack, K. E. 2015. Host to a stranger: Arabidopsis and Fusarium ear blight. Trends in Plant Science. 20, pp. 651-663. https://doi.org/10.1016/j.tplants.2015.06.011

Using the pathogen-host interactions database (PHI-base) to investigate plant pathogen genomes and genes implicated in virulence

A - Papers appearing in refereed journals

Urban, M., Irvine, A. G., Cuzick, A. and Hammond-Kosack, K. E. 2015. Using the pathogen-host interactions database (PHI-base) to investigate plant pathogen genomes and genes implicated in virulence. Frontiers in Plant Science. 6, p. 605. https://doi.org/10.3389/fpls.2015.00605

The completed genome sequence of the pathogenic ascomycete fungus Fusarium graminearum

A - Papers appearing in refereed journals

King, R., Urban, M., Hammond-Kosack, M. C. U., Hassani-Pak, K. and Hammond-Kosack, K. E. 2015. The completed genome sequence of the pathogenic ascomycete fungus Fusarium graminearum. BMC Genomics. 16, p. 544. https://doi.org/10.1186/s12864-015-1756-1

Analysis of cytochrome b5 reductase-mediated metabolism in the phytopathogenic fungus Zymoseptoria tritici reveals novel functionalities implicated in virulence

A - Papers appearing in refereed journals

Derbyshire, M. C., Michaelson, L. V., Parker, J., Kelly, S., Thacker, U., Powers, S. J., Bailey, A., Hammond-Kosack, K. E., Courbot, M. and Rudd, J. J. 2015. Analysis of cytochrome b5 reductase-mediated metabolism in the phytopathogenic fungus Zymoseptoria tritici reveals novel functionalities implicated in virulence. Fungal Genetics and Biology. 82 (September), pp. 69-84. https://doi.org/10.1016/j.fgb.2015.05.008

An interspecies comparative analysis of the predicted secretomes of the necrotrophic plant pathogens Sclerotinia sclerotiorum and Botrytis cinerea

A - Papers appearing in refereed journals

Heard, S., Brown, N. A. and Hammond-Kosack, K. E. 2015. An interspecies comparative analysis of the predicted secretomes of the necrotrophic plant pathogens Sclerotinia sclerotiorum and Botrytis cinerea. PLOS ONE. 10, p. e0130534. https://doi.org/10.1371/journal.pone.0130534

Whole-genome analysis of Fusarium graminearum insertional mutants identifies virulence associated genes and unmasks untagged chromosomal deletions

A - Papers appearing in refereed journals

Urban, M., King, R., Hassani-Pak, K. and Hammond-Kosack, K. E. 2015. Whole-genome analysis of Fusarium graminearum insertional mutants identifies virulence associated genes and unmasks untagged chromosomal deletions. BMC Genomics. 16, p. 261. https://doi.org/10.1186/s12864-015-1412-9

Deregulation of plant cell death through disruption of chloroplast functionality affects asexual sporulation of Zymoseptoria tritici on wheat

A - Papers appearing in refereed journals

Lee, W-S., Devonshire, B. J., Hammond-Kosack, K. E., Rudd, J. J. and Kanyuka, K. 2015. Deregulation of plant cell death through disruption of chloroplast functionality affects asexual sporulation of Zymoseptoria tritici on wheat. Molecular Plant-Microbe Interactions - MPMI. 28, pp. 590-604. https://doi.org/10.1094/MPMI-10-14-0346-R

Expression patterns of C- and N-metabolism related genes in wheat are changed during senescence under elevated CO2 in dry-land agriculture

A - Papers appearing in refereed journals

Buchner, P. H., Tausz, M., Ford, R., Leo, A., Fitzgerald, G. J., Hawkesford, M. J. and Tausz-Posch, S. 2015. Expression patterns of C- and N-metabolism related genes in wheat are changed during senescence under elevated CO2 in dry-land agriculture. Plant Science. 236, pp. 239-249. https://doi.org/10.1016/j.plantsci.2015.04.006

In planta transient expression systems for monocots

B - Book chapters etc edited externally

Lee, W-S., Hammond-Kosack, K. E. and Kanyuka, K. 2015. In planta transient expression systems for monocots. in: Davey, M. R., Azhakanandam, K., Daniell, H. and Silverstone, A. (ed.) Recent advancements in gene expression and enabling technologies in crop plants Springer, New York. pp. 391-432

Transcriptome and metabolite profiling of the infection cycle of Zymoseptoria tritici on wheat reveals a biphasic interaction with plant immunity involving differential pathogen chromosomal contributions and a variation on the hemibiotrophic lifestyle definition

A - Papers appearing in refereed journals

Rudd, J. J., Kanyuka, K., Hassani-Pak, K., Derbyshire, M., Andongabo, A. E., Devonshire, J., Lysenko, A., Saqi, M., Desai, N. M., Powers, S. J., Hooper, J., Ambroso, L., Bharti, A., Farmer, A., Hammond-Kosack, K. E., Dietrich, R. A. and Courbot, M. 2015. Transcriptome and metabolite profiling of the infection cycle of Zymoseptoria tritici on wheat reveals a biphasic interaction with plant immunity involving differential pathogen chromosomal contributions and a variation on the hemibiotrophic lifestyle definition. Plant Physiology. 167 (3), pp. 1158-1185. https://doi.org/10.1104/pp.114.255927

Overexpression of a NAC transcription factor delays leaf senescence and increases grain nitrogen concentration in wheat

A - Papers appearing in refereed journals

Zhao, D., Derkx, A. P., Liu, D-C., Buchner, P. H. and Hawkesford, M. J. 2015. Overexpression of a NAC transcription factor delays leaf senescence and increases grain nitrogen concentration in wheat. Plant Biology. 17 (4), pp. 904-913. https://doi.org/10.1111/plb.12296

The Pathogen-Host Interactions database (PHI-base): additions and future developments

A - Papers appearing in refereed journals

Urban, M., Pant, R., Raghunath, A., Irvine, A. G., Pedro, H. and Hammond-Kosack, K. E. 2015. The Pathogen-Host Interactions database (PHI-base): additions and future developments. Nucleic Acids Research. 43, pp. D645-D655. https://doi.org/10.1093/nar/gku1165

Functional analysis of a wheat homeodomain protein, TaR1, reveals that host chromatin remodelling influences the dynamics of the switch to necrotrophic growth in the phytopathogenic fungus Zymoseptoria tritici

A - Papers appearing in refereed journals

Lee, J., Orosa, B., Millyard, L., Edwards, M., Kanyuka, K., Gatehouse, A., Rudd, J. J., Hammond-Kosack, K. E., Pain, N. and Sadanandom, A. 2015. Functional analysis of a wheat homeodomain protein, TaR1, reveals that host chromatin remodelling influences the dynamics of the switch to necrotrophic growth in the phytopathogenic fungus Zymoseptoria tritici. New Phytologist. 206 (2), pp. 598-605. https://doi.org/10.1111/nph.13323

Transcriptome and metabolome analysis of plant sulfate starvation and resupply provides novel information on transcriptional regulation of metabolism associated with sulfur, nitrogen and phosphorus nutritional responses in Arabidopsis

A - Papers appearing in refereed journals

Bielecka, M., Watanabe, M., Morcuende, R., Scheible, W-R., Hawkesford, M. J., Hesse, H. and Hoefgen, R. 2015. Transcriptome and metabolome analysis of plant sulfate starvation and resupply provides novel information on transcriptional regulation of metabolism associated with sulfur, nitrogen and phosphorus nutritional responses in Arabidopsis. Frontiers in Plant Science. 5, p. 805. https://doi.org/10.3389/fpls.2014.00805

A novel approach to identify genes that determine grain protein deviation in cereals

A - Papers appearing in refereed journals

Mosleth, E. F., Wan, Y., Lysenko, A., Chope, G. A., Penson, S. P., Shewry, P. R. and Hawkesford, M. J. 2015. A novel approach to identify genes that determine grain protein deviation in cereals. Plant Biotechnology Journal. 13 (5), pp. 625-635. https://doi.org/10.1111/pbi.12285

Mutations in the Arabidopsis homoserine kinase gene DMR1 confer enhanced resistance to Fusarium culmorum and F. graminearum

A - Papers appearing in refereed journals

Brewer, H. C., Hammond-Kosack, K. E. and Hawkins, N. D. 2014. Mutations in the Arabidopsis homoserine kinase gene DMR1 confer enhanced resistance to Fusarium culmorum and F. graminearum. BMC Plant Biology. 14, p. 317. https://doi.org/10.1186/s12870-014-0317-0

The significance of glucosinolates for sulfur storage in Brassicaceae seedlings

A - Papers appearing in refereed journals

Aghajanzadeh, T. A., Hawkesford, M. J. and De Kok, L. J. 2014. The significance of glucosinolates for sulfur storage in Brassicaceae seedlings. Frontiers in Plant Science. 5, p. 704. https://doi.org/10.3389/fpls.2014.00704

Nutrient use efficiency in plants: concepts and approaches

E - Books edited/written by staff member, alone/with others

Hawkesford, M. J., Kopriva, S. and De Kok, L. J. 2014. Nutrient use efficiency in plants: concepts and approaches. Springer, Cham.

Efficient mineral nutrition: genetic improvement of phosphate uptake and use efficiency in crops

B - Book chapters etc edited externally

Gruen, A., Broadley, M. R., Buchner, P. H. and Hawkesford, M. J. 2014. Efficient mineral nutrition: genetic improvement of phosphate uptake and use efficiency in crops. in: Kopriva, S., Dekok, L. J. and Hawksford, M. J. (ed.) Nutrition use efficiency in plants Springer, Cham. pp. 93-132

Functional characterisation of members of the cytochrome B5 reductase gene family in the wheat-infecting fungus Zymoseptoria tritici

C2 - Non-edited contributions to conferences

Derbyshire, M., Courbot, M., Hammond-Kosack, K. E., Michaelson, L. V., Parker, J., Thacker, U., Li, N., Bailey, A. and Rudd, J. J. 2014. Functional characterisation of members of the cytochrome B5 reductase gene family in the wheat-infecting fungus Zymoseptoria tritici. Abstracts 16th International Congress on Molecular Plant-Microbe Interactions, Rhodes, 6-10 July 2014 . pp. P703

Zinc exposure has differential effects on uptake and metabolism of sulfur and nitrogen in Chinese cabbage

A - Papers appearing in refereed journals

Stuiver, C. E. E., Posthumus, F. S., Parmar, S., Shahbaz, M., Hawkesford, M. J. and De Kok, L. J. 2014. Zinc exposure has differential effects on uptake and metabolism of sulfur and nitrogen in Chinese cabbage. Journal of Plant Nutrition and Soil Science. 177 (5), pp. 748-757. https://doi.org/10.1002/jpln.201300369

A tale of one fungal pathogen of wheat: how it evades host surveillance and then hijacks host defences

C2 - Non-edited contributions to conferences

Kanyuka, K., Lysenko, A., Saqi, M., Derbyshire, M., Andongabo, A. E., Hassani-Pak, K., Hammond-Kosack, K. E., Courbot, M. and Rudd, J. J. 2014. A tale of one fungal pathogen of wheat: how it evades host surveillance and then hijacks host defences. Abstracts 16th International Congress on Molecular Plant-Microbe Interactions (IS-MPMI 2014), Rhodes, 6-10 July 2014 . pp. P069

Identification and analysis of differentially expressed genes in the wheat- Zymoseptoria tritici interaction

C2 - Non-edited contributions to conferences

Kanyuka, K., Andongabo, A. E., Hassani-Pak, K., Powers, S. J., Lysenko, A., Saqi, M., Derbyshire, M., Lee, W-S., Hammond-Kosack, K. E., Courbot, M. and Rudd, J. J. 2014. Identification and analysis of differentially expressed genes in the wheat- Zymoseptoria tritici interaction. Abstracts Plant Genomics Congress, London, 12-13 May 2014 .

Rhynchosporium commune effector compliment and their role in pathogenicity on barley

C2 - Non-edited contributions to conferences

Avrova, A., Gamble, L., Griffe, L., Franco Orozco, B., Ruiz, O., Munsterkotter, M., Knogge, W., Newton, A., Birch, P., Hammond-Kosack, K. E. and Kanyuka, K. 2014. Rhynchosporium commune effector compliment and their role in pathogenicity on barley. Abstracts 16th International Congress on Molecular Plant-Microbe Interactions (IS-MPMI 2014), Rhodes, 6-10 July 2014 . pp. P335

Rhynchosporium commune effectors identification and exploitation

C2 - Non-edited contributions to conferences

Avrova, A., Gamble, L., Griffe, L., Franco Orozco, B., Ruiz, O., Munsterkotter, M., Looseley, M., Knogge, W., Newton, A., Birch, P., Hammond-Kosack, K. E. and Kanyuka, K. 2014. Rhynchosporium commune effectors identification and exploitation. Abstracts 1st International Workshop on Barley Leaf Diseases, Salsomaggiore Terme, 3-6 June 2014 .

Identification of Rhynchosporium commune avirulence genes through genome wide association and their recognition by the host plant barley

C2 - Non-edited contributions to conferences

Avrova, A., Gamble, L., Griffe, L., Franco Orozco, B., Ruiz, O., Munsterkotter, M., Knogge, W., Newton, A., Hammond-Kosack, K. E. and Kanyuka, K. 2014. Identification of Rhynchosporium commune avirulence genes through genome wide association and their recognition by the host plant barley. Abstracts 10th International Mycological Congress, Bangkok, 3-8 August 2014 .

From Rhynchosporium commune genome sequence to barley resistance

C2 - Non-edited contributions to conferences

Avrova, A., Gamble, L., Griffe, L., Ruiz, O., Munsterkotter, M., Knogge, W., Newton, A., Birch, P. R. J., Hammond-Kosack, K. E. and Kanyuka, K. 2014. From Rhynchosporium commune genome sequence to barley resistance. Abstracts Crop Protection in Northern Britain, Dundee, 25-26 February 2014 .

Identifying variation in resistance to the take-all fungus, Gaeumannomyces graminis var. tritici, between different ancestral and modern wheat species

A - Papers appearing in refereed journals

Mcmillan, V. E., Gutteridge, R. J. and Hammond-Kosack, K. E. 2014. Identifying variation in resistance to the take-all fungus, Gaeumannomyces graminis var. tritici, between different ancestral and modern wheat species. BMC Plant Biology. 14, p. 212. https://doi.org/10.1186/s12870-014-0212-8

Biotechnology: plant protection

B - Book chapters etc edited externally

Hammond-Kosack, K. E. 2014. Biotechnology: plant protection. in: Vanalfen, N. K. (ed.) Encyclopedia of agriculture and food systems, Vol. 2 Elsevier, San Diego. pp. 134-152

Complex phylogeny and gene expression patterns of members of the NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family (NPF) in wheat

A - Papers appearing in refereed journals

Buchner, P. H. and Hawkesford, M. J. 2014. Complex phylogeny and gene expression patterns of members of the NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER family (NPF) in wheat. Journal of Experimental Botany. 65, pp. 5697-5710. https://doi.org/10.1093/jxb/eru231

Effects of genotype, season and nitrogen nutrition on gene expression and protein accumulation in wheat grain

A - Papers appearing in refereed journals

Chope, G. A., Wan, Y., Penson, S. P., Bhandari, D. G., Powers, S. J., Shewry, P. R. and Hawkesford, M. J. 2014. Effects of genotype, season and nitrogen nutrition on gene expression and protein accumulation in wheat grain. Journal of Agricultural and Food Chemistry - JAFC. 62, pp. 4399-4407. https://doi.org/10.1021/jf500625c

Reducing the reliance on nitrogen fertilizer for wheat production

A - Papers appearing in refereed journals

Hawkesford, M. J. 2014. Reducing the reliance on nitrogen fertilizer for wheat production. Journal of Cereal Science. 59, pp. 276-283. https://doi.org/10.1016/j.jcs.2013.12.001

The role of chitin signalling in defence against Zymoseptoria tritici in wheat

C2 - Non-edited contributions to conferences

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2014. The role of chitin signalling in defence against Zymoseptoria tritici in wheat. Abstracts Monogram Network Meeting, Reading,27-28 March 2014 .

Functional characterisation of members of the cytochrome B5 reductase gene family in the wheat-infecting fungus Zymoseptoria tritici

C2 - Non-edited contributions to conferences

Derbyshire, M., Courbot, M., Hammond-Kosack, K. E., Michaelson, L. V., Parker, J., Thacker, U., Li, N., Bailey, A. and Rudd, J. J. 2014. Functional characterisation of members of the cytochrome B5 reductase gene family in the wheat-infecting fungus Zymoseptoria tritici. Abstracts Meeting on Molecular Biology of Plant Pathogens, Reading, 26-27 March 2014 .

Mycosphaerella graminicola LysM effector-mediated stealth pathogenesis subverts recognition through both CERK1 and CEBiP homologues in wheat

A - Papers appearing in refereed journals

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2014. Mycosphaerella graminicola LysM effector-mediated stealth pathogenesis subverts recognition through both CERK1 and CEBiP homologues in wheat. Molecular Plant-Microbe Interactions - MPMI. 27 (3), pp. 236-243. https://doi.org/10.1094/MPMI-07-13-0201-R

Iron deprivation results in a rapid but not sustained increase of the expression of genes involved in iron metabolism and sulfate uptake in tomato (Solanum lycopersicum L.) seedlings

A - Papers appearing in refereed journals

Paolacci, A. R., Celletti, S., Catarcione, G., Hawkesford, M. J., Astolfi, S. and Ciaffi, M. 2014. Iron deprivation results in a rapid but not sustained increase of the expression of genes involved in iron metabolism and sulfate uptake in tomato (Solanum lycopersicum L.) seedlings. Journal of Integrative Plant Biology. 56 (1), pp. 88-100. https://doi.org/10.1111/jipb.12110

Genotypic variation in the uptake, partitioning and remobilisation of nitrogen during grain-filling in wheat

A - Papers appearing in refereed journals

Barraclough, P. B., Lopez-Bellido, R. and Hawkesford, M. J. 2014. Genotypic variation in the uptake, partitioning and remobilisation of nitrogen during grain-filling in wheat. Field Crops Research. 156, pp. 242-248. https://doi.org/10.1016/j.fcr.2013.10.004

Effects of nitrogen nutrition on the synthesis and deposition of the ω-gliadins of wheat

A - Papers appearing in refereed journals

Wan, Y., Gritsch, C. S., Hawkesford, M. J. and Shewry, P. R. 2014. Effects of nitrogen nutrition on the synthesis and deposition of the ω-gliadins of wheat. Annals of Botany. 113, pp. 607-615. https://doi.org/10.1093/aob/mct291

Copper toxicity in Chinese cabbage is not influenced by plant sulphur status, but affects sulphur metabolism- related gene expression and the suggested regulatory metabolites

A - Papers appearing in refereed journals

Shahbaz, M., Stuiver, C. E. E., Posthumus, F. S., Parmar, S., Hawkesford, M. J. and De Kok, L. J. 2014. Copper toxicity in Chinese cabbage is not influenced by plant sulphur status, but affects sulphur metabolism- related gene expression and the suggested regulatory metabolites. Plant Biology. 16 (1), pp. 68-78. https://doi.org/10.1111/plb.12019

New developments in identification and quantification of airborne inoculum

C2 - Non-edited contributions to conferences

West, J. S., Heard, S., Canning, G., Fraaije, B. A. and Hammond-Kosack, K. E. 2013. New developments in identification and quantification of airborne inoculum.

Utilising virus-induced gene silencing (VIGS) to dissect cereal plant-fungal interactions

C2 - Non-edited contributions to conferences

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2013. Utilising virus-induced gene silencing (VIGS) to dissect cereal plant-fungal interactions. Abstracts EMBO Workshop on Green Viruses, from Gene to Landscape, Hyeres-les-Palmiers, 7-11 September 2013 . pp. 79

BSMV-VOX: a virus mediated transient expression tool that enables functional characterisation of small heterologous proteins in planta

C2 - Non-edited contributions to conferences

Kanyuka, K., Ruiz, O., Rudd, J. J., Avrova, A. and Hammond-Kosack, K. E. 2013. BSMV-VOX: a virus mediated transient expression tool that enables functional characterisation of small heterologous proteins in planta. Abstracts BBSRC Crop Improvement Research Club 5th Dissemination Event, Edinburgh, 11-12 December 2013 .

Investigation of metabolic processes involved in the infection of wheat by Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Derbyshire, M., Bailey, A., Hammond-Kosack, K. E., Courbot, M. and Rudd, J. J. 2013. Investigation of metabolic processes involved in the infection of wheat by Mycosphaerella graminicola. Abstracts 5th Congress of European Microbiologists (FEMS), Leipzig, 21-25 July 2013 .

Identification and exploitation of effectors from barley fungal pathogen Rhynchosporium commune

C2 - Non-edited contributions to conferences

Avrova, A., Berepiki, A., Gamble, L., Griffe, L., Ruiz, O., Munsterkotter, M., Knogge, W., Newton, A., Birch, P., Hammond-Kosack, K. E. and Kanyuka, K. 2013. Identification and exploitation of effectors from barley fungal pathogen Rhynchosporium commune. Abstracts BBSRC Crop Improvement Research Club 5th Dissemination Event, Edinburgh, 11-12 December 2013 .

Sustainability of UK-grown wheat for breadmaking (HGCA Project Report No. 521)

D1 - Technical reports: non-confidential

Shewry, P. R., Wan, Y., Chope, G., Penson, S., Mosleth, E. F. and Hawkesford, M. J. 2013. Sustainability of UK-grown wheat for breadmaking (HGCA Project Report No. 521). Home Grown Cereals Authority (HGCA) Kenilworth.

Prospects of doubling global wheat yields

A - Papers appearing in refereed journals

Hawkesford, M. J., Araus, J-L., Park, R., Calderini, D., Miralles, D., Shen, T., Zhang, J. and Parry, M. A. J. 2013. Prospects of doubling global wheat yields. Food and Energy Security. 2, pp. 34-48. https://doi.org/10.1002/fes3.15

Plant functioning in a changing global and polluted environment

A - Papers appearing in refereed journals

De Kok, L. J. and Hawkesford, M. J. 2013. Plant functioning in a changing global and polluted environment. Environmental and Experimental Botany. 88, p. 1. https://doi.org/10.1016/j.envexpbot.2013.02.003

Modulation and manipulation of plant defences by Mycosphaerella graminicola during wheat infection

C2 - Non-edited contributions to conferences

Kanyuka, K., Lee, W-S., Hammond-Kosack, K. E. and Rudd, J. J. 2013. Modulation and manipulation of plant defences by Mycosphaerella graminicola during wheat infection. Abstracts 12th International Wheat Genetics Symposium (IWGS), Yokohama, 8-14 September 2013 .

Identification and exploitation of effectors from barley fungal pathogen Rhynchosporium commune

C2 - Non-edited contributions to conferences

Avrova, A., Gamble, L., Griffe, L., Ruiz, O., Munsterkotter, M., Knogge, W., Newton, A., Birch, P., Hammond-Kosack, K. E. and Kanyuka, K. 2013. Identification and exploitation of effectors from barley fungal pathogen Rhynchosporium commune. Abstracts 1st Annual Meeting COST Action FA 1208 Pathogen-informed Strategies for Sustainable Broad-Spectrum Crop Resistance, Birnam, 9-11 October 2013 .

Genus-specific CYP51C of Fusarium graminearum identified as a novel CYP51 rather than azole fungicide target sterol 14alpha-demethylases

C2 - Non-edited contributions to conferences

Fan, J., Urban, M., Parker, J. E., Brewer, H. C., Kelly, S. L., Hammond-Kosack, K. E., Fraaije, B. A., Liu, X. and Cools, H. J. 2013. Genus-specific CYP51C of Fusarium graminearum identified as a novel CYP51 rather than azole fungicide target sterol 14alpha-demethylases. Chinese Society for Plant Pathology.

Identification and characterisation of resistance to take-all fungus in wheat (HGCA Student Report No. 31)

D1 - Technical reports: non-confidential

Mcmillan, V. E. 2013. Identification and characterisation of resistance to take-all fungus in wheat (HGCA Student Report No. 31). Kenilworth Home Grown Cereals Authority (HGCA).

Utilising virus-induced gene silencing (VIGS) to dissect plant defence signalling and the underlying plant defence mechanisms in wheat and barley

C2 - Non-edited contributions to conferences

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2013. Utilising virus-induced gene silencing (VIGS) to dissect plant defence signalling and the underlying plant defence mechanisms in wheat and barley. Abstracts National Institutes of Bioscience Conference, Edinburgh, 18-19 June 2013 .

Genomic clustering and co-regulation of transcriptional networks in the pathogenic fungus Fusarium graminearum

A - Papers appearing in refereed journals

Lawler, K., Hammond-Kosack, K. E., Brazma, A. and Coulson, R. M. R. 2013. Genomic clustering and co-regulation of transcriptional networks in the pathogenic fungus Fusarium graminearum. BMC Systems Biology. 7, p. 52. https://doi.org/10.1186/1752-0509-7-52

BSMV-VOX: a virus mediated transient expression tool that enables the functional characterisation of small heterologous proteins in planta

C2 - Non-edited contributions to conferences

Kanyuka, K., Ruiz, O., Rudd, J. J., Avrova, A. and Hammond-Kosack, K. E. 2013. BSMV-VOX: a virus mediated transient expression tool that enables the functional characterisation of small heterologous proteins in planta. Abstracts National Institutes of Bioscience Conference, Edinburgh, 18-20 June 2013 .

Molecular genetics and genomic approaches to explore Fusarium infection of wheat floral tissue

B - Book chapters etc edited externally

Urban, M. and Hammond-Kosack, K. E. 2013. Molecular genetics and genomic approaches to explore Fusarium infection of wheat floral tissue. in: Brown, D. W. and Proctor, R. H. (ed.) Fusarium: genomics, molecular and cellular biology Caister Academic Press, Norwich, Norfolk. pp. 43-79

Identification of QTLs associated with seedling root traits and their correlation with plant height in wheat

A - Papers appearing in refereed journals

Bai, C., Liang, Y. and Hawkesford, M. J. 2013. Identification of QTLs associated with seedling root traits and their correlation with plant height in wheat. Journal of Experimental Botany. 64, pp. 1745-1753. https://doi.org/10.1093/jxb/ert041

Network-based data integration for selecting candidate virulence associated proteins in the cereal infecting fungus Fusarium graminearum

A - Papers appearing in refereed journals

Lysenko, A., Urban, M., Bennett, L., Tsoka, S., Janowska-Sejda, E., Rawlings, C. J., Hammond-Kosack, K. E. and Saqi, M. 2013. Network-based data integration for selecting candidate virulence associated proteins in the cereal infecting fungus Fusarium graminearum. PLOS ONE. 8, p. e67926. https://doi.org/10.1371/journal.pone.0067926

Using the phenotypic information in the PHI-base database to explore pathogen genomes, transcriptomes and proteomes

C2 - Non-edited contributions to conferences

Urban, M., Antoniw, J. F., Martins, N., Lysenko, A., Grzebyta, J., Janowska-Sedja, E., Saqi, M. and Hammond-Kosack, K. E. 2013. Using the phenotypic information in the PHI-base database to explore pathogen genomes, transcriptomes and proteomes. Abstracts 27th Fungal Genetics Conference, Asilomar, 12-17 March 2013 . pp. 177

Exploring the metabolome of cereal infecting fusaria

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Lowe, R. G. T., Canning, G., Urban, M., Beale, M. H. and Ward, J. L. 2013. Exploring the metabolome of cereal infecting fusaria. Abstracts 27th Fungal Genetics Conference, Asilomar, 12-17 March 2013 . pp. 21

Characterisation of stuA homologue in Fusarium culmorum

C2 - Non-edited contributions to conferences

Pasquali, M., Spanu, F., Balmas, V., Scherm, B., Hammond-Kosack, K. E., Hoffmann, L., Beyer, M. and Migheli, Q. 2013. Characterisation of stuA homologue in Fusarium culmorum. Abstracts 27th Fungal Genetics Conference, Asilomar, 12-17 March 2013 . pp. 185

FcStuA from Fusarium culmorum controls wheat foot and root rot in a toxin dispensable manner

A - Papers appearing in refereed journals

Pasquali, M., Spanu, F., Scherm, B., Balmas, V., Hoffmann, L., Hammond-Kosack, K. E., Beyer, M. and Migheli, Q. 2013. FcStuA from Fusarium culmorum controls wheat foot and root rot in a toxin dispensable manner. PLOS ONE. 8, p. e57429 (14pp). https://doi.org/10.1371/journal.pone.0057429

One fungus, one name: defining the genus Fusarium in a scientifically robust way that preserves longstanding use

A - Papers appearing in refereed journals

Geiser, D. M., Aoki, T., Bacon, C. W., Baker, S. E., Bhattacharyya, M. K., Brandt, M. E., Brown, D. W., Burgess, L. W., Chulze, S., Coleman, J. J., Correll, J. C., Covert, S. F., Crous, P. W., Cuomo, C. A., De Hoog, G. S., Di Pietro, A., Elmer, W. H., Epstein, L., Frandsen, R. J. N., Freeman, S., Gagkaeva, T., Glenn, A. E., Gordon, T. R., Gregory, N. F. and Hammond-Kosack, K. E. 2013. One fungus, one name: defining the genus Fusarium in a scientifically robust way that preserves longstanding use. Phytopathology. 103 (5), pp. 400-408. https://doi.org/10.1094/PHYTO-07-12-0150-LE

Characterization of the sterol 14alpha-demethylases of Fusarium graminearum identifies a novel genus-specific CYP51 function

A - Papers appearing in refereed journals

Fan, J., Urban, M., Parker, J. E., Brewer, H. C., Kelly, S. L., Hammond-Kosack, K. E., Fraaije, B. A., Liu, X. and Cools, H. J. 2013. Characterization of the sterol 14alpha-demethylases of Fusarium graminearum identifies a novel genus-specific CYP51 function. New Phytologist. 198 (3), pp. 821-835. https://doi.org/10.1111/nph.12193

Natural variation in grain composition of wheat and related cereals

A - Papers appearing in refereed journals

Shewry, P. R., Hawkesford, M. J., Piironen, V., Lampi, A-M., Gebruers, K., Boros, D., Andresson, A. A. M., Aman, P., Rakszegi, M., Bedo, Z. and Ward, J. L. 2013. Natural variation in grain composition of wheat and related cereals. Journal of Agricultural and Food Chemistry - JAFC. 61, pp. 8295-8303. https://doi.org/10.1021/jf3054092

Mineral composition analysis: measuring anion uptake and anion concentrations in plant tissues

B - Book chapters etc edited externally

Hawkesford, M. J., Parmar, S. and Buchner, P. H. 2013. Mineral composition analysis: measuring anion uptake and anion concentrations in plant tissues. in: Maathuis, F. J. M. (ed.) Plant mineral nutrients: methods and protocols Humana Press, New York. pp. 109-119

Exploitation of genomics in fungicide research: current status and future perspectives

A - Papers appearing in refereed journals

Cools, H. J. and Hammond-Kosack, K. E. 2013. Exploitation of genomics in fungicide research: current status and future perspectives. Molecular Plant Pathology. 14 (2), pp. 197-210. https://doi.org/10.1111/mpp.12001

Copper toxicity and sulfur metabolism in Chinese cabbage are affected by UV radiation

A - Papers appearing in refereed journals

Shahbaz, M., Parmar, S., Stuiver, C. E. E., Hawkesford, M. J. and De Kok, L. J. 2013. Copper toxicity and sulfur metabolism in Chinese cabbage are affected by UV radiation. Environmental and Experimental Botany. 88, pp. 60-70. https://doi.org/10.1016/j.envexpbot.2012.04.007

A novel family of γ-gliadin genes are highly regulated by nitrogen supply in developing wheat grain

A - Papers appearing in refereed journals

Wan, Y., Shewry, P. R. and Hawkesford, M. J. 2013. A novel family of γ-gliadin genes are highly regulated by nitrogen supply in developing wheat grain. Journal of Experimental Botany. 64 (1), pp. 161-168. https://doi.org/10.1093/jxb/ers318

Detection of multi-clustered genes and community structure for the plant pathogenic fungus Fusarium graminearum

B - Book chapters etc edited externally

Bennett, L., Lysenko, A., Papageorgiou, L. G., Urban, M., Hammond-Kosack, K. E., Rawlings, C. J., Saqi, M. and Tsoka, S. 2012. Detection of multi-clustered genes and community structure for the plant pathogenic fungus Fusarium graminearum. in: Gilbert, D. and Heiner, M. (ed.) Computational Methods in Systems Biology Springer-Verlag Berlin Heidelberg.

Identification and characterisation of resistance to the take-all fungus in wheat. PhD thesis, University of Exeter

F - Theses

Mcmillan, V. E. 2012. Identification and characterisation of resistance to the take-all fungus in wheat. PhD thesis, University of Exeter. F - Theses

Genomic approaches to analysing disease caused by plant pathogenic Mycosphaerella species

C2 - Non-edited contributions to conferences

Lucas, J. A., Amaral, A., Hammond-Kosack, K. E. and Rudd, J. J. 2012. Genomic approaches to analysing disease caused by plant pathogenic Mycosphaerella species. Abstracts 4th Brazilian Congress of Biotechnology, Guaruja, 28 October - 1 November 2012 . pp. 30

Improving nutrient use efficiency in crops

B - Book chapters etc edited externally

Hawkesford, M. J. 2012. Improving nutrient use efficiency in crops. in: eLS John Wiley & Sons Chichester, West Sussex.

Comparative spatiotemporal analysis of root aerenchyma formation processes in maize due to sulphate, nitrate or phosphate deprivation

A - Papers appearing in refereed journals

Siyiannis, V. F., Protonotarios, V. E., Zechmann, B., Chorianopoulou, S. N., Muller, M., Hawkesford, M. J. and Bouranis, D. L. 2012. Comparative spatiotemporal analysis of root aerenchyma formation processes in maize due to sulphate, nitrate or phosphate deprivation. Protoplasma. 249, pp. 671-686. https://doi.org/10.1007/s00709-011-0309-y

Functions of macronutrients

B - Book chapters etc edited externally

Hawkesford, M. J., Horst, W., Kichey, T., Lambers, H., Schjoerring, J., Skrumsager Moller, I. and White, P. 2012. Functions of macronutrients. in: Marschner, P. (ed.) Marschner's mineral nutrition of higher plants, 3rd ed Academic Press Amsterdam, Netherlands. pp. 135-189

Sulfate uptake and assimilation - whole plant regulation

B - Book chapters etc edited externally

Hawkesford, M. J. 2012. Sulfate uptake and assimilation - whole plant regulation. in: Hawkesford, M. J., Tabe, L., Schnug, E., Saito, K., Rennenberg, H., Norton, R. M., Mcmanus, M. T., Hoefgen, R., Tausz, M. and Dekok, L. J. (ed.) Sulfur metabolism in plants Springer, Dordrecht. pp. 11-24

Sulfur metabolism in plants

E - Books edited/written by staff member, alone/with others

De Kok, L. J., Tuasz, M., Hawkesford, M. J., Hoefgen, R., Mcmanus, M. T., Norton, R. M., Rennenberg, H., Saito, K., Schnug, E. and Tabe, L. 2012. Sulfur metabolism in plants. Springer, Dordrecht.

The diversity of nitrogen use efficiency for wheat varieties and the potential for crop improvement

G - Articles in popular magazines and other technical publications

Hawkesford, M. J. 2012. The diversity of nitrogen use efficiency for wheat varieties and the potential for crop improvement. Better Crops. 96 (3), pp. 10-12.

Isolation and characterisation of FcStuA in Fusarium culmorum, causal agent of foot crown rot

C2 - Non-edited contributions to conferences

Pasquali, M., Spanu, F., Balmas, V., Scherm, B., Hoffmann, L., Hammond-Kosack, K. E., Beyer, M. and Migheli, Q. 2012. Isolation and characterisation of FcStuA in Fusarium culmorum, causal agent of foot crown rot. Abstracts 11th European Conference on Fungal Genetics, Marburg, 30 March - 2 April 2012 . pp. 98

Shouldn't enantiomeric purity be included in the minimum information about a bioactive entity? Response from the MIABE group

G - Articles in popular magazines and other technical publications

Orchard, S., Al-Lazikani, B., Bryant, S., Clark, D., Calder, E., Dix, I., Engkvist, O., Forster, M., Gaulton, A., Gilson, M., Glen, R., Grigorov, M., Hammond-Kosack, K. E., Harland, L., Hopkins, A., Larminie, C., Lynch, N., Mann, R. K., Murray-Rust, P., Lo Piparo, E., Southan, C., Steinbeck, C., Wishart, D., Hermjakob, H., Overington, J. and Thornton, J. 2012. Shouldn't enantiomeric purity be included in the minimum information about a bioactive entity? Response from the MIABE group. Nature Reviews Drug Discovery. 10, p. 661. https://doi.org/10.1038/nrd3503-c2

Estudos avancados para deteccao de genes diferencialmente expressos em trigo infectado por Fusarium graminearum

C2 - Non-edited contributions to conferences

Martins, N. F. and Hammond-Kosack, K. E. 2012. Estudos avancados para deteccao de genes diferencialmente expressos em trigo infectado por Fusarium graminearum. Abstracts 1st Meeting EMBRAPA Researchers and Engineers in Europe, Montpellier, 18 October 2012 .

Barley stripe mosaic virus- mediated tools for investigating gene function in cereal plants and their pathogens: virus-induced gene silencing, host-mediated gene silencing and virus-mediated overexpression of heterologous protein

A - Papers appearing in refereed journals

Lee, W-S., Hammond-Kosack, K. E. and Kanyuka, K. 2012. Barley stripe mosaic virus- mediated tools for investigating gene function in cereal plants and their pathogens: virus-induced gene silencing, host-mediated gene silencing and virus-mediated overexpression of heterologous protein. Plant Physiology. 160, pp. 582-590. https://doi.org/10.1104/pp.112.203489

Phytopath - A new bioinformatics resource for plant pathogens

C2 - Non-edited contributions to conferences

Pedro, H., Grzebyta, J., Urban, M., Saqi, M., Kerhornou, A., Maheswari, U., Kersey, P. and Hammond-Kosack, K. E. 2012. Phytopath - A new bioinformatics resource for plant pathogens. Abstracts 11th European Conference on Fungal Genetics, Marburg, 30 March - 2 April 2012 . pp. 138

Defining the predicted protein secretome of the fungal wheat leaf pathogen Mycosphaerella graminicola

A - Papers appearing in refereed journals

Do Amaral, A. M., Antoniw, J. F., Rudd, J. J. and Hammond-Kosack, K. E. 2012. Defining the predicted protein secretome of the fungal wheat leaf pathogen Mycosphaerella graminicola. PLOS ONE. 7, p. e49904 (19 pp). https://doi.org/10.1371/journal.pone.0049904

A refinement of the predicted secretome for the wheat leaf pathogen Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Do Amaral, A. M., Antoniw, J. F., Rudd, J. J. and Hammond-Kosack, K. E. 2012. A refinement of the predicted secretome for the wheat leaf pathogen Mycosphaerella graminicola. Abstracts IS-MPMI 2012 15th International Congress, Kyoto, 29 July - 2 August 2012 . pp. 104

Virus-induced gene silencing as a tool to study wheat gene function in the interaction with the pathogenic fungus Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Lee, W-S., Marshall, R., Hammond-Kosack, K. E., Rudd, J. J. and Kanyuka, K. 2012. Virus-induced gene silencing as a tool to study wheat gene function in the interaction with the pathogenic fungus Mycosphaerella graminicola. Abstracts Plant Biology Congress, Freiburg, 29 July-3 August 2012 . pp. 709

Phytopath: new pathogen resource launched

G - Articles in popular magazines and other technical publications

Kersey, P., Pedro, H., Maheswari, U., Hammond-Kosack, K. E., Urban, M., Saqi, M. and Grzebyta, J. 2012. Phytopath: new pathogen resource launched. GARNish Newsletter. 17, p. 8.

Identification of differentially senescing mutants of wheat and impacts on yield, biomass and nitrogen partitioning

A - Papers appearing in refereed journals

Derkx, A. P., Orford, S., Griffiths, S., Foulkes, M. J. and Hawkesford, M. J. 2012. Identification of differentially senescing mutants of wheat and impacts on yield, biomass and nitrogen partitioning. Journal of Integrative Plant Biology. 54 (8), pp. 555-566. https://doi.org/10.1111/j.1744-7909.2012.01144.x

An integrated approach to crop genetic improvement

A - Papers appearing in refereed journals

Parry, M. A. J. and Hawkesford, M. J. 2012. An integrated approach to crop genetic improvement. Journal of Integrative Plant Biology. 54 (4), pp. 250-259. https://doi.org/10.1111/j.1744-7909.2012.01109.x

The role of chitin signalling in the wheat - M. graminicola interaction

C2 - Non-edited contributions to conferences

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2012. The role of chitin signalling in the wheat - M. graminicola interaction. Abstracts Rank Prize Funds Mini-Symposium on New Horizons in Plant-Pathogen Interactions, Grasmere, 30 April-3 May 2012 .

Diversity of nitrogen use efficiency, yield and quality in wheat germplasm

C2 - Non-edited contributions to conferences

Hawkesford, M. J. 2012. Diversity of nitrogen use efficiency, yield and quality in wheat germplasm. Lang, L. and Bedo, Z. (ed.) Plant Breeding for Future Generations: Proceedings 19th EUCARPIA General Congress, Budapest, 21-24 May 2012 . Agricultural Institute, Martonvasar. pp. 422

Shortcomings in wheat yield predictions

A - Papers appearing in refereed journals

Semenov, M. A., Mitchell, R. A. C., Whitmore, A. P., Hawkesford, M. J., Parry, M. A. J. and Shewry, P. R. 2012. Shortcomings in wheat yield predictions. Nature Climate Change. 2, pp. 380-382. https://doi.org/10.1038/nclimate1511

Chromosomal evolutionary processes in filamentous fungi: macrosynteny and mesosynteny in basidiomycetes and concatenated ascomycete genomes

C2 - Non-edited contributions to conferences

Oliver, R. P., Williams, A., Antoniw, J. F. and Hammond-Kosack, K. E. 2012. Chromosomal evolutionary processes in filamentous fungi: macrosynteny and mesosynteny in basidiomycetes and concatenated ascomycete genomes. Abstracts Dothideomycetes Satellite Meeting, Marburg, 3 April 2012 .

The role of chitin signalling in the wheat - M. graminicola interaction

C2 - Non-edited contributions to conferences

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2012. The role of chitin signalling in the wheat - M. graminicola interaction. Abstracts Molecular Biology of Plant Pathogens, Reading, 16-17 April 2012 .

Exploring the early symptomless phase of Fusarium graminearum infection of wheat ears

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Brown, N. A., Urban, M. and Antoniw, J. F. 2012. Exploring the early symptomless phase of Fusarium graminearum infection of wheat ears. Abstracts 11th European Conference on Fungal Genetics, Marburg, 30 March - 2 April 2012 . pp. 74

Functional characterisation of Cytochrome P450 genes from the wheat leaf pathogen Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Derbyshire, M., Bailey, A., Hammond-Kosack, K. E., Courbot, M. and Rudd, J. J. 2012. Functional characterisation of Cytochrome P450 genes from the wheat leaf pathogen Mycosphaerella graminicola. Abstracts 11th European Conference on Fungal Genetics, Marburg, 30 March - 2 April 2012 . pp. 233

The top 10 fungal pathogens in molecular plant pathology

A - Papers appearing in refereed journals

Dean, R., Van Kan, J. A. L., Pretorius, Z. A., Hammond-Kosack, K. E., Di Pietro, A., Spanu, P. D., Rudd, J. J., Dickman, M., Kahmann, R., Ellis, J. and Foster, G. D. 2012. The top 10 fungal pathogens in molecular plant pathology. Molecular Plant Pathology. 13 (4), pp. 414-430. https://doi.org/10.1111/j.1364-3703.2011.00783.x

The velvet gene, FgVe1, affects fungal development and positively regulates trichothecene biosynthesis and pathogenicity in Fusarium graminearum

A - Papers appearing in refereed journals

Merhej, J., Urban, M., Dufresne, M., Hammond-Kosack, K. E., Richard-Forget, F. and Barreau, C. 2012. The velvet gene, FgVe1, affects fungal development and positively regulates trichothecene biosynthesis and pathogenicity in Fusarium graminearum. Molecular Plant Pathology. 13 (4), pp. 363-374. https://doi.org/10.1111/j.1364-3703.2011.00755.x

The predicted secretome of the plant pathogenic fungus Fusarium graminearum: a refined comparative analysis

A - Papers appearing in refereed journals

Brown, N. A., Antoniw, J. F. and Hammond-Kosack, K. E. 2012. The predicted secretome of the plant pathogenic fungus Fusarium graminearum: a refined comparative analysis. PLOS ONE. 7, p. e33731 (14pp). https://doi.org/10.1371/journal.pone.0033731

Localisation of iron in wheat grain using high resolution secondary ion mass spectrometry

A - Papers appearing in refereed journals

Moore, K. L., Zhao, F-J., Gritsch, C. S., Tosi, P., Hawkesford, M. J., McGrath, S. P., Shewry, P. R. and Grovenor, C. R. M. 2012. Localisation of iron in wheat grain using high resolution secondary ion mass spectrometry. Journal of Cereal Science. 55 (2), pp. 183-187. https://doi.org/10.1016/j.jcs.2011.11.005

Confidential report to Syngenta, January 2012

D1 - Technical reports: non-confidential

Mcmillan, V. E., Hammond-Kosack, K. E. and Gutteridge, R. J. 2012. Confidential report to Syngenta, January 2012.

Evolutionary relationships and functional diversity of plant sulfate transporters

A - Papers appearing in refereed journals

Takahashi, H., Buchner, P. H., Yoshimoto, N., Hawkesford, M. J. and Shiu, S-H. 2012. Evolutionary relationships and functional diversity of plant sulfate transporters. Frontiers in Plant Science. 2, p. 119 (9pp). https://doi.org/10.3389/fpls.2011.00119

The induction of mycotoxins by trichothecene producing Fusarium species

B - Book chapters etc edited externally

Lowe, R., Jubault, M., Canning, G., Urban, M. and Hammond-Kosack, K. E. 2012. The induction of mycotoxins by trichothecene producing Fusarium species. in: Thomma, B. P. H. J. and Bolton, M. D. (ed.) Plant fungal pathogens: methods and protocols (Methods in Molecular Biology, Vol 835) Springer, Berlin. pp. 439-455

Nitrogen use efficiency and long and longer term experiments at Rothamsted

C2 - Non-edited contributions to conferences

Hawkesford, M. J. and Santillano-Cazares, J. 2011. Nitrogen use efficiency and long and longer term experiments at Rothamsted. Abstracts XIV Congreso Internacional en Ciencias Agricolas, Mexicali, 27-28 October 2011 . pp. 2-7

Virus-induced gene silencing system for functional genomics studies in wheat and related cereals

C2 - Non-edited contributions to conferences

Lee, W-S., Hammond-Kosack, K. E. and Kanyuka, K. 2011. Virus-induced gene silencing system for functional genomics studies in wheat and related cereals. Abstracts UK Monogram Network Workshop, Sutton Bonington, 11-13 April 2011 . pp. 14

WGIN Stakeholder's Newsletter [November 2011]

G - Articles in popular magazines and other technical publications

Hammond-Kosack, K. E. 2011. WGIN Stakeholder's Newsletter [November 2011]. WGIN Stakeholders' Newsletter. November.

Reducing take-all inoculum build-up during a first wheat crop

C2 - Non-edited contributions to conferences

Mcmillan, V. E., Hammond-Kosack, K. E., Kanyuka, K. and Gutteridge, R. 2011. Reducing take-all inoculum build-up during a first wheat crop. APS-IPPC Joint Meeting, Tampa, Florida, USA, 30 July -3 August 2011. American Phytopathological Society (APS).

A comparison of sulfate and selenium accumulation in relation to the expression of sulfate transporter genes in Astragalus species

A - Papers appearing in refereed journals

Cabannes, E., Buchner, P. H., Broadley, M. R. and Hawkesford, M. J. 2011. A comparison of sulfate and selenium accumulation in relation to the expression of sulfate transporter genes in Astragalus species. Plant Physiology. 157, pp. 2227-2239. https://doi.org/10.1104/pp.111.183897

OmniMapFree a unified tool to visualise and explore sequenced genomes

A - Papers appearing in refereed journals

Antoniw, J. F., Beacham, A. M., Baldwin, T. K., Urban, M., Rudd, J. J. and Hammond-Kosack, K. E. 2011. OmniMapFree a unified tool to visualise and explore sequenced genomes. BMC Bioinformatics. 12, p. 447 (14pp). https://doi.org/10.1186/1471-2105-12-447

Characterisation of the Fusarium graminearum-wheat floral interaction

A - Papers appearing in refereed journals

Brown, N. A., Bass, C. G., Baldwin, T. K., Chen, Huaigu, Massot, F., Carion, P. W. C., Urban, M., Van De Meene, A. M. L. and Hammond-Kosack, K. E. 2011. Characterisation of the Fusarium graminearum-wheat floral interaction. Journal of Pathogens. 2011, p. 626345. https://doi.org/10.4061/2011/626345

Minimum information about a bioactive entity (MIABE)

A - Papers appearing in refereed journals

Orchard, S., Al-Lazikani, B., Bryant, S., Clark, D., Calder, E., Dix, I., Engkvist, O., Forster, M., Gaulton, A., Gilson, M., Glen, R., Grigorov, M., Hammond-Kosack, K. E., Harland, L., Hopkins, A., Larminie, C., Lynch, N., Mann, R. K., Murray-Rust, P., Lo Piparo, E., Southan, C., Steinbeck, C., Wishart, D., Hermjakob, H., Overington, J. and Thornton, J. 2011. Minimum information about a bioactive entity (MIABE). Nature Reviews Drug Discovery. 10, pp. 661-669. https://doi.org/10.1038/nrd3503

An exceptionally high nucleotide and haplotype diversity and a signature of positive selection for the eIF4E resistance gene in barley are revealed by allele mining and phylogenetic analyses of natural populations

A - Papers appearing in refereed journals

Hofinger, B. J., Russell, J. R., Bass, C. G., Baldwin, T., Dos Reis, M., Hedley, P. E., Li, Y., Macaulay, M., Waugh, R., Hammond-Kosack, K. E. and Kanyuka, K. 2011. An exceptionally high nucleotide and haplotype diversity and a signature of positive selection for the eIF4E resistance gene in barley are revealed by allele mining and phylogenetic analyses of natural populations. Molecular Ecology. 20 (17), pp. 3653-3668. https://doi.org/10.1111/j.1365-294X.2011.05201.x

An overview of nutrient use efficiency and strategies for crop improvement

B - Book chapters etc edited externally

Hawkesford, M. J. 2011. An overview of nutrient use efficiency and strategies for crop improvement. in: Hawkesford, M. J. and Barraclough, P. B. (ed.) Molecular and physiological basis of nutrient use in crops John Wiley & Sons Chichester, West Sussex. pp. 5-19

Molecular and physiological basis of nutrient use efficiency in crops

E - Books edited/written by staff member, alone/with others

Hawkesford, M. J. and Barraclough, P. B. 2011. Molecular and physiological basis of nutrient use efficiency in crops. John Wiley & Sons Chichester, West Sussex.

Aberrant protein N- glycosylation impacts upon infection-related growth transitions of the haploid plant-pathogenic fungus Mycosphaerella graminicola

A - Papers appearing in refereed journals

Motteram, J., Lovegrove, A., Pirie, E. J., Marsh, J., Devonshire, J., Van De Meene, A., Hammond-Kosack, K. E. and Rudd, J. J. 2011. Aberrant protein N- glycosylation impacts upon infection-related growth transitions of the haploid plant-pathogenic fungus Mycosphaerella graminicola. Molecular Microbiology. 81 (2), pp. 415-433. https://doi.org/10.1111/j.1365-2958.2011.07701.x

Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity and stealth pathogenesis

A - Papers appearing in refereed journals

Goodwin, S. B., Ben M'barek, S., Dhillon, B., Wittenberg, A. H. J., Crane, C. F., Hane, J. K., Foster, A. J., Van Der Lee, T. A. J., Grimwood, J., Aerts, A., Antoniw, J. F., Bailey, A., Bluhm, B., Bowler, J., Bristow, J., Van Der Burgt, A., Canto-Canche, B., Churchill, A. C. L., Conde-Ferraez, L., Cools, H. J., Coutinho, P. M., Csukai, M., Dehal, P., De Wit, P., Donzelli, B., Van De Geest, H. C., Van Ham, R. C. H. J., Hammond-Kosack, K. E. and Rudd, J. J. 2011. Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity and stealth pathogenesis. PLOS Genetics. 7, p. e1002070 (17pp). https://doi.org/10.1371/journal.pgen.1002070

High-resolution secondary ion mass spectrometry reveals the contrasting subcellular distribution of arsenic and silicon in rice roots

A - Papers appearing in refereed journals

Moore, K. L., Schroder, M., Wu, Z., Martin, B. G. H., Hawes, C. R., McGrath, S. P., Hawkesford, M. J., Ma, J. F., Zhao, F-J. and Grovenor, C. R. M. 2011. High-resolution secondary ion mass spectrometry reveals the contrasting subcellular distribution of arsenic and silicon in rice roots. Plant Physiology. 156, pp. 913-924. https://doi.org/10.1104/pp.111.173088

Analysis of two in planta expressed LysM effector homologs from the fungus Mycosphaerella graminicola reveals novel functional properties and varying contributions to virulence on wheat

A - Papers appearing in refereed journals

Marshall, R., Kombrink, A., Motteram, J., Loza-Reyes, E., Lucas, J. A., Hammond-Kosack, K. E., Thomma, B. P. H. J. and Rudd, J. J. 2011. Analysis of two in planta expressed LysM effector homologs from the fungus Mycosphaerella graminicola reveals novel functional properties and varying contributions to virulence on wheat. Plant Physiology. 156, pp. 756-769. https://doi.org/10.1104/pp.111.176347

Sulfate transport

B - Book chapters etc edited externally

Hawkesford, M. J. 2011. Sulfate transport. in: Peer, W., Schulz, B. and Murphy, A. S. (ed.) The plant plasma membrane Springer, Berlin. pp. 291-301

Infection of the wheat ear by the fungus Fusarium culmorum

C2 - Non-edited contributions to conferences

Van De Meene, A., Urban, M., Brown, N. A. and Hammond-Kosack, K. E. 2011. Infection of the wheat ear by the fungus Fusarium culmorum. Abstracts Botanical Microscopy Conference, Wageningen, 16-21 April 2011 .

A new approach to reduce the risk of Take-all disease

G - Articles in popular magazines and other technical publications

Mcmillan, V. E., Hammond-Kosack, K. E., Kanyuka, K. and Gutteridge, R. J. 2011. A new approach to reduce the risk of Take-all disease. RRA Newsletter. April, pp. 1-2.

Evidence that wheat cultivars differ in their ability to build up inoculum of the take-all fungus, Gaeumannomyces graminis var. tritici, under a first wheat crop

A - Papers appearing in refereed journals

Mcmillan, V. E., Hammond-Kosack, K. E. and Gutteridge, R. J. 2011. Evidence that wheat cultivars differ in their ability to build up inoculum of the take-all fungus, Gaeumannomyces graminis var. tritici, under a first wheat crop. Plant Pathology. 60 (2), pp. 200-206. https://doi.org/10.1111/j.1365-3059.2010.02375.x

The unseen threat of symptomless Fusarium wheat ear infection

C1 - Edited contributions to conferences/learned societies

Brown, N. A., Bass, C. G., Urban, M., Van De Meene, A. and Hammond-Kosack, K. E. 2011. The unseen threat of symptomless Fusarium wheat ear infection. Crop protection in Southern Britain. Aspects of Applied Biology 106 . pp. 143-149

Inactivation of plant infecting fungal and viral pathogens to achieve biological containment in drainage water using UV treatment

A - Papers appearing in refereed journals

Urban, M., Motteram, J., Jing, H-C., Powers, S. J., Townsend, J. A., Devonshire, J., Pearman, I., Kanyuka, K., Franklin, J. F. and Hammond-Kosack, K. E. 2011. Inactivation of plant infecting fungal and viral pathogens to achieve biological containment in drainage water using UV treatment. Journal of Applied Microbiology. 110 (3), pp. 675-687. https://doi.org/10.1111/j.1365-2672.2010.04917.x

The complex interactions between host immunity and non-biotrophic fungal pathogens of wheat leaves

A - Papers appearing in refereed journals

Deller, S., Hammond-Kosack, K. E. and Rudd, J. J. 2011. The complex interactions between host immunity and non-biotrophic fungal pathogens of wheat leaves. Journal of Plant Physiology. 168, pp. 63-71. https://doi.org/10.1016/j.jplph.2010.05.024

Transcriptional profiling approaches for studying nitrogen use efficiency

B - Book chapters etc edited externally

Hawkesford, M. J. and Howarth, J. R. 2011. Transcriptional profiling approaches for studying nitrogen use efficiency. in: Foyer, C. H. and Zhang, H. (ed.) Nitrogen metabolism in plants in the post-genomic era (Annual Plant Reviews Vol. 42) Blackwell Publishing Oxford. pp. 41-62

Food security: increasing yield and improving resource use efficiency

A - Papers appearing in refereed journals

Parry, M. A. and Hawkesford, M. J. 2010. Food security: increasing yield and improving resource use efficiency. The Proceedings of the Nutrition Society. 69 (4), pp. 592-600. https://doi.org/10.1017/S0029665110003836

Identification and characterization of novel natural alleles of eIF4E in barley providing broad-spectrum resistance to bymoviruses

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C., Baldwin, T., Jing, H-C., Beaudoin, F., Hammond-Kosack, K. E. and Kanyuka, K. 2010. Identification and characterization of novel natural alleles of eIF4E in barley providing broad-spectrum resistance to bymoviruses. Antoun, H., Trepanier, M., Prevost, D., Brisson, L. and Avis, T. (ed.) Biology of plant-microbe interactions, vol. 7 . International Society for Molecular Plant-Microbe Interactions, St. Paul. pp. Paper 71

The unseen threat to UK wheat production from Fusarium ear blight

C2 - Non-edited contributions to conferences

Brown, N. A., Bass, C. G., Urban, M., Van De Meene, A. and Hammond-Kosack, K. E. 2010. The unseen threat to UK wheat production from Fusarium ear blight. Abstracts CropWorld, London, 1-3 November 2010 .

Be more specific! Using laser capture micro-dissection to investigate Fusarium ear blight

C2 - Non-edited contributions to conferences

Brown, N. A., Urban, M., Van De Meene, A. and Hammond-Kosack, K. E. 2010. Be more specific! Using laser capture micro-dissection to investigate Fusarium ear blight. Abstracts 9th International Mycological Congress: the Biology of Fungi, Edinburgh, 1-6 August 2010 .

A combined 1H nuclear magnetic resonance and electrospray ionization-mass spectrometry analysis to understand the basal metabolism of plant-pathogenic Fusarium spp

A - Papers appearing in refereed journals

Lowe, R. G. T., Allwood, J. W., Galster, A. M., Urban, M., Daudi, A., Canning, G., Ward, J. L., Beale, M. H. and Hammond-Kosack, K. E. 2010. A combined 1H nuclear magnetic resonance and electrospray ionization-mass spectrometry analysis to understand the basal metabolism of plant-pathogenic Fusarium spp. Molecular Plant-Microbe Interactions - MPMI. 23 (12), pp. 1605-1618. https://doi.org/10.1094/MPMI-04-10-0092

The Fusaria

G - Articles in popular magazines and other technical publications

Hammond-Kosack, K. E. 2010. The Fusaria.

The infection biology of Fusarium graminearum: defining the pathways of spikelet to spikelet colonisation in wheat ears

A - Papers appearing in refereed journals

Brown, N. A., Urban, M., Van De Meene, A. M. L. and Hammond-Kosack, K. E. 2010. The infection biology of Fusarium graminearum: defining the pathways of spikelet to spikelet colonisation in wheat ears. Fungal Biology. 114 (7), pp. 555-571. https://doi.org/10.1016/j.funbio.2010.04.006

A partial chromosomal deletion caused by random plasmid integration resulted in a reduced virulence phenotype in Fusarium graminearum

A - Papers appearing in refereed journals

Baldwin, T. K., Gaffoor, I., Antoniw, J. F., Andries, C., Guenther, J., Urban, M., Hallen-Adams, H. E., Pitkin, J., Hammond-Kosack, K. E. and Trail, F. 2010. A partial chromosomal deletion caused by random plasmid integration resulted in a reduced virulence phenotype in Fusarium graminearum. Molecular Plant-Microbe Interactions - MPMI. 23 (8), pp. 1083-1096. https://doi.org/10.1094/MPMI-23-8-1083

Genetic approaches to reduce greenhouse gas emissions: increasing carbon capture and decreasing environmental impact

B - Book chapters etc edited externally

Parry, M. A. J. and Hawkesford, M. J. 2010. Genetic approaches to reduce greenhouse gas emissions: increasing carbon capture and decreasing environmental impact. in: Reynolds, M. P. (ed.) Climate change and crop production CABI International, Wallingford, Oxon (CABI). pp. 139-150

Impacts of sulphur nutrition on selenium and molybdenum concentrations in wheat grain

A - Papers appearing in refereed journals

Stroud, J. L., Zhao, F-J., Buchner, P. H., Shinmachi, F., McGrath, S. P., Abecassis, J., Hawkesford, M. J. and Shewry, P. R. 2010. Impacts of sulphur nutrition on selenium and molybdenum concentrations in wheat grain. Journal of Cereal Science. 52, pp. 111-113. https://doi.org/10.1016/j.jcs.2010.03.011

Influence of sulfur deficiency on the expression of specific sulfate transporters and the distribution of sulfur, selenium and molybdenum in wheat

A - Papers appearing in refereed journals

Shinmachi, F., Buchner, P. H., Stroud, J. L., Parmar, S., Zhao, F-J., McGrath, S. P. and Hawkesford, M. J. 2010. Influence of sulfur deficiency on the expression of specific sulfate transporters and the distribution of sulfur, selenium and molybdenum in wheat. Plant Physiology. 153 (1), pp. 327-336. https://doi.org/10.1104/pp.110.153759

The identification of a virulence factor-enriched micro-region in the Fusarium graminearum genome

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Antoniw, J. F., Freeman, A., Urban, M., Welham, S. J. and Beacham, A. 2010. The identification of a virulence factor-enriched micro-region in the Fusarium graminearum genome. Abstracts Fusarium Workshop, Amsterdam, 28-29 March 2010 .

Nitrogen efficiency of wheat: genotypic and environmental variation and prospects for improvement

A - Papers appearing in refereed journals

Barraclough, P. B., Howarth, J. R., Jones, J., Lopez-Bellido, R., Parmar, S., Shepherd, C. E. and Hawkesford, M. J. 2010. Nitrogen efficiency of wheat: genotypic and environmental variation and prospects for improvement. European Journal of Agronomy. 33, pp. 1-11. https://doi.org/10.1016/j.eja.2010.01.005

A role for topoisomerase I in Fusarium graminearum and F. culmorum pathogenesis and sporulation

A - Papers appearing in refereed journals

Baldwin, T. K., Urban, M., Brown, N. A. and Hammond-Kosack, K. E. 2010. A role for topoisomerase I in Fusarium graminearum and F. culmorum pathogenesis and sporulation. Molecular Plant-Microbe Interactions - MPMI. 23 (5), pp. 566-577. https://doi.org/10.1094/MPMI-23-5-0566

Copper exposure interferes with the regulation of the uptake, distribution and metabolism of sulfate in Chinese cabbage

A - Papers appearing in refereed journals

Shahbaz, M., Tseng, M. H., Stuiver, C. E. E., Koralewska, A., Posthumus, F. S., Venema, J. H., Parmar, S., Schat, H., Hawkesford, M. J. and De Kok, L. J. 2010. Copper exposure interferes with the regulation of the uptake, distribution and metabolism of sulfate in Chinese cabbage. Journal of Plant Physiology. 167, pp. 438-446. https://doi.org/10.1016/j.jplph.2009.10.016

Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium

A - Papers appearing in refereed journals

Ma, L-J., Van Der Does, H. C., Borkovich, K. A., Coleman, J. J., Daboussi, M-J., Di Pietro, A., Dufresne, M., Freitag, M., Grabherr, M., Henrissat, B., Houterman, P. M., Kang, S., Shim, W-B., Woloshuk, C., Xie, X., Xu, J-R., Antoniw, J. F., Baker, S. E., Bluhm, B. H., Breakspear, A., Brown, D. W., Butchko, R. A. E., Chapman, S., Coulson, R., Coutinho, P., Danchin, E. G. J., Diener, A., Gale, L. R. and Hammond-Kosack, K. E. 2010. Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. Nature. 464, pp. 367-373. https://doi.org/10.1038/nature08850

The sulfate transporter family in wheat: tissue-specific gene expression in relation to nutrition

A - Papers appearing in refereed journals

Buchner, P. H., Parmar, S., Kriegel, A., Carpentier, M. and Hawkesford, M. J. 2010. The sulfate transporter family in wheat: tissue-specific gene expression in relation to nutrition. Molecular Plant. 3, pp. 374-389. https://doi.org/10.1093/mp/ssp119

NanoSIMS analysis of arsenic and selenium in cereal grain

A - Papers appearing in refereed journals

Moore, K. L., Schroder, M., Lombi, E., Zhao, F-J., McGrath, S. P., Hawkesford, M. J., Shewry, P. R. and Grovenor, C. R. M. 2010. NanoSIMS analysis of arsenic and selenium in cereal grain. New Phytologist. 185 (2), pp. 434-445. https://doi.org/10.1111/j.1469-8137.2009.03071.x

Effects of crop nutrition on wheat grain composition and end use quality

A - Papers appearing in refereed journals

Godfrey, D., Hawkesford, M. J., Powers, S. J., Millar, S. and Shewry, P. R. 2010. Effects of crop nutrition on wheat grain composition and end use quality. Journal of Agricultural and Food Chemistry - JAFC. 58, pp. 3012-3021. https://doi.org/10.1021/jf9040645

Identification and characterisation of Mycosphaerella graminicola secreted or surface-associated proteins with variable intragenic coding repeats

A - Papers appearing in refereed journals

Rudd, J. J., Antoniw, J. F., Marshall, R., Motteram, J., Fraaije, B. A. and Hammond-Kosack, K. E. 2010. Identification and characterisation of Mycosphaerella graminicola secreted or surface-associated proteins with variable intragenic coding repeats. Fungal Genetics and Biology. 47, pp. 19-32. https://doi.org/10.1016/j.fgb.2009.10.009

Expression and activity of sulfate transporters and APS reductase in curly kale in response to sulfate deprivation and re-supply

A - Papers appearing in refereed journals

Koralewska, A., Buchner, P. H., Stuiver, C. E. E., Posthumus, F. S., Kopriva, S., Hawkesford, M. J. and De Kok, L. J. 2009. Expression and activity of sulfate transporters and APS reductase in curly kale in response to sulfate deprivation and re-supply. Journal of Plant Physiology. 166 (2), pp. 168-179. https://doi.org/10.1016/j.jplph.2008.03.005

Pest wars - press paper

C2 - Non-edited contributions to conferences

Lucas, J. A., Field, L. M., Cools, H. J. and Hammond-Kosack, K. E. 2009. Pest wars - press paper. Pest Wars: British Science Festival, Guildford, 8 September 2009 .

Functional evaluation of plant defence signalling against Fusarium graminearum and F. culmorum in Arabidopsis floral tissue

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Freeman, A., Desmouceaux, N., Urban, M. and Cuzick, A. 2009. Functional evaluation of plant defence signalling against Fusarium graminearum and F. culmorum in Arabidopsis floral tissue. Abstracts 14th International Congress on Molecular Plant-Microbe Interactions, Quebec, 19-23 July 2009 .

Molecular and genetic studies on Fusarium Ear Blight disease of wheat

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Kanyuka, K., Brown, N. A., Beacham, A. M., Cuzick, A., Antoniw, J. F. and Urban, M. 2009. Molecular and genetic studies on Fusarium Ear Blight disease of wheat. Abstracts 2009 National Fusarium Head Blight Forum, Orlando, 7-9 December 2009 .

Exploiting natural genetic diversity of barley germplasm to identify superior alleles of eIF4E conferring broad-spectrum virus resistance

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C., Baldwin, T., Beaudoin, F., Hammond-Kosack, K. E. and Kanyuka, K. 2009. Exploiting natural genetic diversity of barley germplasm to identify superior alleles of eIF4E conferring broad-spectrum virus resistance. Abstracts Rank Prize Funds Mini-Symposium on Domestication of Cereals and Exploitation of Genetic Diversity in Improvement, Grasmere, 21-24 September 2009 .

A new rapid and relatively inexpensive method for mining in plant germplasm collections for novel alleles of agronomically important genes: a case study in barley

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C., Baldwin, T., Jing, H-C., Beaudoin, F., Hammond-Kosack, K. E. and Kanyuka, K. 2009. A new rapid and relatively inexpensive method for mining in plant germplasm collections for novel alleles of agronomically important genes: a case study in barley. Abstracts 19th ITMI/3rd COST Tritigen Joint Workshop, Clermont-Ferrand, 31 August-4 September 2009 . pp. 34

Identification and characterization of novel natural alleles of eIF4E in barley providing broad-spectrum resistance to Bymoviruses

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C., Baldwin, T., Jing, H-C., Beaudoin, F., Hammond-Kosack, K. E. and Kanyuka, K. 2009. Identification and characterization of novel natural alleles of eIF4E in barley providing broad-spectrum resistance to Bymoviruses. Abstracts 14th International Congress on Molecular Plant-Microbe Interactions, Quebec, 19-23 July 2009 . pp. 18

Exploiting the genetic diversity of natural barley germplasm for the discovery of novel eIF4E alleles conferring broad spectrum resistance to bymoviruses

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C., Baldwin, T., Beaudoin, F., Hammond-Kosack, K. E. and Kanyuka, K. 2009. Exploiting the genetic diversity of natural barley germplasm for the discovery of novel eIF4E alleles conferring broad spectrum resistance to bymoviruses. Abstracts International Conference on Advances in Plant Virology, Harrogate, 1-3 April 2009 .

Construction and establishment of a containment level 3 plant growth facility at Rothamsted Research

D1 - Technical reports: non-confidential

Hammond-Kosack, K. E., Urban, M., Franklin, J. F. and Taberer, R. 2009. Construction and establishment of a containment level 3 plant growth facility at Rothamsted Research.

Identifying traits to improve the nitrogen economy of wheat: recent advances and future prospects

A - Papers appearing in refereed journals

Foulkes, M. J., Hawkesford, M. J., Barraclough, P. B., Holdsworth, M. J., Kerr, S., Kightley, S. and Shewry, P. R. 2009. Identifying traits to improve the nitrogen economy of wheat: recent advances and future prospects. Field Crops Research. 114, pp. 329-342. https://doi.org/10.1016/j.fcr.2009.09.005

Effectors, effectors et encore des effectors: the XIV International Congress on Molecular-Plant Microbe Interactions, Quebec

G - Articles in popular magazines and other technical publications

Walton, J. D., Avis, T. J., Alfano, J. R., Gijzen, M., Spanu, P., Hammond-Kosack, K. E. and Sanchez, M. 2009. Effectors, effectors et encore des effectors: the XIV International Congress on Molecular-Plant Microbe Interactions, Quebec. Molecular Plant-Microbe Interactions - MPMI. 22 (12), pp. 1479-1483. https://doi.org/10.1094/MPMI-22-12-1479

DArT markers: diversity analyses, genomes comparison, mapping and integration with SSR markers in Triticum monococcum

A - Papers appearing in refereed journals

Jing, H-C., Bayon, C., Kanyuka, K., Berry, S., Wenzl, P., Huttner, E., Kilian, A. and Hammond-Kosack, K. E. 2009. DArT markers: diversity analyses, genomes comparison, mapping and integration with SSR markers in Triticum monococcum. BMC Genomics. 10, p. 458 (17pp). https://doi.org/10.1186/1471-2164-10-458

Remobilization of leaf S compounds and senescence in response to restricted sulphate supply during the vegetative stage of oilseed rape are affected by mineral N availability

A - Papers appearing in refereed journals

Dubousset, L., Abdallah, M., Desfeux, A. S., Etienne, P., Meuriot, F., Hawkesford, M. J., Gombert, J., Segura, R., Bataille, M-P., Reze, S., Bonnefoy, J., Ameline, A. F., Ourry, A., Le Dily, F. and Avice, J. C. 2009. Remobilization of leaf S compounds and senescence in response to restricted sulphate supply during the vegetative stage of oilseed rape are affected by mineral N availability. Journal of Experimental Botany. 60, pp. 3239-3252. https://doi.org/10.1093/jxb/erp172

High-resolution melting analysis of cDNA-derived PCR amplicons for rapid and cost-effective identification of novel alleles in barley

A - Papers appearing in refereed journals

Hofinger, B. J., Jing, H-C., Hammond-Kosack, K. E. and Kanyuka, K. 2009. High-resolution melting analysis of cDNA-derived PCR amplicons for rapid and cost-effective identification of novel alleles in barley. Theoretical and Applied Genetics. 119, pp. 851-865. https://doi.org/10.1007/s00122-009-1094-2

High resolution melting curve analysis for mutation detection in plants: a case study in barley

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C. G., Baldwin, T., Jing, H-C., Hammond-Kosack, K. E. and Kanyuka, K. 2009. High resolution melting curve analysis for mutation detection in plants: a case study in barley. Abstracts Monogram Network Workshop, Bristol, 29 April-1 May 2009 . pp. 28

Molecular characterization and functional analysis of MgNLP the sole NPP1 domain-containing protein, from the fungal wheat leaf pathogen Mycosphaerella graminicola

A - Papers appearing in refereed journals

Motteram, J., Kufner, I., Deller, S., Brunner, F., Hammond-Kosack, K. E., Nurnberger, T. and Rudd, J. J. 2009. Molecular characterization and functional analysis of MgNLP the sole NPP1 domain-containing protein, from the fungal wheat leaf pathogen Mycosphaerella graminicola. Molecular Plant-Microbe Interactions - MPMI. 22 (7), pp. 790-799. https://doi.org/10.1094/MPMI-22-7-0790

Characterization of two unusual features of resistance to Soilborne cereal mosaic virus in hexaploid wheat: leakiness and gradual elimination of viral coat protein from infected root tissues

A - Papers appearing in refereed journals

Lyons, R., Kutluk Yilmaz, N. D., Powers, S. J., Hammond-Kosack, K. E. and Kanyuka, K. 2009. Characterization of two unusual features of resistance to Soilborne cereal mosaic virus in hexaploid wheat: leakiness and gradual elimination of viral coat protein from infected root tissues. Molecular Plant-Microbe Interactions - MPMI. 22 (5), pp. 560-574. https://doi.org/10.1094/MPMI-22-5-0560

Lack of the plant signalling component SGT1b enhances disease resistance to Fusarium culmorum in Arabidopsis buds and flowers

A - Papers appearing in refereed journals

Cuzick, A., Maguire, K. and Hammond-Kosack, K. E. 2009. Lack of the plant signalling component SGT1b enhances disease resistance to Fusarium culmorum in Arabidopsis buds and flowers. New Phytologist. 181, pp. 901-912. https://doi.org/10.1111/j.1469-8137.2008.02712.x

Sulfonate desulfurization in Rhodococcus from wheat rhizosphere communities

A - Papers appearing in refereed journals

Schmalenberger, A., Hodge, S., Hawkesford, M. J. and Kertesz, M. A. 2009. Sulfonate desulfurization in Rhodococcus from wheat rhizosphere communities. FEMS Microbiology Ecology. 67 (1), pp. 140-150. https://doi.org/10.1111/j.1574-6941.2008.00602.x

A sulphur deficiency-induced gene, sdi1 , involved in the utilization of stored sulphate pools under sulphur-limiting conditions has potential as a diagnostic indicator of sulphur nutritional status

A - Papers appearing in refereed journals

Howarth, J. R., Parmar, S., Barraclough, P. B. and Hawkesford, M. J. 2009. A sulphur deficiency-induced gene, sdi1 , involved in the utilization of stored sulphate pools under sulphur-limiting conditions has potential as a diagnostic indicator of sulphur nutritional status. Plant Biotechnology Journal. 7 (2), pp. 200-209. https://doi.org/10.1111/j.1467-7652.2008.00391.x

Functional analysis of reactive oxygen species-related genes in the wheat pathogen Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2008. Functional analysis of reactive oxygen species-related genes in the wheat pathogen Mycosphaerella graminicola. Abstracts Gordon Research Conference on Cellular and Molecular Fungal Biology, Holderness, New Hampshire, 29 June - 4 July 2008 .

Genomic analysis of transcriptional regulators of Fusarium graminearum

C2 - Non-edited contributions to conferences

Coulson, R., Urban, M., Antoniw, J. F. and Hammond-Kosack, K. E. 2008. Genomic analysis of transcriptional regulators of Fusarium graminearum.

Metabolomic and phenotypic analyses of Fusarium graminearum wild-type and mutant strains

C2 - Non-edited contributions to conferences

Urban, M., Lowe, R., Allwood, W., Ward, J. L., Beale, M. H. and Hammond-Kosack, K. E. 2008. Metabolomic and phenotypic analyses of Fusarium graminearum wild-type and mutant strains.

NanoSIMS analysis of trace elements in cereal grain

C2 - Non-edited contributions to conferences

Moore, K. L., Grovenor, C. R. M., Zhao, F-J., McGrath, S. P., Hawkesford, M. J. and Shewry, P. R. 2008. NanoSIMS analysis of trace elements in cereal grain. Abstracts COST 859 WG3 Meeting on Challenges on Improving Quality and Safety of Food Crops, Lillehammer, 1-4 September 2008 .

The infection biology and transcriptome of wheat pathogen Fusarium graminearum

C2 - Non-edited contributions to conferences

Brown, N. A., Urban, M., Van De Meene, A. and Hammond-Kosack, K. E. 2008. The infection biology and transcriptome of wheat pathogen Fusarium graminearum. Abstracts Syngenta Student Showcase, Jealott's Hill, 16 September 2008 .

Pathogenicity determinants of Fusarium graminearum on wheat ears

C2 - Non-edited contributions to conferences

Beacham, A. M., Urban, M., Antoniw, J. F. and Hammond-Kosack, K. E. 2008. Pathogenicity determinants of Fusarium graminearum on wheat ears. Abstracts BSPP Presidentail Meeting on Cereal Pathosystems, London, 16-17 December 2008 . pp. 11

Analysis of the newly sequenced Fusarium genomes using PHI-Base and ONDEX

C2 - Non-edited contributions to conferences

Beacham, A. M., Cavenet, C., Taubert, J., Urban, M., Antoniw, J. F., Rawlings, C. J. and Hammond-Kosack, K. E. 2008. Analysis of the newly sequenced Fusarium genomes using PHI-Base and ONDEX.

Pathogenicity determinants of Fusarium graminearum on wheat ears

C2 - Non-edited contributions to conferences

Beacham, A. M., Urban, M., Antoniw, J. F. and Hammond-Kosack, K. E. 2008. Pathogenicity determinants of Fusarium graminearum on wheat ears. Abstracts Syngenta Student Showcase, Jealott's Hill, 22 September 2008 .

Pathogenicity determinants of Fusarium graminearum on wheat ears

C2 - Non-edited contributions to conferences

Beacham, A. M., Antoniw, J. F., Urban, M. and Hammond-Kosack, K. E. 2008. Pathogenicity determinants of Fusarium graminearum on wheat ears. Asbtracts 9th European Conference on Fungal Genetics (ECFG9), Edinburgh, 5-8 April 2008 . pp. PR1.24

Fusarium graminearum kinome analysis and progress report. Confidential report to industrial sponsor

D1 - Technical reports: non-confidential

Antoniw, J. F., Urban, M. and Hammond-Kosack, K. E. 2008. Fusarium graminearum kinome analysis and progress report. Confidential report to industrial sponsor.

How can molecular genetic informtion on plant pathogens benefit disease management?

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E. 2008. How can molecular genetic informtion on plant pathogens benefit disease management? Abstracts BSPP Presidential Meeting on Cereal Pathosystems, London, 16-17 December 2008 . pp. 5

Plant resistance signalling hijacked by a necrotrophic fungal pathogen

A - Papers appearing in refereed journals

Hammond-Kosack, K. E. and Rudd, J. J. 2008. Plant resistance signalling hijacked by a necrotrophic fungal pathogen. Plant Signaling and Behavior. 3, pp. 993-995.

Reactive oxygen species-related genes in the wheat pathogen Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2008. Reactive oxygen species-related genes in the wheat pathogen Mycosphaerella graminicola. Abstracts BSPP Preseidential Meeting on Cereal Pathosystems, London, 16-17 December 2008 . pp. 9

The infection biology and transcriptome of wheat pathogen Fusarium graminearum

C2 - Non-edited contributions to conferences

Brown, N. A., Urban, M., Van De Meene, A. and Hammond-Kosack, K. E. 2008. The infection biology and transcriptome of wheat pathogen Fusarium graminearum. Abstracts BSPP Presidential Meeting on Cereal Pathosystems, London, 16-17 December 2008 . pp. 13

Triticum monococcum, an ancient relative of wheat, is a rich source of resistance to septoria tritici blotch disease

G - Articles in popular magazines and other technical publications

Jing, H-C., Gutteridge, R. J. and Hammond-Kosack, K. E. 2008. Triticum monococcum, an ancient relative of wheat, is a rich source of resistance to septoria tritici blotch disease. RRA Newsletter. 27, pp. 3-4.

Phenotypic and genetic analysis of the Triticum monococcum-Mycosphaerella graminicola interaction

A - Papers appearing in refereed journals

Jing, H-C., Lovell, D. J., Gutteridge, R. J., Jenk, D., Kornyukhin, D., Mitrofanova, O., Kema, G. H. J. and Hammond-Kosack, K. E. 2008. Phenotypic and genetic analysis of the Triticum monococcum-Mycosphaerella graminicola interaction. New Phytologist. 179, pp. 1121-1132. https://doi.org/10.1111/j.1469-8137.2008.02526.x

Take-all and the Wheat Genetic Improvement Network (WGIN)

G - Articles in popular magazines and other technical publications

Gutteridge, R. J. and Hammond-Kosack, K. E. 2008. Take-all and the Wheat Genetic Improvement Network (WGIN). RRA Newsletter. 27, pp. 1-2.

Assessment of the A.E. Watkins wheat collection in 2008 for resistance to foliar, stem base and root diseases. Objectives 2 and 5

G - Articles in popular magazines and other technical publications

Gutteridge, R. J. and Hammond-Kosack, K. E. 2008. Assessment of the A.E. Watkins wheat collection in 2008 for resistance to foliar, stem base and root diseases. Objectives 2 and 5. WGIN Stakeholders' Newsletter. October, pp. 1-4.

Elements of host disease resistance signalling hijacked by Mycosphaerella graminicola during successful wheat leaf infection

C2 - Non-edited contributions to conferences

Rudd, J. J., Keon, J. P. R., Motteram, J., Pirie, E. J. and Hammond-Kosack, K. E. 2008. Elements of host disease resistance signalling hijacked by Mycosphaerella graminicola during successful wheat leaf infection. Abstracts 7th International Mycosphaerella and Stagonospora Symposium, Ascona, 18-22 August 2008 .

Investigating resistance mechanisms to furoviruses in wheat and barley

C2 - Non-edited contributions to conferences

Lyons, R., Yilmaz, N. D. K., Hammond-Kosack, K. E. and Kanyuka, K. 2008. Investigating resistance mechanisms to furoviruses in wheat and barley. Abstracts 14th International Congress of Virology, Istanbul, 10-15 August 2008 .

Characterisation of resistance to furoviruses in wheat and barley

C2 - Non-edited contributions to conferences

Lyons, R., Yilmaz, N. D. K., Zlatska, A., Hammond-Kosack, K. E. and Kanyuka, K. 2008. Characterisation of resistance to furoviruses in wheat and barley. Abstracts 7th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Quedlinburg, 31 August - 4 September 2008 .

Discovery of novel e1F4 alleles conferring broad spectrum resistance to bymoviruses by exploiting genetic diversity of natural barley germplasm

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C. G., Baldwin, T., Beaudoin, F., Hammond-Kosack, K. E. and Kanyuka, K. 2008. Discovery of novel e1F4 alleles conferring broad spectrum resistance to bymoviruses by exploiting genetic diversity of natural barley germplasm. Abstracts 7th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Quedlinburg, 31 August - 4 September 2008 . pp. 29

Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2008. Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola. Abstracts Molecular Biology of Plant Pathogens, Birnam, 17-19 September 2008 .

Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2008. Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola. Abstracts Syngenta Student Showcase, Jealott's Hill, 16 September 2008 .

Co-ordinated expression of amino acid metabolism in response to N and S deficiency during wheat grain filling

A - Papers appearing in refereed journals

Howarth, J. R., Parmar, S., Jones, J., Shepherd, C. E., Corol, D. I., Galster, A. M., Hawkins, N. D., Miller, S. J., Baker, J. M., Verrier, P. J., Ward, J. L., Beale, M. H., Barraclough, P. B. and Hawkesford, M. J. 2008. Co-ordinated expression of amino acid metabolism in response to N and S deficiency during wheat grain filling. Journal of Experimental Botany. 59, pp. 3675-3689. https://doi.org/10.1093/jxb/ern218

Identification and characterization of a novel efficient resistance response to the furoviruses SBWMV and SBCMV in barley

A - Papers appearing in refereed journals

Lyons, R., Hammond-Kosack, K. E. and Kanyuka, K. 2008. Identification and characterization of a novel efficient resistance response to the furoviruses SBWMV and SBCMV in barley. Molecular Plant-Microbe Interactions - MPMI. 21 (9), pp. 1193-1204. https://doi.org/10.1094/MPMI-21-9-1193

Exploring resistance in wheat to Fusarium ear blight disease

C2 - Non-edited contributions to conferences

Lee, S. and Hammond-Kosack, K. E. 2008. Exploring resistance in wheat to Fusarium ear blight disease.

Exploring resistance in wheat to fusarium ear blight disease

C2 - Non-edited contributions to conferences

Lee, S. and Hammond-Kosack, K. E. 2008. Exploring resistance in wheat to fusarium ear blight disease. Abstracts 10th International Fusarium Workshop, Alghero, 30 August-2 September 2008 .

Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2008. Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola. Abstracts 7th International Mycosphaerella and Stagonospora Symposium, Ascona, 18-22 August 2008 .

NPR1 and EDS11 contribute to host resistance against Fusarium culmorum in Arabidopsis buds and flowers

A - Papers appearing in refereed journals

Cuzick, A., Lee, S., Gezan, S. and Hammond-Kosack, K. E. 2008. NPR1 and EDS11 contribute to host resistance against Fusarium culmorum in Arabidopsis buds and flowers. Molecular Plant Pathology. 9 (5), pp. 697-704. https://doi.org/10.1111/J.1364-3703.2008.00488.X

Regulation of sulfate uptake, expression of the sulfate transporters Sultr1;1 and Sultr1;2, and APS reductase in Chinese cabbage (Brassica pekinensis) as affected by atmospheric H2S nutrition and sulfate deprivation

A - Papers appearing in refereed journals

Koralewska, A., Stuiver, C. E. E., Posthumus, F. S., Kopriva, S., Hawkesford, M. J. and De Kok, L. J. 2008. Regulation of sulfate uptake, expression of the sulfate transporters Sultr1;1 and Sultr1;2, and APS reductase in Chinese cabbage (Brassica pekinensis) as affected by atmospheric H2S nutrition and sulfate deprivation. Functional Plant Biology. 35, pp. 318-327. https://doi.org/10.1071/FP07283

Uptake, distribution and subcellular transport of sulfate

B - Book chapters etc edited externally

Hawkesford, M. J. 2008. Uptake, distribution and subcellular transport of sulfate. in: Leustek, T., Hell, R., Knaff, D. and Dahl, C. (ed.) Sulfur metabolism in phototrophic organisms Springer, Dordrecht. pp. 15-30

Responses to sulfur limitation in maize

B - Book chapters etc edited externally

Bouranis, D. L., Buchner, P. H., Chorianopoulou, S. N., Hopkins, L., Protonotarios, V. E., Siyiannis, V. F. and Hawkesford, M. J. 2008. Responses to sulfur limitation in maize. in: Singh, S., Umar, S. and Khan, N. A. (ed.) Sulfur assimilation and abiotic stress in plants Springer, Berlin. pp. 1-19

Identification of novel resistance phenotypes to Soil-borne cereal mosaic virus (SBCMV) and Soil-borne wheat mosaic virus (SBWMV) in barley

C2 - Non-edited contributions to conferences

Lyons, R., Hammond-Kosack, K. E. and Kanyuka, K. 2008. Identification of novel resistance phenotypes to Soil-borne cereal mosaic virus (SBCMV) and Soil-borne wheat mosaic virus (SBWMV) in barley. Abstracts Plant Virus Workshop, 162nd Meeting of the Society for General Microbiology, Edinburgh, 1 April 2008 .

The wheat mitogen-activated protein kinses TaMPK3 and TaMPK6 are differentially regulated at multiple levels during compatible disease interactions with Mycosphaerella graminicola

A - Papers appearing in refereed journals

Rudd, J. J., Keon, J. and Hammond-Kosack, K. E. 2008. The wheat mitogen-activated protein kinses TaMPK3 and TaMPK6 are differentially regulated at multiple levels during compatible disease interactions with Mycosphaerella graminicola. Plant Physiology. 147, pp. 802-815. https://doi.org/10.1104/pp.108.119511

The role of Variovorax and other Comamonadaceae in sulfur transformations by microbial wheat rhizosphere communities exposed to different sulfur fertilization regimes

A - Papers appearing in refereed journals

Schmalenberger, A., Hodge, S., Bryant, A., Hawkesford, M. J., Singh, B. K. and Kertesz, M. A. 2008. The role of Variovorax and other Comamonadaceae in sulfur transformations by microbial wheat rhizosphere communities exposed to different sulfur fertilization regimes. Environmental Microbiology. 10 (6), pp. 1486-1500. https://doi.org/10.1111/j.1462-2920.2007.01564.x

Variation in molybdenum content across broadly distributed populations of Arabidopsis thaliana is controlled by a mitochondrial molybdenum transporter (MOT1)

A - Papers appearing in refereed journals

Baxter, I., Muthukumar, B., Park, H. C., Buchner, P. H., Lahner, B., Danku, J., Zhao, K., Lee, J., Hawkesford, M. J., Guerinot, M. L. and Salt, D. E. 2008. Variation in molybdenum content across broadly distributed populations of Arabidopsis thaliana is controlled by a mitochondrial molybdenum transporter (MOT1). PLOS Genetics. 4, p. e1000004. https://doi.org/10.1371/journal.pgen.1000004

Resistance genes (R genes) in plants

B - Book chapters etc edited externally

Hammond-Kosack, K. E. and Kanyuka, K. 2008. Resistance genes (R genes) in plants. in: Encyclopedia of life sciences John Wiley & Sons Chichester, West Sussex.

Virus-induced gene silencing (VIGS) as a tool for functional genomics in wheat

C2 - Non-edited contributions to conferences

Kanyuka, K. and Hammond-Kosack, K. E. 2008. Virus-induced gene silencing (VIGS) as a tool for functional genomics in wheat. Abstracts 5th UK Cereal Genetics and Genomics Workshop, Rothamsted, 16-18 April 2008 .

The infection biology of Fusarium graminearum single gene deletion strains

C2 - Non-edited contributions to conferences

Brown, N. A., Baldwin, T., Urban, M., Van De Meene, A. and Hammond-Kosack, K. E. 2008. The infection biology of Fusarium graminearum single gene deletion strains. Abstracts 9th European Conference on Fungal Genetics (ECFG9), Edinburgh, 5-8 April 2008 .

PHI-base update: additions to the pathogen-host interaction database

A - Papers appearing in refereed journals

Winnenburg, R., Urban, M., Beacham, A., Baldwin, T. K., Holland, S., Lindeberg, M., Hansen, H., Rawlings, C. J., Hammond-Kosack, K. E. and Kohler, J. 2008. PHI-base update: additions to the pathogen-host interaction database. Nucleic Acids Research. 36, pp. D572-D576. https://doi.org/10.1093/nar/gkm858

Fusarium graminearum gene deletion mutants map1 and tri5 reveal similarities and differences in the pathogenicity requirements to cause disease on Arabidopsis and wheat floral tissue

A - Papers appearing in refereed journals

Cuzick, A., Urban, M. and Hammond-Kosack, K. E. 2008. Fusarium graminearum gene deletion mutants map1 and tri5 reveal similarities and differences in the pathogenicity requirements to cause disease on Arabidopsis and wheat floral tissue. New Phytologist. 177 (4), pp. 990-1000. https://doi.org/10.1111/j.1469-8137.2007.02333.x

Molecular genetic and genomic analysis of wheat-pathogen interactions

C2 - Non-edited contributions to conferences

Jing, H-C., Rudd, J. J., Kanyuka, K. and Hammond-Kosack, K. E. 2007. Molecular genetic and genomic analysis of wheat-pathogen interactions. Abstracts ENDURE Workshop RA4.2 Exploitation of Plant Genetic Resistance, Angers, 5-6 July 2007 . pp. 13

Exploiting Triticum monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships (RRes) (Objective 6)

G - Articles in popular magazines and other technical publications

Jing, H-C., Gutteridge, R. and Hammond-Kosack, K. E. 2007. Exploiting Triticum monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships (RRes) (Objective 6). WGIN Stakeholders' Newsletter. October, pp. 3-6.

Exploiting Triticum monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships (RRes) Objective 6

G - Articles in popular magazines and other technical publications

Jing, H-C. and Hammond-Kosack, K. E. 2007. Exploiting Triticum monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships (RRes) Objective 6. Special WGIN Resources Newsletter. March 2007, pp. 2-6.

Wheat pathogens affecting yield and quality

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E. 2007. Wheat pathogens affecting yield and quality. Abstracts China-UK Wheat Workshop, Beijing, 10-11 December 2007 . pp. 20-21

Can information on the mode of pathogen attack be used to formulate novel crop protection strategies?

C1 - Edited contributions to conferences/learned societies

Rudd, J. J., Jing, H-C. and Hammond-Kosack, K. E. 2007. Can information on the mode of pathogen attack be used to formulate novel crop protection strategies? Proceedings 16th International Plant Protection Congress, Glasgow, 15-18 October 2007 . pp. 706-707

Specific resistance of wheat to Mycosphaerella graminicola operates to avoid MAPK activation and programmed cell death (PCD) associated with compatible interactions

C2 - Non-edited contributions to conferences

Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Specific resistance of wheat to Mycosphaerella graminicola operates to avoid MAPK activation and programmed cell death (PCD) associated with compatible interactions. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 .

Triticum monococcum as a reference species for wheat genetics and genomics

C2 - Non-edited contributions to conferences

Jing, H-C., Bayon, C., Gutteridge, R., Kornyukhin, D., Kanyuka, K., Orford, S., Zlatska, A., Mitrofanova, O. P., Phillips, A. L. and Hammond-Kosack, K. E. 2007. Triticum monococcum as a reference species for wheat genetics and genomics. Abstracts 4th UK Small Grain Cereal Genetics and Genomics Workshop: From Genes to Traits, Cambridge, 14-16 March 2007 .

A re-emerging threat to wheat crops - Black Stem Rust

G - Articles in popular magazines and other technical publications

Hammond-Kosack, K. E. 2007. A re-emerging threat to wheat crops - Black Stem Rust. RRA Newsletter. Issue 24, p. 2.

Phenotypic and metabolomic analyses of the Fusarium graminearum SNF1 mutant

C2 - Non-edited contributions to conferences

Urban, M., Antoniw, J. F., Allwood, W., Beacham, A., Ward, J. L., Beale, M. H. and Hammond-Kosack, K. E. 2007. Phenotypic and metabolomic analyses of the Fusarium graminearum SNF1 mutant. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 . pp. 212

Functional evaluation of plant defence signalling against Fusarium ear blight disease in Arabidopsis

C2 - Non-edited contributions to conferences

Cuzick, A., Urban, M., Maguire, K., Lee, S. and Hammond-Kosack, K. E. 2007. Functional evaluation of plant defence signalling against Fusarium ear blight disease in Arabidopsis. Abstracts BSPP Presidential Meeting 2007: Attack and Defence in Plant Disease, Bath, 12-14 September 2007 . pp. 52

Functional evaluation of plant defence signalling against Fusarium graminearum and F. culmorum in Arabidopsis floral and wheat floral and leaf tissue

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Cuzick, A., Lee, S., Daudi, A., Bass, C. G., Maguire, K. and Urban, M. 2007. Functional evaluation of plant defence signalling against Fusarium graminearum and F. culmorum in Arabidopsis floral and wheat floral and leaf tissue. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 . pp. 107-108

Identification of variation in adaptively important traits and genome-wide analysis of trait-marker associations in Triticum monococcum

A - Papers appearing in refereed journals

Jing, H-C., Kornyukhin, D., Kanyuka, K., Orford, S., Zlatska, A., Mitrofanova, O. P., Koebner, R. and Hammond-Kosack, K. E. 2007. Identification of variation in adaptively important traits and genome-wide analysis of trait-marker associations in Triticum monococcum. Journal of Experimental Botany. 58, pp. 3749-3764. https://doi.org/10.1093/jxb/erm225

DON mycotoxin biosynthesis by Fusarium species, a metabolomics perspective

C2 - Non-edited contributions to conferences

Lowe, R., Allwood, J. W., Urban, M., Beale, M. H., Ward, J. L. and Hammond-Kosack, K. E. 2007. DON mycotoxin biosynthesis by Fusarium species, a metabolomics perspective. Abstracts BSPP Presidential Meeting 2007: Attack and Defence in Plant Disease, Bath, 12-14 September 2007 . pp. 64

Molecular genetic analysis of resistance to Mycosphaerella graminicola in Triticum monococcum

C2 - Non-edited contributions to conferences

Jing, H-C., Rudd, J. J. and Hammond-Kosack, K. E. 2007. Molecular genetic analysis of resistance to Mycosphaerella graminicola in Triticum monococcum. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 .

Molecular phylogeny and evolution of RAR1, a conserved zinc-binding protein in eukaryotic organisms

C2 - Non-edited contributions to conferences

Jing, H-C. and Hammond-Kosack, K. E. 2007. Molecular phylogeny and evolution of RAR1, a conserved zinc-binding protein in eukaryotic organisms. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 . pp. 377-378

Strategies for increasing the selenium content of wheat

A - Papers appearing in refereed journals

Hawkesford, M. J. and Zhao, F-J. 2007. Strategies for increasing the selenium content of wheat. Journal of Cereal Science. 46 (3), pp. 282-292. https://doi.org/10.1016/j.jcs.2007.02.006

Differential host responses to Soil-borne Cereal Mosaic Virus (SBCMV) and Soil-borne Wheat Mosaic Virus (SBWMV) in barley

C2 - Non-edited contributions to conferences

Lyons, R., Hammond-Kosack, K. E. and Kanyuka, K. 2007. Differential host responses to Soil-borne Cereal Mosaic Virus (SBCMV) and Soil-borne Wheat Mosaic Virus (SBWMV) in barley. Abstracts Advances in Virology, Greenwich, 11-12 September 2007 .

Differential host responses to Soil-borne Cereal Mosaic Virus (SBCMV) and Soil-borne Wheat Mosaic Virus (SBWMV) in barley

C2 - Non-edited contributions to conferences

Lyons, R., Hammond-Kosack, K. E. and Kanyuka, K. 2007. Differential host responses to Soil-borne Cereal Mosaic Virus (SBCMV) and Soil-borne Wheat Mosaic Virus (SBWMV) in barley. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 .

The characteristic high sulfate content in Brassica oleracea is controlled by the expression and activity of sulfate transporters

A - Papers appearing in refereed journals

Koralewska, A., Posthumus, F. S., Stuiver, C. E. E., Buchner, P. H., Hawkesford, M. J. and De Kok, L. J. 2007. The characteristic high sulfate content in Brassica oleracea is controlled by the expression and activity of sulfate transporters. Plant Biology. 9 (5), pp. 654-661. https://doi.org/10.1055/s-2007-965438

Grain fungus genome published

G - Articles in popular magazines and other technical publications

Antoniw, J. F., Baldwin, T., Urban, M. and Hammond-Kosack, K. E. 2007. Grain fungus genome published. EPSO News. No. 3.

Towards fine mapping of resistance genes to Septoria tritici leaf blotch in hexaploid and diploid wheat

C2 - Non-edited contributions to conferences

Kanyuka, K., Jing, H., Rudd, J. J., Brown, J. and Hammond-Kosack, K. E. 2007. Towards fine mapping of resistance genes to Septoria tritici leaf blotch in hexaploid and diploid wheat. Abstracts 1st Workshop on TritiGenCOST Action FA0604: Triticae Genomics for the Advancement of Essential European Crops, Puerto de la Cruz, Tenerife, 1-3 October 2007 . pp. 54

Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat. Abstracts Molecular Biology of Plant Pathogens (MBPP) Meeting, Bath, 10-11 September 2007 .

Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat. Abstracts BSPP Presidential Meeting 2007: Attack and Defence in Plant Disease, Bath, 12-14 September 2007 . pp. 53

Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat. Abstracts Syngenta Student Showcase, Jealott's Hill, September 2007 .

Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears

C2 - Non-edited contributions to conferences

Beacham, A., Antoniw, J. F., Urban, M. and Hammond-Kosack, K. E. 2007. Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears. Abstracts BSPP Presidential Meeting 2007: Attack and Defence in Plant Disease, Bath, 12-14 September 2007 .

Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears

C2 - Non-edited contributions to conferences

Beacham, A., Antoniw, J. F., Urban, M. and Hammond-Kosack, K. E. 2007. Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears. Abstracts Molecular Biology of Plant Pathogens (MBPP) Meeting, Bath, 10-11 September 2007 .

Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears

C2 - Non-edited contributions to conferences

Beacham, A., Antoniw, J. F., Urban, M. and Hammond-Kosack, K. E. 2007. Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears. Abstracts Syngenta Student Showcase, Jealott's Hill, September 2007 .

Nitrogen use efficiency and resource allocation in wheat

C2 - Non-edited contributions to conferences

Hawkesford, M. J., Howarth, J. R. and Barraclough, P. B. 2007. Nitrogen use efficiency and resource allocation in wheat. Abstracts 4th UK Small Grain Cereals Genetic and Genomics Workshop: From Genes to Traits, Cambridge, 14-16 March 2007 .

Leaf developmental stage affects sulfate depletion and specific sulfate transporter expression during sulfur deprivation in Brassica napus L.

A - Papers appearing in refereed journals

Parmar, S., Buchner, P. H. and Hawkesford, M. J. 2007. Leaf developmental stage affects sulfate depletion and specific sulfate transporter expression during sulfur deprivation in Brassica napus L. Plant Biology. 9 (5), pp. 647-653. https://doi.org/10.1055/s-2007-965428

The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization

A - Papers appearing in refereed journals

Cuomo, C. A., Guldener, U., Xu, J-R., Trail, F., Turgeon, B. G., Di Pietro, A., Walton, J. D., Ma, L-J., Baker, S. E., Rep, M., Adam, G., Antoniw, J. F., Baldwin, T., Calvo, S., Chang, Y-L., Decaprio, D., Gale, L. R., Gnerre, S., Goswami, R. S., Hammond-Kosack, K. E., Harris, L. J., Hilburn, K., Kennell, J. C., Kroken, S., Magnuson, J. K., Mannhaupt, G., Mauceli, E., Mewes, H-W., Mitterbauer, R., Munsterkotter, M., Nelson, D., O'donnell, K., Ouellet, T., Qi, W., Quesneville, H., Roncero, M. I. G., Seong, K-Y., Tetko, I. V., Urban, M., Waalwijk, C., Ward, T. J., Yao, J., Birren, B. W. and Kistler, H. C. 2007. The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization. Science - AAAS. 317, pp. 1400-1402. https://doi.org/10.1126/science.1143708

Identifying resistance to Fusarium Ear Blight in wheat

C2 - Non-edited contributions to conferences

Lee, S., Daudi, A. and Hammond-Kosack, K. E. 2007. Identifying resistance to Fusarium Ear Blight in wheat. Abstracts BSPP Presidential Meeting 2007: Attack and Defence in Plant Disease, Bath, 12-14 September 2007 .

Exploring resistance to Fusarium ear blight

C2 - Non-edited contributions to conferences

Lee, S. and Hammond-Kosack, K. E. 2007. Exploring resistance to Fusarium ear blight. Abstracts Molecular Biology of Plant Pathogens (MBPP) Meeting, Bath, 10-11 September 2007 .

PHI-base: a database of experimentally verified pathogenicity, virulence and effector genes in fungal, oomycete and bacterial pathogens of animals and plants

C2 - Non-edited contributions to conferences

Baldwin, T. K., Winnenburg, R., Beacham, A., Urban, M., Rawlings, C. J., Koehler, J. and Hammond-Kosack, K. E. 2007. PHI-base: a database of experimentally verified pathogenicity, virulence and effector genes in fungal, oomycete and bacterial pathogens of animals and plants. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 .

Expression and functional analysis of metal transporter genes in two contrasting ecotypes of the hyperaccumulator Thlaspi caerulescens

A - Papers appearing in refereed journals

Plaza, S., Tearall, K. L., Zhao, F-J., Buchner, P. H., McGrath, S. P. and Hawkesford, M. J. 2007. Expression and functional analysis of metal transporter genes in two contrasting ecotypes of the hyperaccumulator Thlaspi caerulescens. Journal of Experimental Botany. 58, pp. 1717-1728. https://doi.org/10.1093/jxb/erm025

Distribution of microsatellite alleles linked with Sbm 1 locus and controlled resistance to soil-borne cereal mosaic virus (SBCMV) among accessions of Ukrainian common wheat varieties cultivated in 1900-2006 and their relation to world wheat germplasm

C2 - Non-edited contributions to conferences

Zlatska, A., Kanyuka, K. and Hammond-Kosack, K. E. 2007. Distribution of microsatellite alleles linked with Sbm 1 locus and controlled resistance to soil-borne cereal mosaic virus (SBCMV) among accessions of Ukrainian common wheat varieties cultivated in 1900-2006 and their relation to world wheat germplasm. Abstracts 15th International Conference on Plant and Animal Genomes, San Diego, 13-17 January 2007 .

Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat. Abstracts 24th Fungal Genetics Conference, Asilomar, 20-25 March 2007 . pp. 152

Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host

A - Papers appearing in refereed journals

Keon, J. P. R., Antoniw, J. F., Carzaniga, R., Deller, S., Ward, J. L., Baker, J. M., Beale, M. H., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host. Molecular Plant-Microbe Interactions - MPMI. 20 (2), pp. 178-193. https://doi.org/10.1094/MPMI-20-2-0178

Molecular tools for the study of Fusarium ear blight caused by Fusarium graminearum and Fusarium culmorum

C2 - Non-edited contributions to conferences

Bass, C. G., Urban, M. and Hammond-Kosack, K. E. 2006. Molecular tools for the study of Fusarium ear blight caused by Fusarium graminearum and Fusarium culmorum. Abstracts 8th European Conference of Fungal Genetics, Vienna, 8-11 April 2006 . pp. 364

Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host

C2 - Non-edited contributions to conferences

Keon, J. P. R., Antoniw, J. F., Carzaniga, R., Deller, S., Ward, J. L., Baker, J. M., Beale, M. H., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host. Abstracts 3rd COGEME Interest Group Meeting, Manchester, 7-8 November 2006 .

The transcriptional changes of a hemibiotrophic fungal pathogen during successful adaptation to hypersensitive response-like programmed cell death of its plant host

C2 - Non-edited contributions to conferences

Keon, J. P. R., Antoniw, J. F., Carzaniga, R., Hammond-Kosack, K. E. and Rudd, J. J. 2006. The transcriptional changes of a hemibiotrophic fungal pathogen during successful adaptation to hypersensitive response-like programmed cell death of its plant host. Abstracts 8th European Conference on Fungal Genetics, Vienna, 8-11 April 2006 . pp. 351

Exploiting T. monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships

G - Articles in popular magazines and other technical publications

Jing, H-C and Hammond-Kosack, K. E. 2006. Exploiting T. monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships. WGIN Stakeholders' Newsletter. April, pp. 2-3.

Exploiting T. monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships

G - Articles in popular magazines and other technical publications

Phillips, A. L., Jing, H-C. and Hammond-Kosack, K. E. 2006. Exploiting T. monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships. WGIN Stakeholders' Newsletter. October, pp. 2-4.

Building trans-Atlantic links in fight against plant pathogen

G - Articles in popular magazines and other technical publications

Hammond-Kosack, K. E. 2006. Building trans-Atlantic links in fight against plant pathogen. BBSRC Business. October 2006, p. 4.

The host: Resistance gene isolation and realising the potential

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E. 2006. The host: Resistance gene isolation and realising the potential. Abstracts British Society for Plant Pathology 25th Anniversary Celebratory Meeting, London, 19 December 2006 .

BIOEXPLOIT Project

G - Articles in popular magazines and other technical publications

Hammond-Kosack, K. E., Tomas, J. and Smant, G. 2006. BIOEXPLOIT Project. EUCARPIA Bulletin. 33, pp. 32-35.

To build pyramids of major R genes and QTLs by marker-assisted introgression into elite material. BIOEXPLOIT Progress Report D5.2.1 on Workpackage WP5.2

D1 - Technical reports: non-confidential

Hammond-Kosack, K. E. 2006. To build pyramids of major R genes and QTLs by marker-assisted introgression into elite material. BIOEXPLOIT Progress Report D5.2.1 on Workpackage WP5.2.

Phenotypic analysis and functional characterisation of allele variance in customised core collections. BIOEXPLOIT Progress Report D4.2.1.2 on Workpackage WP4.2

D1 - Technical reports: non-confidential

Hammond-Kosack, K. E. 2006. Phenotypic analysis and functional characterisation of allele variance in customised core collections. BIOEXPLOIT Progress Report D4.2.1.2 on Workpackage WP4.2.

Dominant-negative interference with defence signalling by truncation mutations of the tomato Cf-9 disease resistance gene

A - Papers appearing in refereed journals

Barker, C. L., Baillie, B. K., Hammond-Kosack, K. E., Jones, J. D. G. and Jones, D. A. 2006. Dominant-negative interference with defence signalling by truncation mutations of the tomato Cf-9 disease resistance gene. The Plant Journal. 46, pp. 385-399. https://doi.org/10.1111/j.1365-313X.2006.02699.x

Molecular genetics to identify genes involved in the pathogenicity of Fusarium graminearum on wheat ears

C2 - Non-edited contributions to conferences

Baldwin, T. K., Urban, M. and Hammond-Kosack, K. E. 2006. Molecular genetics to identify genes involved in the pathogenicity of Fusarium graminearum on wheat ears. In %Abstracts Syngenta Postgraduate Symposium, Bracknell, 14 September 2006 .

Forward genetics for gene discovery in wheat

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Jing, H-C., Tearall, K., Phillips, A. L. and Kanyuka, K. 2006. Forward genetics for gene discovery in wheat. Abstracts Joint Wellcome/ESF Conference on Crop Genomics, Trait Analysis and Breeding, Hinxton, 8-11 November 2006 . pp. 22

Molecular genetics to identify genes involved in the pathogenicity of Fusarium graminearum on wheat ears

C2 - Non-edited contributions to conferences

Baldwin, T. K., Urban, M., Antoniw, J. F. and Hammond-Kosack, K. E. 2006. Molecular genetics to identify genes involved in the pathogenicity of Fusarium graminearum on wheat ears. Abstracts 9th International Fungal Biology Conference and 16th New Phytologist Symposium on Impact of Genomics on Fungal Biology, Nancy, 18-20 September 2006 . pp. 17-18

Triticum monococcum, the ancient grain which turned stone age nomads into farmers

C2 - Non-edited contributions to conferences

Jing, H-C., Lovell, D. J., Kornyukhin, D., Kanyuka, K., Orford, S., Field, M. A., Mitrofanova, O. P., Koebner, R. and Hammond-Kosack, K. E. 2006. Triticum monococcum, the ancient grain which turned stone age nomads into farmers. Abstracts 5th Plant Genomics European Meeting (Plant GEMs), Venice, 11-14 October 2006 . pp. P8.13

The Pathogen-Host Interactions database (PHI-base) provides insights into generic and novel themes of pathogenicity

A - Papers appearing in refereed journals

Baldwin, T. K., Winnenburg, R., Urban, M., Rawlings, C. J., Koehler, J. and Hammond-Kosack, K. E. 2006. The Pathogen-Host Interactions database (PHI-base) provides insights into generic and novel themes of pathogenicity. Molecular Plant-Microbe Interactions - MPMI. 19 (12), pp. 1451-1462. https://doi.org/10.1094/MPMI-19-1451

Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat. Abstracts COGEME Interest Group Meeting, Manchester, 7-8 November 2006 .

Functional evaluation of plant defence signalling against Fusarium ear blight disease in Arabidopsis

C2 - Non-edited contributions to conferences

Cuzick, A., Maguire, K., Lee, S. and Hammond-Kosack, K. E. 2006. Functional evaluation of plant defence signalling against Fusarium ear blight disease in Arabidopsis. Abstracts 17th International Conference on Arabidopsis Research, Madison, 28 June-2 July 2006 .

The Sbm 1 locus conferring resistance to Soil-borne cereal mosaic virus maps to a gene-rich region on 5DL in wheat

A - Papers appearing in refereed journals

Bass, C. G., Hendley, R., Adams, M. J., Hammond-Kosack, K. E. and Kanyuka, K. 2006. The Sbm 1 locus conferring resistance to Soil-borne cereal mosaic virus maps to a gene-rich region on 5DL in wheat. Genome. 49, pp. 1140-1148. https://doi.org/10.1139/G06-064

Improving the diversity of resistance in wheat to Fusarium ear blight disease

C2 - Non-edited contributions to conferences

Lee, S., Daudi, A. and Hammond-Kosack, K. E. 2006. Improving the diversity of resistance in wheat to Fusarium ear blight disease. Abstracts 9th European Fusarium Seminar, Wageningen, 19-22 September 2006 . pp. 100

Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat. Abstracts Molecular Biology of Plant Pathogens Meeting, Birnam, 18-20 September 2006 .

Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat. Abstracts Annual Scientific Meeting of the British Mycological Society, Birmingham, 4-7 September 2006 . pp. 68

Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat. Abstracts Syngenta Biology and Bioscience CASE PhD Open Day, Bracknell, 14 September 2006 .

Iron transporters may be involved in high Cd uptake by the hyperaccumulator species Thlaspi caerulescens

C2 - Non-edited contributions to conferences

McGrath, S. P., Plaza, S., Tearall, K. L., Hawkesford, M. J. and Zhao, F-J. 2006. Iron transporters may be involved in high Cd uptake by the hyperaccumulator species Thlaspi caerulescens. Abstracts 13th International Symposium on Iron Nutrition and Interactions in Plants, Montpellier, 3-7 July 2006 . pp. 61

Improving the diversity of race-non-specific resistance mechanisms available in wheat to combat fusarium ear blight disease

C2 - Non-edited contributions to conferences

Lee, S., Daudi, A. and Hammond-Kosack, K. E. 2006. Improving the diversity of race-non-specific resistance mechanisms available in wheat to combat fusarium ear blight disease. Abstracts Cranfield University Postgraduate Conference, Cranfield, 29 June 2006 .

Dynamics of aerenchyma distribution in the cortex of sulfate-deprived adventitious roots of maize

A - Papers appearing in refereed journals

Bouranis, D. L., Chorianopoulou, S. N., Kollias, C., Maniou, P., Protonotarios, V. E., Siyiannis, V. F. and Hawkesford, M. J. 2006. Dynamics of aerenchyma distribution in the cortex of sulfate-deprived adventitious roots of maize. Annals of Botany. 97, pp. 695-704. https://doi.org/10.1093/aob/mcl024

Control of sulfur uptake, assimilation and metabolism

B - Book chapters etc edited externally

Hawkesford, M. J., Howarth, J. R. and Buchner, P. H. 2006. Control of sulfur uptake, assimilation and metabolism. in: Mcmanus, M. T. and Plaxton, W. C. (ed.) Control of primary metabolism in plants Blackwell Publishing Oxford. pp. 348-372

Mechanical impedance and nutrient acquisition in rice

A - Papers appearing in refereed journals

Brown, D. A., Clark, L. J., Howarth, J. R., Parmar, S. and Hawkesford, M. J. 2006. Mechanical impedance and nutrient acquisition in rice. Plant and Soil. 280, pp. 65-76. https://doi.org/10.1007/s11104-005-2508-9

Host resistance to Soil-borne cereal mosaic virus and Soil-borne wheat mosiac virus

C2 - Non-edited contributions to conferences

Lyons, R., Hammond-Kosack, K. E. and Kanyuka, K. 2006. Host resistance to Soil-borne cereal mosaic virus and Soil-borne wheat mosiac virus. Abstracts International Conference on Advances in Plant Virology, Warwick, 5-7 April 2006 .

Managing sulphur metabolism in plants

A - Papers appearing in refereed journals

Hawkesford, M. J. and De Kok, L. J. 2006. Managing sulphur metabolism in plants. Plant, Cell and Environment. 29 (3), pp. 382-395. https://doi.org/10.1111/j.1365-3040.2005.01470.x

Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat. Abstracts 8th European Conference on Fungal Genetics, Vienna, 8-11 April 2006 . pp. 355

Optimising nutritional quality of crops

B - Book chapters etc edited externally

Hawkesford, M. J., Hoefgen, R., Galili, G., Amir, R., Angenon, G., Hesse, H., Rentsch, D., Schaller, J., Van Der Meer, I., Rouster, J., Banfalvi, Z., Polgar, Z., Szabados, L., Szopa, J. and Sirko, A. 2006. Optimising nutritional quality of crops. in: Jaiwal, P. K. (ed.) Metabolic engineering and molecular farming I. Plant genetic engineering, Vol. 7 Studium Press, Houston. pp. 85-116

Biofortification of UK food crops with selenium

A - Papers appearing in refereed journals

Broadley, M. R., White, P. J., Bryson, R. J., Meacham, M. C., Bowen, H. C., Johnson, S. E., Hawkesford, M. J., McGrath, S. P., Zhao, F-J., Breward, N., Harriman, M. and Tucker, M. 2006. Biofortification of UK food crops with selenium. Proceedings of the Nutrition Society. 65, pp. 169-181. https://doi.org/10.1079/PNS2006490

PHI-base: a new database for pathogen host interactions

A - Papers appearing in refereed journals

Winnenburg, R., Baldwin, T. K., Urban, M., Rawlings, C. J., Koehler, J. and Hammond-Kosack, K. E. 2006. PHI-base: a new database for pathogen host interactions. Nucleic Acids Research. 34 (1), pp. D459-D464. https://doi.org/10.1093/nar/gkj047

Bioinformatic and molecular genetic tools for identifying genes involved in the pathogenicity of Fusarium graminearum on wheat ears

C2 - Non-edited contributions to conferences

Baldwin, T. K., Winnenburg, R., Koehler, J., Urban, M. and Hammond-Kosack, K. E. 2005. Bioinformatic and molecular genetic tools for identifying genes involved in the pathogenicity of Fusarium graminearum on wheat ears. Abstracts Molecular Biology of Plant Pathogens Meeting, Ambleside, 19-21 September 2005 .

Bioinformatic and molecular genetic tools for identifying genes involved in the pathogenicity of Fusarium graminearum on wheat ears

C2 - Non-edited contributions to conferences

Baldwin, T. K., Winnenburg, R., Koehler, J., Urban, M. and Hammond-Kosack, K. E. 2005. Bioinformatic and molecular genetic tools for identifying genes involved in the pathogenicity of Fusarium graminearum on wheat ears. Abstracts ESF-EMBO Symposium on the Comparative Genomics of Eukaryotic Microorganisms, Sant Feliu de Guixols, 12-17 November 2005 .

The transcription-associated proteins of Fusarium graminearum identified by sequence clustering and profile analyses

C2 - Non-edited contributions to conferences

Coulson, R., Urban, M., Antoniw, J. F. and Hammond-Kosack, K. E. 2005. The transcription-associated proteins of Fusarium graminearum identified by sequence clustering and profile analyses. Abstracts 23rd Fungal Genetics Conference, Asilomar, 15-20 March 2005 . pp. 113

Microarray transcription profiling provides insights into metabolic regulation and stress adaptation during infection of wheat by the Septoria leaf blotch pathogen, Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Rudd, J. J., Keon, J. P. R., Antoniw, J. F., Skinner, W., Hargreaves, J. A. and Hammond-Kosack, K. E. 2005. Microarray transcription profiling provides insights into metabolic regulation and stress adaptation during infection of wheat by the Septoria leaf blotch pathogen, Mycosphaerella graminicola. Abstracts 23rd Fungal Genetics Conference, Asilomar, 15-20 March 2005 . pp. 137

Physiological adaptation of a fungal plant pathogen to its host environment revealed through microarray transcription profiling

C2 - Non-edited contributions to conferences

Rudd, J. J., Keon, J. P. R., Antoniw, J. F., Skinner, W., Hargreaves, J. A. and Hammond-Kosack, K. E. 2005. Physiological adaptation of a fungal plant pathogen to its host environment revealed through microarray transcription profiling. Abstracts COGEME Interest Group Meeting, Manchester, 8-9 November 2005 .

New approaches for durable disease resistance in wheat

C1 - Edited contributions to conferences/learned societies

Jing, H-C., Lovell, D. J., Kanyuka, K., Tearall, K. L., Phillips, A. L., Hammond-Kosack, K. E., Kornyukhin, D., Mitrofanova, O. P., Orford, S. and Koebner, R. 2005. New approaches for durable disease resistance in wheat. Proceedings BCPC International Congress - Crop Science and Technology, Glasgow, 31 October-2 November 2005 . pp. 963-970

Metabolic and stress adaptation by Mycosphaerella graminicola during sporulation in its host revealed through microarray transcription profiling

A - Papers appearing in refereed journals

Keon, J. P. R., Rudd, J. J., Antoniw, J. F., Skinner, W., Hargreaves, J. A. and Hammond-Kosack, K. E. 2005. Metabolic and stress adaptation by Mycosphaerella graminicola during sporulation in its host revealed through microarray transcription profiling. Molecular Plant Pathology. 6 (5), pp. 527-540. https://doi.org/10.1111/J.1364-3703.2005.00304.X

Sulfur transport and assimilation in plants in the postgenomic era

E - Books edited/written by staff member, alone/with others

Saito, K., De Kok, L. J., Stulen, I., Hawkesford, M. J., Schnug, E. and Sirko, A. Rennenberg, H. (ed.) 2005. Sulfur transport and assimilation in plants in the postgenomic era. Backhuys Publishers, Leiden Netherlands.

Microarray analysis of wheat grain transcriptome under nitrogen and sulphur deficiency

C2 - Non-edited contributions to conferences

Hawkesford, M. J., Lu, C., Howarth, J. R., Barraclough, P. B. and Edwards, K. J. 2005. Microarray analysis of wheat grain transcriptome under nitrogen and sulphur deficiency. Li, C. J. (ed.) Plant Nutrition for Food Security, Human Health and Environmental Protection. Proceedings 15th International Plant Nutrition Colloquium, Beijing, 14-19 September 2005 . Tsinghua University Press, Beijing. pp. 80-81

Understanding the regulation of sulfur nutrition - from sulfate transporter genes to the field

A - Papers appearing in refereed journals

Hawkesford, M. J., Buchner, P. H., Howarth, J. R. and Lu, C. 2005. Understanding the regulation of sulfur nutrition - from sulfate transporter genes to the field. Phyton. 45, pp. 57-67.

Functional evaluation of plant defence signalling against fusarium ear blight disease in arabidopsis

C2 - Non-edited contributions to conferences

Cuzick, A., Lee, S., Urban, M. and Hammond-Kosack, K. E. 2005. Functional evaluation of plant defence signalling against fusarium ear blight disease in arabidopsis. Abstracts LAMP (London Area Molecular Plant Sciences) Meeting, Wye, 5 October 2005 .

Agrobacterium tumefaciens-mediated transformation of Leptosphaeria app. and Oculimacula spp. with the reef coral gene DsRed and the jellyfish gene gfp

A - Papers appearing in refereed journals

Eckert, M., Maguire, K. L., Urban, M., Foster, S. J., Fitt, B. D. L., Lucas, J. A. and Hammond-Kosack, K. E. 2005. Agrobacterium tumefaciens-mediated transformation of Leptosphaeria app. and Oculimacula spp. with the reef coral gene DsRed and the jellyfish gene gfp. FEMS Microbiology Letters. 253, pp. 67-74. https://doi.org/10.1016/j.femsle.2005.09.041

Disease resistance in Triticum monococcum to major UK wheat pathogens: investigations of the roles of RAR1/SGT1

C2 - Non-edited contributions to conferences

Jing, H-C., Kornyukhin, D., Lovell, D. J., Kanyuka, K., Mitrofanova, O. P., Maguire, K., West, J. S. and Hammond-Kosack, K. E. 2005. Disease resistance in Triticum monococcum to major UK wheat pathogens: investigations of the roles of RAR1/SGT1. Abstracts Small Grain Cereals Workshop, Dundee, 9-11 March 2005 .

Functional evaluation of plant defence signalling against fusarium ear blight disease in arabidopsis

C2 - Non-edited contributions to conferences

Cuzick, A., Lee, S., Urban, M. and Hammond-Kosack, K. E. 2005. Functional evaluation of plant defence signalling against fusarium ear blight disease in arabidopsis. Abstracts 4th Plant Genomics European Meetings (Plant-GEMs 4), Amsterdam, 20-23 September 2005 .

Molecular genetic analyses of resistance to Soil-borne cereal mosaic virus (SBCMV) in bread wheat

C2 - Non-edited contributions to conferences

Bass, C. G., Hendley, R., Adams, M. J., Hammond-Kosack, K. E. and Kanyuka, K. 2005. Molecular genetic analyses of resistance to Soil-borne cereal mosaic virus (SBCMV) in bread wheat. Abstracts 10th Conference on Viral Diseases of Gramineae in Europe, Lovain-la-Neuve, 12-14 September 2005 .

Markedly different gene expression in wheat grown with organic or inorganic fertilizer

A - Papers appearing in refereed journals

Lu, C., Hawkesford, M. J., Barraclough, P. B., Poulton, P. R., Wilson, I. D., Barker, G. L. and Edwards, K. J. 2005. Markedly different gene expression in wheat grown with organic or inorganic fertilizer. Proceedings of the Royal Society of London Series B Biological Sciences. 272 (1575), pp. 1901-1908. https://doi.org/10.1098/rspb.2005.3161

Host plant resistance to Soil-borne wheat mosaic virus and Soil-borne cereal mosaic virus

C2 - Non-edited contributions to conferences

Lyons, R., Hammond-Kosack, K. E., Dickinson, M. and Kanyuka, K. 2005. Host plant resistance to Soil-borne wheat mosaic virus and Soil-borne cereal mosaic virus. Abstracts 10th Conference on Viral Diseases of Gramineae in Europe, Louvain-la-Neuve, 12-14 September 2005 . pp. 57

Functional evaluation of plant defence signalling against fusarium ear blight disease in arabidopsis

C2 - Non-edited contributions to conferences

Cuzick, A., Lee, S., Urban, M. and Hammond-Kosack, K. E. 2005. Functional evaluation of plant defence signalling against fusarium ear blight disease in arabidopsis. Abstracts 16th International Conference on Arabidopsis Research, Madison, 15-19 June 2005 . pp. No 530

Root sulphate uptake and distribution is mediated by multiple sulphate transporter isoforms

C1 - Edited contributions to conferences/learned societies

Buchner, P. H. and Hawkesford, M. J. 2005. Root sulphate uptake and distribution is mediated by multiple sulphate transporter isoforms. Roots and the Soil Environment II. Aspects of Applied Biology 73 . pp. 119-131

Using a suppression subtractive library-based approach to identify tobacco genes regulated in response to short-term sulphur deficit

A - Papers appearing in refereed journals

Wawrzynska, A., Lewandowska, M., Hawkesford, M. J. and Sirko, A. 2005. Using a suppression subtractive library-based approach to identify tobacco genes regulated in response to short-term sulphur deficit. Journal of Experimental Botany. 56, pp. 1575-1590.

Systems rebalancing of metabolism in response to sulfur deprivation, as revealed by metabolome analysis of Arabidopsis plants

A - Papers appearing in refereed journals

Nikiforova, V. J., Kopka, J., Tolstikov, V., Fiehn, O., Hopkins, L., Hawkesford, M. J., Hesse, H. and Hoefgen, R. 2005. Systems rebalancing of metabolism in response to sulfur deprivation, as revealed by metabolome analysis of Arabidopsis plants. Plant Physiology. 138, pp. 304-318.

O -acetylserine and the regulation of expression of genes encoding components for sulfate uptake and assimilation in potato

A - Papers appearing in refereed journals

Hopkins, L., Parmar, S., Blaszczyk, A., Hesse, H., Hoefgen, R. and Hawkesford, M. J. 2005. O -acetylserine and the regulation of expression of genes encoding components for sulfate uptake and assimilation in potato. Plant Physiology. 138, pp. 433-440.

Analysis of expressed sequence tags from the wheat leaf blotch pathogen Mycosphaerella graminicola (anamorph Septoria tritici)

A - Papers appearing in refereed journals

Keon, J. P. R., Antoniw, J. F., Rudd, J. J., Skinner, W., Hargreaves, J. A. and Hammond-Kosack, K. E. 2005. Analysis of expressed sequence tags from the wheat leaf blotch pathogen Mycosphaerella graminicola (anamorph Septoria tritici). Fungal Genetics and Biology. 42, pp. 376-389. https://doi.org/10.1016/j.fgb.2004.12.005

Sulphur

B - Book chapters etc edited externally

Hawkesford, M. J. 2005. Sulphur. in: Broadley, M. R. and White, P. J. (ed.) Plant nutritional genomics Blackwell Publishing Oxford. pp. 87-111

Ion-coupled transport of inorganic solutes

B - Book chapters etc edited externally

Hawkesford, M. J. and Miller, A. J. 2004. Ion-coupled transport of inorganic solutes. in: Blatt, M. R. (ed.) Membrane transport in plants Blackwell Publishing Oxford. pp. 105-134

Preface (to Sulphur metabolism in plants - integrating complexity. Special issue of the Journal of Experimental Botany, vol. 55(404))

G - Articles in popular magazines and other technical publications

Hawkesford, M. J. 2004. Preface (to Sulphur metabolism in plants - integrating complexity. Special issue of the Journal of Experimental Botany, vol. 55(404)). Journal of Experimental Botany. 55(404), p. iv.

Regulation of sulfate uptake and expression of sulfate transporter genes in Brassica oleracea as affected by atmospheric H2S and pedospheric sulfate nutrition

A - Papers appearing in refereed journals

Buchner, P. H., Stuiver, C. E. E., Westerman, S., Wirtz, M., Hell, R., Hawkesford, M. J. and De Kok, L. J. 2004. Regulation of sulfate uptake and expression of sulfate transporter genes in Brassica oleracea as affected by atmospheric H2S and pedospheric sulfate nutrition. Plant Physiology. 136 (2), pp. 3396-3408. https://doi.org/10.1104/pp.104.046441

DEFRA Wheat Genetic Improvement Network - WGIN (Annual/interim report for DEFRA project AR0709 2003-2004)

D1 - Technical reports: non-confidential

Hammond-Kosack, K. E. 2004. DEFRA Wheat Genetic Improvement Network - WGIN (Annual/interim report for DEFRA project AR0709 2003-2004).

Induction of infection plaques in Oculimacula spp. the cereal eyespot fungi

C2 - Non-edited contributions to conferences

Maguire, K., Dickinson, M., Bowyer, P., Perrone, S., Lucas, J. A. and Hammond-Kosack, K. E. 2004. Induction of infection plaques in Oculimacula spp. the cereal eyespot fungi. Abstracts 7th European Conference on Fungal Genetics, Copenhagen, 17-20 April 2004 .

Exploiting Triticum monococcum as a source of disease resistance traits to important UK fungal and viral pathogens

C2 - Non-edited contributions to conferences

Kornyukhin, D., Kanyuka, K., Lovell, D. J., Maguire, K., West, J. S., Mitrofanova, O. P. and Hammond-Kosack, K. E. 2004. Exploiting Triticum monococcum as a source of disease resistance traits to important UK fungal and viral pathogens. Abstracts Discovery, Development and Delivery in Plant Pathology: 7th Conference of the European Foundation for Plant Pathology and BSPP Presidential Meeting 2004, Aberdeen, 5-10 September 2004 . pp. 54

Vacuolar sulfate transporters are essential determinants controlling internal distribution of sulfate in Arabidopsis

A - Papers appearing in refereed journals

Kataoka, T., Watanabe-Takahashi, A., Hayashi, N., Ohnishi, M., Mimura, T., Buchner, P. H., Hawkesford, M. J., Yamaya, T. and Takahashi, H. 2004. Vacuolar sulfate transporters are essential determinants controlling internal distribution of sulfate in Arabidopsis. The Plant Cell. 16, pp. 2693-2704.

Plant pathogens: how can molecular genetic information on plant pathogens assist in breeding disease resistant crops

C1 - Edited contributions to conferences/learned societies

Hammond-Kosack, K. E., Urban, M., Baldwin, T., Daudi, A., Rudd, J. J., Keon, J., Lucas, J. A., Magiure, K., Kornyukhin, D., Jing, H-C., Bass, C. G. and Antoniw, J. F. 2004. Plant pathogens: how can molecular genetic information on plant pathogens assist in breeding disease resistant crops. Fischer, T. (ed.) New Directions for a Diverse Planet: Proceedings 4th International Crop Science Congress, Brisbane, 26 September-1 October 2004 . Regional Institute, Gosford. pp. www.cropscience.org.au

A controlled environment test for resistance to Soil-borne cereal mosaic virus (SBCMV) and its use to determine the mode of inheritance of resistance in wheat cv. Cadenza and for screening Triticum monococcum genotypes for sources of SBCMV resistance

A - Papers appearing in refereed journals

Kanyuka, K., Lovell, D. J., Mitrofanova, O. P., Hammond-Kosack, K. E. and Adams, M. J. 2004. A controlled environment test for resistance to Soil-borne cereal mosaic virus (SBCMV) and its use to determine the mode of inheritance of resistance in wheat cv. Cadenza and for screening Triticum monococcum genotypes for sources of SBCMV resistance. Plant Pathology. 53 (2), pp. 154-160. https://doi.org/10.1111/j.1365-3059.2004.01000.x

Coordinated expression of sulfate uptake and components of the sulfate assimilatory pathway in maize

A - Papers appearing in refereed journals

Hopkins, L., Parmar, S., Bouranis, D., Howarth, J. R. and Hawkesford, M. J. 2004. Coordinated expression of sulfate uptake and components of the sulfate assimilatory pathway in maize. Plant Biology. 6 (4), pp. 408-414. https://doi.org/10.1055/s-2004-820872

Phylogeny and expression of paralogous and orthologous sulphate transporter genes in diploid and hexaploid wheats

A - Papers appearing in refereed journals

Buchner, P. H., Prosser, I. M. and Hawkesford, M. J. 2004. Phylogeny and expression of paralogous and orthologous sulphate transporter genes in diploid and hexaploid wheats. Genome. 47, pp. 526-534.

Plant sulphate transporters: co-ordination of uptake, intracellular and long-distance transport

A - Papers appearing in refereed journals

Buchner, P. H., Takahashi, H. and Hawkesford, M. J. 2004. Plant sulphate transporters: co-ordination of uptake, intracellular and long-distance transport. Journal of Experimental Botany. 55, pp. 1765-1773.

Genomics and the Rothamsted Classical Experiments

G - Articles in popular magazines and other technical publications

Hawkesford, M. J., Barraclough, P. B., Howarth, J. R., Lu, C. and Edwards, K. J. 2003. Genomics and the Rothamsted Classical Experiments. Rothamsted Research Annual Report. 2002-2003, pp. 36-39.

Regulation of infection plaque formation in Tapesia spp. the cereal eyespot fungi

C2 - Non-edited contributions to conferences

Maguire, K., Dickinson, M., Bowyer, P., Lucas, J. A. and Hammond-Kosack, K. E. 2003. Regulation of infection plaque formation in Tapesia spp. the cereal eyespot fungi. Abstracts BSPP Presidential Meeting 2003: Plant Pathogen Genomics - from Sequence to Application, Nottingham, 15-18 December 2003 . pp. 42-43

Sulphate uptake and transport

B - Book chapters etc edited externally

Hawkesford, M. J., Buchner, P. H., Hopkins, L. and Howarth, J. R. 2003. Sulphate uptake and transport. in: Ahmad, A. and Abrol, Y. P. (ed.) Sulphur in plants Kluwer Academic Publishers, Dordrecht, Netherlands. pp. 71-86

Microarray analysis of wheat endosperm transcriptome - the effect of nitrogen supply

C2 - Non-edited contributions to conferences

Lu, C., Edwards, K. J., Wilson, I., Barker, G., Coghill, J. and Hawkesford, M. J. 2003. Microarray analysis of wheat endosperm transcriptome - the effect of nitrogen supply.

The Fusarium graminearum MAP1 gene is essential for pathogenicity and development of perithecia

A - Papers appearing in refereed journals

Urban, M., Mott, E., Farley, T. and Hammond-Kosack, K. E. 2003. The Fusarium graminearum MAP1 gene is essential for pathogenicity and development of perithecia. Molecular Plant Pathology. 4 (5), pp. 347-359. https://doi.org/10.1046/J.1364-3703.2003.00183.X

Transporter gene families in plants: the sulphate transporter gene family - redundancy or specialization

A - Papers appearing in refereed journals

Hawkesford, M. J. 2003. Transporter gene families in plants: the sulphate transporter gene family - redundancy or specialization. Physiologia Plantarum. 117 (2), pp. 155-163. https://doi.org/10.1034/j.1399-3054.2003.00034.x

Aerenchyma formulation in roots of maize during sulphate starvation

A - Papers appearing in refereed journals

Bouranis, D. L., Chorianopoulou, S. N., Siyannis, V. F., Protonotarios, V. E. and Hawkesford, M. J. 2003. Aerenchyma formulation in roots of maize during sulphate starvation. Planta. 217 (3), pp. 382-391. https://doi.org/10.1007/s00425-003-1007-6

Leaf responses of young iron-inefficient maize plants to sulfur deprivation

A - Papers appearing in refereed journals

Bouranis, D. L., Chorianopoulou, S. N., Protonotarios, V. E., Siyannis, V. F., Hopkins, L. and Hawkesford, M. J. 2003. Leaf responses of young iron-inefficient maize plants to sulfur deprivation. Journal of Plant Nutrition. 26, pp. 1189-1202.

Cloning of two contrasting high-affinity sulfate transporters from tomato induced by low sulfate and infection by the vascular pathogen Verticillium dahliae

A - Papers appearing in refereed journals

Howarth, J. R., Fourcroy, P., Davidian, J-C., Smith, F. W. and Hawkesford, M. J. 2003. Cloning of two contrasting high-affinity sulfate transporters from tomato induced by low sulfate and infection by the vascular pathogen Verticillium dahliae. Planta. 218, pp. 58-64.

p -Coumaroylnoradrenaline, a novel plant metabolite implicated in tomato defense against pathogens

A - Papers appearing in refereed journals

Von Roepenack-Lahaye, E., Newman, M-A., Schornack, S., Hammond-Kosack, K. E., Lahaye, T., Jones, J. D. G., Daniels, M. J. and Dow, J. M. 2003. p -Coumaroylnoradrenaline, a novel plant metabolite implicated in tomato defense against pathogens. Journal of Biological Chemistry. 278, pp. 43373-43383.

Sufur transport and assimilation in plants: regulation, interaction and signaling

E - Books edited/written by staff member, alone/with others

Davidian, J-C., Grill, D., De Kok, L. J., Stulen, I., Hawkesford, M. J. and Schnug, E. Rennenberg, H. (ed.) 2003. Sufur transport and assimilation in plants: regulation, interaction and signaling. Backhuys Publishers, Leiden Netherlands.

Deciphering plant-pathogen communication: fresh perspectives for molecular resistance breeding

A - Papers appearing in refereed journals

Hammond-Kosack, K. E. and Parker, J. E. 2003. Deciphering plant-pathogen communication: fresh perspectives for molecular resistance breeding. Current Opinion in Biotechnology. 14, pp. 177-193.

Identifying pathogenicity genes and developing tools to monitor trichothecene mycotoxin production in Fusarium graminearum and F. culmorum

C2 - Non-edited contributions to conferences

Daudi, A., Urban, M. and Hammond-Kosack, K. E. 2003. Identifying pathogenicity genes and developing tools to monitor trichothecene mycotoxin production in Fusarium graminearum and F. culmorum. Abstracts SCI Student Conference on Advances in Fungal Control Strategies, Bracknell, 29 April 2003 .

Evaluation of critical phases of sulphur supply for optimum yield and quality of wheat (H-GCA Project Report 272)

D1 - Technical reports: non-confidential

Hawkesford, M. J., Palmer, R. V., Zhao, F-J. and McGrath, S. P. 2002. Evaluation of critical phases of sulphur supply for optimum yield and quality of wheat (H-GCA Project Report 272). Home Grown Cereals Authority (HGCA) London.

Elemental sulfur and thiol accumulation in tomato and defense against a fungal vascular pathogen

A - Papers appearing in refereed journals

Williams, J. S., Hall, S. A., Hawkesford, M. J., Beale, M. H. and Cooper, R. M. 2002. Elemental sulfur and thiol accumulation in tomato and defense against a fungal vascular pathogen. Plant Physiology. 128, pp. 150-159.

Modulation of cyanoalanine sythase and O -acetylserine (thiol) lyases A and B activity by beta-substituted alanyl and anion inhibitors

A - Papers appearing in refereed journals

Warrilow, A. G. S. and Hawkesford, M. J. 2002. Modulation of cyanoalanine sythase and O -acetylserine (thiol) lyases A and B activity by beta-substituted alanyl and anion inhibitors. Journal of Experimental Botany. 53, pp. 439-445.

Biochemical analysis of transgenic tobacco lines producing bacterial serine acetyltransferase

A - Papers appearing in refereed journals

Blaszczyk, A., Sirko, L., Hawkesford, M. J. and Sirko, A. 2002. Biochemical analysis of transgenic tobacco lines producing bacterial serine acetyltransferase. Plant Science. 162, pp. 589-597.

Arabidopsis is susceptible to the cereal ear blight fungal pathogens Fusarium graminearum and Fusarium culmorum

A - Papers appearing in refereed journals

Urban, M., Daniels, S., Mott, E. and Hammond-Kosack, K. E. 2002. Arabidopsis is susceptible to the cereal ear blight fungal pathogens Fusarium graminearum and Fusarium culmorum. The Plant Journal. 32 (6), pp. 961-973. https://doi.org/10.1046/j.1365-313X.2002.01480.x

Influence of iron status on cadmium and zinc uptake by different ecotypes of the hyperaccumulator Thlaspi caerulescens

A - Papers appearing in refereed journals

Lombi, E., Tearall, K. L., Howarth, J. R., Zhao, F-J., Hawkesford, M. J. and McGrath, S. P. 2002. Influence of iron status on cadmium and zinc uptake by different ecotypes of the hyperaccumulator Thlaspi caerulescens. Plant Physiology. 128 (4), pp. 1359-1367. https://doi.org/10.1104/pp.010731

Identification of genes involved in cadmium hyper-accumulation in a higher plant, Thlaspi caerulescens

C2 - Non-edited contributions to conferences

Tearall, K. L., Howarth, J. R., Zhao, F-J., McGrath, S. P. and Hawkesford, M. J. 2001. Identification of genes involved in cadmium hyper-accumulation in a higher plant, Thlaspi caerulescens. Abstracts SEB Annual Meeting, Canterbury, 2-6 April 2001 . pp. c1.120

Introduction: the molecular analysis of plant adaptation to the environment

B - Book chapters etc edited externally

Hawkesford, M. J. 2001. Introduction: the molecular analysis of plant adaptation to the environment. in: Hawkesford, M. J. and Buchner, P. H. (ed.) Molecular analysis of plant adaptation to the environment Kluwer Academic Publishers, Dordrecht, Netherlands. pp. 1-15

Sulphur supply and the optimisation of the yield of wheat

C2 - Non-edited contributions to conferences

Palmer, R. V., Zhao, F-J., McGrath, S. P. and Hawkesford, M. J. 2001. Sulphur supply and the optimisation of the yield of wheat. Abstracts 14th International Plant Nutrition Colloquium, Hannover, 27 July-3 August 2001 .

Using plant analysis to predict yield losses caused by sulphur deficiency

A - Papers appearing in refereed journals

Blake-Kalff, M. M. A., Zhao, F-J., Hawkesford, M. J. and McGrath, S. P. 2001. Using plant analysis to predict yield losses caused by sulphur deficiency. Annals of Applied Biology - AAB. 138 (1), pp. 123-127. https://doi.org/10.1111/j.1744-7348.2001.tb00093.x

Diagnosing sulphur deficiency in field-grown oilseed rape (Brassica napus L.) and wheat (Triticum aestivum L.)

A - Papers appearing in refereed journals

Blake-Kalff, M. M. A., Hawkesford, M. J., Zhao, F-J. and McGrath, S. P. 2000. Diagnosing sulphur deficiency in field-grown oilseed rape (Brassica napus L.) and wheat (Triticum aestivum L.). Plant and Soil. 225 (1), pp. 95-107. https://doi.org/10.1023/A:1026503812267

Sulphur deficiency - advances in diagnosis

C2 - Non-edited contributions to conferences

Blake-Kalff, M. M. A., Hawkesford, M. J., Zhao, F-J. and McGrath, S. P. 2000. Sulphur deficiency - advances in diagnosis. Abstracts SCI Meeting, London, October 2000 .

Sulphur uptake and utilization by crops

C2 - Non-edited contributions to conferences

Blake-Kalff, M. M. A., Riley, N., Hawkesford, M. J., Zhao, F-J. and McGrath, S. P. 2000. Sulphur uptake and utilization by crops. Abstracts AAB Meeting on Resource Allocation in Crop Plants, Aberystwyth, 11-13 September 2000 .

Diagnosis of sulphur deficiency in oilseed rape and wheat (HGCA Project Report No. 217)

D1 - Technical reports: non-confidential

Blake-Kalff, M. M. A., Zhao, F-J., Hawkesford, M. J. and McGrath, S. P. 2000. Diagnosis of sulphur deficiency in oilseed rape and wheat (HGCA Project Report No. 217). Home Grown Cereals Authority (HGCA) London.

S-supply, free sulfur and free amino acid pools in potato (Solanum tuberosum L. cv Desiree)

B - Book chapters etc edited externally

Hopkins, L. and Hawkesford, M. J. 2000. S-supply, free sulfur and free amino acid pools in potato (Solanum tuberosum L. cv Desiree). in: Brunold, C. (ed.) Sulfur nutrition and sulfur assimilation in higher plants Paul Haupt, Bern. pp. 259-261

The plant sulfate transporter family - an update

C2 - Non-edited contributions to conferences

Hawkesford, M. J., Buchner, P. H., Hopkins, L., Howarth, J., Jacobs, N., Palmer, R., Parmar, S. and Prosser, I. 2000. The plant sulfate transporter family - an update. Abstracts Society for Experimental Biology Plant Transport Group Meeting, Hatfield, 6-9 September 2000 .

Cloning genes involved in sulfur uptake and metabolism using subtractive library and PCR-based techniques

C2 - Non-edited contributions to conferences

Howarth, J. R. and Hawkesford, M. J. 2000. Cloning genes involved in sulfur uptake and metabolism using subtractive library and PCR-based techniques. Abstracts COST Action 829 Meeting, Graz, Austria, 1-3 September 2000 .

Cysteine synthase (O -acetylserine (thiol) lyase) substrate specificities classify the mitochondrial isoform as a cyanalanine synthase

A - Papers appearing in refereed journals

Warrilow, A. G. S. and Hawkesford, M. J. 2000. Cysteine synthase (O -acetylserine (thiol) lyase) substrate specificities classify the mitochondrial isoform as a cyanalanine synthase. Journal of Experimental Botany. 51, pp. 985-993.

Molecular mechanisms of phosphate and sulphate transport in plants

A - Papers appearing in refereed journals

Smith, F. W., Rae, A. L. and Hawkesford, M. J. 2000. Molecular mechanisms of phosphate and sulphate transport in plants. Biochimica et Biophysica Acta (BBA) - Biomembranes. 1465 (1-2), pp. 236-245. https://doi.org/10.1016/S0005-2736(00)00141-3

Genomic and functional characterisation of the oas gene family encoding O -acetylserine (thiol) lyases, enzymes catalyzing the final step in cysteine biosynthesis in Arabidopsis thaliana

A - Papers appearing in refereed journals

Jost, R., Berkowitz, O., Wirtz, M., Hopkins, L., Hawkesford, M. J. and Hell, R. 2000. Genomic and functional characterisation of the oas gene family encoding O -acetylserine (thiol) lyases, enzymes catalyzing the final step in cysteine biosynthesis in Arabidopsis thaliana. Gene. 253, pp. 237-247.

Control of sulphate transporter expression in Solanum tuberosum L. cv Desiree overexpressing bacterial serine acetyltransferase

C2 - Non-edited contributions to conferences

Hopkins, L., Blaszczyk, A., Hesse, H. and Hawkesford, M. J. 2000. Control of sulphate transporter expression in Solanum tuberosum L. cv Desiree overexpressing bacterial serine acetyltransferase. Abstracts Society for Experimental Biology Plant Transport Group Meeting, Hatfield, 6-9 September 2000 .

Molecular genetics of sulphate assimilation

B - Book chapters etc edited externally

Hawkesford, M. J. and Wray, J. L. 2000. Molecular genetics of sulphate assimilation. in: Callow, J. A. (ed.) Advances in Botanical Research, Vol.33 Elsevier.

Comparative expression analysis of high affinity "root" group sulphate transporters in wheat, rape and tomato

C2 - Non-edited contributions to conferences

Buchner, P. H., Howarth, J., Parmar, S. and Hawkesford, M. J. 2000. Comparative expression analysis of high affinity "root" group sulphate transporters in wheat, rape and tomato. Abstracts Society for Experimental Biology Plant Transport Group Meeting, Hatfield, 6-9 September 2000 .

The roles of three functional sulphate transporters involved in uptake and translocation of sulphate in Arabidopsis thaliana

A - Papers appearing in refereed journals

Takahashi, H., Watanabe-Takahashi, A., Smith, F. W., Blake-Kalff, M. M. A., Hawkesford, M. J. and Saito, K. 2000. The roles of three functional sulphate transporters involved in uptake and translocation of sulphate in Arabidopsis thaliana. The Plant Journal. 23 (2), pp. 171-182. https://doi.org/10.1046/j.1365-313x.2000.00768.x

Plant responses to sulphur deficiency and the genetic manipulation of sulphate transporters to improve S-utilization efficiency

A - Papers appearing in refereed journals

Hawkesford, M. J. 2000. Plant responses to sulphur deficiency and the genetic manipulation of sulphate transporters to improve S-utilization efficiency. Journal of Experimental Botany. 51, pp. 131-138.

Patterns of sulphur allocation in rape and wheat

C2 - Non-edited contributions to conferences

Blake-Kalff, M. M. A., Young, M. E., Zhao, F-J., Hawkesford, M. J. and McGrath, S. P. 1999. Patterns of sulphur allocation in rape and wheat. Abstracts COST Workshop, Naples, 8-9 January 1999 .

Cloning and expression of sulfate transporters in wheat

C2 - Non-edited contributions to conferences

Buchner, P. H., Prosser, I. M. and Hawkesford, M. J. 1999. Cloning and expression of sulfate transporters in wheat. Abstracts Society for Experimental Biology Plant Transport Group Meeting, Southampton, 8-10 September 1999 .

The plant sulfate transporter family

C2 - Non-edited contributions to conferences

Hawkesford, M. J. and Prosser, I. M. 1999. The plant sulfate transporter family. Abstracts Society for Experimental Biology Plant Transport Group Meeting, Southampton, 8-10 September 1999 .

Sulphur utilisation efficiency in oilseed rape

C1 - Edited contributions to conferences/learned societies

Zhao, F-J., Blake-Kalff, M. M. A., Riley, N., Hawkesford, M. J. and McGrath, S. P. 1999. Sulphur utilisation efficiency in oilseed rape. Wratten, N. and Salisbury, P. A. (ed.) Proceedings 10th International Rapeseed Congress: New Horizons for an Old Crop, Canberra, September 1999 . pp. 1-6

Sulphur assimilation and effects on yield and quality of wheat

A - Papers appearing in refereed journals

Zhao, F-J., Hawkesford, M. J. and McGrath, S. P. 1999. Sulphur assimilation and effects on yield and quality of wheat. Journal of Cereal Science. 30 (1), pp. 1-17. https://doi.org/10.1006/jcrs.1998.0241

Allocation of sulphur within oilseed rape leaves and the effect of sulphur deficiency

C2 - Non-edited contributions to conferences

Blake-Kalff, M. M. A., Hawkesford, M. J., Zhao, F-J. and McGrath, S. P. 1998. Allocation of sulphur within oilseed rape leaves and the effect of sulphur deficiency. Abstracts Rank Prize Fund Conference, Grasmere, July 1998 .

Distribution of sulfur within oilseed rape leaves in response to sulfur deficiency during vegetative growth

A - Papers appearing in refereed journals

Blake-Kalff, M. M. A., Harrison, K. R., Hawkesford, M. J., Zhao, F-J. and McGrath, S. P. 1998. Distribution of sulfur within oilseed rape leaves in response to sulfur deficiency during vegetative growth. Plant Physiology. 118 (4), pp. 1337-1344. https://doi.org/10.1104/pp.118.4.1337

Sulphur nutrition and glutathione content of wheat

C2 - Non-edited contributions to conferences

Young, M. E., Grundy, N. M., Zhao, F-J., McGrath, S. P. and Hawkesford, M. J. 1998. Sulphur nutrition and glutathione content of wheat. Oxford University Press (OUP) Oxford.

The effect of sulphur-deficiency on the concentrations and distribution of glutathione and sulphate in oilseed rape

C2 - Non-edited contributions to conferences

Blake-Kalff, M. M. A., Harrison, K. R., Hawkesford, M. J., Zhao, F-J. and McGrath, S. P. 1998. The effect of sulphur-deficiency on the concentrations and distribution of glutathione and sulphate in oilseed rape. Oxford University Press (OUP) Oxford.

SO42- Deprivation Has an Early Effect on the Content of Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase and Photosynthesis in Young Leaves of Wheat

A - Papers appearing in refereed journals

Gilbert, S. M., Clarkson, D. T., Cambridge, M., Lambers, H. and Hawkesford, M. J. 1997. SO42- Deprivation Has an Early Effect on the Content of Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase and Photosynthesis in Young Leaves of Wheat. Plant Physiology. 115 (3), pp. 1231-1239. https://doi.org/10.1104/pp.115.3.1231

Diagnosis of sulphur deficiency in wheat

B - Book chapters etc edited externally

Zhao, F-J., Hawkesford, M. J., Warrilow, A. G. S., McGrath, S. P. and Clarkson, D. T. 1997. Diagnosis of sulphur deficiency in wheat. in: Cram, W. J. and Dekok, L. J. (ed.) Sulphur metabolism in higher plants Backhuys Publishers, Leiden Netherlands. pp. 349-351

Responses of two wheat varieties to sulphur addition and diagnosis of sulphur deficiency

A - Papers appearing in refereed journals

Zhao, F-J., Hawkesford, M. J., Warrilow, A. G. S., McGrath, S. P. and Clarkson, D. T. 1996. Responses of two wheat varieties to sulphur addition and diagnosis of sulphur deficiency. Plant and Soil. 181 (2), pp. 317-327. https://doi.org/10.1007/BF00012066

Plant members of a family of sulfate transporters reveal functional subtypes

A - Papers appearing in refereed journals

Smith, F. W., Ealing, P. M., Hawkesford, M. J. and Clarkson, D. T. 1995. Plant members of a family of sulfate transporters reveal functional subtypes. Proceedings of the National Academy of Sciences. 92 (20), pp. 9373-9377. https://doi.org/10.1073/pnas.92.20.9373