Molecular genetic analyses of resistance to Soil-borne cereal mosaic virus (SBCMV) in bread wheat

Bass, C. G., Hendley, R., Adams, M. J., Hammond-Kosack, K. E. and Kanyuka, K. 2005. Molecular genetic analyses of resistance to Soil-borne cereal mosaic virus (SBCMV) in bread wheat. Abstracts 10th Conference on Viral Diseases of Gramineae in Europe, Lovain-la-Neuve, 12-14 September 2005 .

Related outputs

A conserved fungal Knr4/Smi1 protein is vital for maintaining cell wall integrity and host plant pathogenesis

A - Papers appearing in refereed journals

Kroll, E., Bayon, C., Rudd, J. J., Armer, V., Magaji-Umashankar, A., Ames, R., Urban, M., Brown, N. A. and Hammond-Kosack, K. E. 2025. A conserved fungal Knr4/Smi1 protein is vital for maintaining cell wall integrity and host plant pathogenesis . PLOS Pathogens. 21 (1), p. e1012769. https://doi.org/10.1371/journal.ppat.1012769

Identifying the Fusarium effector proteases that play a role in pathogenesis in wheat

A - Papers appearing in refereed journals

Srivastava, M., Kroll, E., Darino, M., Smith, D., Urban, M. and Hammond-Kosack, K. E. 2024. Identifying the Fusarium effector proteases that play a role in pathogenesis in wheat. Molecular Plant-Microbe Interactions - MPMI. 37 (5 supplement), p. S1.24. https://doi.org/10.1094/MPMI-37-5-S1.1

Exploring the function of two paralogous F. graminearum effectors reveals an alternative genetic pathway required for virulence on wheat spikes.

A - Papers appearing in refereed journals

Hammond-Kosack, K. E., Rudd, J. J. and Kanja, C. 2024. Exploring the function of two paralogous F. graminearum effectors reveals an alternative genetic pathway required for virulence on wheat spikes. Molecular Plant-Microbe Interactions - MPMI. 37 (5 supplement), p. S1.65. https://doi.org/10.1094/MPMI-37-5-S1.1

A Fusarium graminearum trichothecene mycotoxin facilitates plasmodesmatal crossings by hyphae during wheat infection.

A - Papers appearing in refereed journals

Armer, V., Deeks, M. J. and Hammond-Kosack, K. E. 2024. A Fusarium graminearum trichothecene mycotoxin facilitates plasmodesmatal crossings by hyphae during wheat infection. Molecular Plant-Microbe Interactions - MPMI. 37 (5 supplement), p. S1.138. https://doi.org/10.1094/MPMI-37-5-S1.118

PHI-base - The multi-species Pathogen-Host Interaction Database in 2025

A - Papers appearing in refereed journals

Urban, M., Cuzick, A., Seager, J., Nonavinakere, N., Sahu, J., Sahu, P., Iyer, V. L., Khamari, L., Martinez, M. C. and Hammond-Kosack, K. E. 2024. PHI-base - The multi-species Pathogen-Host Interaction Database in 2025. Nucleic Acids Research. https://doi.org/10.1093/nar/gkae1084

An array of Zymoseptoria tritici effectors suppress plant immune responses

A - Papers appearing in refereed journals

Thynne, E., Ali, H., Seong, K., Abukhalaf, M., Guerreiro, M. A., Flores-Nunez, V. M., Hansen, R., Bergues, A., Salman, M. J., Rudd, J. J., Kanyuka, K., Tholey, A., Krasileva, K. V., Kettles, G. J. and Stukenbrock, E. H. 2024. An array of Zymoseptoria tritici effectors suppress plant immune responses. Molecular Plant Pathology. 25 (10), p. e13500. https://doi.org/10.1111/mpp.13500

Data from: A conserved fungal Knr4/Smi1 protein is vital for maintaining cell wall integrity and host plant pathogenesis

N - Datasets

Kroll, E., Bayon, C., Rudd, J. J., Armer, V., Magaji-Umashankar, A., Ames, R., Urban, M., Brown, N. A. and Hammond-Kosack, K. E. 2024. Data from: A conserved fungal Knr4/Smi1 protein is vital for maintaining cell wall integrity and host plant pathogenesis. Rothamsted Research. https://doi.org/10.23637/rothamsted.99163

Navigating the Fusarium species complex: Host-range plasticity and genome variations

A - Papers appearing in refereed journals

Armer, V., Kroll, E., Darino, M., Smith, D., Urban, M. and Hammond-Kosack, K. E. 2024. Navigating the Fusarium species complex: Host-range plasticity and genome variations. Fungal Biology. 128 (8B), pp. 2439-2459. https://doi.org/10.1016/j.funbio.2024.07.004

A fungal endophyte induces local cell wall-mediated resistance in wheat roots against take-all disease

A - Papers appearing in refereed journals

Chancellor, T., Smith, D. P., Chen, W., Clark, S. J., Venter, E., Halsey, K., Carrera, E., Mcmillan, V. E., Canning, G., Armer, V., Hammond-Kosack, K. E. and Palma-Guerrero, J. 2024. A fungal endophyte induces local cell wall-mediated resistance in wheat roots against take-all disease. Frontiers in Plant Science. 15, p. 1444271. https://doi.org/10.3389/fpls.2024.1444271

The trichothecene mycotoxin deoxynivalenol facilitates cell-to-cell invasion during wheat-tissue colonisation by Fusarium graminearum

A - Papers appearing in refereed journals

Armer, V., Urban, M., Ashfield, T., Deeks, M. J. and Hammond-Kosack, K. E. 2024. The trichothecene mycotoxin deoxynivalenol facilitates cell-to-cell invasion during wheat-tissue colonisation by Fusarium graminearum. Molecular Plant Pathology. 25 (6), p. e13485. https://doi.org/10.1111/mpp.13485

Down-regulation of wheat Rubisco activase isoforms expression by virus-induced gene silencing

A - Papers appearing in refereed journals

Perdomo, J. A., Scales, J. C., Lee, W., Kanyuka, K. and Carmo-Silva, E. 2024. Down-regulation of wheat Rubisco activase isoforms expression by virus-induced gene silencing. Plant Direct. 8 (4), p. e583. https://doi.org/10.1002/pld3.583

Feeling the Heat: Investigating the dual assault of Zymoseptoria tritici and Heat Stress on Wheat (Triticum aestivum)

Conference poster

Blyth, H. R., Zarsav, A., Smith, D., Kanyuka, K., Hassall, K. L., Michaelson, L. V., Rudd, J. J. and Haslam, R. P. 2024. Feeling the Heat: Investigating the dual assault of Zymoseptoria tritici and Heat Stress on Wheat (Triticum aestivum) . 32nd Fungal Genetics Conference. Asilomar Conference Grounds, Pacific Grove, CA 12 Mar 2024

Identification and functional characterisation of a locus for target site integration in Fusarium graminearum

A - Papers appearing in refereed journals

Darino, M., Urban, M., Kaur, N., Wood, A. K. M., Smith, D., Grimwade-Mann, M., Beacham, A. and Hammond-Kosack, K. E. 2024. Identification and functional characterisation of a locus for target site integration in Fusarium graminearum. Fungal Biology and Biotechnology. 11 (2), pp. 1-21. https://doi.org/10.1186/s40694-024-00171-8

Characterising the Influence of First-Year Wheat Cultivar on Pseudomonas Selection and Function in a Take-All Infected Field

A - Papers appearing in refereed journals

Zadjali, M. A., Rabiey, M., Mcmillan, V. E., Shaw, L. J., Hammond-Kosack, K. E., Malone, J. G., Mauchline, T. H. and Jackson, R. W. 2023. Characterising the Influence of First-Year Wheat Cultivar on Pseudomonas Selection and Function in a Take-All Infected Field. Crops. 3 (3), pp. 195-208. https://doi.org/10.3390/crops3030019

Fungal plant pathogen "mutagenomics" reveals tagged and untagged mutations in Zymoseptoria tritici and identifies SSK2 as key morphogenesis and stress-responsive virulence factor

A - Papers appearing in refereed journals

Blyth, H., Smith, D., King, R., Bayon, C., Ashfield, T., Walpole, H., Venter, E., Kanyuka, K. and Rudd, J. J. 2023. Fungal plant pathogen "mutagenomics" reveals tagged and untagged mutations in Zymoseptoria tritici and identifies SSK2 as key morphogenesis and stress-responsive virulence factor. Frontiers in Plant Science. 14, p. 1140824. https://doi.org/10.3389/fpls.2023.1140824

Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen

A - Papers appearing in refereed journals

Chen, H., King, R., Smith, D., Bayon, C., Ashfield, T., Torriani, S., Kanyuka, K., Hammond-Kosack, K. E., Bieri, S. and Rudd, J. J. 2023. Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen. BMC Biology. 21, p. 24. https://doi.org/10.1186/s12915-023-01520-6

A framework for community curation of interspecies interactions literature

A - Papers appearing in refereed journals

Cuzick, A., Seager, J., Wood, V., Urban, M., Rutherford, K. and Hammond-Kosack, K. E. 2023. A framework for community curation of interspecies interactions literature. eLife. 12, p. e84658. https://doi.org/10.7554/eLife.84658

Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen

N - Datasets

Chen, H., King, R., Smith, D., Bayon, C., Ashfield, T., Torriani, S., Kanyuka, K., Hammond-Kosack, K. E., Bieri, S. and Rudd, J. J. 2022. Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen. Rothamsted Research. https://doi.org/10.23637/rothamsted.98q90

Induction of distinct plant cell death programs by secreted proteins from the wheat pathogen Zymoseptoria tritici

A - Papers appearing in refereed journals

Welch, T., Bayon, C., Rudd, J. J., Kanyuka, K. and Kettles, G. J. 2022. Induction of distinct plant cell death programs by secreted proteins from the wheat pathogen Zymoseptoria tritici. Scientific Reports. 12, p. 17880. https://doi.org/10.1038/s41598-022-22660-9

A large bioassay identifies Stb resistance genes that provide broad resistance against Septoria tritici blotch Disease in the UK

A - Papers appearing in refereed journals

Tidd, H., Rudd, J. J., Ray, R. V., Bryant, R. and Kanyuka, K. 2022. A large bioassay identifies Stb resistance genes that provide broad resistance against Septoria tritici blotch Disease in the UK. Frontiers in Plant Science. 13, p. 1070986. https://doi.org/10.3389/fpls.2022.1070986

Apoplastic and vascular defences

A - Papers appearing in refereed journals

Darino, M., Kanyuka, K. and Hammond-Kosack, K. E. 2022. Apoplastic and vascular defences. Essays in Biochemistry. 66 (5), pp. 595-605. https://doi.org/10.1042/EBC20220159

Development of Plant-Based Vaccines for Prevention of Avian Influenza and Newcastle Disease in Poultry.

A - Papers appearing in refereed journals

Nurzijah, I., Elbohy, O. A., Kanyuka, K., Daly, J. M. and Dunham, S. 2022. Development of Plant-Based Vaccines for Prevention of Avian Influenza and Newcastle Disease in Poultry. Vaccines. 10 (3), p. 478. https://doi.org/10.3390/vaccines10030478

FANCM promotes class I interfering crossovers and suppresses class II non-interfering crossovers in wheat meiosis

A - Papers appearing in refereed journals

Desjardins, D. S., Simmonds, J., Guterman, I., Kanyuka, K., Burridge, A. J., Tock, A. J., Sanchez-Moran, E., Franklin, F. C. H., Henderson, I. R., Edwards, K. J., Uauy, C. and Higgins, J. D. 2022. FANCM promotes class I interfering crossovers and suppresses class II non-interfering crossovers in wheat meiosis. Nature Communications. 13, p. 3644. https://doi.org/10.1038/s41467-022-31438-6

Ensembl Genomes 2022: an expanding genome resource for non-vertebrates

A - Papers appearing in refereed journals

Yates, A. D., Allen, J., Amode, R. M., Azov, A. G., Barba, M., Becerra, A., Bhai, J., Campbell, L. I., Carbajo Martinez, M., Chakiachvili, M, Chougule, K., Christensen, M., Contreras-Moreira, B., Cuzick, A., Fioretto, L. D. R., Davis, P., Silva, N. H. D., Diamantakis, S., Dyer, S., Elser, J., Filippi, C. V., Gall, A., Grigoriadis, D., Guijarro-Clarke, C., Gupta, P., Hammond-Kosack, K. E., Howe, K. L., Jaiswal, P., Kaikala, V., Kumar, V., Kumari, S., Langridge, N., Le, T., Luypaert, M., Maslen, G. L., Maurel, T., Moore, B., Muffato, M., Mushtaq, A., Naamati, G., Naithani, S., Olson, A., Parker, A., Paulini, M., Pedro, H., Perry, E., Preece, J., Quinton-Tulloch, M., Rodgers, F., Rosello, M., Ruffier, M., Seager, J., Sitnik, V., Szpak, M., Tate, J., Tello-Ruiz, M. K., Trevanion, S. J., Urban, M., Ware, D., Wei, S., Williams, G., Winterbottom, A., Zarowiecki, M., Finn, R. D. and Flicek, P. 2022. Ensembl Genomes 2022: an expanding genome resource for non-vertebrates. Nucleic Acids Research. 50 (D1), pp. D996-D1003. https://doi.org/10.1093/nar/gkab1007

Virus-mediated protein overexpression (VOX) in monocots to identify and functionally characterize fungal effectors

B - Book chapters etc edited externally

Kanyuka, K. 2022. Virus-mediated protein overexpression (VOX) in monocots to identify and functionally characterize fungal effectors. in: Kufer, T. and Kaparakis-Liaskos, M. (ed.) Effector-triggered immunity Humana Press Inc. pp. 2523 p 93–112

Virus-induced gene silencing in wheat and related monocot species

B - Book chapters etc edited externally

Panwar, V. and Kanyuka, K. 2022. Virus-induced gene silencing in wheat and related monocot species. in: Mysore, K. S. and Senthil-Kumar, M. (ed.) Plant Gene Silencing Humana Press Inc.

Phylogenomic analysis of a 55.1-kb 19-gene dataset resolves a monophyletic Fusarium that includes the Fusarium solani species complex.

A - Papers appearing in refereed journals

Geiser, D. M., Al-Hatmi, A. M. S., Aoki, T., Arie, T., Balmas, V., Barnes, I., Bergstrom, G. C., Bhattacharyya, M. K., Blomquist, C. L., Bowden, R. L., Brankovics, B., Brown, D. W., Burgess, L. W., Bushley, K., Busman, M., Cano-Lira, J. F., Carrillo, J. D., Chang, H., Chen, C., Chen, W., Chilvers, M., Chulze, S., Coleman, J. J., Cuomo, C. A., De Beer, Z. W., De Hoog, G. S., Del Castillo-Munera, J., Del Ponte, E. M., Dieguez-Uribeondo, J., Di Pietro, A., Edel-Hermann, V., Elmer, W. H., Epstein, L., Eskalen, A., Esposto, M. C., Everts, K. L., Fernandez-Pavía, S. P., Ferreira-Da-Silva, G., Foroud, N. A., Fourie, G., Frandsen, R. J. N., Freeman, S., Freitag, M., Frenkel, O., Fuller, K. K., Gagkaeva, T., Gardiner, D. M., Glenn, A. E., Gold, S. E., Gordon, T. R., Gregory, N. F., Gryzenhout, M., Guarro, J., Gugino, B. K., Gutierrez, S., Hammond-Kosack, K. E., Harris, L. J., Homa, M., Hong, C., Hornok, L., Huang, J., Ilkit, M., Jacobs, A., Jacobs, K., Jiang, C., Del Mar Jimenez-Gasco, M., Kang, S., Kasson, M. T., Kazan, K., Kennell, J. C., Kim, H., Kistler, H. C., Kuldau, G. A., Kulik, T., Kurzai, O., Laraba, I., Laurence, M. H., Lee, T., Lee, Y., Lee, Y., Leslie, J. F., Liew, E. C. Y., Lofton, L. W., Logrieco, A. F., Lopez-Berges, M. S., Luque, A. G., Lysoe, E., Ma, L., Marra, R. E., Martin, F. N., May, S. R., McCormick, S. P., McGee, C., Meis, J. F., Migheli, Q., Nor, N. M. I. M., Monod, M., Moretti, A., Mostert, D., Mule, G., Munaut, F., Munkvold, G. P., Nicholson, P., Nucci, M., O’Donnell, K., Pasquali, M., Pfenning, L. H., Prigitano, A., Proctor, R. H., Ranque, S., Rehner, S. A., Rep, M., Rodriguez-Alvarado, G., Rose, L. J., Roth, M. G., Ruiz-Roldan, C., Saleh, A. A., Salleh, B., Sang, H., Scandiani, M. M., Scauflaire, J., Schmale, D. G. III., Short, D. P. G., Sisic, A., Smith, J. A., Smyth, C. W., Son, H., Spahr, E., Stajich, J. E., Steenkamp, E., Steinberg, C., Subramaniam, R., Suga, H., Summerell, B. A., Susca, A., Swett, C. L., Toomajian, C., Torres-Cruz, T. J., Tortorano, A. M., Urban, M., Vaillancourt, L. J., Vallad, G. E., Van Der Lee, T. A. J., Vanderpool, D., VanDiepeningen, A. D., Vaughan, M. M., Venter, E., Vermeulen, M., Verweij, P. E., Viljoen, A., Waalwijk, C., Wallace, E. C., Walther, G., Wang, J., Ward, T. J., Wickes, B. L., Wiederhold, N. P., Wingfield, M. J., Wood, A. K. M., Xu, J., Yang, X., Yli-Mattila, T., Yun, S., Zakaria, L., Zhang, H., Zhang, N., Zhang, S. X. and Zhang, X. 2021. Phylogenomic analysis of a 55.1-kb 19-gene dataset resolves a monophyletic Fusarium that includes the Fusarium solani species complex. Phytopathology. 111 (7), pp. 1064-1079. https://doi.org/10.1094/PHYTO-08-20-0330-LE

PHI-base in 2022 a multi-species phenotype database for Pathogen–Host Interactions

A - Papers appearing in refereed journals

Urban, M., Cuzick, A., Seager, J., Wood, V., Rutherford, K., Venkatesh, S. Y., Sahu, J., Iyer, S. V., Khamari, L., De Silva, N., Martinez, M. C., Pedro, H., Yates, A. D. and Hammond-Kosack, K. E. 2021. PHI-base in 2022 a multi-species phenotype database for Pathogen–Host Interactions. Nucleic Acids Research. 50, pp. D837-D847. https://doi.org/10.1093/nar/gkab1037

The rise of necrotrophic effectors

A - Papers appearing in refereed journals

Kanyuka, K., Igna, A., Solomon, P. S. and Oliver, R. P. 2021. The rise of necrotrophic effectors. New Phytologist. https://doi.org/10.1111/nph.17811

Identifying aphid resistance in the ancestral wheat Triticum monococcum under field conditions.

A - Papers appearing in refereed journals

Simon, A. L., Caulfield, J. C., Hammond-Kosack, K. E., Field, L. M. and Aradottir, G. I. 2021. Identifying aphid resistance in the ancestral wheat Triticum monococcum under field conditions. Scientific Reports. 11, p. 13495. https://doi.org/10.1038/s41598-021-92883-9

Efficient CRISPR/Cas-Mediated Targeted Mutagenesis in Spring and Winter Wheat Varieties

A - Papers appearing in refereed journals

Hahn, F., Sanjurjo-Loures, L., Sparks, C. A., Kanyuka, K. and Nekrasov, V. 2021. Efficient CRISPR/Cas-Mediated Targeted Mutagenesis in Spring and Winter Wheat Varieties. Plants - Basel. 10 (7), p. 1481. https://doi.org/10.3390/plants10071481

Exploring the diversity of promoter and 5’UTR sequences in ancestral, historic and modern wheat

A - Papers appearing in refereed journals

Hammond-Kosack, M., King, R., Kanyuka, K. and Hammond-Kosack, K. E. 2021. Exploring the diversity of promoter and 5’UTR sequences in ancestral, historic and modern wheat . Plant Biotechnology Journal. https://doi.org/10.1111/pbi.13672

WAKsing plant immunity, waning diseases

A - Papers appearing in refereed journals

Stephens, C., Hammond-Kosack, K. E. and Kanyuka, K. 2021. WAKsing plant immunity, waning diseases. Journal of Experimental Botany. 73 (1), pp. 22-37. https://doi.org/10.1093/jxb/erab422

The vesicular trafficking system component MIN7 is required for minimizing Fusarium graminearum infection

A - Papers appearing in refereed journals

Wood, A. K. M., Panwar, V., Grimwade-Mann, M., Ashfield, T., Hammond-Kosack, K. E. and Kanyuka, K. 2021. The vesicular trafficking system component MIN7 is required for minimizing Fusarium graminearum infection. Journal of Experimental Botany. 72 (13), pp. 5010-5023. https://doi.org/10.1093/jxb/erab170

Take-all disease: New insights into an important wheat root pathogen

A - Papers appearing in refereed journals

Palma-Guerrero, J., Chancellor, T., Spong, J., Canning, G., Hammond, J., McMillan, V. E. and Hammond-Kosack, K. E. 2021. Take-all disease: New insights into an important wheat root pathogen. Trends in Plant Science. 26 (8), pp. 836-848. https://doi.org/10.1016/j.tplants.2021.02.009

Genomics accelerated isolation of a new stem rust avirulence gene - wheat resistance gene pair

A - Papers appearing in refereed journals

Upadhyaya, N. M, Mago, R., Panwar, V., Hewitt, T., Luo, M., Chen, J., Sperschneider, J., Nguyen-Phuc, H., Wang, A., Ortiz, D., Hac, L., Bhatt. D., Li, F., Zhang, J., Ayliffe, M., Figueroa, M., Kanyuka, K., Ellis, J. G. and Dodds, P. N. 2021. Genomics accelerated isolation of a new stem rust avirulence gene - wheat resistance gene pair. Nature Plants. https://doi.org/10.1038/s41477-021-00971-5

Remarkable recent changes in genetic diversity of the avirulence gene AvrStb6 in global populations of the wheat pathogen Zymoseptoria tritici

A - Papers appearing in refereed journals

Stephens, C., Olmez, F., Blyth, H., McDonald, M., Bansal, A., Turgay, E. B., Hahn, F., Saintenac, C., Nekrasov, V., Solomon, P., Milgate, A., Fraaije, B. A., Rudd, J. J. and Kanyuka, K. 2021. Remarkable recent changes in genetic diversity of the avirulence gene AvrStb6 in global populations of the wheat pathogen Zymoseptoria tritici. Molecular Plant Pathology. 22 (9), pp. 1121-1133. https://doi.org/10.1111/mpp.13101

Transient reprogramming of crop plants for agronomic performance

A - Papers appearing in refereed journals

Torti, S., Schlesier, R., Tummler, A., Bartels, D., Romer, P., Koch, B., Werner, S., Panwar, V., Kanyuka, K., Von Wiren, N., Jones, J. D. G., Hause, G., Giritch, A. and Gleba, Y. 2021. Transient reprogramming of crop plants for agronomic performance . Nature Plants. 7, pp. 159-171. https://doi.org/10.1038/s41477-021-00851-y

Ensembl Genomes 2020-enabling non-vertebrate genomic research

A - Papers appearing in refereed journals

Cuzick, A., Howe, K. L., Contreras-Moreira, B., Silva, N. D., Maslen, G., Akanni, W., Allen, J., Alvarez-Jarreta, J., Barba, M., Bolser, D. M., Cambell, L., Carbajo, M., Chakiachvili, M., Christensen, M., Cummins, C., Cuzick, A., Davis, P., Fexova, S., Gall, A., George, N., Gil, L., Gupta, P., Hammond-Kosack, K. E., Haskell, E., Hunt, S. E., Jaiswal, P., Janacek, S. H., Kersey, P. J., Langridge, N., Maheswari, U., Maurel, T., McDowall, M. D., Moore, B., Muffato, M., Naamati, G., Naithani, S., Olson, A., Papatheodorou, I., Patricio, M., Paulini, M., Pedro, H., Perry, E., Preece, J., Rosello, M., Russell, M., Sitnik, V., Staines, D. M., Stein, J., Tello-Ruiz, M. K., Trevanion, S. J., Urban, M., Wei, S., Ware, D., Williams, G., Yates, A. D. and Flicek, P. 2020. Ensembl Genomes 2020-enabling non-vertebrate genomic research. Nucleic Acids Research. 48 (D1), pp. D689-D695. https://doi.org/10.1093/nar/gkz890

Functional evaluation of a homologue of plant rapid alkalinisation factor (RALF) peptides in Fusarium graminearum

A - Papers appearing in refereed journals

Machado, A., Walker, C., Lee, W., Urban, M. and Hammond-Kosack, K. E. 2020. Functional evaluation of a homologue of plant rapid alkalinisation factor (RALF) peptides in Fusarium graminearum . Fungal Biology. 124 (9), pp. 753-765. https://doi.org/10.1016/j.funbio.2020.05.001

Genome Sequence of Fusarium graminearum strain CML3066 isolated from a wheat spike in Southern Brazil

A - Papers appearing in refereed journals

Wood, A. K. M., King, R., Urban, M., Nicolli, C. P., Del Ponte, E. M. and Hammond-Kosack, K. E. 2020. Genome Sequence of Fusarium graminearum strain CML3066 isolated from a wheat spike in Southern Brazil. Microbiology Resource Announcements. 9 (19), pp. e00157-20. https://doi.org/10.1128/MRA.00157-20

Virus-mediated transient expression techniques enable gene function studies in black-grass

A - Papers appearing in refereed journals

Mellado-Sanchez, M., Mcdiarmid, F., Cardoso, V., Kanyuka, K. and Macgregor, D. 2020. Virus-mediated transient expression techniques enable gene function studies in black-grass . Plant Physiology. https://doi.org/10.1104/pp.20.00205

Proteinaceous effector discovery and characterisation in filamentous plant pathogens

A - Papers appearing in refereed journals

Kanja, C. and Hammond-Kosack, K. E. 2020. Proteinaceous effector discovery and characterisation in filamentous plant pathogens. Molecular Plant Pathology. 21 (10), pp. 1353-1376. https://doi.org/10.1111/mpp.12980

A roadmap for gene functional characterisation in crops with large genomes: Lessons from polyploid wheat

A - Papers appearing in refereed journals

Adamski, N. M., Borril, P., Brinton, J., Harrington​, S. A., Marchal, C., Bentley, A. R., Bovill, W. D., Cattivelli, L., Cockram, J., Contreras-Moreira, B., Ford, B., Ghosh, S., Harwood, W., Hassani-Pak, K., Hayta, S., Hickey, L. T., Kanyuka, K., King, J., Maccaferri, M., Naamati, G., Pozniak, C. J., Ramirez-Gonzalez, R. H., Sansaloni, C., Trevaskis, B., Wingen, L. U., Wulff, B. B. H. and Uauy​, C. 2020. A roadmap for gene functional characterisation in crops with large genomes: Lessons from polyploid wheat. eLife. 9, p. e55646. https://doi.org/10.7554/eLife.55646

Virus-mediated transient expression techniques enable genetic modification of Alopecurus myosuroides

A - Papers appearing in refereed journals

Mellado-Sanchez, M., Mcdiarmid, F., Cardoso, V., Kanyuka, K. and Macgregor, D. 2020. Virus-mediated transient expression techniques enable genetic modification of Alopecurus myosuroides. Plant Physiology. 183, pp. 455-459. https://doi.org/10.1104/pp.20.00205

PHI-base - the Pathogen–Host Interactions database

A - Papers appearing in refereed journals

Urban, M., Cuzick, A., Seager, J., Wood, V., Rutherford, K., De Silva, N., Venkatesh, S. Y, Martinez, M. C., Pedro, H., Yates, A. D., Hassani-Pak, K. and Hammond-Kosack, K. E. 2020. PHI-base - the Pathogen–Host Interactions database . Nucleic Acids Research. 48 (Database issue D1), pp. D613-D620. https://doi.org/10.1093/nar/gkz904

A Cytological Analysis of Wheat Meiosis Targeted by Virus-Induced Gene Silencing (VIGS)

B - Book chapters etc edited externally

Desjardins, S., Kanyuka, K. and Higgins, J. D. 2020. A Cytological Analysis of Wheat Meiosis Targeted by Virus-Induced Gene Silencing (VIGS). in: Pradillo, M. and Heckmann, S. (ed.) Plant Meiosis. Methods in Molecular Biology, vol 2061. New York, NY Humana Press Inc. pp. 319-330

A roadmap for gene functional characterisation in wheat

A - Papers appearing in refereed journals

Adamski, N. M., Borril, P., Brinton, J., Harrington​, S. A., Marchal, C., Bentley, A. R., Bovill, W. D., Cattivelli, L., Cockram, J., Contreras-Moreira, B., Ford, B., Ghosh, S., Harwood, W., Hassani-Pak, K., Hayta, S., Hickey, L. T., Kanyuka, K., King, J., Maccaferri, M., Naamati, G., Pozniak, C. J., Ramirez-Gonzalez, R. H., Sansaloni, C., Trevaskis, B., Wingen, L. U., Wulff, B. B. H. and Uauy​, C. 2019. A roadmap for gene functional characterisation in wheat. PeerJ. 7, p. e26877v2. https://doi.org/10.7287/peerj.preprints.26877v2

PHI-Nets: A Network Resource for Ascomycete Fungal Pathogens to Annotate and Identify Putative Virulence Interacting Proteins and siRNA Targets

A - Papers appearing in refereed journals

Janowska-Seja, E. I., Lysenko, A., Urban, M., Rawlings, C. J., Toska, S. and Hammond-Kosack, K. E. 2019. PHI-Nets: A Network Resource for Ascomycete Fungal Pathogens to Annotate and Identify Putative Virulence Interacting Proteins and siRNA Targets. Frontiers in Microbiology. 10 (2721). https://doi.org/10.3389/fmicb.2019.02721

Improving disease resistance in mungbean - A combined genetic and biotechnological approach

Conference poster

Bansal, A., Nekrasov, V., Rout, G. R., Rudd, J. J., Slavov, G., Chand, R. and Kanyuka, K. 2019. Improving disease resistance in mungbean - A combined genetic and biotechnological approach. BSPP 2019: Arms race: Evolution of plant pathogens and their hosts. Exhibition and Conference Centre, University of West England, Bristol, UK 02 Sep 2019

sRNA profiling combined with gene function analysis reveals a lack of evidence for cross-kingdom RNAi in the wheat – Zymoseptoria tritici pathosystem

A - Papers appearing in refereed journals

Kettles, G. J., Hofinger, B. J., Hu, P., Bayon, C., Rudd, J. J., Balmer, D., Courbot, M., Hammond-Kosack, K. E., Scalliet, G. and Kanyuka, K. 2019. sRNA profiling combined with gene function analysis reveals a lack of evidence for cross-kingdom RNAi in the wheat – Zymoseptoria tritici pathosystem. Frontiers in Plant Science. 10 (892). https://doi.org/10.3389/fpls.2019.00892

Non-canonical fungal G-protein coupled receptors promote Fusarium head blight on wheat

A - Papers appearing in refereed journals

Dilks, T., Halsey, K., De Vos, R., Hammond-Kosack, K. E. and Brown, N. A. 2019. Non-canonical fungal G-protein coupled receptors promote Fusarium head blight on wheat. PLOS Pathogens. 15 (4), p. e1007666. https://doi.org/10.1371/journal.ppat.1007666

WGIN Stakeholders' Newsletter [April 2019]

G - Articles in popular magazines and other technical publications

Hammond-Kosack, K. E., Riche, A. B., Mcmillan, V. E., Aradottir, G. I., Hammond-Kosack, M., Lister, C. and Griffiths, S. 2019. WGIN Stakeholders' Newsletter [April 2019]. WGIN Stakeholders' Newsletter.

Saving Plants From Disease

G - Articles in popular magazines and other technical publications

Hammond-Kosack, K. E. 2019. Saving Plants From Disease. FuturumCareers. pp. 1-6. https://doi.org/10.33424/FUTURUM12

Analysis of small RNAs in the Zymoseptoria tritici – wheat interaction

C2 - Non-edited contributions to conferences

Kettles, G. J., Hofinger, B. J., Hu, P., Bayon, C., Rudd, J. J., Balmer, D., Courbot, M., Hammond-Kosack, K. E., Scalliet, G. and Kanyuka, K. 2019. Analysis of small RNAs in the Zymoseptoria tritici – wheat interaction. 30th Fungal Genetics Conference. Pacific Grove, California, USA 12 Mar 2019

GCR1 and GPA1 coupling regulates nitrate, cell wall, immunity and light responses in Arabidopsis

A - Papers appearing in refereed journals

Chakraborty, N., Kanyuka, K., Kumar Jaiswal, D., Kumar, A., Arora, V., Malik, A., Gupta, N., Hooley, R. and Raghuram, N. 2019. GCR1 and GPA1 coupling regulates nitrate, cell wall, immunity and light responses in Arabidopsis. Scientific Reports. 9, p. 5838. https://doi.org/10.1038/s41598-019-42084-2

Using virulence mutants to identify Avr genes in the wheat stem rust fungus, Puccinia graminis f. sp. tritici

C2 - Non-edited contributions to conferences

Dodds, P., Upadhyaya, N., Ortiz, D., Li, F., Chen, J., Miller, M., Luo, M., Mago, R., Ellis, J., Sperschneider, J., Nguyen-Phuc, H., Bouton, C., Steffenson, B., Hirsch, C., Silverstein, K., Park, R., Kanyuka, K. and Figueroa, M. 2019. Using virulence mutants to identify Avr genes in the wheat stem rust fungus, Puccinia graminis f. sp. tritici. 30th Fungal Genetics Conference. Pacific Grove, California, USA 12 Mar 2019

Dramatic recent changes in the population genetic diversity of avirulence gene AvrStb6 in the pathogenic fungus Zymoseptoria tritici

Conference paper

Stephens, C., Blyth, H., Olmez, F., Turgay, E. B., Chen, H., McDonald, M., Solomon, P., Milgate, A., Fraaije, B. A., Rudd, J. J. and Kanyuka, K. 2019. Dramatic recent changes in the population genetic diversity of avirulence gene AvrStb6 in the pathogenic fungus Zymoseptoria tritici. Molecular Biology of Plant Pathogens (MBPP) Conference. John Innes Centre, Norwich, UK 18 Mar 2019

Characterisation of major genes mediating resistance to Septoria tritici blotch disease in wheat.

Conference poster

Tidd, H., Bryant, R and Kanyuka, K. 2019. Characterisation of major genes mediating resistance to Septoria tritici blotch disease in wheat. International Symposium on Cereal Leaf Blights 2019. University College Dublin, Dublin, Ireland 22 May 2019

Cell surface immune receptors: the guardians of the plant’s extracellular spaces

A - Papers appearing in refereed journals

Kanyuka, K. and Rudd, J. J. 2019. Cell surface immune receptors: the guardians of the plant’s extracellular spaces. Current Opinion in Plant Biology. 50, pp. 1-8. https://doi.org/10.1016/j.pbi.2019.02.005

The role of photoprotection in disease resistance to Septoria tritici blotch in wheat

C2 - Non-edited contributions to conferences

Angelopoulou, D., Kanyuka, K., Murchie, E. and Ray, R. 2019. The role of photoprotection in disease resistance to Septoria tritici blotch in wheat. International Symposium on Cereal Leaf Blights 2019. University College Dublin, Dublin, Ireland 22 May 2019

Knocking down wheat meiotic genes through Virus-induced gene-silencing (VIGS)

C2 - Non-edited contributions to conferences

Desjardins, S., Kanyuka, K. and Higgins, J. D. 2019. Knocking down wheat meiotic genes through Virus-induced gene-silencing (VIGS). The Plant and Animal Genome XXVII Conference (PAG). San Diego, CA, USA 12 Jan 2019

MSH2 is required for obligate crossover formation in wheat

C2 - Non-edited contributions to conferences

Ogle, D., Desjardins, S., Gutterman, I., Simmonds, J., Uauy, C., Kanyuka, K. and Higgins, J. D. 2019. MSH2 is required for obligate crossover formation in wheat. The Plant and Animal Genome XXVII Conference (PAG). San Diego, CA, USA 12 Jan 2019

Abstracts of Presentations at ICPP2018: Analysis of Fusarium graminearum pangenome

C1 - Edited contributions to conferences/learned societies

Machado, A., King, R., Urban, M., Del Ponte, E. M., Tessmann, D. J., Kanyuka, K. and Hammond-Kosack, K. E. 2018. Abstracts of Presentations at ICPP2018: Analysis of Fusarium graminearum pangenome. International Congress of Plant Pathology (ICPP) 2018. Boston, USA 29 Jul 2018 American Phytopathological Society (APS). https://doi.org/10.1094/PHYTO-108-10-S1.1

Using virulence mutants to Identify Avr genes in the wheat stem rust fungus, Puccinia graminis f. sp. tritici

C2 - Non-edited contributions to conferences

Upadhyaya, N. M., Ortiz, D., Chen, J., Ellis, J., Li, F., Mago, R., Kanyuka, K., Figueroa, M., Park, R. F. and Dodds, P. 2018. Using virulence mutants to Identify Avr genes in the wheat stem rust fungus, Puccinia graminis f. sp. tritici. International Congress of Plant Pathology (ICPP) 2018. Boston, USA 29 Jul 2018 American Phytopathological Society (APS). https://doi.org/10.1094/PHYTO-108-10-S1.1

Analysis of small RNA silencing in Zymoseptoria tritici – wheat interactions

A - Papers appearing in refereed journals

Kettles, G. J., Hofinger, B. J., Hu, P., Bayon, C., Rudd, J. J., Balmer, D., Courbot, M., Hammond-Kosack, K. E., Scalliet, G. and Kanyuka, K. 2018. Analysis of small RNA silencing in Zymoseptoria tritici – wheat interactions. bioRxiv. https://doi.org/10.1101/501650

Dramatic changes in genetic diversity of the avirulence effector AvrStb6 in global populations of the wheat pathogen Zymoseptoria tritici

Conference poster

Stephens, C., Blyth, H., Olmez, F., McDonald, M., Solomon, P., Milgate, A., Chen, H., Fraaije, B. A., Rudd, J. J. and Kanyuka, K. 2018. Dramatic changes in genetic diversity of the avirulence effector AvrStb6 in global populations of the wheat pathogen Zymoseptoria tritici. British Society of Plant Pathology Presidential Meeting, Warwick 2018. Warwick University 10 Dec 2018 https://doi.org/N/A

Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species

A - Papers appearing in refereed journals

Kersey, P. J., Allen, J. E., Allot, A., Barba, M., Boddu, S., Bolt, B. J., Carvalho-Silva, D., Christensen, M., Davis, P., Grabmueller, C., Kumar, N., Liu, Z., Maurel, T., Moore, B., Mcdowall, M. D., Maheswari, U., Naamati, G., Newman, V., Ong, C. K., Paulini, M., Pedro, H., Perry, E., Russell, M., Sparrow, H., Tapanari, E., Taylor, K., Vullo, A., Williams, G., Zadissia, A., Olson, A., Stein, J., Wei, S., Tello-Ruiz, M., Ware, D., Luciani, A., Potter, S., Finn, R. D., Urban, M., Hammond-Kosack, K. E., Bolser, D. M., De Silva, N., Howe, K. L., Langridge, N., Maslen, G., Staines, D. M. and Yates, A. 2018. Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species. Nucleic Acids Research. 46 (D1), pp. D802-D808. https://doi.org/10.1093/nar/gkx1011

Characterization of an antimicrobial and phytotoxic ribonuclease secreted by the fungal wheat pathogen Zymoseptoria tritici

A - Papers appearing in refereed journals

Kettles, G. J., Bayon, C., Sparks, C. A., Canning, G., Kanyuka, K. and Rudd, J. J. 2018. Characterization of an antimicrobial and phytotoxic ribonuclease secreted by the fungal wheat pathogen Zymoseptoria tritici. New Phytologist. 217 (1), pp. 320-331. https://doi.org/10.1111/nph.14786

Phosphopantetheinyl transferase (Ppt)-mediated biosynthesis of lysine, but not siderophore or DHN melanin, is required for virulence of Zymoseptoria tritici on wheat

A - Papers appearing in refereed journals

Derbyshire, M. C., Gohari, A. M., Mehrabi, R., Kilaru, S., Steinberg, G., Ali, S., Bailey, A., Hammond-Kosack, K. E., Kema, G. H. J. and Rudd, J. J. 2018. Phosphopantetheinyl transferase (Ppt)-mediated biosynthesis of lysine, but not siderophore or DHN melanin, is required for virulence of Zymoseptoria tritici on wheat. Scientific Reports. 8 (17069). https://doi.org/10.1038/s41598-018-35223-8

The adaptation of Fusarium culmorum to DMI Fungicides Is Mediated by Major Transcriptome Modifications in Response to Azole Fungicide, Including the Overexpression of a PDR Transporter (FcABC1).

A - Papers appearing in refereed journals

Hellin, P., King, R., Urban, M., Hammond-Kosack, K. E. and Legreve, A 2018. The adaptation of Fusarium culmorum to DMI Fungicides Is Mediated by Major Transcriptome Modifications in Response to Azole Fungicide, Including the Overexpression of a PDR Transporter (FcABC1). Frontiers in Microbiology. 9 (1385). https://doi.org/10.3389/fmicb.2018.01385

Inter-genome comparison of the Quorn fungus Fusarium venenatum and the closely related plant infecting pathogen Fusarium graminearum

A - Papers appearing in refereed journals

King, R., Brown, N. A., Urban, M. and Hammond-Kosack, K. E. 2018. Inter-genome comparison of the Quorn fungus Fusarium venenatum and the closely related plant infecting pathogen Fusarium graminearum. BMC Genomics. 19, p. 269. https://doi.org/10.1186/s12864-018-4612-2

Elite UK winter wheat cultivars differ in their ability to support the colonisation of beneficial root-infecting fungi

A - Papers appearing in refereed journals

Osborne, S., Mcmillan, V. E., White, R. P. and Hammond-Kosack, K. E. 2018. Elite UK winter wheat cultivars differ in their ability to support the colonisation of beneficial root-infecting fungi. Journal of Experimental Botany. 69 (12), pp. 3103-3115. https://doi.org/10.1093/jxb/ery136

Exploring the resilience of wheat crops grown in short rotations through minimising the build-up of an important soil-borne fungal pathogen

A - Papers appearing in refereed journals

Mcmillan, V. E., Canning, G., Moughan, J., White, R. P., Gutteridge, R. J. and Hammond-Kosack, K. E. 2018. Exploring the resilience of wheat crops grown in short rotations through minimising the build-up of an important soil-borne fungal pathogen. Scientific Reports. 8 (9550), pp. 1-13. https://doi.org/10.1038/s41598-018-25511-8

Foxtail mosaic virus: a new viral vector for protein expression in cereals

A - Papers appearing in refereed journals

Bouton, C., King, R., Chen, H., Azhakanandam, K., Bieri, S., Hammond-Kosack, K. E. and Kanyuka, K. 2018. Foxtail mosaic virus: a new viral vector for protein expression in cereals. Plant Physiology. 177 (4), pp. 1352-1367. https://doi.org/10.1104/pp.17.01679

Shifting the limits in wheat research and breeding using a fully annotated reference genome

A - Papers appearing in refereed journals

International Wheat Genome Sequencing Consortium (IWGSC), Kanyuka, K. and King, R. 2018. Shifting the limits in wheat research and breeding using a fully annotated reference genome. Science - AAAS. 361 (6403), p. eaar7191. https://doi.org/10.1126/science.aar7191

Sharing mutants and experimental information prepublication using FgMutantDb (https://scabusa.org/FgMutantDb)

A - Papers appearing in refereed journals

Baldwin, T. T., Basenko, E., Harb, O., Brown, N. A., Urban, M., Hammond-Kosack, K. E. and Bregitzer, P. P. 2018. Sharing mutants and experimental information prepublication using FgMutantDb (https://scabusa.org/FgMutantDb). Fungal Genetics and Biology. 115 (June), pp. 90-93. https://doi.org/10.1016/j.fgb.2018.01.002

Wheat receptor-kinase-like protein Stb6 controls gene-for-gene resistance to fungal pathogen Zymoseptoria tritici

A - Papers appearing in refereed journals

Saintennac, C., Lee, W. S., Cambon, F., Rudd, J. J., King, R., Marande, W., Powers, S. J., Berges, H., Phillips, A. L., Uauy, C., Hammond-Kosack, K. E., Langin, T. and Kanyuka, K. 2018. Wheat receptor-kinase-like protein Stb6 controls gene-for-gene resistance to fungal pathogen Zymoseptoria tritici. Nature Genetics. 50, pp. 368-374. https://doi.org/10.1038/s41588-018-0051-x

Phenotypic, comparative genomic and transcriptomic analysis of recently collected European Zymoseptoria tritici strains

C2 - Non-edited contributions to conferences

Chen, H., Bayon, C., King, R., Torriani, S. F. F., Bieri, S., Kanyuka, K., Hammond-Kosack, K. E. and Rudd, J. J. 2017. Phenotypic, comparative genomic and transcriptomic analysis of recently collected European Zymoseptoria tritici strains. Zymoseptoria Meeting, 2017, Kiel, Germany.

Stb6 is a wall-associated kinase gene that provides gene-for gene resistance against Zymoseptoria tritici in wheat

C2 - Non-edited contributions to conferences

Saintenac, C., Lee, W. S., Cambon, F., Rudd, J. J., King, R. A., Marande, W., Berges, H., Phillips, A. L., Uauy, C., Hammond-Kosack, K. E., Langin, T. and Kanyuka, K. 2017. Stb6 is a wall-associated kinase gene that provides gene-for gene resistance against Zymoseptoria tritici in wheat. Plant and animal genome conferernce XXV, Dan-Diego CA, USA, 14-18 January 2017. pp. Paper 23713

Host-induced gene silencing for the control of the Fusarium Head Blight in wheat fields

C2 - Non-edited contributions to conferences

Kanyuka, K., Machado, A., Urban, M., Lee, W. S., Brown, N. J., King, R. A., Lau, E. Y., Sparks, C. A., Bonato, A. L. V., Tibola, C. S., Martins, N. F., Aragao, F. J., West, J., Fernandes, J. M. C. and Hammond-Kosack, K. E. 2017. Host-induced gene silencing for the control of the Fusarium Head Blight in wheat fields. 1st COST iPlanta Conferernce; "Creating the plant RNAi research network CA15223", La Sapienza - CNR Headquarter , Rome, Italy, 15-17 February 2017.

RNAi as an emerging approach to control Fusarium Head Blight disease and mycotoxin contamination in cereals

A - Papers appearing in refereed journals

Machado, A., Brown, N. A., Urban, M., Kanyuka, K. and Hammond-Kosack, K. E. 2017. RNAi as an emerging approach to control Fusarium Head Blight disease and mycotoxin contamination in cereals. Pest Management Science. 74 (4), pp. 790-799. https://doi.org/10.1002/ps.4748

A spatial temporal analysis of the Fusarium graminearum transcriptome during symptomless and symptomatic wheat infection

A - Papers appearing in refereed journals

Brown, N. A., Evans, J., Mead, A. and Hammond-Kosack, K. E. 2017. A spatial temporal analysis of the Fusarium graminearum transcriptome during symptomless and symptomatic wheat infection. Molecular Plant Pathology. 18 (9), pp. 1295-1312. https://doi.org/10.1111/mpp.12564

A review of wheat diseases – a field perspective

A - Papers appearing in refereed journals

Figueroa, M., Hammond-Kosack, K. E. and Solomon, P. S. 2017. A review of wheat diseases – a field perspective. Molecular Plant Pathology. 19 (6), pp. 1523-1536. https://doi.org/10.1111/mpp.12618

A new proteinaceous pathogen-associated molecular pattern (PAMP) identified in Ascomycete fungi induces cell death in Solanaceae

A - Papers appearing in refereed journals

Franco-Orozco, B., Berepiki, A., Ruiz, O., Gamble, L., Griffe, L. L., Wang, S., Birch, P. R. J., Kanyuka, K. and Avrova, A. 2017. A new proteinaceous pathogen-associated molecular pattern (PAMP) identified in Ascomycete fungi induces cell death in Solanaceae. New Phytologist. 214 (4), pp. 1657-1672. https://doi.org/10.1111/nph.14542

PHI-base: a new interface and further additions for the multi-species pathogen–host interactions database

A - Papers appearing in refereed journals

Urban, M., Cuzick, A., Rutherford, K., Irvine, A. G., Pedro, H., Pant, R., Sadanadan, V., Khamari, L., Billal, S., Mohanty, Sagar and Hammond-Kosack, K. E. 2017. PHI-base: a new interface and further additions for the multi-species pathogen–host interactions database. Nucleic Acids Research. 45 (D1), pp. D604-D610. https://doi.org/10.1093/nar/gkw1089

mlo-based powdery mildew resistance in hexaploid bread wheat generated by a non-transgenic TILLING approach

A - Papers appearing in refereed journals

Acevedo-Garcia, J., Spencer, D., Thieron, H., Reinstädler, A., Hammond-Kosack, K. E., Phillips, A. L. and Panstruga, R. 2017. mlo-based powdery mildew resistance in hexaploid bread wheat generated by a non-transgenic TILLING approach. Plant Biotechnology Journal. 15 (3). https://doi.org/10.1111/pbi.12631

Annotation of Fusarium graminearum (PH-1) version 5.0

A - Papers appearing in refereed journals

King, R., Urban, M. and Hammond-Kosack, K. E. 2017. Annotation of Fusarium graminearum (PH-1) version 5.0. Genome Announcements. 5 (2), pp. e01479-16. https://doi.org/10.1128/genomeA.01479-16

Sequence diversification in recessive alleles of two host factor genes suggests adaptive selection for bymovirus resistance in cultivated barley from East Asia

A - Papers appearing in refereed journals

Yang, P., Habekuss, A., Hofinger, Bernhard J., Kanyuka, K., Kilian, B., Graner, Andreas, Ordon, Frank and Stein, Nils 2017. Sequence diversification in recessive alleles of two host factor genes suggests adaptive selection for bymovirus resistance in cultivated barley from East Asia. Theoretical and Applied Genetics. 130 (2), pp. 331-344. https://doi.org/10.1007/s00122-016-2814-z

Apoplastic recognition of multiple candidate effectors from the wheat pathogen Zymoseptoria tritici in the nonhost plant Nicotiana benthamiana

A - Papers appearing in refereed journals

Kettles, G. J., Bayon, C., Canning, G., Rudd, J. J. and Kanyuka, K. 2017. Apoplastic recognition of multiple candidate effectors from the wheat pathogen Zymoseptoria tritici in the nonhost plant Nicotiana benthamiana. New Phytologist. 213 (1), pp. 338-350. https://doi.org/10.1111/nph.14215

A conserved fungal glycosyltransferase facilitates pathogenesis of plants by enabling hyphal growth on solid surfaces

A - Papers appearing in refereed journals

King, R., Urban, M., Lauder, R. P., Hawkins, N. J., Evans, M., Plummer, A., Halsey, K., Lovegrove, A., Hammond-Kosack, K. E. and Rudd, J. J. 2017. A conserved fungal glycosyltransferase facilitates pathogenesis of plants by enabling hyphal growth on solid surfaces. PLOS Pathogens. 13 (10), p. e1006672. https://doi.org/10.1371/journal.ppat.1006672

Loss of AvrSr50 by somatic exchange in stem rust leads to virulence for Sr50 resistance in wheat

A - Papers appearing in refereed journals

Chen, J., Upadhyaya, N. M., Ortiz, D., Sperschneider, J., Li, F., Bouton, C., Breen, S., Dong, C., Xu, B., Zhang, X., Mago, R., Newell, K., Xia, X., Bernoux, M., Taylor, J. M., Steffenson, B., Jin, Y., Zhang, P., Kanyuka, K., Figueroa, M., Ellis, J. G., Park, R. F. and Dodds, P. N. 2017. Loss of AvrSr50 by somatic exchange in stem rust leads to virulence for Sr50 resistance in wheat. Science - AAAS. 358 (6370), pp. 1607-1610. https://doi.org/10.1126/science.aao4810

GPCRs from fusarium graminearum detection, modeling and virtual screening - the search for new routes to control head blight disease.

A - Papers appearing in refereed journals

Bresso, E., Togawa, R., Hammond-Kosack, K. E., Urban, M., Maigret, B. and Martins, N. F. 2016. GPCRs from fusarium graminearum detection, modeling and virtual screening - the search for new routes to control head blight disease. BMC Bioinformatics. 17 (Suppl 18), p. 463. https://doi.org/10.1186/s12859-016-1342-9

Pseudomonas spp. diversity is negatively associated with suppression of the wheat take-all pathogen

A - Papers appearing in refereed journals

Mehrabi, Z., Mcmillan, V. E., Clark, I. M., Canning, G., Hammond-Kosack, K. E., Preston, G., Hirsch, P. R. and Mauchline, T. H. 2016. Pseudomonas spp. diversity is negatively associated with suppression of the wheat take-all pathogen. Scientific Reports. 6. https://doi.org/10.1038/srep29905

An evolutionary conserved wall-associated kinase like protein controls gene-for gene resistance to Zymoseptoria tritici in wheat

C2 - Non-edited contributions to conferences

Saintenac, C., Lee, W-S., Cambon, F., Rudd, J. J., King, R., Phillips, A. L., Uauy, C., Hammond-Kosack, K. E., Langin, T. and Kanyuka, K. 2016. An evolutionary conserved wall-associated kinase like protein controls gene-for gene resistance to Zymoseptoria tritici in wheat. Achieving durable resistance to wheat diseases and pests, Minneapolis, Bloomington, Minnesota, 2-3 November, 2016. pp. 22

Evolution of recessive resistance genes against the bymovirus disease of barley

C2 - Non-edited contributions to conferences

Yang, P., Habekuss, A., Hofinger, B. J., Kanyuka, K., Kilian, B., Graner, A., Ordon, F. and Stein, N. 2016. Evolution of recessive resistance genes against the bymovirus disease of barley.  Abstacts 12th International Barely Genetics Symposium, Minneapolis, Minnesota, USA, 26-30 June, 2016. pp. Poster 215

A detailed curation of the Zymoseptoria tritici IPO323 gene annotation

C2 - Non-edited contributions to conferences

King, R., Rudd, J. J. and Kanyuka, K. 2016. A detailed curation of the Zymoseptoria tritici IPO323 gene annotation. Abstracts 9th International Symposium on Septoria Diseases of Cereals (ISSDC), Paris, France, 7-9 April, 2016. pp. P0927

Resurrecting a 750-year-old plant virus

C2 - Non-edited contributions to conferences

Bouton, C., Smith, O., Ruiz-Rivero, O., Allaby, R., Hammond-Kosack, K. E. and Kanyuka, K. 2016. Resurrecting a 750-year-old plant virus. Abstracts Internation Advances in Plant Virology, Univerity of Greenwich, Greenwich, UK, 7-9 September, 2016.

A genomics approach to identify effectors in Rhynchosporium commune essential for pathogenicity on barley

C2 - Non-edited contributions to conferences

Ford, K., Gamble, L., Griffe, L., Berepiki, A., Epihov, D., Knogge, W., Newton, A., Hammond-Kosack, K. E., Kanyuka, K. and Arova, A. 2016. A genomics approach to identify effectors in Rhynchosporium commune essential for pathogenicity on barley. Abstracts 13th European Conferernce on Fungal Genetics , Paris France , 3-6 April, 2016. pp. CS2M39

A cytotoxic effector from the wheat pathogen Zymoseptoria tritici

C2 - Non-edited contributions to conferences

Kettles, G. J., Kanyuka, K. and Rudd, J. J. 2016. A cytotoxic effector from the wheat pathogen Zymoseptoria tritici. Abstract IS-MPMI XVII Congress, Portland, Oregon, USA, 17-21 July, 2016. pp. Abstract No P6-144

Solanaceous species recognise a novel PAMP from Rhynchosporium commune

C2 - Non-edited contributions to conferences

Franco, B., Berepiki, A., Birch, P. R. J., Kanyuka, K. and Avrova, A. 2016. Solanaceous species recognise a novel PAMP from Rhynchosporium commune. Abstracts IS-MPMI XVII Congress, Portland, Oregon, USA, 17-21 July, 2016. pp. Abstract No P7-170

The wheat Stb6 gene controlling a gene-for-gene resistance to Zymoseptoria tritici encodes a wall-associated kinase like protein

C2 - Non-edited contributions to conferences

Saintenac, C., Lee, W-S., Cambon, F., Rudd, J. J., King, R., Phillips, A. L., Uauy, C., Hammond-Kosack, K. E., Langin, T. and Kanyuka, K. 2016. The wheat Stb6 gene controlling a gene-for-gene resistance to Zymoseptoria tritici encodes a wall-associated kinase like protein. Abstracts IS-MPMI XVII Congress, Portland, Oregon, USA, 17-21 July, 2016. pp. Abstract Number: C18-4, P15-434

Effector biology of Zymoseptoria tritici during interactions with wheat and with non-host plants

C2 - Non-edited contributions to conferences

Kettles, G. J., King, R., Hooper, J., Skinner, W., Hargreaves, J., Kanyuka, K., Fraaije, B. A. and Rudd, J. J. 2016. Effector biology of Zymoseptoria tritici during interactions with wheat and with non-host plants. IS-MPMI XVII Congress, Portland, Oregon, USA, 17-21 July, 2016. pp. Abstract Number S6-3

Wheat homologues of BAK1 contribute to basal resistance against Zymoseptoria tritici and Fusarium graminearum

C2 - Non-edited contributions to conferences

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2016. Wheat homologues of BAK1 contribute to basal resistance against Zymoseptoria tritici and Fusarium graminearum. IS-MPMI XVII Conress, Portland, Oregon, USA, 17-21 July, 2016. pp. Abstract Number P18-680

Neotrophic effectors from Zymoseptoria tritici

C1 - Edited contributions to conferences/learned societies

Kettles, G. J., Kanyuka, K. and Rudd, J. J. 2016. Neotrophic effectors from Zymoseptoria tritici. 9th International Symposium of Septoria Disease of Cereals (ISSDC), Paris, France, 7-9 April, 2016. pp. Speaker Abstracts Session 4 : Cell biology and host-pathogen interactions

A novel fungal PAMP identified in Rhynchosporium commune is recognised in dicots

C1 - Edited contributions to conferences/learned societies

Avrova, A., Franco, B., Berepiki, A., Birch, P. and Kanyuka, K. 2016. A novel fungal PAMP identified in Rhynchosporium commune is recognised in dicots. Abstracts 9th International Symposium on Spetoria Disease of Cereals (ISSDSC), Paris, France, 7-9 April, 2016.

Using the phenotypic information in the pathogen-host interactions database (PHI-BASE) to explore Fusarium and Magnaporthe genomes, transcriptomes and proteomes

C1 - Edited contributions to conferences/learned societies

Urban, M., Irvine, A., Cuzick, A. and Hammond-Kosack, K. E. 2016. Using the phenotypic information in the pathogen-host interactions database (PHI-BASE) to explore Fusarium and Magnaporthe genomes, transcriptomes and proteomes. Proceedings 5th ISFHB - 2nd IWWB Symposium, 5-10, Florianopolis, Brasil.

First draft genome sequence of a UK strain (UK99) of Fusarium culmorum

A - Papers appearing in refereed journals

Urban, M., King, R., Andongabo, A. E., Maheswari, U., Pedro, H., Kersey, P. and Hammond-Kosack, K. E. 2016. First draft genome sequence of a UK strain (UK99) of Fusarium culmorum. Genome Announcements. 4 (5), pp. e00771-16. https://doi.org/10.1128/genomeA.00771-16

The genome of the emerging barley pathogen Ramularia collo-cygni

A - Papers appearing in refereed journals

McGrann, G. R. D., Andongabo, A. E., Sjokvist, E., Trivedi, U., Dussart, F., Kaczmarek, M., Mackenzie, A., Fountaine, J. M., Taylor, J. M. G., Paterson, L. J., Gorniak, K., Burnett, F., Kanyuka, K., Hammond-Kosack, K. E., Rudd, J. J., Blaxter, M. and Havis, N. D. 2016. The genome of the emerging barley pathogen Ramularia collo-cygni. BMC Genomics. 17 (1), p. 584. https://doi.org/10.1186/s12864-016-2928-3

A metabolic gene cluster in the wheat W1 and the barley Cer-cqu loci determines beta-diketone biosynthesis and glaucousness

A - Papers appearing in refereed journals

Hen-Avivi, S., Savin, O., Racovita, R. C., Lee, W-S., Adamski, N. M., Malitsky, S., Almekias-Siegl, E., Levy, M., Vautrin, S., Berges, H., Friedlander, G., Kartvelishvily, E., Ben-Zvi, G., Alkan, N., Uauy, C., Kanyuka, K., Jetter, R., Distelfeld, A. and Aharoni, A. 2016. A metabolic gene cluster in the wheat W1 and the barley Cer-cqu loci determines beta-diketone biosynthesis and glaucousness. The Plant Cell. 28 (6), pp. 1440-1460. https://doi.org/10.1105/tpc.16.00197

A role for BAK1 in the Zymoseptoria tritici-wheat interaction

C2 - Non-edited contributions to conferences

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2016. A role for BAK1 in the Zymoseptoria tritici-wheat interaction. Abstracts 9th International Symposium on Septoria Diseases of Cereals, Paris, 7-9 April 2016.

Structure-based virtual screening of hypothetical inhibitors of the enzyme longiborneal synthase - a potential target to reduce Fusarium head blight disease

A - Papers appearing in refereed journals

Bresso, E., Leroux, V., Urban, M., Hammond-Kosack, K. E., Maigret, B. and Martins, N. F. 2016. Structure-based virtual screening of hypothetical inhibitors of the enzyme longiborneal synthase - a potential target to reduce Fusarium head blight disease. Journal Of Molecular Modeling. 22, p. 163. https://doi.org/10.1007/s00894-016-3021-1

Publishing FAIR data: an exemplar methodology utilizing PHI-base

A - Papers appearing in refereed journals

Rodriguez-Iglesias, A., Rodriguez-Gonzales, A., Irvine, A. G., Sesma, A., Urban, M., Hammond-Kosack, K. E. and Wilkinson, M. D. 2016. Publishing FAIR data: an exemplar methodology utilizing PHI-base. Frontiers in Plant Science. 7, p. 641. https://doi.org/10.3389/fpls.2016.00641

Cloning of Stb6 - the first gene conferring race-specific resistance against the Septoria tritici blotch disease

C2 - Non-edited contributions to conferences

Kanyuka, K., Saintenac, C., Lee, W-S., Cambon, F., King, R., Phillips, A. L., Uauy, C., Hammond-Kosack, K. E. and Langin, T. 2016. Cloning of Stb6 - the first gene conferring race-specific resistance against the Septoria tritici blotch disease. Abstracts 9th International Symposium on Septoria Diseases of Cereals, Paris, 7-9 April 2016.

Dissecting the molecular interactions between wheat and the fungal pathogen Zymoseptoria tritici

A - Papers appearing in refereed journals

Kettles, G. J. and Kanyuka, K. 2016. Dissecting the molecular interactions between wheat and the fungal pathogen Zymoseptoria tritici. Frontiers in Plant Science. 7, p. 508. https://doi.org/10.3389/fpls.2016.00508

PhytoPath: an integrative resource for plant pathogen genomics

A - Papers appearing in refereed journals

Pedro, H., Maheswari, U., Urban, M., Irvine, A. G., Cuzick, A., Mcdowall, M. D., Staines, D. M., Kulesha, E., Hammond-Kosack, K. E. and Kersey, P. J. 2016. PhytoPath: an integrative resource for plant pathogen genomics. Nucleic Acids Research. 44 (D1), pp. D688-D693. https://doi.org/10.1093/nar/gkv1052

The trans-kingdom identification of negative regulators of pathogen hypervirulence

A - Papers appearing in refereed journals

Brown, N. A., Urban, M. and Hammond-Kosack, K. E. 2016. The trans-kingdom identification of negative regulators of pathogen hypervirulence. FEMS Microbiology Reviews. 40 (1), pp. 19-40. https://doi.org/10.1093/femsre/fuv042

Uniting genetics and chemistry to reduce the risk of take-all disease in 2nd wheat crops

C1 - Edited contributions to conferences/learned societies

Moughan, J., Mcmillan, V. E., Melichar, J., Ranner, D., Thornton, C., Whalley, W. R. and Hammond-Kosack, K. E. 2015. Uniting genetics and chemistry to reduce the risk of take-all disease in 2nd wheat crops. Abstracts 9th Symposium International Society for Root Research (ISRR) "Roots Down Under", Canberra, Australia, 6-9 Octomber, 2015. pp. P90

Exploring the susceptibility of cereal species to Phialophora fungi

C1 - Edited contributions to conferences/learned societies

Osborne, S., Mcmillan, V. E., Whalley, W. R., Foulkes, J. and Hammond-Kosack, K. E. 2015. Exploring the susceptibility of cereal species to Phialophora fungi. Abstracts Molecular Biology of Plant Pathogens Conference (MBPP), University of West England, Bristol, 8-9 April, 2015. pp. 56

Toxic effectors from the wheat pathogen Zymoseptoria tritici

C2 - Non-edited contributions to conferences

Kettles, G. J., Cairns, C., Haynes, K., Kanyuka, K. and Rudd, J. J. 2015. Toxic effectors from the wheat pathogen Zymoseptoria tritici. Abstracts MonoGram 2015, Harpenden, 29 April-1 May 2015 .

Candidate necrotrophic effectors from the wheat pathogen Zymoseptoria tritici

C2 - Non-edited contributions to conferences

Kettles, G. J., Cairns, C., Haynes, K., Kanyuka, K. and Rudd, J. J. 2015. Candidate necrotrophic effectors from the wheat pathogen Zymoseptoria tritici. Abstracts 28th Fungal Genetics Conference, Pacific Grove, 17-22 March 2015 . pp. 134

Plant fungal resistance gene. WO2017103582 (A1)

H1 - Patents granted

Kanyuka, K., Saintenac, C., Cambon, F., Langin, T., Lee, W-S. and Hammond-Kosack, K. E. 2015. Plant fungal resistance gene. WO2017103582 (A1).

Responses to plant pathogens

B - Book chapters etc edited externally

Hammond-Kosack, K. E. and Jones, J. D. G. 2015. Responses to plant pathogens. in: Jones, R. L., Buchanan, B. B. and Gruissem, W. (ed.) Biochemistry and molecular biology of plants, 2nd ed John Wiley & Sons Chichester, West Sussex. pp. 984-1050

Investigating a potential link between take-all disease progression and root system phenotypes in two important elite winter wheat cultivars

G - Articles in popular magazines and other technical publications

Baggs, E., Moughan, J., Mcmillan, V. E. and Hammond-Kosack, K. E. 2015. Investigating a potential link between take-all disease progression and root system phenotypes in two important elite winter wheat cultivars. BSPP News. 78, pp. 34-35.

Secreted biomolecules in fungal plant pathogenesis

B - Book chapters etc edited externally

Brown, N. A. and Hammond-Kosack, K. E. 2015. Secreted biomolecules in fungal plant pathogenesis. in: Gupta, V. K., Sreenivasaprasad, S. and Mach, R. L. (ed.) Fungal biomolecules: sources, applications and recent developments John Wiley & Sons Chichester, West Sussex. pp. 263-310

An analysis of Pseudomonas genomic diversity in take-all infected wheat fields reveals the lasting impact of wheat cultivars on the soil microbiota

A - Papers appearing in refereed journals

Mauchline, T. H., Chedom-Fotso, D., Chandra, G., Samuels, T., Greenaway, N., Backhaus, A., Mcmillan, V. E., Canning, G., Powers, S. J., Hammond-Kosack, K. E., Hirsch, P. R., Clark, I. M., Mehrabi, Z., Roworth, J., Burnell, J. and Malone, J. G. 2015. An analysis of Pseudomonas genomic diversity in take-all infected wheat fields reveals the lasting impact of wheat cultivars on the soil microbiota. Environmental Microbiology. 17 (11), pp. 4764-4778. https://doi.org/10.1111/1462-2920.13038

Host to a stranger: Arabidopsis and Fusarium ear blight

A - Papers appearing in refereed journals

Brewer, H. C. and Hammond-Kosack, K. E. 2015. Host to a stranger: Arabidopsis and Fusarium ear blight. Trends in Plant Science. 20, pp. 651-663. https://doi.org/10.1016/j.tplants.2015.06.011

G-protein alpha-subunit (GPA1) regulates stress, nitrate and phosphate response, flavonoid biosynthesis, fruit/seed development and substantially shares GCR1 regulation in A. thaliana

A - Papers appearing in refereed journals

Chakroborty, N., Sharma, P., Kanyuka, K., Pathak, R. R., Choudhury, D., Hooley, R. and Raghuram, N. 2015. G-protein alpha-subunit (GPA1) regulates stress, nitrate and phosphate response, flavonoid biosynthesis, fruit/seed development and substantially shares GCR1 regulation in A. thaliana. Plant Molecular Biology. 89, pp. 559-576. https://doi.org/10.1007/s11103-015-0374-2

Using the pathogen-host interactions database (PHI-base) to investigate plant pathogen genomes and genes implicated in virulence

A - Papers appearing in refereed journals

Urban, M., Irvine, A. G., Cuzick, A. and Hammond-Kosack, K. E. 2015. Using the pathogen-host interactions database (PHI-base) to investigate plant pathogen genomes and genes implicated in virulence. Frontiers in Plant Science. 6, p. 605. https://doi.org/10.3389/fpls.2015.00605

The completed genome sequence of the pathogenic ascomycete fungus Fusarium graminearum

A - Papers appearing in refereed journals

King, R., Urban, M., Hammond-Kosack, M. C. U., Hassani-Pak, K. and Hammond-Kosack, K. E. 2015. The completed genome sequence of the pathogenic ascomycete fungus Fusarium graminearum. BMC Genomics. 16, p. 544. https://doi.org/10.1186/s12864-015-1756-1

Analysis of cytochrome b5 reductase-mediated metabolism in the phytopathogenic fungus Zymoseptoria tritici reveals novel functionalities implicated in virulence

A - Papers appearing in refereed journals

Derbyshire, M. C., Michaelson, L. V., Parker, J., Kelly, S., Thacker, U., Powers, S. J., Bailey, A., Hammond-Kosack, K. E., Courbot, M. and Rudd, J. J. 2015. Analysis of cytochrome b5 reductase-mediated metabolism in the phytopathogenic fungus Zymoseptoria tritici reveals novel functionalities implicated in virulence. Fungal Genetics and Biology. 82 (September), pp. 69-84. https://doi.org/10.1016/j.fgb.2015.05.008

An interspecies comparative analysis of the predicted secretomes of the necrotrophic plant pathogens Sclerotinia sclerotiorum and Botrytis cinerea

A - Papers appearing in refereed journals

Heard, S., Brown, N. A. and Hammond-Kosack, K. E. 2015. An interspecies comparative analysis of the predicted secretomes of the necrotrophic plant pathogens Sclerotinia sclerotiorum and Botrytis cinerea. PLOS ONE. 10, p. e0130534. https://doi.org/10.1371/journal.pone.0130534

Whole-genome analysis of Fusarium graminearum insertional mutants identifies virulence associated genes and unmasks untagged chromosomal deletions

A - Papers appearing in refereed journals

Urban, M., King, R., Hassani-Pak, K. and Hammond-Kosack, K. E. 2015. Whole-genome analysis of Fusarium graminearum insertional mutants identifies virulence associated genes and unmasks untagged chromosomal deletions. BMC Genomics. 16, p. 261. https://doi.org/10.1186/s12864-015-1412-9

Virus induced gene silencing (VIGS) for functional anaylsis of wheat genes involved in Zymoseptoria tritici susceptibiblity and resistance

A - Papers appearing in refereed journals

Lee, W-S., Rudd, J. J. and Kanyuka, K. 2015. Virus induced gene silencing (VIGS) for functional anaylsis of wheat genes involved in Zymoseptoria tritici susceptibiblity and resistance. Fungal Genetics and Biology. 79 (June), pp. 84-88. https://doi.org/10.1016/j.fgb.2015.04.006

Deregulation of plant cell death through disruption of chloroplast functionality affects asexual sporulation of Zymoseptoria tritici on wheat

A - Papers appearing in refereed journals

Lee, W-S., Devonshire, B. J., Hammond-Kosack, K. E., Rudd, J. J. and Kanyuka, K. 2015. Deregulation of plant cell death through disruption of chloroplast functionality affects asexual sporulation of Zymoseptoria tritici on wheat. Molecular Plant-Microbe Interactions - MPMI. 28, pp. 590-604. https://doi.org/10.1094/MPMI-10-14-0346-R

In planta transient expression systems for monocots

B - Book chapters etc edited externally

Lee, W-S., Hammond-Kosack, K. E. and Kanyuka, K. 2015. In planta transient expression systems for monocots. in: Davey, M. R., Azhakanandam, K., Daniell, H. and Silverstone, A. (ed.) Recent advancements in gene expression and enabling technologies in crop plants Springer, New York. pp. 391-432

Plant virus particles carrying tumour antigen activate TLR7 and induce high levels of protective antibody

A - Papers appearing in refereed journals

Jobsri, J., Allen, A., Rajagopal, D., Shipton, M., Kanyuka, K., Lomonossoff, G. P., Ottensmeier, C., Diebold, S. S., Stevenson, F. K. and Savelyeva, N. 2015. Plant virus particles carrying tumour antigen activate TLR7 and induce high levels of protective antibody. PLOS ONE. 10, p. e0118096. https://doi.org/10.1371/journal.pone.0118096

Transcriptome and metabolite profiling of the infection cycle of Zymoseptoria tritici on wheat reveals a biphasic interaction with plant immunity involving differential pathogen chromosomal contributions and a variation on the hemibiotrophic lifestyle definition

A - Papers appearing in refereed journals

Rudd, J. J., Kanyuka, K., Hassani-Pak, K., Derbyshire, M., Andongabo, A. E., Devonshire, J., Lysenko, A., Saqi, M., Desai, N. M., Powers, S. J., Hooper, J., Ambroso, L., Bharti, A., Farmer, A., Hammond-Kosack, K. E., Dietrich, R. A. and Courbot, M. 2015. Transcriptome and metabolite profiling of the infection cycle of Zymoseptoria tritici on wheat reveals a biphasic interaction with plant immunity involving differential pathogen chromosomal contributions and a variation on the hemibiotrophic lifestyle definition. Plant Physiology. 167 (3), pp. 1158-1185. https://doi.org/10.1104/pp.114.255927

Transcriptome analysis of Arabidopsis GCR1 mutant reveals its roles in stress, hormones, secondary metabolism and phosphate starvation

A - Papers appearing in refereed journals

Chakraborty, N., Sharma, P., Kanyuka, K., Pathak, R. R., Choudhury, D., Hooley, R. A. and Raghuram, N. 2015. Transcriptome analysis of Arabidopsis GCR1 mutant reveals its roles in stress, hormones, secondary metabolism and phosphate starvation. PLOS ONE. 10, p. e0117819. https://doi.org/10.1371/journal.pone.0117819

The Pathogen-Host Interactions database (PHI-base): additions and future developments

A - Papers appearing in refereed journals

Urban, M., Pant, R., Raghunath, A., Irvine, A. G., Pedro, H. and Hammond-Kosack, K. E. 2015. The Pathogen-Host Interactions database (PHI-base): additions and future developments. Nucleic Acids Research. 43, pp. D645-D655. https://doi.org/10.1093/nar/gku1165

Functional analysis of a wheat homeodomain protein, TaR1, reveals that host chromatin remodelling influences the dynamics of the switch to necrotrophic growth in the phytopathogenic fungus Zymoseptoria tritici

A - Papers appearing in refereed journals

Lee, J., Orosa, B., Millyard, L., Edwards, M., Kanyuka, K., Gatehouse, A., Rudd, J. J., Hammond-Kosack, K. E., Pain, N. and Sadanandom, A. 2015. Functional analysis of a wheat homeodomain protein, TaR1, reveals that host chromatin remodelling influences the dynamics of the switch to necrotrophic growth in the phytopathogenic fungus Zymoseptoria tritici. New Phytologist. 206 (2), pp. 598-605. https://doi.org/10.1111/nph.13323

Functional analysis of candidate secreted protein effectors from the wheat pathogen Zymoseptoria tritici

C2 - Non-edited contributions to conferences

Kettles, G. J., Cairns, C., Haynes, K., Kanyuka, K. and Rudd, J. J. 2014. Functional analysis of candidate secreted protein effectors from the wheat pathogen Zymoseptoria tritici. Abstracts 16th International Congress on Molecular Plant-Microbe Interactions (IS-MPMI), Rhodes, 6-10 July 2014 . pp. P310

Mutations in the Arabidopsis homoserine kinase gene DMR1 confer enhanced resistance to Fusarium culmorum and F. graminearum

A - Papers appearing in refereed journals

Brewer, H. C., Hammond-Kosack, K. E. and Hawkins, N. D. 2014. Mutations in the Arabidopsis homoserine kinase gene DMR1 confer enhanced resistance to Fusarium culmorum and F. graminearum. BMC Plant Biology. 14, p. 317. https://doi.org/10.1186/s12870-014-0317-0

Functional characterisation of members of the cytochrome B5 reductase gene family in the wheat-infecting fungus Zymoseptoria tritici

C2 - Non-edited contributions to conferences

Derbyshire, M., Courbot, M., Hammond-Kosack, K. E., Michaelson, L. V., Parker, J., Thacker, U., Li, N., Bailey, A. and Rudd, J. J. 2014. Functional characterisation of members of the cytochrome B5 reductase gene family in the wheat-infecting fungus Zymoseptoria tritici. Abstracts 16th International Congress on Molecular Plant-Microbe Interactions, Rhodes, 6-10 July 2014 . pp. P703

A tale of one fungal pathogen of wheat: how it evades host surveillance and then hijacks host defences

C2 - Non-edited contributions to conferences

Kanyuka, K., Lysenko, A., Saqi, M., Derbyshire, M., Andongabo, A. E., Hassani-Pak, K., Hammond-Kosack, K. E., Courbot, M. and Rudd, J. J. 2014. A tale of one fungal pathogen of wheat: how it evades host surveillance and then hijacks host defences. Abstracts 16th International Congress on Molecular Plant-Microbe Interactions (IS-MPMI 2014), Rhodes, 6-10 July 2014 . pp. P069

Identification and analysis of differentially expressed genes in the wheat- Zymoseptoria tritici interaction

C2 - Non-edited contributions to conferences

Kanyuka, K., Andongabo, A. E., Hassani-Pak, K., Powers, S. J., Lysenko, A., Saqi, M., Derbyshire, M., Lee, W-S., Hammond-Kosack, K. E., Courbot, M. and Rudd, J. J. 2014. Identification and analysis of differentially expressed genes in the wheat- Zymoseptoria tritici interaction. Abstracts Plant Genomics Congress, London, 12-13 May 2014 .

Rhynchosporium commune avirulence gene discovery: a path to more durable barley resistance

C2 - Non-edited contributions to conferences

Gamble, L., Lynott, J., Berepiki, A., Kanyuka, K., Ruiz, O., Munsterkotter, M., Knogge, W., Newton, A. C., Birch, P. R. J. and Avrova, A. 2014. Rhynchosporium commune avirulence gene discovery: a path to more durable barley resistance. Abstracts 16th International Congress on Molecular Plant-Microbe Interactions (IS-MPMI 2014), Rhodes, 6-10 July 2014 . pp. P332

Fine mapping of Stb6, a major resistance gene effective against Zymoseptoria tritici isolate IPO323, in wheat

C2 - Non-edited contributions to conferences

Cambon, F., Lasserre-Zuber, P., Langin, T., Kanyuka, K. and Saintenac, C. 2014. Fine mapping of Stb6, a major resistance gene effective against Zymoseptoria tritici isolate IPO323, in wheat. Abstracts Mycosphaerella Research Community Meeting, Exeter, 11-12 September 2014 .

Rhynchosporium commune effector compliment and their role in pathogenicity on barley

C2 - Non-edited contributions to conferences

Avrova, A., Gamble, L., Griffe, L., Franco Orozco, B., Ruiz, O., Munsterkotter, M., Knogge, W., Newton, A., Birch, P., Hammond-Kosack, K. E. and Kanyuka, K. 2014. Rhynchosporium commune effector compliment and their role in pathogenicity on barley. Abstracts 16th International Congress on Molecular Plant-Microbe Interactions (IS-MPMI 2014), Rhodes, 6-10 July 2014 . pp. P335

Rhynchosporium commune effectors identification and exploitation

C2 - Non-edited contributions to conferences

Avrova, A., Gamble, L., Griffe, L., Franco Orozco, B., Ruiz, O., Munsterkotter, M., Looseley, M., Knogge, W., Newton, A., Birch, P., Hammond-Kosack, K. E. and Kanyuka, K. 2014. Rhynchosporium commune effectors identification and exploitation. Abstracts 1st International Workshop on Barley Leaf Diseases, Salsomaggiore Terme, 3-6 June 2014 .

Identification of Rhynchosporium commune avirulence genes through genome wide association and their recognition by the host plant barley

C2 - Non-edited contributions to conferences

Avrova, A., Gamble, L., Griffe, L., Franco Orozco, B., Ruiz, O., Munsterkotter, M., Knogge, W., Newton, A., Hammond-Kosack, K. E. and Kanyuka, K. 2014. Identification of Rhynchosporium commune avirulence genes through genome wide association and their recognition by the host plant barley. Abstracts 10th International Mycological Congress, Bangkok, 3-8 August 2014 .

From Rhynchosporium commune genome sequence to barley resistance

C2 - Non-edited contributions to conferences

Avrova, A., Gamble, L., Griffe, L., Ruiz, O., Munsterkotter, M., Knogge, W., Newton, A., Birch, P. R. J., Hammond-Kosack, K. E. and Kanyuka, K. 2014. From Rhynchosporium commune genome sequence to barley resistance. Abstracts Crop Protection in Northern Britain, Dundee, 25-26 February 2014 .

Identifying variation in resistance to the take-all fungus, Gaeumannomyces graminis var. tritici, between different ancestral and modern wheat species

A - Papers appearing in refereed journals

Mcmillan, V. E., Gutteridge, R. J. and Hammond-Kosack, K. E. 2014. Identifying variation in resistance to the take-all fungus, Gaeumannomyces graminis var. tritici, between different ancestral and modern wheat species. BMC Plant Biology. 14, p. 212. https://doi.org/10.1186/s12870-014-0212-8

Biotechnology: plant protection

B - Book chapters etc edited externally

Hammond-Kosack, K. E. 2014. Biotechnology: plant protection. in: Vanalfen, N. K. (ed.) Encyclopedia of agriculture and food systems, Vol. 2 Elsevier, San Diego. pp. 134-152

The role of chitin signalling in defence against Zymoseptoria tritici in wheat

C2 - Non-edited contributions to conferences

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2014. The role of chitin signalling in defence against Zymoseptoria tritici in wheat. Abstracts Monogram Network Meeting, Reading,27-28 March 2014 .

WGIN Stakeholders' Newsletter [April 2014]

G - Articles in popular magazines and other technical publications

Hammond-Kosack, K. E., Hawkesford, M. J., Mcmillan, V. E., Hammond-Kosack, M., Shepherd, G., Griffiths, S. and Foulkes, J. 2014. WGIN Stakeholders' Newsletter [April 2014]. WGIN Stakeholders' Newsletter. April.

Functional characterisation of members of the cytochrome B5 reductase gene family in the wheat-infecting fungus Zymoseptoria tritici

C2 - Non-edited contributions to conferences

Derbyshire, M., Courbot, M., Hammond-Kosack, K. E., Michaelson, L. V., Parker, J., Thacker, U., Li, N., Bailey, A. and Rudd, J. J. 2014. Functional characterisation of members of the cytochrome B5 reductase gene family in the wheat-infecting fungus Zymoseptoria tritici. Abstracts Meeting on Molecular Biology of Plant Pathogens, Reading, 26-27 March 2014 .

Genetic analyses of BaMMV/BaYMV resistance in barley accession HOR4224 result in the identification of an allele of the translation initiation factor 4e (Hv-eIF4E) exclusively effective against Barley mild mosaic virus (BaMMV)

A - Papers appearing in refereed journals

Perovic, D., Kramer, I., Habekuss, A., Perner, K., Pickering, R., Proeseler, G., Kanyuka, K. and Ordon, F. 2014. Genetic analyses of BaMMV/BaYMV resistance in barley accession HOR4224 result in the identification of an allele of the translation initiation factor 4e (Hv-eIF4E) exclusively effective against Barley mild mosaic virus (BaMMV). Theoretical and Applied Genetics. 127, pp. 1061-1071. https://doi.org/10.1007/s00122-014-2279-x

Mycosphaerella graminicola LysM effector-mediated stealth pathogenesis subverts recognition through both CERK1 and CEBiP homologues in wheat

A - Papers appearing in refereed journals

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2014. Mycosphaerella graminicola LysM effector-mediated stealth pathogenesis subverts recognition through both CERK1 and CEBiP homologues in wheat. Molecular Plant-Microbe Interactions - MPMI. 27 (3), pp. 236-243. https://doi.org/10.1094/MPMI-07-13-0201-R

Virus-induced gene silencing as a useful tool for functional genomics in wheat

C2 - Non-edited contributions to conferences

Kanyuka, K. 2014. Virus-induced gene silencing as a useful tool for functional genomics in wheat. International Conference on Translational Cereal Genomics, Vienna, 9-11 February 2014 . pp. 22

Detection, Occurrence, and Survey of Rice Stripe and Black-Streaked Dwarf Diseases in Zhejiang Province, China

A - Papers appearing in refereed journals

Zhang, H-M., Wang, H-D., Yang, J., Adams, M. J. and Chen, J-P. 2013. Detection, Occurrence, and Survey of Rice Stripe and Black-Streaked Dwarf Diseases in Zhejiang Province, China. Rice Science. 20 (6), pp. 383-390. https://doi.org/10.1016/S1672-6308(13)60158-4

New developments in identification and quantification of airborne inoculum

C2 - Non-edited contributions to conferences

West, J. S., Heard, S., Canning, G., Fraaije, B. A. and Hammond-Kosack, K. E. 2013. New developments in identification and quantification of airborne inoculum.

Recently agreed changes to the International Code of Virus Classification and Nomenclature

A - Papers appearing in refereed journals

Adams, M. J., Lefkowitz, E. J., King, A. M. Q. and Carstens, E. B. 2013. Recently agreed changes to the International Code of Virus Classification and Nomenclature. Archives of Virology. 158 (12), pp. 2633-2639. https://doi.org/10.1007/s00705-013-1749-9

Utilising virus-induced gene silencing (VIGS) to dissect cereal plant-fungal interactions

C2 - Non-edited contributions to conferences

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2013. Utilising virus-induced gene silencing (VIGS) to dissect cereal plant-fungal interactions. Abstracts EMBO Workshop on Green Viruses, from Gene to Landscape, Hyeres-les-Palmiers, 7-11 September 2013 . pp. 79

BSMV-VOX: a virus mediated transient expression tool that enables functional characterisation of small heterologous proteins in planta

C2 - Non-edited contributions to conferences

Kanyuka, K., Ruiz, O., Rudd, J. J., Avrova, A. and Hammond-Kosack, K. E. 2013. BSMV-VOX: a virus mediated transient expression tool that enables functional characterisation of small heterologous proteins in planta. Abstracts BBSRC Crop Improvement Research Club 5th Dissemination Event, Edinburgh, 11-12 December 2013 .

Identification and characterisation of effectors from barley pathogen Rhynchosporium commune

C2 - Non-edited contributions to conferences

Griffe, L., Gamble, L., Lynott, J., Munsterkotter, M., Knogge, W., Newton, A., Hein, I., Birch, P., Kanyuka, K. and Avrova, A. 2013. Identification and characterisation of effectors from barley pathogen Rhynchosporium commune. Abstracts BBSRC Crop Improvement Research Club 4th Dissemination Event, Cambridge, 15-16 May 2013 .

Characterisation of effectors from barley pathogen Rhynchosporium commune

C2 - Non-edited contributions to conferences

Griffe, L., Gamble, L., Berepiki, A., Munsterkotter, M., Knogge, W., Newton, A., Hein, I., Birch, P., Kanyuka, K. and Avrova, A. 2013. Characterisation of effectors from barley pathogen Rhynchosporium commune. Abstracts BBSRC Crop Improvement Research Club 5th Dissemination Event, Edinburgh, 11-12 December 2013 .

Investigation of metabolic processes involved in the infection of wheat by Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Derbyshire, M., Bailey, A., Hammond-Kosack, K. E., Courbot, M. and Rudd, J. J. 2013. Investigation of metabolic processes involved in the infection of wheat by Mycosphaerella graminicola. Abstracts 5th Congress of European Microbiologists (FEMS), Leipzig, 21-25 July 2013 .

Identification and exploitation of effectors from barley fungal pathogen Rhynchosporium commune

C2 - Non-edited contributions to conferences

Avrova, A., Berepiki, A., Gamble, L., Griffe, L., Ruiz, O., Munsterkotter, M., Knogge, W., Newton, A., Birch, P., Hammond-Kosack, K. E. and Kanyuka, K. 2013. Identification and exploitation of effectors from barley fungal pathogen Rhynchosporium commune. Abstracts BBSRC Crop Improvement Research Club 5th Dissemination Event, Edinburgh, 11-12 December 2013 .

Comparative transcriptome analysis of single and double mutants of GPA1 and GCR1 reveals their combinatorial genomewide roles in G-protein signaling in Arabidopsis thaliana

C2 - Non-edited contributions to conferences

Chakraborty, N., Sharma, P., Kanyuka, K., Pathak, R. R., Pillai, B., Choudhury, D., Hooley, R. and Raghuram, N. 2013. Comparative transcriptome analysis of single and double mutants of GPA1 and GCR1 reveals their combinatorial genomewide roles in G-protein signaling in Arabidopsis thaliana. Abstracts Indraprastha International Conference on Biotechnology, New Delhi, 22-25 October 2013 . pp. 155-156

Identification and characterisation of effectors from barley pathogen Rhynchosporium commune

C2 - Non-edited contributions to conferences

Griffe, L., Gamble, L., Lynott, J., Munsterkotter, M., Knogge, W., Newton, A., Hein, I., Birch, P., Kanyuka, K. and Avrova, A. 2013. Identification and characterisation of effectors from barley pathogen Rhynchosporium commune. Abstracts Effectome 2013, Montpelier, 25-27 September 2013 .

Modulation and manipulation of plant defences by Mycosphaerella graminicola during wheat infection

C2 - Non-edited contributions to conferences

Kanyuka, K., Lee, W-S., Hammond-Kosack, K. E. and Rudd, J. J. 2013. Modulation and manipulation of plant defences by Mycosphaerella graminicola during wheat infection. Abstracts 12th International Wheat Genetics Symposium (IWGS), Yokohama, 8-14 September 2013 .

Identification and exploitation of effectors from barley fungal pathogen Rhynchosporium commune

C2 - Non-edited contributions to conferences

Avrova, A., Gamble, L., Griffe, L., Ruiz, O., Munsterkotter, M., Knogge, W., Newton, A., Birch, P., Hammond-Kosack, K. E. and Kanyuka, K. 2013. Identification and exploitation of effectors from barley fungal pathogen Rhynchosporium commune. Abstracts 1st Annual Meeting COST Action FA 1208 Pathogen-informed Strategies for Sustainable Broad-Spectrum Crop Resistance, Birnam, 9-11 October 2013 .

Genus-specific CYP51C of Fusarium graminearum identified as a novel CYP51 rather than azole fungicide target sterol 14alpha-demethylases

C2 - Non-edited contributions to conferences

Fan, J., Urban, M., Parker, J. E., Brewer, H. C., Kelly, S. L., Hammond-Kosack, K. E., Fraaije, B. A., Liu, X. and Cools, H. J. 2013. Genus-specific CYP51C of Fusarium graminearum identified as a novel CYP51 rather than azole fungicide target sterol 14alpha-demethylases. Chinese Society for Plant Pathology.

Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2013)

A - Papers appearing in refereed journals

Adams, M. J., King, A. M. Q. and Carstens, E. B. 2013. Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2013). Archives of Virology. 158, pp. 2023-2030. https://doi.org/10.1007/s00705-013-1688-5

Selection pressure and founder effects constrain genetic variation in differentiated populations of soilborne bymovirus Wheat yellow mosiac virus (Potyviridae) in China

A - Papers appearing in refereed journals

Sun, B-J., Sun, L-Y., Tugume, A. K., Adams, M. J., Yang, J., Xie, L-H. and Chen, J-P. 2013. Selection pressure and founder effects constrain genetic variation in differentiated populations of soilborne bymovirus Wheat yellow mosiac virus (Potyviridae) in China. Phytopathology. 103 (9), pp. 949-959. https://doi.org/10.1094/PHYTO-01-13-0013-R

Utilising virus-induced gene silencing (VIGS) to dissect plant defence signalling and the underlying plant defence mechanisms in wheat and barley

C2 - Non-edited contributions to conferences

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2013. Utilising virus-induced gene silencing (VIGS) to dissect plant defence signalling and the underlying plant defence mechanisms in wheat and barley. Abstracts National Institutes of Bioscience Conference, Edinburgh, 18-19 June 2013 .

Genomic clustering and co-regulation of transcriptional networks in the pathogenic fungus Fusarium graminearum

A - Papers appearing in refereed journals

Lawler, K., Hammond-Kosack, K. E., Brazma, A. and Coulson, R. M. R. 2013. Genomic clustering and co-regulation of transcriptional networks in the pathogenic fungus Fusarium graminearum. BMC Systems Biology. 7, p. 52. https://doi.org/10.1186/1752-0509-7-52

BSMV-VOX: a virus mediated transient expression tool that enables the functional characterisation of small heterologous proteins in planta

C2 - Non-edited contributions to conferences

Kanyuka, K., Ruiz, O., Rudd, J. J., Avrova, A. and Hammond-Kosack, K. E. 2013. BSMV-VOX: a virus mediated transient expression tool that enables the functional characterisation of small heterologous proteins in planta. Abstracts National Institutes of Bioscience Conference, Edinburgh, 18-20 June 2013 .

Molecular genetics and genomic approaches to explore Fusarium infection of wheat floral tissue

B - Book chapters etc edited externally

Urban, M. and Hammond-Kosack, K. E. 2013. Molecular genetics and genomic approaches to explore Fusarium infection of wheat floral tissue. in: Brown, D. W. and Proctor, R. H. (ed.) Fusarium: genomics, molecular and cellular biology Caister Academic Press, Norwich, Norfolk. pp. 43-79

Ribosomal DNA analyses reveal greater sequence variation in Polymyxa species than previously thought and indicate the possibility of new ribotype-host-virus associations

A - Papers appearing in refereed journals

Smith, M. J., Adams, M. J. and Ward, E. 2013. Ribosomal DNA analyses reveal greater sequence variation in Polymyxa species than previously thought and indicate the possibility of new ribotype-host-virus associations. Environmental Microbiology Reports. 5 (1), pp. 143-150. https://doi.org/10.1111/1758-2229.12026

Network-based data integration for selecting candidate virulence associated proteins in the cereal infecting fungus Fusarium graminearum

A - Papers appearing in refereed journals

Lysenko, A., Urban, M., Bennett, L., Tsoka, S., Janowska-Sejda, E., Rawlings, C. J., Hammond-Kosack, K. E. and Saqi, M. 2013. Network-based data integration for selecting candidate virulence associated proteins in the cereal infecting fungus Fusarium graminearum. PLOS ONE. 8, p. e67926. https://doi.org/10.1371/journal.pone.0067926

Using the phenotypic information in the PHI-base database to explore pathogen genomes, transcriptomes and proteomes

C2 - Non-edited contributions to conferences

Urban, M., Antoniw, J. F., Martins, N., Lysenko, A., Grzebyta, J., Janowska-Sedja, E., Saqi, M. and Hammond-Kosack, K. E. 2013. Using the phenotypic information in the PHI-base database to explore pathogen genomes, transcriptomes and proteomes. Abstracts 27th Fungal Genetics Conference, Asilomar, 12-17 March 2013 . pp. 177

Exploring the metabolome of cereal infecting fusaria

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Lowe, R. G. T., Canning, G., Urban, M., Beale, M. H. and Ward, J. L. 2013. Exploring the metabolome of cereal infecting fusaria. Abstracts 27th Fungal Genetics Conference, Asilomar, 12-17 March 2013 . pp. 21

Characterisation of stuA homologue in Fusarium culmorum

C2 - Non-edited contributions to conferences

Pasquali, M., Spanu, F., Balmas, V., Scherm, B., Hammond-Kosack, K. E., Hoffmann, L., Beyer, M. and Migheli, Q. 2013. Characterisation of stuA homologue in Fusarium culmorum. Abstracts 27th Fungal Genetics Conference, Asilomar, 12-17 March 2013 . pp. 185

FcStuA from Fusarium culmorum controls wheat foot and root rot in a toxin dispensable manner

A - Papers appearing in refereed journals

Pasquali, M., Spanu, F., Scherm, B., Balmas, V., Hoffmann, L., Hammond-Kosack, K. E., Beyer, M. and Migheli, Q. 2013. FcStuA from Fusarium culmorum controls wheat foot and root rot in a toxin dispensable manner. PLOS ONE. 8, p. e57429 (14pp). https://doi.org/10.1371/journal.pone.0057429

One fungus, one name: defining the genus Fusarium in a scientifically robust way that preserves longstanding use

A - Papers appearing in refereed journals

Geiser, D. M., Aoki, T., Bacon, C. W., Baker, S. E., Bhattacharyya, M. K., Brandt, M. E., Brown, D. W., Burgess, L. W., Chulze, S., Coleman, J. J., Correll, J. C., Covert, S. F., Crous, P. W., Cuomo, C. A., De Hoog, G. S., Di Pietro, A., Elmer, W. H., Epstein, L., Frandsen, R. J. N., Freeman, S., Gagkaeva, T., Glenn, A. E., Gordon, T. R., Gregory, N. F. and Hammond-Kosack, K. E. 2013. One fungus, one name: defining the genus Fusarium in a scientifically robust way that preserves longstanding use. Phytopathology. 103 (5), pp. 400-408. https://doi.org/10.1094/PHYTO-07-12-0150-LE

Characterization of the sterol 14alpha-demethylases of Fusarium graminearum identifies a novel genus-specific CYP51 function

A - Papers appearing in refereed journals

Fan, J., Urban, M., Parker, J. E., Brewer, H. C., Kelly, S. L., Hammond-Kosack, K. E., Fraaije, B. A., Liu, X. and Cools, H. J. 2013. Characterization of the sterol 14alpha-demethylases of Fusarium graminearum identifies a novel genus-specific CYP51 function. New Phytologist. 198 (3), pp. 821-835. https://doi.org/10.1111/nph.12193

Exploitation of genomics in fungicide research: current status and future perspectives

A - Papers appearing in refereed journals

Cools, H. J. and Hammond-Kosack, K. E. 2013. Exploitation of genomics in fungicide research: current status and future perspectives. Molecular Plant Pathology. 14 (2), pp. 197-210. https://doi.org/10.1111/mpp.12001

Detection of multi-clustered genes and community structure for the plant pathogenic fungus Fusarium graminearum

B - Book chapters etc edited externally

Bennett, L., Lysenko, A., Papageorgiou, L. G., Urban, M., Hammond-Kosack, K. E., Rawlings, C. J., Saqi, M. and Tsoka, S. 2012. Detection of multi-clustered genes and community structure for the plant pathogenic fungus Fusarium graminearum. in: Gilbert, D. and Heiner, M. (ed.) Computational Methods in Systems Biology Springer-Verlag Berlin Heidelberg.

Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2012)

A - Papers appearing in refereed journals

Adams, M. J. and Carstens, E. B. 2012. Ratification vote on taxonomic proposals to the International Committee on Taxonomy of Viruses (2012). Archives of Virology. 157, pp. 1411-1422. https://doi.org/10.1007/s00705-012-1299-6

Genomic approaches to analysing disease caused by plant pathogenic Mycosphaerella species

C2 - Non-edited contributions to conferences

Lucas, J. A., Amaral, A., Hammond-Kosack, K. E. and Rudd, J. J. 2012. Genomic approaches to analysing disease caused by plant pathogenic Mycosphaerella species. Abstracts 4th Brazilian Congress of Biotechnology, Guaruja, 28 October - 1 November 2012 . pp. 30

Isolation and characterisation of FcStuA in Fusarium culmorum, causal agent of foot crown rot

C2 - Non-edited contributions to conferences

Pasquali, M., Spanu, F., Balmas, V., Scherm, B., Hoffmann, L., Hammond-Kosack, K. E., Beyer, M. and Migheli, Q. 2012. Isolation and characterisation of FcStuA in Fusarium culmorum, causal agent of foot crown rot. Abstracts 11th European Conference on Fungal Genetics, Marburg, 30 March - 2 April 2012 . pp. 98

Shouldn't enantiomeric purity be included in the minimum information about a bioactive entity? Response from the MIABE group

G - Articles in popular magazines and other technical publications

Orchard, S., Al-Lazikani, B., Bryant, S., Clark, D., Calder, E., Dix, I., Engkvist, O., Forster, M., Gaulton, A., Gilson, M., Glen, R., Grigorov, M., Hammond-Kosack, K. E., Harland, L., Hopkins, A., Larminie, C., Lynch, N., Mann, R. K., Murray-Rust, P., Lo Piparo, E., Southan, C., Steinbeck, C., Wishart, D., Hermjakob, H., Overington, J. and Thornton, J. 2012. Shouldn't enantiomeric purity be included in the minimum information about a bioactive entity? Response from the MIABE group. Nature Reviews Drug Discovery. 10, p. 661. https://doi.org/10.1038/nrd3503-c2

Estudos avancados para deteccao de genes diferencialmente expressos em trigo infectado por Fusarium graminearum

C2 - Non-edited contributions to conferences

Martins, N. F. and Hammond-Kosack, K. E. 2012. Estudos avancados para deteccao de genes diferencialmente expressos em trigo infectado por Fusarium graminearum. Abstracts 1st Meeting EMBRAPA Researchers and Engineers in Europe, Montpellier, 18 October 2012 .

Barley stripe mosaic virus- mediated tools for investigating gene function in cereal plants and their pathogens: virus-induced gene silencing, host-mediated gene silencing and virus-mediated overexpression of heterologous protein

A - Papers appearing in refereed journals

Lee, W-S., Hammond-Kosack, K. E. and Kanyuka, K. 2012. Barley stripe mosaic virus- mediated tools for investigating gene function in cereal plants and their pathogens: virus-induced gene silencing, host-mediated gene silencing and virus-mediated overexpression of heterologous protein. Plant Physiology. 160, pp. 582-590. https://doi.org/10.1104/pp.112.203489

Phytopath - A new bioinformatics resource for plant pathogens

C2 - Non-edited contributions to conferences

Pedro, H., Grzebyta, J., Urban, M., Saqi, M., Kerhornou, A., Maheswari, U., Kersey, P. and Hammond-Kosack, K. E. 2012. Phytopath - A new bioinformatics resource for plant pathogens. Abstracts 11th European Conference on Fungal Genetics, Marburg, 30 March - 2 April 2012 . pp. 138

Defining the predicted protein secretome of the fungal wheat leaf pathogen Mycosphaerella graminicola

A - Papers appearing in refereed journals

Do Amaral, A. M., Antoniw, J. F., Rudd, J. J. and Hammond-Kosack, K. E. 2012. Defining the predicted protein secretome of the fungal wheat leaf pathogen Mycosphaerella graminicola. PLOS ONE. 7, p. e49904 (19 pp). https://doi.org/10.1371/journal.pone.0049904

A refinement of the predicted secretome for the wheat leaf pathogen Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Do Amaral, A. M., Antoniw, J. F., Rudd, J. J. and Hammond-Kosack, K. E. 2012. A refinement of the predicted secretome for the wheat leaf pathogen Mycosphaerella graminicola. Abstracts IS-MPMI 2012 15th International Congress, Kyoto, 29 July - 2 August 2012 . pp. 104

Virus-induced gene silencing as a tool to study wheat gene function in the interaction with the pathogenic fungus Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Lee, W-S., Marshall, R., Hammond-Kosack, K. E., Rudd, J. J. and Kanyuka, K. 2012. Virus-induced gene silencing as a tool to study wheat gene function in the interaction with the pathogenic fungus Mycosphaerella graminicola. Abstracts Plant Biology Congress, Freiburg, 29 July-3 August 2012 . pp. 709

Phytopath: new pathogen resource launched

G - Articles in popular magazines and other technical publications

Kersey, P., Pedro, H., Maheswari, U., Hammond-Kosack, K. E., Urban, M., Saqi, M. and Grzebyta, J. 2012. Phytopath: new pathogen resource launched. GARNish Newsletter. 17, p. 8.

The role of chitin signalling in the wheat - M. graminicola interaction

C2 - Non-edited contributions to conferences

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2012. The role of chitin signalling in the wheat - M. graminicola interaction. Abstracts Rank Prize Funds Mini-Symposium on New Horizons in Plant-Pathogen Interactions, Grasmere, 30 April-3 May 2012 .

Chromosomal evolutionary processes in filamentous fungi: macrosynteny and mesosynteny in basidiomycetes and concatenated ascomycete genomes

C2 - Non-edited contributions to conferences

Oliver, R. P., Williams, A., Antoniw, J. F. and Hammond-Kosack, K. E. 2012. Chromosomal evolutionary processes in filamentous fungi: macrosynteny and mesosynteny in basidiomycetes and concatenated ascomycete genomes. Abstracts Dothideomycetes Satellite Meeting, Marburg, 3 April 2012 .

The role of chitin signalling in the wheat - M. graminicola interaction

C2 - Non-edited contributions to conferences

Lee, W-S., Rudd, J. J., Hammond-Kosack, K. E. and Kanyuka, K. 2012. The role of chitin signalling in the wheat - M. graminicola interaction. Abstracts Molecular Biology of Plant Pathogens, Reading, 16-17 April 2012 .

Exploring the early symptomless phase of Fusarium graminearum infection of wheat ears

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Brown, N. A., Urban, M. and Antoniw, J. F. 2012. Exploring the early symptomless phase of Fusarium graminearum infection of wheat ears. Abstracts 11th European Conference on Fungal Genetics, Marburg, 30 March - 2 April 2012 . pp. 74

Functional characterisation of Cytochrome P450 genes from the wheat leaf pathogen Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Derbyshire, M., Bailey, A., Hammond-Kosack, K. E., Courbot, M. and Rudd, J. J. 2012. Functional characterisation of Cytochrome P450 genes from the wheat leaf pathogen Mycosphaerella graminicola. Abstracts 11th European Conference on Fungal Genetics, Marburg, 30 March - 2 April 2012 . pp. 233

The top 10 fungal pathogens in molecular plant pathology

A - Papers appearing in refereed journals

Dean, R., Van Kan, J. A. L., Pretorius, Z. A., Hammond-Kosack, K. E., Di Pietro, A., Spanu, P. D., Rudd, J. J., Dickman, M., Kahmann, R., Ellis, J. and Foster, G. D. 2012. The top 10 fungal pathogens in molecular plant pathology. Molecular Plant Pathology. 13 (4), pp. 414-430. https://doi.org/10.1111/j.1364-3703.2011.00783.x

The velvet gene, FgVe1, affects fungal development and positively regulates trichothecene biosynthesis and pathogenicity in Fusarium graminearum

A - Papers appearing in refereed journals

Merhej, J., Urban, M., Dufresne, M., Hammond-Kosack, K. E., Richard-Forget, F. and Barreau, C. 2012. The velvet gene, FgVe1, affects fungal development and positively regulates trichothecene biosynthesis and pathogenicity in Fusarium graminearum. Molecular Plant Pathology. 13 (4), pp. 363-374. https://doi.org/10.1111/j.1364-3703.2011.00755.x

The predicted secretome of the plant pathogenic fungus Fusarium graminearum: a refined comparative analysis

A - Papers appearing in refereed journals

Brown, N. A., Antoniw, J. F. and Hammond-Kosack, K. E. 2012. The predicted secretome of the plant pathogenic fungus Fusarium graminearum: a refined comparative analysis. PLOS ONE. 7, p. e33731 (14pp). https://doi.org/10.1371/journal.pone.0033731

Confidential report to Syngenta, January 2012

D1 - Technical reports: non-confidential

Mcmillan, V. E., Hammond-Kosack, K. E. and Gutteridge, R. J. 2012. Confidential report to Syngenta, January 2012.

The induction of mycotoxins by trichothecene producing Fusarium species

B - Book chapters etc edited externally

Lowe, R., Jubault, M., Canning, G., Urban, M. and Hammond-Kosack, K. E. 2012. The induction of mycotoxins by trichothecene producing Fusarium species. in: Thomma, B. P. H. J. and Bolton, M. D. (ed.) Plant fungal pathogens: methods and protocols (Methods in Molecular Biology, Vol 835) Springer, Berlin. pp. 439-455

Virus-induced gene silencing system for functional genomics studies in wheat and related cereals

C2 - Non-edited contributions to conferences

Lee, W-S., Hammond-Kosack, K. E. and Kanyuka, K. 2011. Virus-induced gene silencing system for functional genomics studies in wheat and related cereals. Abstracts UK Monogram Network Workshop, Sutton Bonington, 11-13 April 2011 . pp. 14

WGIN Stakeholder's Newsletter [November 2011]

G - Articles in popular magazines and other technical publications

Hammond-Kosack, K. E. 2011. WGIN Stakeholder's Newsletter [November 2011]. WGIN Stakeholders' Newsletter. November.

Reducing take-all inoculum build-up during a first wheat crop

C2 - Non-edited contributions to conferences

Mcmillan, V. E., Hammond-Kosack, K. E., Kanyuka, K. and Gutteridge, R. 2011. Reducing take-all inoculum build-up during a first wheat crop. APS-IPPC Joint Meeting, Tampa, Florida, USA, 30 July -3 August 2011. American Phytopathological Society (APS).

OmniMapFree a unified tool to visualise and explore sequenced genomes

A - Papers appearing in refereed journals

Antoniw, J. F., Beacham, A. M., Baldwin, T. K., Urban, M., Rudd, J. J. and Hammond-Kosack, K. E. 2011. OmniMapFree a unified tool to visualise and explore sequenced genomes. BMC Bioinformatics. 12, p. 447 (14pp). https://doi.org/10.1186/1471-2105-12-447

Characterisation of the Fusarium graminearum-wheat floral interaction

A - Papers appearing in refereed journals

Brown, N. A., Bass, C. G., Baldwin, T. K., Chen, Huaigu, Massot, F., Carion, P. W. C., Urban, M., Van De Meene, A. M. L. and Hammond-Kosack, K. E. 2011. Characterisation of the Fusarium graminearum-wheat floral interaction. Journal of Pathogens. 2011, p. 626345. https://doi.org/10.4061/2011/626345

Minimum information about a bioactive entity (MIABE)

A - Papers appearing in refereed journals

Orchard, S., Al-Lazikani, B., Bryant, S., Clark, D., Calder, E., Dix, I., Engkvist, O., Forster, M., Gaulton, A., Gilson, M., Glen, R., Grigorov, M., Hammond-Kosack, K. E., Harland, L., Hopkins, A., Larminie, C., Lynch, N., Mann, R. K., Murray-Rust, P., Lo Piparo, E., Southan, C., Steinbeck, C., Wishart, D., Hermjakob, H., Overington, J. and Thornton, J. 2011. Minimum information about a bioactive entity (MIABE). Nature Reviews Drug Discovery. 10, pp. 661-669. https://doi.org/10.1038/nrd3503

Garlic virus X 11-kDa protein granules move within the cytoplasm and traffic a host protein normally found in the nucleolus

A - Papers appearing in refereed journals

Lu, Y., Yan, F., Guo, W., Zheng, H., Lin, L., Peng, J., Adams, M. J. and Chen, J. 2011. Garlic virus X 11-kDa protein granules move within the cytoplasm and traffic a host protein normally found in the nucleolus. Molecular Plant Pathology. 12 (7), pp. 666-676. https://doi.org/10.1111/J.1364-3703.2010.00699.X

An exceptionally high nucleotide and haplotype diversity and a signature of positive selection for the eIF4E resistance gene in barley are revealed by allele mining and phylogenetic analyses of natural populations

A - Papers appearing in refereed journals

Hofinger, B. J., Russell, J. R., Bass, C. G., Baldwin, T., Dos Reis, M., Hedley, P. E., Li, Y., Macaulay, M., Waugh, R., Hammond-Kosack, K. E. and Kanyuka, K. 2011. An exceptionally high nucleotide and haplotype diversity and a signature of positive selection for the eIF4E resistance gene in barley are revealed by allele mining and phylogenetic analyses of natural populations. Molecular Ecology. 20 (17), pp. 3653-3668. https://doi.org/10.1111/j.1365-294X.2011.05201.x

Aberrant protein N- glycosylation impacts upon infection-related growth transitions of the haploid plant-pathogenic fungus Mycosphaerella graminicola

A - Papers appearing in refereed journals

Motteram, J., Lovegrove, A., Pirie, E. J., Marsh, J., Devonshire, J., Van De Meene, A., Hammond-Kosack, K. E. and Rudd, J. J. 2011. Aberrant protein N- glycosylation impacts upon infection-related growth transitions of the haploid plant-pathogenic fungus Mycosphaerella graminicola. Molecular Microbiology. 81 (2), pp. 415-433. https://doi.org/10.1111/j.1365-2958.2011.07701.x

Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity and stealth pathogenesis

A - Papers appearing in refereed journals

Goodwin, S. B., Ben M'barek, S., Dhillon, B., Wittenberg, A. H. J., Crane, C. F., Hane, J. K., Foster, A. J., Van Der Lee, T. A. J., Grimwood, J., Aerts, A., Antoniw, J. F., Bailey, A., Bluhm, B., Bowler, J., Bristow, J., Van Der Burgt, A., Canto-Canche, B., Churchill, A. C. L., Conde-Ferraez, L., Cools, H. J., Coutinho, P. M., Csukai, M., Dehal, P., De Wit, P., Donzelli, B., Van De Geest, H. C., Van Ham, R. C. H. J., Hammond-Kosack, K. E. and Rudd, J. J. 2011. Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity and stealth pathogenesis. PLOS Genetics. 7, p. e1002070 (17pp). https://doi.org/10.1371/journal.pgen.1002070

Analysis of two in planta expressed LysM effector homologs from the fungus Mycosphaerella graminicola reveals novel functional properties and varying contributions to virulence on wheat

A - Papers appearing in refereed journals

Marshall, R., Kombrink, A., Motteram, J., Loza-Reyes, E., Lucas, J. A., Hammond-Kosack, K. E., Thomma, B. P. H. J. and Rudd, J. J. 2011. Analysis of two in planta expressed LysM effector homologs from the fungus Mycosphaerella graminicola reveals novel functional properties and varying contributions to virulence on wheat. Plant Physiology. 156, pp. 756-769. https://doi.org/10.1104/pp.111.176347

Infection of the wheat ear by the fungus Fusarium culmorum

C2 - Non-edited contributions to conferences

Van De Meene, A., Urban, M., Brown, N. A. and Hammond-Kosack, K. E. 2011. Infection of the wheat ear by the fungus Fusarium culmorum. Abstracts Botanical Microscopy Conference, Wageningen, 16-21 April 2011 .

Evidence that Polymyxa species may infect Arabidopsis thaliana

A - Papers appearing in refereed journals

Smith, M. J., Adams, M. J. and Ward, E. 2011. Evidence that Polymyxa species may infect Arabidopsis thaliana. FEMS Microbiology Letters. 318 (1), pp. 35-40. https://doi.org/10.1111/j.1574-6968.2011.02236.x

A new approach to reduce the risk of Take-all disease

G - Articles in popular magazines and other technical publications

Mcmillan, V. E., Hammond-Kosack, K. E., Kanyuka, K. and Gutteridge, R. J. 2011. A new approach to reduce the risk of Take-all disease. RRA Newsletter. April, pp. 1-2.

Investigation of soilborne mosaic virus diseases transmitted by Polymyxa graminis in cereal production areas of the Anatolian part of Turkey

A - Papers appearing in refereed journals

Yilmaz, N. D. K., Lyons, R. L., Smith, M. J. and Kanyuka, K. 2011. Investigation of soilborne mosaic virus diseases transmitted by Polymyxa graminis in cereal production areas of the Anatolian part of Turkey. European Journal of Plant Pathology. 130, pp. 59-72. https://doi.org/10.1007/s10658-010-9731-9

Evidence that wheat cultivars differ in their ability to build up inoculum of the take-all fungus, Gaeumannomyces graminis var. tritici, under a first wheat crop

A - Papers appearing in refereed journals

Mcmillan, V. E., Hammond-Kosack, K. E. and Gutteridge, R. J. 2011. Evidence that wheat cultivars differ in their ability to build up inoculum of the take-all fungus, Gaeumannomyces graminis var. tritici, under a first wheat crop. Plant Pathology. 60 (2), pp. 200-206. https://doi.org/10.1111/j.1365-3059.2010.02375.x

The unseen threat of symptomless Fusarium wheat ear infection

C1 - Edited contributions to conferences/learned societies

Brown, N. A., Bass, C. G., Urban, M., Van De Meene, A. and Hammond-Kosack, K. E. 2011. The unseen threat of symptomless Fusarium wheat ear infection. Crop protection in Southern Britain. Aspects of Applied Biology 106 . pp. 143-149

Inactivation of plant infecting fungal and viral pathogens to achieve biological containment in drainage water using UV treatment

A - Papers appearing in refereed journals

Urban, M., Motteram, J., Jing, H-C., Powers, S. J., Townsend, J. A., Devonshire, J., Pearman, I., Kanyuka, K., Franklin, J. F. and Hammond-Kosack, K. E. 2011. Inactivation of plant infecting fungal and viral pathogens to achieve biological containment in drainage water using UV treatment. Journal of Applied Microbiology. 110 (3), pp. 675-687. https://doi.org/10.1111/j.1365-2672.2010.04917.x

The complex interactions between host immunity and non-biotrophic fungal pathogens of wheat leaves

A - Papers appearing in refereed journals

Deller, S., Hammond-Kosack, K. E. and Rudd, J. J. 2011. The complex interactions between host immunity and non-biotrophic fungal pathogens of wheat leaves. Journal of Plant Physiology. 168, pp. 63-71. https://doi.org/10.1016/j.jplph.2010.05.024

Identification and characterization of novel natural alleles of eIF4E in barley providing broad-spectrum resistance to bymoviruses

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C., Baldwin, T., Jing, H-C., Beaudoin, F., Hammond-Kosack, K. E. and Kanyuka, K. 2010. Identification and characterization of novel natural alleles of eIF4E in barley providing broad-spectrum resistance to bymoviruses. Antoun, H., Trepanier, M., Prevost, D., Brisson, L. and Avis, T. (ed.) Biology of plant-microbe interactions, vol. 7 . International Society for Molecular Plant-Microbe Interactions, St. Paul. pp. Paper 71

The unseen threat to UK wheat production from Fusarium ear blight

C2 - Non-edited contributions to conferences

Brown, N. A., Bass, C. G., Urban, M., Van De Meene, A. and Hammond-Kosack, K. E. 2010. The unseen threat to UK wheat production from Fusarium ear blight. Abstracts CropWorld, London, 1-3 November 2010 .

Be more specific! Using laser capture micro-dissection to investigate Fusarium ear blight

C2 - Non-edited contributions to conferences

Brown, N. A., Urban, M., Van De Meene, A. and Hammond-Kosack, K. E. 2010. Be more specific! Using laser capture micro-dissection to investigate Fusarium ear blight. Abstracts 9th International Mycological Congress: the Biology of Fungi, Edinburgh, 1-6 August 2010 .

A combined 1H nuclear magnetic resonance and electrospray ionization-mass spectrometry analysis to understand the basal metabolism of plant-pathogenic Fusarium spp

A - Papers appearing in refereed journals

Lowe, R. G. T., Allwood, J. W., Galster, A. M., Urban, M., Daudi, A., Canning, G., Ward, J. L., Beale, M. H. and Hammond-Kosack, K. E. 2010. A combined 1H nuclear magnetic resonance and electrospray ionization-mass spectrometry analysis to understand the basal metabolism of plant-pathogenic Fusarium spp. Molecular Plant-Microbe Interactions - MPMI. 23 (12), pp. 1605-1618. https://doi.org/10.1094/MPMI-04-10-0092

The complete genome sequence of two isolates of Southern rice black-streaked dwarf virus, a new member of the genus Fijivirus

A - Papers appearing in refereed journals

Wang, Q., Yang, J., Zhou, G-H., Zhang, H-M., Chen, J-P. and Adams, M. J. 2010. The complete genome sequence of two isolates of Southern rice black-streaked dwarf virus, a new member of the genus Fijivirus. Journal of Phytopathology. 158 (43080), pp. 733-737. https://doi.org/10.1111/j.1439-0434.2010.01679.x

The Fusaria

G - Articles in popular magazines and other technical publications

Hammond-Kosack, K. E. 2010. The Fusaria.

The infection biology of Fusarium graminearum: defining the pathways of spikelet to spikelet colonisation in wheat ears

A - Papers appearing in refereed journals

Brown, N. A., Urban, M., Van De Meene, A. M. L. and Hammond-Kosack, K. E. 2010. The infection biology of Fusarium graminearum: defining the pathways of spikelet to spikelet colonisation in wheat ears. Fungal Biology. 114 (7), pp. 555-571. https://doi.org/10.1016/j.funbio.2010.04.006

A partial chromosomal deletion caused by random plasmid integration resulted in a reduced virulence phenotype in Fusarium graminearum

A - Papers appearing in refereed journals

Baldwin, T. K., Gaffoor, I., Antoniw, J. F., Andries, C., Guenther, J., Urban, M., Hallen-Adams, H. E., Pitkin, J., Hammond-Kosack, K. E. and Trail, F. 2010. A partial chromosomal deletion caused by random plasmid integration resulted in a reduced virulence phenotype in Fusarium graminearum. Molecular Plant-Microbe Interactions - MPMI. 23 (8), pp. 1083-1096. https://doi.org/10.1094/MPMI-23-8-1083

Characterization of siRNAs derived from rice stripe virus in infected rice plants by deep sequencing

A - Papers appearing in refereed journals

Yan, F., Zhang, H., Adams, M. J., Yang, J., Peng, J., Antoniw, J. F., Zhou, Y. and Chen, J. 2010. Characterization of siRNAs derived from rice stripe virus in infected rice plants by deep sequencing. Archives of Virology. 155, pp. 935-940. https://doi.org/10.1007/s00705-010-0670-8

Molecular diversities of Sugarcane mosaic virus and Sorghum mosaic virus isolates from Yunnan Province, China

A - Papers appearing in refereed journals

Wang, J-G., Zheng, H-Y., Chen, H-R., Adams, M. J. and Chen, J-P. 2010. Molecular diversities of Sugarcane mosaic virus and Sorghum mosaic virus isolates from Yunnan Province, China. Journal of Phytopathology. 158 (6), pp. 427-432. https://doi.org/10.1111/j.1439-0434.2009.01642.x

The identification of a virulence factor-enriched micro-region in the Fusarium graminearum genome

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Antoniw, J. F., Freeman, A., Urban, M., Welham, S. J. and Beacham, A. 2010. The identification of a virulence factor-enriched micro-region in the Fusarium graminearum genome. Abstracts Fusarium Workshop, Amsterdam, 28-29 March 2010 .

A role for topoisomerase I in Fusarium graminearum and F. culmorum pathogenesis and sporulation

A - Papers appearing in refereed journals

Baldwin, T. K., Urban, M., Brown, N. A. and Hammond-Kosack, K. E. 2010. A role for topoisomerase I in Fusarium graminearum and F. culmorum pathogenesis and sporulation. Molecular Plant-Microbe Interactions - MPMI. 23 (5), pp. 566-577. https://doi.org/10.1094/MPMI-23-5-0566

Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium

A - Papers appearing in refereed journals

Ma, L-J., Van Der Does, H. C., Borkovich, K. A., Coleman, J. J., Daboussi, M-J., Di Pietro, A., Dufresne, M., Freitag, M., Grabherr, M., Henrissat, B., Houterman, P. M., Kang, S., Shim, W-B., Woloshuk, C., Xie, X., Xu, J-R., Antoniw, J. F., Baker, S. E., Bluhm, B. H., Breakspear, A., Brown, D. W., Butchko, R. A. E., Chapman, S., Coulson, R., Coutinho, P., Danchin, E. G. J., Diener, A., Gale, L. R. and Hammond-Kosack, K. E. 2010. Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. Nature. 464, pp. 367-373. https://doi.org/10.1038/nature08850

Zoosporic root colonizers

B - Book chapters etc edited externally

Adams, M. J. 2010. Zoosporic root colonizers. in: Bockus, W. W. (ed.) Compendium of wheat diseases and pests, 3rd ed American Phytopathological Society (APS). pp. 84-86

Plasmodiophorida

G - Articles in popular magazines and other technical publications

Ward, E. and Adams, M. J. 2010. Plasmodiophorida.

Soil-borne cereal mosaic virus (SBCMV) resistance gene Sbm1 (Online protocol)

D1 - Technical reports: non-confidential

Perovic, D., Kanyuka, K. and Ordon, F. 2010. Soil-borne cereal mosaic virus (SBCMV) resistance gene Sbm1 (Online protocol).

Identification and characterisation of Mycosphaerella graminicola secreted or surface-associated proteins with variable intragenic coding repeats

A - Papers appearing in refereed journals

Rudd, J. J., Antoniw, J. F., Marshall, R., Motteram, J., Fraaije, B. A. and Hammond-Kosack, K. E. 2010. Identification and characterisation of Mycosphaerella graminicola secreted or surface-associated proteins with variable intragenic coding repeats. Fungal Genetics and Biology. 47, pp. 19-32. https://doi.org/10.1016/j.fgb.2009.10.009

Pest wars - press paper

C2 - Non-edited contributions to conferences

Lucas, J. A., Field, L. M., Cools, H. J. and Hammond-Kosack, K. E. 2009. Pest wars - press paper. Pest Wars: British Science Festival, Guildford, 8 September 2009 .

Functional evaluation of plant defence signalling against Fusarium graminearum and F. culmorum in Arabidopsis floral tissue

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Freeman, A., Desmouceaux, N., Urban, M. and Cuzick, A. 2009. Functional evaluation of plant defence signalling against Fusarium graminearum and F. culmorum in Arabidopsis floral tissue. Abstracts 14th International Congress on Molecular Plant-Microbe Interactions, Quebec, 19-23 July 2009 .

Molecular and genetic studies on Fusarium Ear Blight disease of wheat

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Kanyuka, K., Brown, N. A., Beacham, A. M., Cuzick, A., Antoniw, J. F. and Urban, M. 2009. Molecular and genetic studies on Fusarium Ear Blight disease of wheat. Abstracts 2009 National Fusarium Head Blight Forum, Orlando, 7-9 December 2009 .

Exploiting natural genetic diversity of barley germplasm to identify superior alleles of eIF4E conferring broad-spectrum virus resistance

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C., Baldwin, T., Beaudoin, F., Hammond-Kosack, K. E. and Kanyuka, K. 2009. Exploiting natural genetic diversity of barley germplasm to identify superior alleles of eIF4E conferring broad-spectrum virus resistance. Abstracts Rank Prize Funds Mini-Symposium on Domestication of Cereals and Exploitation of Genetic Diversity in Improvement, Grasmere, 21-24 September 2009 .

A new rapid and relatively inexpensive method for mining in plant germplasm collections for novel alleles of agronomically important genes: a case study in barley

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C., Baldwin, T., Jing, H-C., Beaudoin, F., Hammond-Kosack, K. E. and Kanyuka, K. 2009. A new rapid and relatively inexpensive method for mining in plant germplasm collections for novel alleles of agronomically important genes: a case study in barley. Abstracts 19th ITMI/3rd COST Tritigen Joint Workshop, Clermont-Ferrand, 31 August-4 September 2009 . pp. 34

Identification and characterization of novel natural alleles of eIF4E in barley providing broad-spectrum resistance to Bymoviruses

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C., Baldwin, T., Jing, H-C., Beaudoin, F., Hammond-Kosack, K. E. and Kanyuka, K. 2009. Identification and characterization of novel natural alleles of eIF4E in barley providing broad-spectrum resistance to Bymoviruses. Abstracts 14th International Congress on Molecular Plant-Microbe Interactions, Quebec, 19-23 July 2009 . pp. 18

Exploiting the genetic diversity of natural barley germplasm for the discovery of novel eIF4E alleles conferring broad spectrum resistance to bymoviruses

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C., Baldwin, T., Beaudoin, F., Hammond-Kosack, K. E. and Kanyuka, K. 2009. Exploiting the genetic diversity of natural barley germplasm for the discovery of novel eIF4E alleles conferring broad spectrum resistance to bymoviruses. Abstracts International Conference on Advances in Plant Virology, Harrogate, 1-3 April 2009 .

Construction and establishment of a containment level 3 plant growth facility at Rothamsted Research

D1 - Technical reports: non-confidential

Hammond-Kosack, K. E., Urban, M., Franklin, J. F. and Taberer, R. 2009. Construction and establishment of a containment level 3 plant growth facility at Rothamsted Research.

Effectors, effectors et encore des effectors: the XIV International Congress on Molecular-Plant Microbe Interactions, Quebec

G - Articles in popular magazines and other technical publications

Walton, J. D., Avis, T. J., Alfano, J. R., Gijzen, M., Spanu, P., Hammond-Kosack, K. E. and Sanchez, M. 2009. Effectors, effectors et encore des effectors: the XIV International Congress on Molecular-Plant Microbe Interactions, Quebec. Molecular Plant-Microbe Interactions - MPMI. 22 (12), pp. 1479-1483. https://doi.org/10.1094/MPMI-22-12-1479

Virgaviridae: a new family of rod-shaped plant viruses

A - Papers appearing in refereed journals

Adams, M. J., Antoniw, J. F. and Kreuze, J. 2009. Virgaviridae: a new family of rod-shaped plant viruses. Archives of Virology. 154, pp. 1967-1972. https://doi.org/10.1007/s00705-009-0506-6

DArT markers: diversity analyses, genomes comparison, mapping and integration with SSR markers in Triticum monococcum

A - Papers appearing in refereed journals

Jing, H-C., Bayon, C., Kanyuka, K., Berry, S., Wenzl, P., Huttner, E., Kilian, A. and Hammond-Kosack, K. E. 2009. DArT markers: diversity analyses, genomes comparison, mapping and integration with SSR markers in Triticum monococcum. BMC Genomics. 10, p. 458 (17pp). https://doi.org/10.1186/1471-2164-10-458

Studies on the epidemiology and yield losses from rice black-streaked dwarf disease in a recent epidemic in Zheijiang province, China

A - Papers appearing in refereed journals

Wang, H-D., Chen, J-P., Wang, A-G., Jiang, X-H. and Adams, M. J. 2009. Studies on the epidemiology and yield losses from rice black-streaked dwarf disease in a recent epidemic in Zheijiang province, China. Plant Pathology. 58, pp. 815-825. https://doi.org/10.1111/j.1365-3059.2009.02091.x

High-resolution melting analysis of cDNA-derived PCR amplicons for rapid and cost-effective identification of novel alleles in barley

A - Papers appearing in refereed journals

Hofinger, B. J., Jing, H-C., Hammond-Kosack, K. E. and Kanyuka, K. 2009. High-resolution melting analysis of cDNA-derived PCR amplicons for rapid and cost-effective identification of novel alleles in barley. Theoretical and Applied Genetics. 119, pp. 851-865. https://doi.org/10.1007/s00122-009-1094-2

High resolution melting curve analysis for mutation detection in plants: a case study in barley

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C. G., Baldwin, T., Jing, H-C., Hammond-Kosack, K. E. and Kanyuka, K. 2009. High resolution melting curve analysis for mutation detection in plants: a case study in barley. Abstracts Monogram Network Workshop, Bristol, 29 April-1 May 2009 . pp. 28

Molecular characterization of a new macluravirus from yam in Yunnan, China

A - Papers appearing in refereed journals

Wang, J-G., Zou, X-J., Zheng, H-Y., Adams, M. J., Chen, H-R. and Chen, J-P. 2009. Molecular characterization of a new macluravirus from yam in Yunnan, China. Archives of Virology. 154, pp. 1379-1380. https://doi.org/10.1007/s00705-009-0427-4

Molecular characterization and functional analysis of MgNLP the sole NPP1 domain-containing protein, from the fungal wheat leaf pathogen Mycosphaerella graminicola

A - Papers appearing in refereed journals

Motteram, J., Kufner, I., Deller, S., Brunner, F., Hammond-Kosack, K. E., Nurnberger, T. and Rudd, J. J. 2009. Molecular characterization and functional analysis of MgNLP the sole NPP1 domain-containing protein, from the fungal wheat leaf pathogen Mycosphaerella graminicola. Molecular Plant-Microbe Interactions - MPMI. 22 (7), pp. 790-799. https://doi.org/10.1094/MPMI-22-7-0790

Protein-protein interactions in two potyviruses using the yeast two-hybrid system

A - Papers appearing in refereed journals

Lin, L., Shi, Y., Luo, Z., Lu, Y., Zheng, H., Yan, F., Chen, J., Adams, M. J. and Wu, Y. 2009. Protein-protein interactions in two potyviruses using the yeast two-hybrid system. Virus Research. 142, pp. 36-40. https://doi.org/10.1016/j.virusres.2009.01.006

Molecular cloning and characterization of the Dicer-like 2 gene from Brassica rapa

A - Papers appearing in refereed journals

Yan, F., Peng, J., Lu, Y., Lin, L., Zheng, H., Chen, Hairu, Chen, J. and Adams, M. J. 2009. Molecular cloning and characterization of the Dicer-like 2 gene from Brassica rapa. Molecular Biology Reports. 36, pp. 1283-1289. https://doi.org/10.1007/s11033-008-9310-8

Mapping and diagnostic marker development for Soil-borne cereal mosaic virus resistance in bread wheat

A - Papers appearing in refereed journals

Perovic, D., Forster, J., Devaux, P., Hariri, D., Guilleroux, M., Kanyuka, K., Lyons, R., Weyen, J., Feuerhelm, D., Kastirr, U., Sourdille, P., Roder, M. and Ordon, F. 2009. Mapping and diagnostic marker development for Soil-borne cereal mosaic virus resistance in bread wheat. Molecular Breeding. 23, pp. 641-653. https://doi.org/10.1007/s11032-009-9262-2

Characterization of two unusual features of resistance to Soilborne cereal mosaic virus in hexaploid wheat: leakiness and gradual elimination of viral coat protein from infected root tissues

A - Papers appearing in refereed journals

Lyons, R., Kutluk Yilmaz, N. D., Powers, S. J., Hammond-Kosack, K. E. and Kanyuka, K. 2009. Characterization of two unusual features of resistance to Soilborne cereal mosaic virus in hexaploid wheat: leakiness and gradual elimination of viral coat protein from infected root tissues. Molecular Plant-Microbe Interactions - MPMI. 22 (5), pp. 560-574. https://doi.org/10.1094/MPMI-22-5-0560

Lack of the plant signalling component SGT1b enhances disease resistance to Fusarium culmorum in Arabidopsis buds and flowers

A - Papers appearing in refereed journals

Cuzick, A., Maguire, K. and Hammond-Kosack, K. E. 2009. Lack of the plant signalling component SGT1b enhances disease resistance to Fusarium culmorum in Arabidopsis buds and flowers. New Phytologist. 181, pp. 901-912. https://doi.org/10.1111/j.1469-8137.2008.02712.x

Identification of novel splice variants of the Arabidopsis DCL2 gene

A - Papers appearing in refereed journals

Yan, F., Peng, J., Lu, Y., Lin, L., Zheng, H., Chen, Hairu, Chen, J. and Adams, M. J. 2009. Identification of novel splice variants of the Arabidopsis DCL2 gene. Plant Cell Reports. 28, pp. 241-246. https://doi.org/10.1007/s00299-008-0639-1

Mapping and diagnostic marker development for Soil-borne cereal mosaic virus resistance in wheat

C2 - Non-edited contributions to conferences

Perovic, D., Forster, J., Devaux, P., Hariri, D., Guilleroux, M., Kanyuka, K., Lyons, R., Weyen, J., Feuerhelm, D., Kastirr, U., Sourdille, P., Roder, M. and Ordon, F. 2008. Mapping and diagnostic marker development for Soil-borne cereal mosaic virus resistance in wheat. Abstracts 7th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Quedlingburg, 1-4 September 2008 . pp. 24

Functional analysis of reactive oxygen species-related genes in the wheat pathogen Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2008. Functional analysis of reactive oxygen species-related genes in the wheat pathogen Mycosphaerella graminicola. Abstracts Gordon Research Conference on Cellular and Molecular Fungal Biology, Holderness, New Hampshire, 29 June - 4 July 2008 .

Genomic analysis of transcriptional regulators of Fusarium graminearum

C2 - Non-edited contributions to conferences

Coulson, R., Urban, M., Antoniw, J. F. and Hammond-Kosack, K. E. 2008. Genomic analysis of transcriptional regulators of Fusarium graminearum.

Metabolomic and phenotypic analyses of Fusarium graminearum wild-type and mutant strains

C2 - Non-edited contributions to conferences

Urban, M., Lowe, R., Allwood, W., Ward, J. L., Beale, M. H. and Hammond-Kosack, K. E. 2008. Metabolomic and phenotypic analyses of Fusarium graminearum wild-type and mutant strains.

The infection biology and transcriptome of wheat pathogen Fusarium graminearum

C2 - Non-edited contributions to conferences

Brown, N. A., Urban, M., Van De Meene, A. and Hammond-Kosack, K. E. 2008. The infection biology and transcriptome of wheat pathogen Fusarium graminearum. Abstracts Syngenta Student Showcase, Jealott's Hill, 16 September 2008 .

Pathogenicity determinants of Fusarium graminearum on wheat ears

C2 - Non-edited contributions to conferences

Beacham, A. M., Urban, M., Antoniw, J. F. and Hammond-Kosack, K. E. 2008. Pathogenicity determinants of Fusarium graminearum on wheat ears. Abstracts BSPP Presidentail Meeting on Cereal Pathosystems, London, 16-17 December 2008 . pp. 11

Analysis of the newly sequenced Fusarium genomes using PHI-Base and ONDEX

C2 - Non-edited contributions to conferences

Beacham, A. M., Cavenet, C., Taubert, J., Urban, M., Antoniw, J. F., Rawlings, C. J. and Hammond-Kosack, K. E. 2008. Analysis of the newly sequenced Fusarium genomes using PHI-Base and ONDEX.

Pathogenicity determinants of Fusarium graminearum on wheat ears

C2 - Non-edited contributions to conferences

Beacham, A. M., Urban, M., Antoniw, J. F. and Hammond-Kosack, K. E. 2008. Pathogenicity determinants of Fusarium graminearum on wheat ears. Abstracts Syngenta Student Showcase, Jealott's Hill, 22 September 2008 .

Pathogenicity determinants of Fusarium graminearum on wheat ears

C2 - Non-edited contributions to conferences

Beacham, A. M., Antoniw, J. F., Urban, M. and Hammond-Kosack, K. E. 2008. Pathogenicity determinants of Fusarium graminearum on wheat ears. Asbtracts 9th European Conference on Fungal Genetics (ECFG9), Edinburgh, 5-8 April 2008 . pp. PR1.24

Fusarium graminearum kinome analysis and progress report. Confidential report to industrial sponsor

D1 - Technical reports: non-confidential

Antoniw, J. F., Urban, M. and Hammond-Kosack, K. E. 2008. Fusarium graminearum kinome analysis and progress report. Confidential report to industrial sponsor.

How can molecular genetic informtion on plant pathogens benefit disease management?

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E. 2008. How can molecular genetic informtion on plant pathogens benefit disease management? Abstracts BSPP Presidential Meeting on Cereal Pathosystems, London, 16-17 December 2008 . pp. 5

Plant resistance signalling hijacked by a necrotrophic fungal pathogen

A - Papers appearing in refereed journals

Hammond-Kosack, K. E. and Rudd, J. J. 2008. Plant resistance signalling hijacked by a necrotrophic fungal pathogen. Plant Signaling and Behavior. 3, pp. 993-995.

Reactive oxygen species-related genes in the wheat pathogen Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2008. Reactive oxygen species-related genes in the wheat pathogen Mycosphaerella graminicola. Abstracts BSPP Preseidential Meeting on Cereal Pathosystems, London, 16-17 December 2008 . pp. 9

The infection biology and transcriptome of wheat pathogen Fusarium graminearum

C2 - Non-edited contributions to conferences

Brown, N. A., Urban, M., Van De Meene, A. and Hammond-Kosack, K. E. 2008. The infection biology and transcriptome of wheat pathogen Fusarium graminearum. Abstracts BSPP Presidential Meeting on Cereal Pathosystems, London, 16-17 December 2008 . pp. 13

Importance of diagnostic markers for the management of soil-borne viral diseases of barley and wheat

C1 - Edited contributions to conferences/learned societies

Perovic, D., Tyrka, M., Forster, J., Devaux, P., Hariri, D., Guilleroux, M., Kanyuka, K., Lyons, R. L., Weyen, J., Feuerhelm, D., Kastirr, U., Sourdille, P., Roder, M. and Ordon, F. 2008. Importance of diagnostic markers for the management of soil-borne viral diseases of barley and wheat. Kobiljski, B. (ed.) Proceedings International Conference on Conventional and Molecular Breeding of Field and Vegetable Crops, Novi Sad, Serbia, 24-27 November 2008 . Institute of Field and Vegetable Crops, Novi Sad. pp. 233-237

A black-streaked dwarf disease on rice in China is caused by a novel fijivirus

A - Papers appearing in refereed journals

Zhang, H-M., Yang, J., Chen, J-P. and Adams, M. J. 2008. A black-streaked dwarf disease on rice in China is caused by a novel fijivirus. Archives of Virology. 153, pp. 1893-1898. https://doi.org/10.1007/s00705-008-0209-4

Triticum monococcum, an ancient relative of wheat, is a rich source of resistance to septoria tritici blotch disease

G - Articles in popular magazines and other technical publications

Jing, H-C., Gutteridge, R. J. and Hammond-Kosack, K. E. 2008. Triticum monococcum, an ancient relative of wheat, is a rich source of resistance to septoria tritici blotch disease. RRA Newsletter. 27, pp. 3-4.

Phenotypic and genetic analysis of the Triticum monococcum-Mycosphaerella graminicola interaction

A - Papers appearing in refereed journals

Jing, H-C., Lovell, D. J., Gutteridge, R. J., Jenk, D., Kornyukhin, D., Mitrofanova, O., Kema, G. H. J. and Hammond-Kosack, K. E. 2008. Phenotypic and genetic analysis of the Triticum monococcum-Mycosphaerella graminicola interaction. New Phytologist. 179, pp. 1121-1132. https://doi.org/10.1111/j.1469-8137.2008.02526.x

Take-all and the Wheat Genetic Improvement Network (WGIN)

G - Articles in popular magazines and other technical publications

Gutteridge, R. J. and Hammond-Kosack, K. E. 2008. Take-all and the Wheat Genetic Improvement Network (WGIN). RRA Newsletter. 27, pp. 1-2.

Assessment of the A.E. Watkins wheat collection in 2008 for resistance to foliar, stem base and root diseases. Objectives 2 and 5

G - Articles in popular magazines and other technical publications

Gutteridge, R. J. and Hammond-Kosack, K. E. 2008. Assessment of the A.E. Watkins wheat collection in 2008 for resistance to foliar, stem base and root diseases. Objectives 2 and 5. WGIN Stakeholders' Newsletter. October, pp. 1-4.

Significance and occurrence of the temperate ribotypes of Polymyxa species

C2 - Non-edited contributions to conferences

Smith, M. J., Ward, E., Walsh, J. A. and Adams, M. J. 2008. Significance and occurrence of the temperate ribotypes of Polymyxa species.

Elements of host disease resistance signalling hijacked by Mycosphaerella graminicola during successful wheat leaf infection

C2 - Non-edited contributions to conferences

Rudd, J. J., Keon, J. P. R., Motteram, J., Pirie, E. J. and Hammond-Kosack, K. E. 2008. Elements of host disease resistance signalling hijacked by Mycosphaerella graminicola during successful wheat leaf infection. Abstracts 7th International Mycosphaerella and Stagonospora Symposium, Ascona, 18-22 August 2008 .

Investigating resistance mechanisms to furoviruses in wheat and barley

C2 - Non-edited contributions to conferences

Lyons, R., Yilmaz, N. D. K., Hammond-Kosack, K. E. and Kanyuka, K. 2008. Investigating resistance mechanisms to furoviruses in wheat and barley. Abstracts 14th International Congress of Virology, Istanbul, 10-15 August 2008 .

Characterisation of resistance to furoviruses in wheat and barley

C2 - Non-edited contributions to conferences

Lyons, R., Yilmaz, N. D. K., Zlatska, A., Hammond-Kosack, K. E. and Kanyuka, K. 2008. Characterisation of resistance to furoviruses in wheat and barley. Abstracts 7th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Quedlinburg, 31 August - 4 September 2008 .

Discovery of novel e1F4 alleles conferring broad spectrum resistance to bymoviruses by exploiting genetic diversity of natural barley germplasm

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C. G., Baldwin, T., Beaudoin, F., Hammond-Kosack, K. E. and Kanyuka, K. 2008. Discovery of novel e1F4 alleles conferring broad spectrum resistance to bymoviruses by exploiting genetic diversity of natural barley germplasm. Abstracts 7th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Quedlinburg, 31 August - 4 September 2008 . pp. 29

Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2008. Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola. Abstracts Molecular Biology of Plant Pathogens, Birnam, 17-19 September 2008 .

Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2008. Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola. Abstracts Syngenta Student Showcase, Jealott's Hill, 16 September 2008 .

Completion of the sequence of rice gall dwarf virus from Guangxi, China

A - Papers appearing in refereed journals

Zhang, H-M., Xin, X., Yang, J., Chen, J-P., Wang, J-M. and Adams, M. J. 2008. Completion of the sequence of rice gall dwarf virus from Guangxi, China. Archives of Virology. 153, pp. 1737-1741. https://doi.org/10.1007/s00705-008-0167-x

GCN2-dependent phosphorylation of eukaryotic translation initiation factor 2-alpha in Arabidopsis

A - Papers appearing in refereed journals

Zhang, Y., Wang, Y., Kanyuka, K., Parry, M. A. J., Powers, S. J. and Halford, N. G. 2008. GCN2-dependent phosphorylation of eukaryotic translation initiation factor 2-alpha in Arabidopsis. Journal of Experimental Botany. 59 (11), pp. 3131-3141. https://doi.org/10.1093/jxb/ern169

Recent Rice stripe virus epidemics in Zhejiang Province, China, and experiments on sowing-date, disease-yield loss relationships and seedling susceptibility

A - Papers appearing in refereed journals

Wang, H-D., Chen, J-P., Zhang, H-M., Sun, X-L., Zhu, J-L., Wang, A-G., Sheng, W-X. and Adams, M. J. 2008. Recent Rice stripe virus epidemics in Zhejiang Province, China, and experiments on sowing-date, disease-yield loss relationships and seedling susceptibility. Plant Disease. 92 (8), pp. 1190-1196. https://doi.org/10.1094/PDIS-92-8-1190

Identification and characterization of a novel efficient resistance response to the furoviruses SBWMV and SBCMV in barley

A - Papers appearing in refereed journals

Lyons, R., Hammond-Kosack, K. E. and Kanyuka, K. 2008. Identification and characterization of a novel efficient resistance response to the furoviruses SBWMV and SBCMV in barley. Molecular Plant-Microbe Interactions - MPMI. 21 (9), pp. 1193-1204. https://doi.org/10.1094/MPMI-21-9-1193

Exploring resistance in wheat to Fusarium ear blight disease

C2 - Non-edited contributions to conferences

Lee, S. and Hammond-Kosack, K. E. 2008. Exploring resistance in wheat to Fusarium ear blight disease.

Exploring resistance in wheat to fusarium ear blight disease

C2 - Non-edited contributions to conferences

Lee, S. and Hammond-Kosack, K. E. 2008. Exploring resistance in wheat to fusarium ear blight disease. Abstracts 10th International Fusarium Workshop, Alghero, 30 August-2 September 2008 .

Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2008. Functional analysis of reactive oxygen species - related genes in the wheat pathogen Mycosphaerella graminicola. Abstracts 7th International Mycosphaerella and Stagonospora Symposium, Ascona, 18-22 August 2008 .

NPR1 and EDS11 contribute to host resistance against Fusarium culmorum in Arabidopsis buds and flowers

A - Papers appearing in refereed journals

Cuzick, A., Lee, S., Gezan, S. and Hammond-Kosack, K. E. 2008. NPR1 and EDS11 contribute to host resistance against Fusarium culmorum in Arabidopsis buds and flowers. Molecular Plant Pathology. 9 (5), pp. 697-704. https://doi.org/10.1111/J.1364-3703.2008.00488.X

Flexiviruses

B - Book chapters etc edited externally

Adams, M. J. 2008. Flexiviruses. in: Mahy, B. W. J. and Vanregenmortel, M. H. V. (ed.) Encyclopedia of Virology, 3rd ed. Vol. 2 Elsevier Science Ltd Kidlington Oxford. pp. 253-259

Identification of novel resistance phenotypes to Soil-borne cereal mosaic virus (SBCMV) and Soil-borne wheat mosaic virus (SBWMV) in barley

C2 - Non-edited contributions to conferences

Lyons, R., Hammond-Kosack, K. E. and Kanyuka, K. 2008. Identification of novel resistance phenotypes to Soil-borne cereal mosaic virus (SBCMV) and Soil-borne wheat mosaic virus (SBWMV) in barley. Abstracts Plant Virus Workshop, 162nd Meeting of the Society for General Microbiology, Edinburgh, 1 April 2008 .

Exploring eIF4E-based recessive resistance in barley to the bymoviruses Barley yellow mosiac virus (BaYMV) and Barley mild mosaic virus (BaMMV)

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C. G., Baldwin, T. and Kanyuka, K. 2008. Exploring eIF4E-based recessive resistance in barley to the bymoviruses Barley yellow mosiac virus (BaYMV) and Barley mild mosaic virus (BaMMV). Abstracts Plant Virus Workshop, 162nd Meeting of the Society for General Microbiology, Edinburgh, 1 April 2008 .

The wheat mitogen-activated protein kinses TaMPK3 and TaMPK6 are differentially regulated at multiple levels during compatible disease interactions with Mycosphaerella graminicola

A - Papers appearing in refereed journals

Rudd, J. J., Keon, J. and Hammond-Kosack, K. E. 2008. The wheat mitogen-activated protein kinses TaMPK3 and TaMPK6 are differentially regulated at multiple levels during compatible disease interactions with Mycosphaerella graminicola. Plant Physiology. 147, pp. 802-815. https://doi.org/10.1104/pp.108.119511

Resistance genes (R genes) in plants

B - Book chapters etc edited externally

Hammond-Kosack, K. E. and Kanyuka, K. 2008. Resistance genes (R genes) in plants. in: Encyclopedia of life sciences John Wiley & Sons Chichester, West Sussex.

Virus-induced gene silencing (VIGS) as a tool for functional genomics in wheat

C2 - Non-edited contributions to conferences

Kanyuka, K. and Hammond-Kosack, K. E. 2008. Virus-induced gene silencing (VIGS) as a tool for functional genomics in wheat. Abstracts 5th UK Cereal Genetics and Genomics Workshop, Rothamsted, 16-18 April 2008 .

The infection biology of Fusarium graminearum single gene deletion strains

C2 - Non-edited contributions to conferences

Brown, N. A., Baldwin, T., Urban, M., Van De Meene, A. and Hammond-Kosack, K. E. 2008. The infection biology of Fusarium graminearum single gene deletion strains. Abstracts 9th European Conference on Fungal Genetics (ECFG9), Edinburgh, 5-8 April 2008 .

Serological relationships among the over-expressed coat proteins of allexiviruses

A - Papers appearing in refereed journals

Lu, Y-W., Chen, J., Zheng, H-Y., Adams, M. J. and Chen, J-P. 2008. Serological relationships among the over-expressed coat proteins of allexiviruses. Journal of Phytopathology. 156 (4), pp. 251-255. https://doi.org/10.1111/j.1439-0434.2007.01323.x

A new potyvirus from butterfly flower (Iris japonica Thunb.) in Zhejiang, China

A - Papers appearing in refereed journals

Chen, J., Shi, Y-H., Li, M-Y., Adams, M. J. and Chen, J-P. 2008. A new potyvirus from butterfly flower (Iris japonica Thunb.) in Zhejiang, China. Archives of Virology. 153, pp. 567-569. https://doi.org/10.1007/s00705-007-0014-5

PHI-base update: additions to the pathogen-host interaction database

A - Papers appearing in refereed journals

Winnenburg, R., Urban, M., Beacham, A., Baldwin, T. K., Holland, S., Lindeberg, M., Hansen, H., Rawlings, C. J., Hammond-Kosack, K. E. and Kohler, J. 2008. PHI-base update: additions to the pathogen-host interaction database. Nucleic Acids Research. 36, pp. D572-D576. https://doi.org/10.1093/nar/gkm858

Fusarium graminearum gene deletion mutants map1 and tri5 reveal similarities and differences in the pathogenicity requirements to cause disease on Arabidopsis and wheat floral tissue

A - Papers appearing in refereed journals

Cuzick, A., Urban, M. and Hammond-Kosack, K. E. 2008. Fusarium graminearum gene deletion mutants map1 and tri5 reveal similarities and differences in the pathogenicity requirements to cause disease on Arabidopsis and wheat floral tissue. New Phytologist. 177 (4), pp. 990-1000. https://doi.org/10.1111/j.1469-8137.2007.02333.x

Molecular genetic and genomic analysis of wheat-pathogen interactions

C2 - Non-edited contributions to conferences

Jing, H-C., Rudd, J. J., Kanyuka, K. and Hammond-Kosack, K. E. 2007. Molecular genetic and genomic analysis of wheat-pathogen interactions. Abstracts ENDURE Workshop RA4.2 Exploitation of Plant Genetic Resistance, Angers, 5-6 July 2007 . pp. 13

Exploiting Triticum monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships (RRes) (Objective 6)

G - Articles in popular magazines and other technical publications

Jing, H-C., Gutteridge, R. and Hammond-Kosack, K. E. 2007. Exploiting Triticum monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships (RRes) (Objective 6). WGIN Stakeholders' Newsletter. October, pp. 3-6.

Exploiting Triticum monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships (RRes) Objective 6

G - Articles in popular magazines and other technical publications

Jing, H-C. and Hammond-Kosack, K. E. 2007. Exploiting Triticum monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships (RRes) Objective 6. Special WGIN Resources Newsletter. March 2007, pp. 2-6.

Wheat pathogens affecting yield and quality

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E. 2007. Wheat pathogens affecting yield and quality. Abstracts China-UK Wheat Workshop, Beijing, 10-11 December 2007 . pp. 20-21

Can information on the mode of pathogen attack be used to formulate novel crop protection strategies?

C1 - Edited contributions to conferences/learned societies

Rudd, J. J., Jing, H-C. and Hammond-Kosack, K. E. 2007. Can information on the mode of pathogen attack be used to formulate novel crop protection strategies? Proceedings 16th International Plant Protection Congress, Glasgow, 15-18 October 2007 . pp. 706-707

Specific resistance of wheat to Mycosphaerella graminicola operates to avoid MAPK activation and programmed cell death (PCD) associated with compatible interactions

C2 - Non-edited contributions to conferences

Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Specific resistance of wheat to Mycosphaerella graminicola operates to avoid MAPK activation and programmed cell death (PCD) associated with compatible interactions. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 .

Triticum monococcum as a reference species for wheat genetics and genomics

C2 - Non-edited contributions to conferences

Jing, H-C., Bayon, C., Gutteridge, R., Kornyukhin, D., Kanyuka, K., Orford, S., Zlatska, A., Mitrofanova, O. P., Phillips, A. L. and Hammond-Kosack, K. E. 2007. Triticum monococcum as a reference species for wheat genetics and genomics. Abstracts 4th UK Small Grain Cereal Genetics and Genomics Workshop: From Genes to Traits, Cambridge, 14-16 March 2007 .

A re-emerging threat to wheat crops - Black Stem Rust

G - Articles in popular magazines and other technical publications

Hammond-Kosack, K. E. 2007. A re-emerging threat to wheat crops - Black Stem Rust. RRA Newsletter. Issue 24, p. 2.

New version of Descriptions of Plant Viruses

C2 - Non-edited contributions to conferences

Adams, M. J. and Antoniw, J. F. 2007. New version of Descriptions of Plant Viruses. Abstracts Advances in Virology, Greenwich, 11-12 September 2007 .

Current issues in plant virus taxonomy

C2 - Non-edited contributions to conferences

Adams, M. J. 2007. Current issues in plant virus taxonomy. Abstracts Advances in Virology, Greenwich, 11-12 September 2007 .

Phenotypic and metabolomic analyses of the Fusarium graminearum SNF1 mutant

C2 - Non-edited contributions to conferences

Urban, M., Antoniw, J. F., Allwood, W., Beacham, A., Ward, J. L., Beale, M. H. and Hammond-Kosack, K. E. 2007. Phenotypic and metabolomic analyses of the Fusarium graminearum SNF1 mutant. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 . pp. 212

Functional evaluation of plant defence signalling against Fusarium ear blight disease in Arabidopsis

C2 - Non-edited contributions to conferences

Cuzick, A., Urban, M., Maguire, K., Lee, S. and Hammond-Kosack, K. E. 2007. Functional evaluation of plant defence signalling against Fusarium ear blight disease in Arabidopsis. Abstracts BSPP Presidential Meeting 2007: Attack and Defence in Plant Disease, Bath, 12-14 September 2007 . pp. 52

Functional evaluation of plant defence signalling against Fusarium graminearum and F. culmorum in Arabidopsis floral and wheat floral and leaf tissue

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Cuzick, A., Lee, S., Daudi, A., Bass, C. G., Maguire, K. and Urban, M. 2007. Functional evaluation of plant defence signalling against Fusarium graminearum and F. culmorum in Arabidopsis floral and wheat floral and leaf tissue. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 . pp. 107-108

Genomic analysis of rice stripe virus Zhejiang isolate shows the presence of an OTU-like domain in the RNA1 protein and a novel sequence motif conserved within the intergenic regions of ambisense segments of tenuiviruses

A - Papers appearing in refereed journals

Zhang, H-M., Yang, J., Sun, H-R., Xin, X., Wang, H-D., Chen, J-P. and Adams, M. J. 2007. Genomic analysis of rice stripe virus Zhejiang isolate shows the presence of an OTU-like domain in the RNA1 protein and a novel sequence motif conserved within the intergenic regions of ambisense segments of tenuiviruses. Archives of Virology. 152, pp. 1917-1923. https://doi.org/10.1007/s00705-007-1013-2

Identification of variation in adaptively important traits and genome-wide analysis of trait-marker associations in Triticum monococcum

A - Papers appearing in refereed journals

Jing, H-C., Kornyukhin, D., Kanyuka, K., Orford, S., Zlatska, A., Mitrofanova, O. P., Koebner, R. and Hammond-Kosack, K. E. 2007. Identification of variation in adaptively important traits and genome-wide analysis of trait-marker associations in Triticum monococcum. Journal of Experimental Botany. 58, pp. 3749-3764. https://doi.org/10.1093/jxb/erm225

Molecular characterization of the largest and smallest genome segments, S1 and S12, of Rice gall dwarf virus

A - Papers appearing in refereed journals

Zhang, H-M., Yang, J., Xin, X., Chen, J-P. and Adams, M. J. 2007. Molecular characterization of the largest and smallest genome segments, S1 and S12, of Rice gall dwarf virus. Virus Genes. 35, pp. 815-823. https://doi.org/10.1007/s11262-007-0142-8

A potyvirus P1 protein interacts with the Rieske Fe/S protein of its host

A - Papers appearing in refereed journals

Shi, Y., Chen, J., Hong, X. and Adams, M. J. 2007. A potyvirus P1 protein interacts with the Rieske Fe/S protein of its host. Molecular Plant Pathology. 8 (6), pp. 785-790. https://doi.org/10.1111/J.1364-3703.2007.00426.X

DON mycotoxin biosynthesis by Fusarium species, a metabolomics perspective

C2 - Non-edited contributions to conferences

Lowe, R., Allwood, J. W., Urban, M., Beale, M. H., Ward, J. L. and Hammond-Kosack, K. E. 2007. DON mycotoxin biosynthesis by Fusarium species, a metabolomics perspective. Abstracts BSPP Presidential Meeting 2007: Attack and Defence in Plant Disease, Bath, 12-14 September 2007 . pp. 64

Molecular genetic analysis of resistance to Mycosphaerella graminicola in Triticum monococcum

C2 - Non-edited contributions to conferences

Jing, H-C., Rudd, J. J. and Hammond-Kosack, K. E. 2007. Molecular genetic analysis of resistance to Mycosphaerella graminicola in Triticum monococcum. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 .

Molecular phylogeny and evolution of RAR1, a conserved zinc-binding protein in eukaryotic organisms

C2 - Non-edited contributions to conferences

Jing, H-C. and Hammond-Kosack, K. E. 2007. Molecular phylogeny and evolution of RAR1, a conserved zinc-binding protein in eukaryotic organisms. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 . pp. 377-378

Differential host responses to Soil-borne Cereal Mosaic Virus (SBCMV) and Soil-borne Wheat Mosaic Virus (SBWMV) in barley

C2 - Non-edited contributions to conferences

Lyons, R., Hammond-Kosack, K. E. and Kanyuka, K. 2007. Differential host responses to Soil-borne Cereal Mosaic Virus (SBCMV) and Soil-borne Wheat Mosaic Virus (SBWMV) in barley. Abstracts Advances in Virology, Greenwich, 11-12 September 2007 .

Differential host responses to Soil-borne Cereal Mosaic Virus (SBCMV) and Soil-borne Wheat Mosaic Virus (SBWMV) in barley

C2 - Non-edited contributions to conferences

Lyons, R., Hammond-Kosack, K. E. and Kanyuka, K. 2007. Differential host responses to Soil-borne Cereal Mosaic Virus (SBCMV) and Soil-borne Wheat Mosaic Virus (SBWMV) in barley. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 .

Grain fungus genome published

G - Articles in popular magazines and other technical publications

Antoniw, J. F., Baldwin, T., Urban, M. and Hammond-Kosack, K. E. 2007. Grain fungus genome published. EPSO News. No. 3.

Towards fine mapping of resistance genes to Septoria tritici leaf blotch in hexaploid and diploid wheat

C2 - Non-edited contributions to conferences

Kanyuka, K., Jing, H., Rudd, J. J., Brown, J. and Hammond-Kosack, K. E. 2007. Towards fine mapping of resistance genes to Septoria tritici leaf blotch in hexaploid and diploid wheat. Abstracts 1st Workshop on TritiGenCOST Action FA0604: Triticae Genomics for the Advancement of Essential European Crops, Puerto de la Cruz, Tenerife, 1-3 October 2007 . pp. 54

Using natural barley resources to discover novel alleles of eIF4E which can provide resistance against bymoviruses

C2 - Non-edited contributions to conferences

Hofinger, B. J., Bass, C. G., Baldwin, T. and Kanyuka, K. 2007. Using natural barley resources to discover novel alleles of eIF4E which can provide resistance against bymoviruses. Abstracts Advances in Virology, Greenwich, 11-12 September 2007 .

Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat. Abstracts Molecular Biology of Plant Pathogens (MBPP) Meeting, Bath, 10-11 September 2007 .

Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat. Abstracts BSPP Presidential Meeting 2007: Attack and Defence in Plant Disease, Bath, 12-14 September 2007 . pp. 53

Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat. Abstracts Syngenta Student Showcase, Jealott's Hill, September 2007 .

Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears

C2 - Non-edited contributions to conferences

Beacham, A., Antoniw, J. F., Urban, M. and Hammond-Kosack, K. E. 2007. Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears. Abstracts BSPP Presidential Meeting 2007: Attack and Defence in Plant Disease, Bath, 12-14 September 2007 .

Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears

C2 - Non-edited contributions to conferences

Beacham, A., Antoniw, J. F., Urban, M. and Hammond-Kosack, K. E. 2007. Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears. Abstracts Molecular Biology of Plant Pathogens (MBPP) Meeting, Bath, 10-11 September 2007 .

Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears

C2 - Non-edited contributions to conferences

Beacham, A., Antoniw, J. F., Urban, M. and Hammond-Kosack, K. E. 2007. Pathogenicity of Fusarium graminearum and F. culmorum on wheat ears. Abstracts Syngenta Student Showcase, Jealott's Hill, September 2007 .

The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization

A - Papers appearing in refereed journals

Cuomo, C. A., Guldener, U., Xu, J-R., Trail, F., Turgeon, B. G., Di Pietro, A., Walton, J. D., Ma, L-J., Baker, S. E., Rep, M., Adam, G., Antoniw, J. F., Baldwin, T., Calvo, S., Chang, Y-L., Decaprio, D., Gale, L. R., Gnerre, S., Goswami, R. S., Hammond-Kosack, K. E., Harris, L. J., Hilburn, K., Kennell, J. C., Kroken, S., Magnuson, J. K., Mannhaupt, G., Mauceli, E., Mewes, H-W., Mitterbauer, R., Munsterkotter, M., Nelson, D., O'donnell, K., Ouellet, T., Qi, W., Quesneville, H., Roncero, M. I. G., Seong, K-Y., Tetko, I. V., Urban, M., Waalwijk, C., Ward, T. J., Yao, J., Birren, B. W. and Kistler, H. C. 2007. The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization. Science - AAAS. 317, pp. 1400-1402. https://doi.org/10.1126/science.1143708

Molecular characterization of the genome segments S4, S6 and S7 of rice gall dwarf virus

A - Papers appearing in refereed journals

Zhang, H-M., Yang, J., Xin, X., Chen, J. P. and Adams, M. J. 2007. Molecular characterization of the genome segments S4, S6 and S7 of rice gall dwarf virus. Archives of Virology. 152, pp. 1593-1602. https://doi.org/10.1007/s00705-007-1004-3

Identifying resistance to Fusarium Ear Blight in wheat

C2 - Non-edited contributions to conferences

Lee, S., Daudi, A. and Hammond-Kosack, K. E. 2007. Identifying resistance to Fusarium Ear Blight in wheat. Abstracts BSPP Presidential Meeting 2007: Attack and Defence in Plant Disease, Bath, 12-14 September 2007 .

Exploring resistance to Fusarium ear blight

C2 - Non-edited contributions to conferences

Lee, S. and Hammond-Kosack, K. E. 2007. Exploring resistance to Fusarium ear blight. Abstracts Molecular Biology of Plant Pathogens (MBPP) Meeting, Bath, 10-11 September 2007 .

Barley eIF4E recessive resistance genes to soil-borne mosaic viruses

C2 - Non-edited contributions to conferences

Kanyuka, K. 2007. Barley eIF4E recessive resistance genes to soil-borne mosaic viruses. Abstracts 4th UK Small Grain Cereals Genetic and Genomics Workshop: From Genes to Traits, Cambridge, 14-16 March 2007 .

Identification of variant natural and chemically induced alleles of EIF4E in barley for control of bymoviruses

C2 - Non-edited contributions to conferences

Bass, C. G., Baldwin, T., Tymon, A. and Kanyuka, K. 2007. Identification of variant natural and chemically induced alleles of EIF4E in barley for control of bymoviruses. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 . pp. 287

Family Flexiviridae : a case study in virion and genome plasticity

A - Papers appearing in refereed journals

Martelli, G. P., Adams, M. J., Kreuze, J. F. and Dolja, V. V. 2007. Family Flexiviridae : a case study in virion and genome plasticity. Annual Review of Phytopathology. 45, pp. 73-100. https://doi.org/10.1146/annurev.phyto.45.062806.094401

Screening for genetic elements involved in the nonhost response of sugar beet to the plasmodiophorid cereal root parasite Polymyxa graminis by representational difference analysis

A - Papers appearing in refereed journals

Mcgrann, G. R. D., Martin, L. D., Kingsnorth, C. S., Asher, M. J. C., Adams, M. J. and Mutasa-Göttgens, E. S. 2007. Screening for genetic elements involved in the nonhost response of sugar beet to the plasmodiophorid cereal root parasite Polymyxa graminis by representational difference analysis. Journal of General Plant Pathology. 73, pp. 260-265. https://doi.org/10.1007/s10327-007-0024-x

PHI-base: a database of experimentally verified pathogenicity, virulence and effector genes in fungal, oomycete and bacterial pathogens of animals and plants

C2 - Non-edited contributions to conferences

Baldwin, T. K., Winnenburg, R., Beacham, A., Urban, M., Rawlings, C. J., Koehler, J. and Hammond-Kosack, K. E. 2007. PHI-base: a database of experimentally verified pathogenicity, virulence and effector genes in fungal, oomycete and bacterial pathogens of animals and plants. Abstracts 13th International Congress on Molecular Plant-Microbe Interactions, Sorrento, 21-27 July 2007 .

Distribution of microsatellite alleles linked with Sbm 1 locus and controlled resistance to soil-borne cereal mosaic virus (SBCMV) among accessions of Ukrainian common wheat varieties cultivated in 1900-2006 and their relation to world wheat germplasm

C2 - Non-edited contributions to conferences

Zlatska, A., Kanyuka, K. and Hammond-Kosack, K. E. 2007. Distribution of microsatellite alleles linked with Sbm 1 locus and controlled resistance to soil-borne cereal mosaic virus (SBCMV) among accessions of Ukrainian common wheat varieties cultivated in 1900-2006 and their relation to world wheat germplasm. Abstracts 15th International Conference on Plant and Animal Genomes, San Diego, 13-17 January 2007 .

Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Investigating the roles of reactive oxygen species during Mycosphaerella graminicola infection of wheat. Abstracts 24th Fungal Genetics Conference, Asilomar, 20-25 March 2007 . pp. 152

Comparison of ITS sequences from UK and North American sugar-beet powdery mildews and the designation of Erysiphe betae

A - Papers appearing in refereed journals

Francis, S. A., Roden, B. C., Adams, M. J., Weiland, J. and Asher, M. J. C. 2007. Comparison of ITS sequences from UK and North American sugar-beet powdery mildews and the designation of Erysiphe betae. Mycological Research. 111 (2), pp. 204-212. https://doi.org/10.1016/j.mycres.2006.10.010

Characterisation of an isolate of Narcissus degeneration virus from Chinese narcissus (Narcissus tazetta var. chinensis )

A - Papers appearing in refereed journals

Chen, J., Shi, Y-H., Adams, M. J., Zheng, H-Y., Qin, B-X. and Chen, J-P. 2007. Characterisation of an isolate of Narcissus degeneration virus from Chinese narcissus (Narcissus tazetta var. chinensis ). Archives of Virology. 152, pp. 441-448. https://doi.org/10.1007/s00705-006-0841-9

Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host

A - Papers appearing in refereed journals

Keon, J. P. R., Antoniw, J. F., Carzaniga, R., Deller, S., Ward, J. L., Baker, J. M., Beale, M. H., Hammond-Kosack, K. E. and Rudd, J. J. 2007. Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host. Molecular Plant-Microbe Interactions - MPMI. 20 (2), pp. 178-193. https://doi.org/10.1094/MPMI-20-2-0178

Molecular tools for the study of Fusarium ear blight caused by Fusarium graminearum and Fusarium culmorum

C2 - Non-edited contributions to conferences

Bass, C. G., Urban, M. and Hammond-Kosack, K. E. 2006. Molecular tools for the study of Fusarium ear blight caused by Fusarium graminearum and Fusarium culmorum. Abstracts 8th European Conference of Fungal Genetics, Vienna, 8-11 April 2006 . pp. 364

Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host

C2 - Non-edited contributions to conferences

Keon, J. P. R., Antoniw, J. F., Carzaniga, R., Deller, S., Ward, J. L., Baker, J. M., Beale, M. H., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Transcriptional adaptation of Mycosphaerella graminicola to programmed cell death (PCD) of its susceptible wheat host. Abstracts 3rd COGEME Interest Group Meeting, Manchester, 7-8 November 2006 .

The transcriptional changes of a hemibiotrophic fungal pathogen during successful adaptation to hypersensitive response-like programmed cell death of its plant host

C2 - Non-edited contributions to conferences

Keon, J. P. R., Antoniw, J. F., Carzaniga, R., Hammond-Kosack, K. E. and Rudd, J. J. 2006. The transcriptional changes of a hemibiotrophic fungal pathogen during successful adaptation to hypersensitive response-like programmed cell death of its plant host. Abstracts 8th European Conference on Fungal Genetics, Vienna, 8-11 April 2006 . pp. 351

Exploiting T. monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships

G - Articles in popular magazines and other technical publications

Jing, H-C and Hammond-Kosack, K. E. 2006. Exploiting T. monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships. WGIN Stakeholders' Newsletter. April, pp. 2-3.

Exploiting T. monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships

G - Articles in popular magazines and other technical publications

Phillips, A. L., Jing, H-C. and Hammond-Kosack, K. E. 2006. Exploiting T. monococcum as a model for detection of traits, genes and variant alleles and for identifying phenotype:genotype relationships. WGIN Stakeholders' Newsletter. October, pp. 2-4.

Building trans-Atlantic links in fight against plant pathogen

G - Articles in popular magazines and other technical publications

Hammond-Kosack, K. E. 2006. Building trans-Atlantic links in fight against plant pathogen. BBSRC Business. October 2006, p. 4.

The host: Resistance gene isolation and realising the potential

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E. 2006. The host: Resistance gene isolation and realising the potential. Abstracts British Society for Plant Pathology 25th Anniversary Celebratory Meeting, London, 19 December 2006 .

BIOEXPLOIT Project

G - Articles in popular magazines and other technical publications

Hammond-Kosack, K. E., Tomas, J. and Smant, G. 2006. BIOEXPLOIT Project. EUCARPIA Bulletin. 33, pp. 32-35.

To build pyramids of major R genes and QTLs by marker-assisted introgression into elite material. BIOEXPLOIT Progress Report D5.2.1 on Workpackage WP5.2

D1 - Technical reports: non-confidential

Hammond-Kosack, K. E. 2006. To build pyramids of major R genes and QTLs by marker-assisted introgression into elite material. BIOEXPLOIT Progress Report D5.2.1 on Workpackage WP5.2.

Phenotypic analysis and functional characterisation of allele variance in customised core collections. BIOEXPLOIT Progress Report D4.2.1.2 on Workpackage WP4.2

D1 - Technical reports: non-confidential

Hammond-Kosack, K. E. 2006. Phenotypic analysis and functional characterisation of allele variance in customised core collections. BIOEXPLOIT Progress Report D4.2.1.2 on Workpackage WP4.2.

Dominant-negative interference with defence signalling by truncation mutations of the tomato Cf-9 disease resistance gene

A - Papers appearing in refereed journals

Barker, C. L., Baillie, B. K., Hammond-Kosack, K. E., Jones, J. D. G. and Jones, D. A. 2006. Dominant-negative interference with defence signalling by truncation mutations of the tomato Cf-9 disease resistance gene. The Plant Journal. 46, pp. 385-399. https://doi.org/10.1111/j.1365-313X.2006.02699.x

Molecular genetics to identify genes involved in the pathogenicity of Fusarium graminearum on wheat ears

C2 - Non-edited contributions to conferences

Baldwin, T. K., Urban, M. and Hammond-Kosack, K. E. 2006. Molecular genetics to identify genes involved in the pathogenicity of Fusarium graminearum on wheat ears. In %Abstracts Syngenta Postgraduate Symposium, Bracknell, 14 September 2006 .

Identification of genes differentially expressed in sugar beet roots in response to challenge by Polymyxa graminis

C1 - Edited contributions to conferences/learned societies

Mcgrann, G. R. D., Martin, L. D., Asher, M. J. C., Adams, M. J. and Mutasa-Göttgens, E. S. 2006. Identification of genes differentially expressed in sugar beet roots in response to challenge by Polymyxa graminis. Proceedings 6th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Bologna, 5-7 September 2005 . pp. 89-92

Forward genetics for gene discovery in wheat

C2 - Non-edited contributions to conferences

Hammond-Kosack, K. E., Jing, H-C., Tearall, K., Phillips, A. L. and Kanyuka, K. 2006. Forward genetics for gene discovery in wheat. Abstracts Joint Wellcome/ESF Conference on Crop Genomics, Trait Analysis and Breeding, Hinxton, 8-11 November 2006 . pp. 22

Molecular genetics to identify genes involved in the pathogenicity of Fusarium graminearum on wheat ears

C2 - Non-edited contributions to conferences

Baldwin, T. K., Urban, M., Antoniw, J. F. and Hammond-Kosack, K. E. 2006. Molecular genetics to identify genes involved in the pathogenicity of Fusarium graminearum on wheat ears. Abstracts 9th International Fungal Biology Conference and 16th New Phytologist Symposium on Impact of Genomics on Fungal Biology, Nancy, 18-20 September 2006 . pp. 17-18

Triticum monococcum, the ancient grain which turned stone age nomads into farmers

C2 - Non-edited contributions to conferences

Jing, H-C., Lovell, D. J., Kornyukhin, D., Kanyuka, K., Orford, S., Field, M. A., Mitrofanova, O. P., Koebner, R. and Hammond-Kosack, K. E. 2006. Triticum monococcum, the ancient grain which turned stone age nomads into farmers. Abstracts 5th Plant Genomics European Meeting (Plant GEMs), Venice, 11-14 October 2006 . pp. P8.13

The Pathogen-Host Interactions database (PHI-base) provides insights into generic and novel themes of pathogenicity

A - Papers appearing in refereed journals

Baldwin, T. K., Winnenburg, R., Urban, M., Rawlings, C. J., Koehler, J. and Hammond-Kosack, K. E. 2006. The Pathogen-Host Interactions database (PHI-base) provides insights into generic and novel themes of pathogenicity. Molecular Plant-Microbe Interactions - MPMI. 19 (12), pp. 1451-1462. https://doi.org/10.1094/MPMI-19-1451

Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat. Abstracts COGEME Interest Group Meeting, Manchester, 7-8 November 2006 .

Narcissus symptomless virus: a new carlavirus of daffodils

A - Papers appearing in refereed journals

Chen, J., Shi, Y-H., Lu, Y-W., Adams, M. J. and Chen, J-P. 2006. Narcissus symptomless virus: a new carlavirus of daffodils. Archives of Virology. 151, pp. 2261-2267. https://doi.org/10.1007/s00705-006-0801-4

Functional evaluation of plant defence signalling against Fusarium ear blight disease in Arabidopsis

C2 - Non-edited contributions to conferences

Cuzick, A., Maguire, K., Lee, S. and Hammond-Kosack, K. E. 2006. Functional evaluation of plant defence signalling against Fusarium ear blight disease in Arabidopsis. Abstracts 17th International Conference on Arabidopsis Research, Madison, 28 June-2 July 2006 .

The Sbm 1 locus conferring resistance to Soil-borne cereal mosaic virus maps to a gene-rich region on 5DL in wheat

A - Papers appearing in refereed journals

Bass, C. G., Hendley, R., Adams, M. J., Hammond-Kosack, K. E. and Kanyuka, K. 2006. The Sbm 1 locus conferring resistance to Soil-borne cereal mosaic virus maps to a gene-rich region on 5DL in wheat. Genome. 49, pp. 1140-1148. https://doi.org/10.1139/G06-064

Improving the diversity of resistance in wheat to Fusarium ear blight disease

C2 - Non-edited contributions to conferences

Lee, S., Daudi, A. and Hammond-Kosack, K. E. 2006. Improving the diversity of resistance in wheat to Fusarium ear blight disease. Abstracts 9th European Fusarium Seminar, Wageningen, 19-22 September 2006 . pp. 100

Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat. Abstracts Molecular Biology of Plant Pathogens Meeting, Birnam, 18-20 September 2006 .

Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat. Abstracts Annual Scientific Meeting of the British Mycological Society, Birmingham, 4-7 September 2006 . pp. 68

Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat. Abstracts Syngenta Biology and Bioscience CASE PhD Open Day, Bracknell, 14 September 2006 .

A taxonomic review of the fungally-transmitted viruses

C1 - Edited contributions to conferences/learned societies

Adams, M. J. 2006. A taxonomic review of the fungally-transmitted viruses. Rush, C. M. (ed.) Proceedings 6th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Bologna, 5-7 September 2005 . pp. 1-4

Complete nucleotide sequence and affinities of the genomic RNA of Narcissus common latent virus (genus Carlavirus )

A - Papers appearing in refereed journals

Zheng, H-Y., Chen, J., Adams, M. J. and Chen, J-P. 2006. Complete nucleotide sequence and affinities of the genomic RNA of Narcissus common latent virus (genus Carlavirus ). Archives of Virology. 151, pp. 1667-1672. https://doi.org/10.1007/s00705-006-0727-x

Complete nucleotide sequence of the genomic RNA of Narcissus yellow stripe virus from Chinese narcissus in Zhangzhou city, China. Annotated sequence record

A - Papers appearing in refereed journals

Chen, J., Lu, Y-W., Shi, Y-H., Adams, M. J. and Chen, J-P. 2006. Complete nucleotide sequence of the genomic RNA of Narcissus yellow stripe virus from Chinese narcissus in Zhangzhou city, China. Annotated sequence record. Archives of Virology. 151, pp. 1673-1677. https://doi.org/10.1007/s00705-006-0788-x

Improving the diversity of race-non-specific resistance mechanisms available in wheat to combat fusarium ear blight disease

C2 - Non-edited contributions to conferences

Lee, S., Daudi, A. and Hammond-Kosack, K. E. 2006. Improving the diversity of race-non-specific resistance mechanisms available in wheat to combat fusarium ear blight disease. Abstracts Cranfield University Postgraduate Conference, Cranfield, 29 June 2006 .

Functionality of resistance gene Hero which controls plant root-infecting potato cyst nematodes, in leaves of tomato

A - Papers appearing in refereed journals

Caberera Poch, H. L., Manzanilla-Lopez, R. H. and Kanyuka, K. 2006. Functionality of resistance gene Hero which controls plant root-infecting potato cyst nematodes, in leaves of tomato. Plant, Cell and Environment. 29 (7), pp. 1372-1378. https://doi.org/10.1111/j.1365-3040.2006.01517.x

Significance and occurrence of the temperate ribotypes of Polymyxa graminis

C2 - Non-edited contributions to conferences

Smith, M., Ward, E., Walsh, J. and Adams, M. J. 2006. Significance and occurrence of the temperate ribotypes of Polymyxa graminis. Abstracts International Conference on Advances in Plant Virology, Coventry, 5-7 April 2006 .

Host resistance to Soil-borne cereal mosaic virus and Soil-borne wheat mosiac virus

C2 - Non-edited contributions to conferences

Lyons, R., Hammond-Kosack, K. E. and Kanyuka, K. 2006. Host resistance to Soil-borne cereal mosaic virus and Soil-borne wheat mosiac virus. Abstracts International Conference on Advances in Plant Virology, Warwick, 5-7 April 2006 .

Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat

C2 - Non-edited contributions to conferences

Deller, S., Keon, J. P. R., Antoniw, J. F., Hammond-Kosack, K. E. and Rudd, J. J. 2006. Investigating the role of reactive oxygen species (ROS) during Mycosphaerella graminicola infection of wheat. Abstracts 8th European Conference on Fungal Genetics, Vienna, 8-11 April 2006 . pp. 355

Detection and characterisation of a second potyvirus from Thunberg fritillary in China

A - Papers appearing in refereed journals

Chen, J., Zheng, H-Y., Shi, Y-H., Adams, M. J., Wei, C-B., Lin, L. and Chen, J-P. 2006. Detection and characterisation of a second potyvirus from Thunberg fritillary in China. Archives of Virology. 151, pp. 439-447. https://doi.org/10.1007/s00705-005-0678-7

PHI-base: a new database for pathogen host interactions

A - Papers appearing in refereed journals

Winnenburg, R., Baldwin, T. K., Urban, M., Rawlings, C. J., Koehler, J. and Hammond-Kosack, K. E. 2006. PHI-base: a new database for pathogen host interactions. Nucleic Acids Research. 34 (1), pp. D459-D464. https://doi.org/10.1093/nar/gkj047

DPVweb: a comprehensive database of plant and fungal virus genes and genomes

A - Papers appearing in refereed journals

Adams, M. J. and Antoniw, J. F. 2006. DPVweb: a comprehensive database of plant and fungal virus genes and genomes. Nucleic Acids Research. 34, pp. D382-D385. https://doi.org/10.1093/nar/gkj023

Bioinformatic and molecular genetic tools for identifying genes involved in the pathogenicity of Fusarium graminearum on wheat ears

C2 - Non-edited contributions to conferences

Baldwin, T. K., Winnenburg, R., Koehler, J., Urban, M. and Hammond-Kosack, K. E. 2005. Bioinformatic and molecular genetic tools for identifying genes involved in the pathogenicity of Fusarium graminearum on wheat ears. Abstracts Molecular Biology of Plant Pathogens Meeting, Ambleside, 19-21 September 2005 .

Bioinformatic and molecular genetic tools for identifying genes involved in the pathogenicity of Fusarium graminearum on wheat ears

C2 - Non-edited contributions to conferences

Baldwin, T. K., Winnenburg, R., Koehler, J., Urban, M. and Hammond-Kosack, K. E. 2005. Bioinformatic and molecular genetic tools for identifying genes involved in the pathogenicity of Fusarium graminearum on wheat ears. Abstracts ESF-EMBO Symposium on the Comparative Genomics of Eukaryotic Microorganisms, Sant Feliu de Guixols, 12-17 November 2005 .

The transcription-associated proteins of Fusarium graminearum identified by sequence clustering and profile analyses

C2 - Non-edited contributions to conferences

Coulson, R., Urban, M., Antoniw, J. F. and Hammond-Kosack, K. E. 2005. The transcription-associated proteins of Fusarium graminearum identified by sequence clustering and profile analyses. Abstracts 23rd Fungal Genetics Conference, Asilomar, 15-20 March 2005 . pp. 113

Microarray transcription profiling provides insights into metabolic regulation and stress adaptation during infection of wheat by the Septoria leaf blotch pathogen, Mycosphaerella graminicola

C2 - Non-edited contributions to conferences

Rudd, J. J., Keon, J. P. R., Antoniw, J. F., Skinner, W., Hargreaves, J. A. and Hammond-Kosack, K. E. 2005. Microarray transcription profiling provides insights into metabolic regulation and stress adaptation during infection of wheat by the Septoria leaf blotch pathogen, Mycosphaerella graminicola. Abstracts 23rd Fungal Genetics Conference, Asilomar, 15-20 March 2005 . pp. 137

The use of PCR methods for Polymyxa graminis to study intraspecific variation, phylogeny and inoculum levels

C2 - Non-edited contributions to conferences

Ward, E., Motteram, J., Kanyuka, K. and Adams, M. J. 2005. The use of PCR methods for Polymyxa graminis to study intraspecific variation, phylogeny and inoculum levels. Abstracts 6th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Bologna, 5-7 September 2005 .

Occurrence and significance of the temperate ribotypes of Polymyxa graminis

C1 - Edited contributions to conferences/learned societies

Smith, M. J., Ward, E. and Adams, M. J. 2005. Occurrence and significance of the temperate ribotypes of Polymyxa graminis. Proceedings 6th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Bologna, 5-7 September 2005 .

The umb 1 mutant of Arabidopsis provides evidence for a role of BIG protein in metabolism and nutrient signalling

C2 - Non-edited contributions to conferences

Ghneim, T., Kanyuka, K., Smirnoff, N. and Hooley, R. 2005. The umb 1 mutant of Arabidopsis provides evidence for a role of BIG protein in metabolism and nutrient signalling. Abstracts Plant Biology 2005: Annual Meeting of the American Society of Plant Biologists, Seattle, 16-20 July 2005 .

A taxonomic review of the fungally-transmitted viruses

C2 - Non-edited contributions to conferences

Adams, M. J. 2005. A taxonomic review of the fungally-transmitted viruses. Abstracts 6th Symposium International Working Group on Plant Viruses with Fungal Vectors (IWGPVFV), Bologna, 5-7 September 2005 .

Plant virus taxonomy: some current issues

A - Papers appearing in refereed journals

Adams, M. J. 2005. Plant virus taxonomy: some current issues. Parasitica. 61, pp. 23-28.

Physiological adaptation of a fungal plant pathogen to its host environment revealed through microarray transcription profiling

C2 - Non-edited contributions to conferences

Rudd, J. J., Keon, J. P. R., Antoniw, J. F., Skinner, W., Hargreaves, J. A. and Hammond-Kosack, K. E. 2005. Physiological adaptation of a fungal plant pathogen to its host environment revealed through microarray transcription profiling. Abstracts COGEME Interest Group Meeting, Manchester, 8-9 November 2005 .

New approaches for durable disease resistance in wheat

C1 - Edited contributions to conferences/learned societies

Jing, H-C., Lovell, D. J., Kanyuka, K., Tearall, K. L., Phillips, A. L., Hammond-Kosack, K. E., Kornyukhin, D., Mitrofanova, O. P., Orford, S. and Koebner, R. 2005. New approaches for durable disease resistance in wheat. Proceedings BCPC International Congress - Crop Science and Technology, Glasgow, 31 October-2 November 2005 . pp. 963-970

Use of the DPV sequence database for high-throughput analyses of plant virus sequences for taxonomic and other purposes

C2 - Non-edited contributions to conferences

Adams, M. J. and Antoniw, J. F. 2005. Use of the DPV sequence database for high-throughput analyses of plant virus sequences for taxonomic and other purposes. Abstracts 13th International Congress of Virology: Microbes in a Changing World, San Francisco, 23-28 July 2005 .

Metabolic and stress adaptation by Mycosphaerella graminicola during sporulation in its host revealed through microarray transcription profiling

A - Papers appearing in refereed journals

Keon, J. P. R., Rudd, J. J., Antoniw, J. F., Skinner, W., Hargreaves, J. A. and Hammond-Kosack, K. E. 2005. Metabolic and stress adaptation by Mycosphaerella graminicola during sporulation in its host revealed through microarray transcription profiling. Molecular Plant Pathology. 6 (5), pp. 527-540. https://doi.org/10.1111/J.1364-3703.2005.00304.X

Functional evaluation of plant defence signalling against fusarium ear blight disease in arabidopsis

C2 - Non-edited contributions to conferences

Cuzick, A., Lee, S., Urban, M. and Hammond-Kosack, K. E. 2005. Functional evaluation of plant defence signalling against fusarium ear blight disease in arabidopsis. Abstracts LAMP (London Area Molecular Plant Sciences) Meeting, Wye, 5 October 2005 .

DPVweb: an open access internet resource on plant viruses and virus diseases

G - Articles in popular magazines and other technical publications

Adams, M. J. and Antoniw, J. F. 2005. DPVweb: an open access internet resource on plant viruses and virus diseases. Outlooks on Pest Management. 16, pp. 268-270.

Agrobacterium tumefaciens-mediated transformation of Leptosphaeria app. and Oculimacula spp. with the reef coral gene DsRed and the jellyfish gene gfp

A - Papers appearing in refereed journals

Eckert, M., Maguire, K. L., Urban, M., Foster, S. J., Fitt, B. D. L., Lucas, J. A. and Hammond-Kosack, K. E. 2005. Agrobacterium tumefaciens-mediated transformation of Leptosphaeria app. and Oculimacula spp. with the reef coral gene DsRed and the jellyfish gene gfp. FEMS Microbiology Letters. 253, pp. 67-74. https://doi.org/10.1016/j.femsle.2005.09.041

Membrane proteins in plant viruses

B - Book chapters etc edited externally

Adams, M. J. and Antoniw, J. F. 2005. Membrane proteins in plant viruses. in: Fischer, W. B. (ed.) Viral membrane proteins: structure, function and drug design Kluwer Academic Publishers, New York. pp. 3-19

Family: flexiviridae

B - Book chapters etc edited externally

Adams, M. J., Accotto, G. P., Agranovsky, A. A., Bar-Joseph, M., Boscia, D., Brunt, A. A., Candresse, T., Coutts, R. H. A., Dolja, V. V., Falk, B. W., Foster, G. D., Gonsalves, D., Jelkmann, W., Karasev, A., Martelli, G. P., Mawassi, M., Milne, R. G., Minafra, A., Namba, S., Rowhani, A., Vetten, H. J., Vishnichenko, V. K., Wisler, G. C., Yoshikawa, N. and Zavriev, S. K. 2005. Family: flexiviridae. in: Mayo, M. A., Ball, L. A., Desselberger, U., Maniloff, J. and Fauquet, C. M. (ed.) Virus taxonomy: classification and nomenclature of viruses. 8th Report of the International Committee on the Taxonomy of Viruses Elsevier, Amsterdam. pp. 1087-1122

Family: potyviridae

B - Book chapters etc edited externally

Berger, P. H., Adams, M. J., Barnett, O. W., Brunt, A. A., Hammond, J., Hill, J. H., Jordan, R. L., Kashiwazaki, S., Rybicki, E. P., Spence, N., Stenger, D. C., Ohki, S. T., Uyeda, I., Van Zaayen, A., Valkonen, J. and Vetten, H. J. 2005. Family: potyviridae. in: Mayo, M. A., Ball, L. A., Desselberger, U., Maniloff, J. and Fauquet, C. M. (ed.) Virus taxonomy: classification and nomenclature of viruses. 8th Report of the International Committee on the Taxonomy of Viruses Elsevier, Amsterdam. pp. 819-841

Natural and induced barley e1F4E gene mutants provide resistance to bymoviruses: a conserved antiviral resistance mechanism in plants

C2 - Non-edited contributions to conferences

Kanyuka, K., Druka, A., Caldwell, D. G., Tymon, A., Mccallum, N., Waugh, R. and Adams, M. J. 2005. Natural and induced barley e1F4E gene mutants provide resistance to bymoviruses: a conserved antiviral resistance mechanism in plants. Abstracts 6th Symposium International Working Group on Plant Viruses with Fungal Vectors (IWGPVFV), Bologna, 5-7 September 2005 .

Disease resistance in Triticum monococcum to major UK wheat pathogens: investigations of the roles of RAR1/SGT1

C2 - Non-edited contributions to conferences

Jing, H-C., Kornyukhin, D., Lovell, D. J., Kanyuka, K., Mitrofanova, O. P., Maguire, K., West, J. S. and Hammond-Kosack, K. E. 2005. Disease resistance in Triticum monococcum to major UK wheat pathogens: investigations of the roles of RAR1/SGT1. Abstracts Small Grain Cereals Workshop, Dundee, 9-11 March 2005 .

Functional evaluation of plant defence signalling against fusarium ear blight disease in arabidopsis

C2 - Non-edited contributions to conferences

Cuzick, A., Lee, S., Urban, M. and Hammond-Kosack, K. E. 2005. Functional evaluation of plant defence signalling against fusarium ear blight disease in arabidopsis. Abstracts 4th Plant Genomics European Meetings (Plant-GEMs 4), Amsterdam, 20-23 September 2005 .

Plant virus taxonomy: some current issues

C2 - Non-edited contributions to conferences

Adams, M. J. 2005. Plant virus taxonomy: some current issues. Abstracts 10th Conference on Viral Diseases of Gramineae in Europe, Louvain-la-Neuve, 12-14 September 2005 .

Characterisation of the welsh onion isolate of Shallot yellow stripe virus from China

A - Papers appearing in refereed journals

Chen, J., Wei, C-B., Zheng, H-Y., Shi, Y-H., Adams, M. J., Lin, L., Zhang, Q-Y., Wang, S-J. and Chen, J-P. 2005. Characterisation of the welsh onion isolate of Shallot yellow stripe virus from China. Archives of Virology. 150, pp. 2091-2099.

Host plant resistance to Soil-borne wheat mosaic virus and Soil-borne cereal mosaic virus

C2 - Non-edited contributions to conferences

Lyons, R., Hammond-Kosack, K. E., Dickinson, M. and Kanyuka, K. 2005. Host plant resistance to Soil-borne wheat mosaic virus and Soil-borne cereal mosaic virus. Abstracts 10th Conference on Viral Diseases of Gramineae in Europe, Louvain-la-Neuve, 12-14 September 2005 . pp. 57

Functional evaluation of plant defence signalling against fusarium ear blight disease in arabidopsis

C2 - Non-edited contributions to conferences

Cuzick, A., Lee, S., Urban, M. and Hammond-Kosack, K. E. 2005. Functional evaluation of plant defence signalling against fusarium ear blight disease in arabidopsis. Abstracts 16th International Conference on Arabidopsis Research, Madison, 15-19 June 2005 . pp. No 530

A new potyvirus from Thunberg fritillary (Fritillaria thunbergii Miq.) in Zhejiang, China

A - Papers appearing in refereed journals

Wei, C-B., Chen, J., Zhang, Q-Y., Shi, Y-H., Lin, L., Zheng, H-Y., Adams, M. J. and Chen, J-P. 2005. A new potyvirus from Thunberg fritillary (Fritillaria thunbergii Miq.) in Zhejiang, China. Archives of Virology. 150, pp. 1271-1280.

Evidence that the recessive bymovirus resistance locus rym 4 in barley corresponds to the eukaryotic translation initiation factor 4E gene

A - Papers appearing in refereed journals

Kanyuka, K., Druka, A., Caldwell, D. G., Tymon, A., Mccallum, N., Waugh, R. and Adams, M. J. 2005. Evidence that the recessive bymovirus resistance locus rym 4 in barley corresponds to the eukaryotic translation initiation factor 4E gene. Molecular Plant Pathology. 6 (4), pp. 449-458. https://doi.org/10.1111/J.1364-3703.2005.00294.X

Overview and analysis of the polyprotein cleavage sites in the family Potyviridae

A - Papers appearing in refereed journals

Adams, M. J., Antoniw, J. F. and Beaudoin, F. 2005. Overview and analysis of the polyprotein cleavage sites in the family Potyviridae. Molecular Plant Pathology. 6 (4), pp. 471-487. https://doi.org/10.1111/J.1364-3703.2005.00296.X

Analysis of expressed sequence tags from the wheat leaf blotch pathogen Mycosphaerella graminicola (anamorph Septoria tritici)

A - Papers appearing in refereed journals

Keon, J. P. R., Antoniw, J. F., Rudd, J. J., Skinner, W., Hargreaves, J. A. and Hammond-Kosack, K. E. 2005. Analysis of expressed sequence tags from the wheat leaf blotch pathogen Mycosphaerella graminicola (anamorph Septoria tritici). Fungal Genetics and Biology. 42, pp. 376-389. https://doi.org/10.1016/j.fgb.2004.12.005

The complete sequence of the genomic RNA of an isolate of Lily virus X (genus Potexvirus )

A - Papers appearing in refereed journals

Chen, J., Shi, Y-H., Adams, M. J. and Chen, J-P. 2005. The complete sequence of the genomic RNA of an isolate of Lily virus X (genus Potexvirus ). Archives of Virology. 150, pp. 825-832.

Molecular criteria for genus and species discrimination within the family Potyviridae

A - Papers appearing in refereed journals

Adams, M. J., Antoniw, J. F. and Fauquet, C. M. 2005. Molecular criteria for genus and species discrimination within the family Potyviridae. Archives of Virology. 150 (3), pp. 459-479. https://doi.org/10.1007/s00705-004-0440-6

The use of conventional and quantitative real-time PCR assays for Polymyxa graminis to examine host plant resistance, inoculum levels and intraspecific variation

A - Papers appearing in refereed journals

Ward, E., Kanyuka, K., Motteram, J., Kornyukhin, D. and Adams, M. J. 2005. The use of conventional and quantitative real-time PCR assays for Polymyxa graminis to examine host plant resistance, inoculum levels and intraspecific variation. New Phytologist. 165 (3), pp. 875-885. https://doi.org/10.1111/j.1469-8137.2004.01291.x

Further molecular characterisation of potyviruses infecting aroid plants for medicinal use in China

A - Papers appearing in refereed journals

Shi, Y-H., Hong, X-Y., Chen, J., Adams, M. J., Zheng, H-Y., Lin, L., Qin, B-X. and Chen, J-P. 2005. Further molecular characterisation of potyviruses infecting aroid plants for medicinal use in China. Archives of Virology. 150, pp. 125-135.

DEFRA Wheat Genetic Improvement Network - WGIN (Annual/interim report for DEFRA project AR0709 2003-2004)

D1 - Technical reports: non-confidential

Hammond-Kosack, K. E. 2004. DEFRA Wheat Genetic Improvement Network - WGIN (Annual/interim report for DEFRA project AR0709 2003-2004).

Induction of infection plaques in Oculimacula spp. the cereal eyespot fungi

C2 - Non-edited contributions to conferences

Maguire, K., Dickinson, M., Bowyer, P., Perrone, S., Lucas, J. A. and Hammond-Kosack, K. E. 2004. Induction of infection plaques in Oculimacula spp. the cereal eyespot fungi. Abstracts 7th European Conference on Fungal Genetics, Copenhagen, 17-20 April 2004 .

Les virus des mosaiques transmis aux cereales par Polymyxa graminis

G - Articles in popular magazines and other technical publications

Hariri, D., Le Gouis, J., Ordon, F., Adams, M. J. and Lapierre, H. 2004. Les virus des mosaiques transmis aux cereales par Polymyxa graminis. Phytoma - La Defense des Vegetaux. 575, pp. 41-45.

Exploiting Triticum monococcum as a source of disease resistance traits to important UK fungal and viral pathogens

C2 - Non-edited contributions to conferences

Kornyukhin, D., Kanyuka, K., Lovell, D. J., Maguire, K., West, J. S., Mitrofanova, O. P. and Hammond-Kosack, K. E. 2004. Exploiting Triticum monococcum as a source of disease resistance traits to important UK fungal and viral pathogens. Abstracts Discovery, Development and Delivery in Plant Pathology: 7th Conference of the European Foundation for Plant Pathology and BSPP Presidential Meeting 2004, Aberdeen, 5-10 September 2004 . pp. 54

Can biotechnology and genomics offer better routes to crop protection?

G - Articles in popular magazines and other technical publications

Jones, H. D. and Kanyuka, K. 2004. Can biotechnology and genomics offer better routes to crop protection? Outlooks on Pest Management. 15, pp. 217-221.

Plant pathogens: how can molecular genetic information on plant pathogens assist in breeding disease resistant crops

C1 - Edited contributions to conferences/learned societies

Hammond-Kosack, K. E., Urban, M., Baldwin, T., Daudi, A., Rudd, J. J., Keon, J., Lucas, J. A., Magiure, K., Kornyukhin, D., Jing, H-C., Bass, C. G. and Antoniw, J. F. 2004. Plant pathogens: how can molecular genetic information on plant pathogens assist in breeding disease resistant crops. Fischer, T. (ed.) New Directions for a Diverse Planet: Proceedings 4th International Crop Science Congress, Brisbane, 26 September-1 October 2004 . Regional Institute, Gosford. pp. www.cropscience.org.au

A controlled environment test for resistance to Soil-borne cereal mosaic virus (SBCMV) and its use to determine the mode of inheritance of resistance in wheat cv. Cadenza and for screening Triticum monococcum genotypes for sources of SBCMV resistance

A - Papers appearing in refereed journals

Kanyuka, K., Lovell, D. J., Mitrofanova, O. P., Hammond-Kosack, K. E. and Adams, M. J. 2004. A controlled environment test for resistance to Soil-borne cereal mosaic virus (SBCMV) and its use to determine the mode of inheritance of resistance in wheat cv. Cadenza and for screening Triticum monococcum genotypes for sources of SBCMV resistance. Plant Pathology. 53 (2), pp. 154-160. https://doi.org/10.1111/j.1365-3059.2004.01000.x

Biological and sequence analysis of a novel European isolate of Barley mild mosaic virus that overcomes the barley rym5 resistance gene

A - Papers appearing in refereed journals

Kanyuka, K., Mcgrann, G. R. D., Alhudaib, K., Hariri, D. and Adams, M. J. 2004. Biological and sequence analysis of a novel European isolate of Barley mild mosaic virus that overcomes the barley rym5 resistance gene. Archives of Virology. 149, pp. 1469-1480.

A new potyvirus for tuberose (Polianthes tuberosa) in China

A - Papers appearing in refereed journals

Lin, L., Zheng, H-Y., Chen, J., Chen, J-P., Zhang, Q-Y., Zhao, M-F., Antoniw, J. F. and Adams, M. J. 2004. A new potyvirus for tuberose (Polianthes tuberosa) in China. Archives of Virology. 149, pp. 1107-1116.

The new plant virus family Flexiviridae and assessment of molecular criteria for species demarcation

A - Papers appearing in refereed journals

Adams, M. J., Antoniw, J. F., Bar-Joseph, M., Brunt, A. A., Candresse, T., Foster, G. D., Martelli, G. P., Milne, R. G. and Fauquet, C. M. 2004. The new plant virus family Flexiviridae and assessment of molecular criteria for species demarcation. Archives of Virology. 149, pp. 1045-1060.

Investigating resistance to Barley mild mosaic virus

A - Papers appearing in refereed journals

Mcgrann, G. R. D. and Adams, M. J. 2004. Investigating resistance to Barley mild mosaic virus. Plant Pathology. 53 (2), pp. 161-169. https://doi.org/10.1111/j.1365-3059.2004.00998.x

A virus related to Soybean mosaic virus from Pinellia ternata in China and its comparison with local soybean SMV isolates

A - Papers appearing in refereed journals

Chen, J., Zheng, H-Y., Lin, L., Adams, M. J., Antoniw, J. F., Zhao, M-F., Shang, Y-F. and Chen, J-P. 2004. A virus related to Soybean mosaic virus from Pinellia ternata in China and its comparison with local soybean SMV isolates. Archives of Virology. 149, pp. 349-363.

Detection and classification of allexiviruses from garlic in China

A - Papers appearing in refereed journals

Chen, J., Zheng, H-Y., Antoniw, J. F., Adams, M. J., Chen, J-P. and Lin, L. 2004. Detection and classification of allexiviruses from garlic in China. Archives of Virology. 149, pp. 435-445.

Molecular analysis of Zucchini yellow mosaic virus isolates from Hangzhou, China

A - Papers appearing in refereed journals

Zhao, M-F., Chen, J., Zheng, H-Y., Adams, M. J. and Chen, J-P. 2003. Molecular analysis of Zucchini yellow mosaic virus isolates from Hangzhou, China. Journal of Phytopathology. 151, pp. 307-311.

The performance of winter barley varieties in the presence of barley yellow mosaic virus (BaYMV) and barley mild mosaic virus (BaMMV)(HGCA Project Report No. 300)

D1 - Technical reports: non-confidential

Overthrow, R. and Adams, M. J. 2003. The performance of winter barley varieties in the presence of barley yellow mosaic virus (BaYMV) and barley mild mosaic virus (BaMMV)(HGCA Project Report No. 300). Home Grown Cereals Authority (HGCA) London.

Development of field test kits for the detection of barley yellow mosaic virus and barley mild mosaic virus (HGCA Project Report No. 318)

D1 - Technical reports: non-confidential

Henry, C., Carver, M. and Adams, M. J. 2003. Development of field test kits for the detection of barley yellow mosaic virus and barley mild mosaic virus (HGCA Project Report No. 318). Home Grown Cereals Authority (HGCA) London.

Epidemiology and control of fungally transmitted cereal viruses (Final project report to DEFRA for project CE0526)

D1 - Technical reports: non-confidential

Adams, M. J. 2003. Epidemiology and control of fungally transmitted cereal viruses (Final project report to DEFRA for project CE0526).

Regulation of infection plaque formation in Tapesia spp. the cereal eyespot fungi

C2 - Non-edited contributions to conferences

Maguire, K., Dickinson, M., Bowyer, P., Lucas, J. A. and Hammond-Kosack, K. E. 2003. Regulation of infection plaque formation in Tapesia spp. the cereal eyespot fungi. Abstracts BSPP Presidential Meeting 2003: Plant Pathogen Genomics - from Sequence to Application, Nottingham, 15-18 December 2003 . pp. 42-43

The Fusarium graminearum MAP1 gene is essential for pathogenicity and development of perithecia

A - Papers appearing in refereed journals

Urban, M., Mott, E., Farley, T. and Hammond-Kosack, K. E. 2003. The Fusarium graminearum MAP1 gene is essential for pathogenicity and development of perithecia. Molecular Plant Pathology. 4 (5), pp. 347-359. https://doi.org/10.1046/J.1364-3703.2003.00183.X

Sequence analysis demonstrates that onion yellow dwarf virus isolates from China contain a P3 region much larger than other potyviruses

A - Papers appearing in refereed journals

Chen, J., Adams, M. J., Zheng, H-Y. and Chen, J-P. 2003. Sequence analysis demonstrates that onion yellow dwarf virus isolates from China contain a P3 region much larger than other potyviruses. Archives of Virology. 148, pp. 1165-1173.

Other cereals

B - Book chapters etc edited externally

Henry, M. and Adams, M. J. 2003. Other cereals. in: Loebenstein, G. and Thottappilly, G. (ed.) Viruses and virus-like diseases of major crops in developing countries Kluwer Academic Publishers, Dordrecht, Netherlands. pp. 337-354

Codon usage bias amongst plant viruses

A - Papers appearing in refereed journals

Adams, M. J. and Antoniw, J. F. 2003. Codon usage bias amongst plant viruses. Archives of Virology. 149 (1), pp. 113-135. https://doi.org/10.1007/s00705-003-0186-6

Characterisation of resistance to barley mild mosaic virus

C1 - Edited contributions to conferences/learned societies

Mcgrann, G. R. D. and Adams, M. J. 2003. Characterisation of resistance to barley mild mosaic virus. Rush, C. M. and Merz, U. (ed.) Proceedings 5th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Zurich, 22-25 July 2002 . American Society of Sugar Beet Technologists, Denver. pp. 72-75

A database and web site for plant virus sequence analysis

C1 - Edited contributions to conferences/learned societies

Adams, M. J. and Antoniw, J. F. 2003. A database and web site for plant virus sequence analysis. Rush, C. M. and Merz, U. (ed.) Proceedings 5th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Zurich, 22-25 July 2002 . American Society of Sugar Beet Technologists, Denver. pp. 25-28

Occurrence and sequences of Lily mottle virus and Lily symptomless virus in plants grown from imported bulbs in Zhejiang province, China. Brief report

A - Papers appearing in refereed journals

Zheng, H-Y., Chen, J., Zhao, M-F., Lin, L., Chen, J-P., Antoniw, J. F. and Adams, M. J. 2003. Occurrence and sequences of Lily mottle virus and Lily symptomless virus in plants grown from imported bulbs in Zhejiang province, China. Brief report. Archives of Virology. 148, pp. 2419-2428.

p -Coumaroylnoradrenaline, a novel plant metabolite implicated in tomato defense against pathogens

A - Papers appearing in refereed journals

Von Roepenack-Lahaye, E., Newman, M-A., Schornack, S., Hammond-Kosack, K. E., Lahaye, T., Jones, J. D. G., Daniels, M. J. and Dow, J. M. 2003. p -Coumaroylnoradrenaline, a novel plant metabolite implicated in tomato defense against pathogens. Journal of Biological Chemistry. 278, pp. 43373-43383.

Polymyxa graminis and the cereal viruses it transmits: a research challenge

A - Papers appearing in refereed journals

Kanyuka, K., Ward, E. and Adams, M. J. 2003. Polymyxa graminis and the cereal viruses it transmits: a research challenge. Molecular Plant Pathology. 4 (5), pp. 393-406. https://doi.org/10.1046/J.1364-3703.2003.00177.X

The ability of a bymovirus to overcome the rym4- mediated resistance in barley correlates with a codon change in the VPg coding region on RNA1

A - Papers appearing in refereed journals

Kuhne, T., Shi, N., Proeseler, G., Adams, M. J. and Kanyuka, K. 2003. The ability of a bymovirus to overcome the rym4- mediated resistance in barley correlates with a codon change in the VPg coding region on RNA1. Journal of General Virology. 84 (10), pp. 2853-2859. https://doi.org/10.1099/vir.0.19347-0

Mutations in the huge Arabidopsis gene BIG affect a range of hormone and light responses

A - Papers appearing in refereed journals

Kanyuka, K., Praekelt, U., Franklin, K. A., Billingham, O. E., Hooley, R., Whitelam, G. C. and Halliday, K. J. 2003. Mutations in the huge Arabidopsis gene BIG affect a range of hormone and light responses. The Plant Journal. 35 (1), pp. 57-70. https://doi.org/10.1046/j.1365-313X.2003.01779.x

Molecular characterization of carla- and potyviruses from Narcissus in China

A - Papers appearing in refereed journals

Chen, J., Chen, J. P., Langeveld, S. A., Derks, A. F. L. M. and Adams, M. J. 2003. Molecular characterization of carla- and potyviruses from Narcissus in China. Journal of Phytopathology. 151, pp. 26-29.

Deciphering plant-pathogen communication: fresh perspectives for molecular resistance breeding

A - Papers appearing in refereed journals

Hammond-Kosack, K. E. and Parker, J. E. 2003. Deciphering plant-pathogen communication: fresh perspectives for molecular resistance breeding. Current Opinion in Biotechnology. 14, pp. 177-193.

Identifying pathogenicity genes and developing tools to monitor trichothecene mycotoxin production in Fusarium graminearum and F. culmorum

C2 - Non-edited contributions to conferences

Daudi, A., Urban, M. and Hammond-Kosack, K. E. 2003. Identifying pathogenicity genes and developing tools to monitor trichothecene mycotoxin production in Fusarium graminearum and F. culmorum. Abstracts SCI Student Conference on Advances in Fungal Control Strategies, Bracknell, 29 April 2003 .

Variation between Turnip mosaic virus isolates in Zhejiang Province, China and evidence for recombination

A - Papers appearing in refereed journals

Chen, J., Chen, J. P. and Adams, M. J. 2002. Variation between Turnip mosaic virus isolates in Zhejiang Province, China and evidence for recombination. Journal of Phytopathology. 150, pp. 142-145.

Arabidopsis is susceptible to the cereal ear blight fungal pathogens Fusarium graminearum and Fusarium culmorum

A - Papers appearing in refereed journals

Urban, M., Daniels, S., Mott, E. and Hammond-Kosack, K. E. 2002. Arabidopsis is susceptible to the cereal ear blight fungal pathogens Fusarium graminearum and Fusarium culmorum. The Plant Journal. 32 (6), pp. 961-973. https://doi.org/10.1046/j.1365-313X.2002.01480.x

Responses of some American, European and Japanese wheat cultivars to soil-borne wheat viruses in China

A - Papers appearing in refereed journals

Yang, J-P., Chen, J-P., Cheng, Y., Chen, J., Jiang, H-M., Liu, Q., Yang, K-S., Xu, H. and Adams, M. J. 2002. Responses of some American, European and Japanese wheat cultivars to soil-borne wheat viruses in China. Agricultural Sciences in China. 1, pp. 1141-1150.

The mosaic viruses of winter barley: problems and prospects

C1 - Edited contributions to conferences/learned societies

Adams, M. J. 2002. The mosaic viruses of winter barley: problems and prospects. Proceedings Brighton Crop Protection Conference - Pests and Diseases, 2002 . pp. 105-112

The complete sequence of Oat mosaic virus and evidence for deletion and duplication in RNA2

A - Papers appearing in refereed journals

Zheng, T., Chen, J., Chen, J-P. and Adams, M. J. 2002. The complete sequence of Oat mosaic virus and evidence for deletion and duplication in RNA2. Archives of Virology. 147, pp. 635-642.

Bean common mosaic virus isolates causing different symptoms in asparagus bean in China differ greatly in the 5'-parts of their genomes

A - Papers appearing in refereed journals

Zheng, H., Chen, J., Chen, J-P., Adams, M. J. and Hou, M. 2002. Bean common mosaic virus isolates causing different symptoms in asparagus bean in China differ greatly in the 5'-parts of their genomes. Archives of Virology. 147, pp. 1257-1262.

Characterisation of a potyvirus and a potexvirus from Chinese scallion

A - Papers appearing in refereed journals

Chen, J., Zheng, H-Y., Chen, J. P. and Adams, M. J. 2002. Characterisation of a potyvirus and a potexvirus from Chinese scallion. Archives of Virology. 147, pp. 683-693.

Characterisation of potyviruses from sugarcane and maize in China

A - Papers appearing in refereed journals

Chen, J., Chen, J. P. and Adams, M. J. 2002. Characterisation of potyviruses from sugarcane and maize in China. Archives of Virology. 147, pp. 1237-1246.

Fungi

A - Papers appearing in refereed journals

Adams, M. J. 2002. Fungi. Advances in botanical research. 36, pp. 47-64. https://doi.org/10.1016/S0065-2296(02)36058-0

Fungally-transmitted mosaic viruses of barley

D1 - Technical reports: non-confidential

Adams, M. J. 2002. Fungally-transmitted mosaic viruses of barley.

Characterisation of some carla- and potyviruses from bulb crops in China

A - Papers appearing in refereed journals

Chen, J., Chen, J. P. and Adams, M. J. 2002. Characterisation of some carla- and potyviruses from bulb crops in China. Archives of Virology. 147, pp. 419-428.

Furovirus: unassigned genus

G - Articles in popular magazines and other technical publications

Adams, M. J. 2001. Furovirus: unassigned genus.

Bymovirus: Potyviridae

G - Articles in popular magazines and other technical publications

Adams, M. J. 2001. Bymovirus: Potyviridae.

A universal PCR primer to detect members of the Potyviridae and its use to examine the taxonomic status of several members of the family

A - Papers appearing in refereed journals

Chen, J. and Adams, M. J. 2001. A universal PCR primer to detect members of the Potyviridae and its use to examine the taxonomic status of several members of the family. Archives of Virology. 146, pp. 757-766.

Molecular characterisation of segments 1 to 6 of Rice black-streaked dwarf virus from China provides the complete genome

A - Papers appearing in refereed journals

Zhang, H-M., Chen, J. P. and Adams, M. J. 2001. Molecular characterisation of segments 1 to 6 of Rice black-streaked dwarf virus from China provides the complete genome. Archives of Virology. 146, pp. 2331-2339.

Molecular characterisation of a complex mixture of viruses in garlic with mosaic symptoms in China

A - Papers appearing in refereed journals

Chen, J. and Adams, M. J. 2001. Molecular characterisation of a complex mixture of viruses in garlic with mosaic symptoms in China. Archives of Virology. 146, pp. 1841-1853.

Molecular characterisation of an isolate of Dasheen mosaic virus from Zantedeschia aethiopica in China and comparisons in the genus Potyvirus

A - Papers appearing in refereed journals

Chen, J., Chen, J-P. and Adams, M. J. 2001. Molecular characterisation of an isolate of Dasheen mosaic virus from Zantedeschia aethiopica in China and comparisons in the genus Potyvirus. Archives of Virology. 146, pp. 1821-1829.

Sequence analysis shows that a dwarfing disease on rice, wheat and maize in China is caused by Rice black-streaked dwarf virus

A - Papers appearing in refereed journals

Zhang, H., Chen, J., Lei, J. and Adams, M. J. 2001. Sequence analysis shows that a dwarfing disease on rice, wheat and maize in China is caused by Rice black-streaked dwarf virus. European Journal of Plant Pathology. 107, pp. 563-567.

Sequence analysis shows that Ribgrass mosaic virus Shanghai isolate (RMV-Sh) is closely related to Youcai mosaic virus

A - Papers appearing in refereed journals

Zhu, H., Hong, J., Ye, R., Chen, J., Yu, S. and Adams, M. J. 2001. Sequence analysis shows that Ribgrass mosaic virus Shanghai isolate (RMV-Sh) is closely related to Youcai mosaic virus. Archives of Virology. 146, pp. 1231-1238.

Journal of Phytopathology

A - Papers appearing in refereed journals

Yang, J., Chen, J., Chen. J., Jiang, H., Zhao, Q. and Adams, M. J. 2001. Journal of Phytopathology. Journal of Phytopathology. 149 (3-4), pp. 135-140. https://doi.org/10.1046/j.1439-0434.2001.00598.x

Plant virus transmission by plasmodiophorid fungi is associated with distinctive transmembrane regions of virus-encoded proteins

A - Papers appearing in refereed journals

Adams, M. J., Antoniw, J. F. and Mullins, J. G. L. 2001. Plant virus transmission by plasmodiophorid fungi is associated with distinctive transmembrane regions of virus-encoded proteins. Archives of Virology. 146 (6), pp. 1139-1153. https://doi.org/10.1007/s007050170111

Sequence analysis of a soil-borne wheat mosaic virus isolate from Italy shows that it is the same virus as European wheat mosaic virus and Soil-borne rye mosaic virus

A - Papers appearing in refereed journals

Yang, J., Chen, J., Cheng, Y. and Adams, M. J. 2001. Sequence analysis of a soil-borne wheat mosaic virus isolate from Italy shows that it is the same virus as European wheat mosaic virus and Soil-borne rye mosaic virus. Science in China Series C-Life Sciences. 44 (2), pp. 216-224. https://doi.org/10.1007/BF02879328

Fungally-transmitted mosaic viruses of barley

D1 - Technical reports: non-confidential

Adams, M. J. and Collier, C. R. 2001. Fungally-transmitted mosaic viruses of barley. HGCA/MAFF, London.

Sequence diversity in the coat protein coding region of wheat yellow mosaic bymovirus isolates from China

A - Papers appearing in refereed journals

Chen, J., Du, J. and Adams, M. J. 2000. Sequence diversity in the coat protein coding region of wheat yellow mosaic bymovirus isolates from China. Journal of Phytopathology. 148 (43017), pp. 515-521. https://doi.org/10.1046/j.1439-0434.2000.00555.x

Barley yellow mosaic virus (AAB Descriptions of Plant Viruses No. 374)

G - Articles in popular magazines and other technical publications

Adams, M. J. 2000. Barley yellow mosaic virus (AAB Descriptions of Plant Viruses No. 374).

Differences in cultivar response and complete sequence analysis of two isolates of wheat yellow mosaic bymovirus in China

A - Papers appearing in refereed journals

Chen, J., Chen, J-P., Yang, J-P., Cheng, Y., Diao, A., Adams, M. J. and Du, J. 2000. Differences in cultivar response and complete sequence analysis of two isolates of wheat yellow mosaic bymovirus in China. Plant Pathology. 49 (3), pp. 370-374. https://doi.org/10.1046/j.1365-3059.2000.00466.x

Use of monoclonal antibodies for the serological differentiation of wheat and oat furoviruses

A - Papers appearing in refereed journals

Ye, R., Xu, L., Gao, Z. Z., Yang, J-P., Chen, J., Chen, J. P., Adams, M. J. and Yu, S. Q. 2000. Use of monoclonal antibodies for the serological differentiation of wheat and oat furoviruses. Journal of Phytopathology. 148 (5), pp. 257-262. https://doi.org/10.1046/j.1439-0434.2000.00502.x

Emergence and partial characterization of rice stripe necrosis virus in the Americas

C1 - Edited contributions to conferences/learned societies

Morales, F. J., Lozano, I., Castano, M., Arroyave, J. A. and Adams, M. J. 2000. Emergence and partial characterization of rice stripe necrosis virus in the Americas. Proceedings 4th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Monterey, 6-9 October 1999 . American Society of Sugar Beet Technologists, Denver. pp. 57-60

Sequence analysis of furoviruses of cereals from China and Europe

C1 - Edited contributions to conferences/learned societies

Diao, A., Chen, J-P. and Adams, M. J. 2000. Sequence analysis of furoviruses of cereals from China and Europe. Proceedings 4th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Monterey, 6-9 October 1999 . American Society of Sugar Beet Technologists, Denver. pp. 21-24

Sequence analysis of bymoviruses of wheat and barley in China

C1 - Edited contributions to conferences/learned societies

Chen, J., Chen, J-P., Shi, N., Yang, J-P., Zheng, T., Cheng, Y. and Adams, M. J. 2000. Sequence analysis of bymoviruses of wheat and barley in China. Proceedings 4th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Monterey, 6-9 October 1999 . American Society of Sugar Beet Technologists, Denver. pp. 13-16

Fungally-transmitted mosaic viruses of barley

D1 - Technical reports: non-confidential

Adams, M. J. and Collier, C. R. 2000. Fungally-transmitted mosaic viruses of barley. HGCA/MAFF, London.

Characterisation of Polymyxa transmitting rice stripe necrosis virus in Colombia

C1 - Edited contributions to conferences/learned societies

Adams, M. J. and Ward, E. 2000. Characterisation of Polymyxa transmitting rice stripe necrosis virus in Colombia. Proceedings 4th Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Monterey, 6-9 October 1999 . American Society of Sugar Beet Technologists, Denver. pp. 77-80

Sequences of European wheat mosaic virus and oat golden stripe virus and genome analysis of the genus Furovirus

C2 - Non-edited contributions to conferences

Diao, A. and Adams, M. J. 1999. Sequences of European wheat mosaic virus and oat golden stripe virus and genome analysis of the genus Furovirus. Abstracts British Society of Plant Pathology Presidential Meeting, Oxford, December 1999 .

Influence of variety, drilling date and seeding rate on performance of winter barley varieties grown in the presence of barley mosaic virus. Home-Grown Cereals Authority Project Report No. 203

D1 - Technical reports: non-confidential

Overthrow, R., Carver, M. and Adams, M. J. 1999. Influence of variety, drilling date and seeding rate on performance of winter barley varieties grown in the presence of barley mosaic virus. Home-Grown Cereals Authority Project Report No. 203. H-GCA, London.

Emergence and partial characterization of rice stripe necrosis virus and its fungus vector in South America

A - Papers appearing in refereed journals

Morales, F. J., Ward, E., Castano, M., Arroyave, J. A., Lozano, I. and Adams, M. J. 1999. Emergence and partial characterization of rice stripe necrosis virus and its fungus vector in South America. European Journal of Plant Pathology. 105, pp. 643-650.

Molecular variations of Chinese isolates of barley yellow mosaic bymovirus

G - Articles in popular magazines and other technical publications

Shi, N., Chen, J. and Adams, M. J. 1999. Molecular variations of Chinese isolates of barley yellow mosaic bymovirus. Chinese Journal of Virology. 15, pp. 339-347.

Molecular analysis of barley yellow mosaic virus isolates from China

A - Papers appearing in refereed journals

Chen, J., Shi, N., Cheng, Y., Diao, A., Wilson, T. M. A., Antoniw, J. F. and Adams, M. J. 1999. Molecular analysis of barley yellow mosaic virus isolates from China. Virus Research. 64, pp. 13-21. https://doi.org/10.1016/s0168-1702(99)00076-3

A two-step multiplex RT-PCR method for simultaneous detection of soil-borne wheat mosaic virus and wheat spindle streak mosaic virus from France

A - Papers appearing in refereed journals

Gitton, F., Diao, A., Ducrot, O., Antoniw, J. F., Adams, M. J. and Maraite, H. 1999. A two-step multiplex RT-PCR method for simultaneous detection of soil-borne wheat mosaic virus and wheat spindle streak mosaic virus from France. Plant Pathology. 48 (5), pp. 635-641.

Molecular comparisons amongst wheat bymovirus isolates from Asia, North America and Europe

A - Papers appearing in refereed journals

Chen, J., Sohn, A., Chen, J-P., Lei, J., Cheng, Y., Schulze, S., Steinbiss, H-H., Antoniw, J. F. and Adams, M. J. 1999. Molecular comparisons amongst wheat bymovirus isolates from Asia, North America and Europe. Plant Pathology. 48 (5), pp. 642-647. https://doi.org/10.1046/j.1365-3059.1999.00392.x

The occurrence of barley mild mosaic virus (BaMMV) in China and the nucleotide sequence of its coat protein gene

A - Papers appearing in refereed journals

Zheng, T., Cheng, Y., Chen, J. P., Antoniw, J. F. and Adams, M. J. 1999. The occurrence of barley mild mosaic virus (BaMMV) in China and the nucleotide sequence of its coat protein gene. Journal of Phytopathology. 147 (4), pp. 229-234. https://doi.org/10.1046/j.1439-0434.1999.147004229.x

Characterisation and partial sequence of a new furovirus of wheat in China

A - Papers appearing in refereed journals

Ye, R., Zheng, T., Chen, J., Diao, A., Adams, M. J., Yu, S. and Antoniw, J. F. 1999. Characterisation and partial sequence of a new furovirus of wheat in China. Plant Pathology. 48 (3), pp. 379-387. https://doi.org/10.1046/j.1365-3059.1999.00358.x

Sequences of European wheat mosaic virus and oat golden stripe virus and genome analysis of the genus Furovirus

A - Papers appearing in refereed journals

Diao, A., Chen, J., Gitton, F., Antoniw, J. F., Mullins, J., Hall, A. M. and Adams, M. J. 1999. Sequences of European wheat mosaic virus and oat golden stripe virus and genome analysis of the genus Furovirus. Virology. 261 (2), pp. 331-339. https://doi.org/10.1006/viro.1999.9880

Complete sequence and genome properties of Chinese wheat mosaic virus, a new furovirus from China

A - Papers appearing in refereed journals

Diao, A., Chen, J., Ye, R., Zheng, T., Yu, S., Antoniw, J. F. and Adams, M. J. 1999. Complete sequence and genome properties of Chinese wheat mosaic virus, a new furovirus from China. Journal of General Virology. 80 (5), pp. 1141-1145. https://doi.org/10.1099/0022-1317-80-5-1141

Fungally-transmitted mosaic viruses of barley

D1 - Technical reports: non-confidential

Adams, M. J. and Collier, C. R. 1999. Fungally-transmitted mosaic viruses of barley. Home Grown Cereals Authority (HGCA) London.

Analysis of relationships among the plasmodiophorids using ribosomal DNA sequences and development of PCR primers for the specific detection of Polymyxa species.

C2 - Non-edited contributions to conferences

Ward, E. and Adams, M. J. 1998. Analysis of relationships among the plasmodiophorids using ribosomal DNA sequences and development of PCR primers for the specific detection of Polymyxa species. Abstracts ICPP98 7th International Congress of Plant Pathology, Edinburgh, 9-16 August 1998 . pp. 3.3.51

Preliminary identification of strains of barley yellow mosaic virus by cultivar responses in China

G - Articles in popular magazines and other technical publications

Chen, J. P., Adams, M. J., Zhu, F. and Chen, J. 1998. Preliminary identification of strains of barley yellow mosaic virus by cultivar responses in China. Scientia Agricultura Sinica. 31, pp. 40-45.

The role of virus and vector strains in the epidemiology of barley yellow mosaic virus

G - Articles in popular magazines and other technical publications

Adams, M. J. and Chen, J. P. 1998. The role of virus and vector strains in the epidemiology of barley yellow mosaic virus. CEBC Newsletter. No. 15, pp. 11-12.

Data on plant viruses: a new CD-ROM resource

C2 - Non-edited contributions to conferences

Adams, M. J., Antoniw, J. F., Barker, H., Robinson, D., Jones, A. T. and Murant, A. F. 1998. Data on plant viruses: a new CD-ROM resource. Abstracts ICPP98 7th International Congress of Plant Pathology, Edinburgh, 9-16 August 1998 . pp. 4.3.6

Descriptions of plant viruses on CD-ROM

G - Articles in popular magazines and other technical publications

Adams, M. J., Antoniw, J. F., Barker, H., Jones, A. T., Murant, A. F. and Robinson, D. 1998. Descriptions of plant viruses on CD-ROM.

Analysis of ribosomal DNA sequences of Polymyxa species and related fungi and the development of genus- and species-specific PCR primers

A - Papers appearing in refereed journals

Ward, E. and Adams, M. J. 1998. Analysis of ribosomal DNA sequences of Polymyxa species and related fungi and the development of genus- and species-specific PCR primers. Mycological Research. 102, pp. 965-974.

Fungally-transmitted mosaic viruses of barley

D1 - Technical reports: non-confidential

Adams, M. J. 1998. Fungally-transmitted mosaic viruses of barley. H-GCA, London.

Ultrastructural studies of resting spore development in Polymyxa graminis

A - Papers appearing in refereed journals

Chen, J., Wang, Z., Hong, J., Collier, C. R. and Adams, M. J. 1998. Ultrastructural studies of resting spore development in Polymyxa graminis. Mycological Research. 102, pp. 687-691.

A large duplication in the 3'-untranslated region of a subpopulation of RNA2 of the UK-M isolate of barley mild mosaic bymovirus

A - Papers appearing in refereed journals

Peerenboom, E., Jacobi, V., Cartwright, E. J., Adams, M. J., Steinbiss, H-H. and Antoniw, J. F. 1997. A large duplication in the 3'-untranslated region of a subpopulation of RNA2 of the UK-M isolate of barley mild mosaic bymovirus. Virus Research. 47, pp. 1-6. https://doi.org/10.1016/s0168-1702(96)01388-3

Complete RNA1 sequences of two UK isolates of barley mild mosaic virus: a wild-type fungus-transmissible isolate and a non-fungus-transmissible derivative

A - Papers appearing in refereed journals

Peerenboom, E., Cartwright, E. J., Foulds, I., Adams, M. J., Stratford, R., Rosner, A., Steinbiss, H-H. and Antoniw, J. F. 1997. Complete RNA1 sequences of two UK isolates of barley mild mosaic virus: a wild-type fungus-transmissible isolate and a non-fungus-transmissible derivative. Virus Research. 50, pp. 175-183. https://doi.org/10.1016/s0168-1702(97)00069-5

Occurrence of barley yellow mosaic and barley mild mosaic bymoviruses in Greece

A - Papers appearing in refereed journals

Katis, N. J., Tzavella-Klonari, K. and Adams, M. J. 1997. Occurrence of barley yellow mosaic and barley mild mosaic bymoviruses in Greece. European Journal of Plant Pathology. 103 (3), pp. 281-284. https://doi.org/10.1023/A:1008689308869

Fungally-transmitted mosaic viruses of barley

D1 - Technical reports: non-confidential

Adams, M. J. 1997. Fungally-transmitted mosaic viruses of barley. Home Grown Cereals Authority (HGCA) London.

Strain differences between isolates of barley yellow mosaic virus in China

C1 - Edited contributions to conferences/learned societies

Shi, N., Chen, J., Adams, M. J., Zhu, F., Wang, Z., Wilson, T. M. A., Macfarlane, S. A. and Antoniw, J. F. 1997. Strain differences between isolates of barley yellow mosaic virus in China. Sherwood, J. L. and Rush, C. M. (ed.) Proceedings 3rd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Dundee, 6-7 August 1996 . American Society of Sugar Beet Technologists, Denver. pp. 41-44

Characterisation of UK isolates of barley yellow mosaic virus

C1 - Edited contributions to conferences/learned societies

Shi, N., Adams, M. J., Chen, J., Wilson, T. M. A., Macfarlane, S. A. and Antoniw, J. F. 1997. Characterisation of UK isolates of barley yellow mosaic virus. Sherwood, J. L. and Rush, C. M. (ed.) Proceedings 3rd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Dundee, 6-7 August, 1996 . American Society of Sugar Beet Technologists, Denver. pp. 37-40

A plant virus notebook for IBM-compatible computers

C1 - Edited contributions to conferences/learned societies

Antoniw, J. F., Cartwright, E. and Adams, M. J. 1996. A plant virus notebook for IBM-compatible computers. Sherwood, J. L. and Rush, C. M. (ed.) Proceedings 3rd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Dundee, 6-7 August 1996 . American Society of Sugar Beet Technologists, Denver. pp. 189-192

Development and application of molecular methods for the study of Polymyxa betae

C1 - Edited contributions to conferences/learned societies

Mutasa-Göttgens, E. S., Chwarszczynska, D. M., Williams, G., Ward, E., Adams, M. J. and Asher, M. J. C. 1996. Development and application of molecular methods for the study of Polymyxa betae. Sherwood, J. L. and Rush, C. M. (ed.) Proceedings 3rd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Dundee, 6-7 August 1996 . American Society of Sugar Beet Technologists, Denver. pp. 173-176

Molecular studies of variation amongst isolates of Polymyxa graminis and Polymyxa betae

C1 - Edited contributions to conferences/learned societies

Ward, E. and Adams, M. J. 1996. Molecular studies of variation amongst isolates of Polymyxa graminis and Polymyxa betae. Sherwood, J. L. and Rush, C. M. (ed.) Proceedings 3rd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Dundee, 6-7 August 1996 . American Society of Sugar Beet Technologists, Denver. pp. 93-96

Strand-specific RT-PCR detects replication of BaYMV and BaMMV in leaves and roots

C1 - Edited contributions to conferences/learned societies

Peerenboom, E., Antoniw, J. F., Adams, M. J. and Steinbiss, H-H. 1996. Strand-specific RT-PCR detects replication of BaYMV and BaMMV in leaves and roots. Sherwood, J. L. and Rush, C. M. (ed.) Proceedings 3rd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Dundee, 6-7 August 1996 . American Society of Sugar Beet Technologists, Denver. pp. 181-183

Ultrastructural studies of resting spore development in Polymyxa graminis

C1 - Edited contributions to conferences/learned societies

Chen, J., Wang, Z., Hong, J., Collier, C. R. and Adams, M. J. 1996. Ultrastructural studies of resting spore development in Polymyxa graminis. Sherwood, J. L. and Rush, C. M. (ed.) Proceedings 3rd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Dundee, 6-7 August 1996 . American Society of Sugar Beet Technologists, Denver. pp. 97-100

Barley mild mosaic virus: deletions, duplications and transmission

C1 - Edited contributions to conferences/learned societies

Cartwright, E. J., Rosner, A., Peerenboom, E., Steinbiss, H-H., Antoniw, J. F. and Adams, M. J. 1996. Barley mild mosaic virus: deletions, duplications and transmission. Sherwood, J. L. and Rush, C. M. (ed.) Proceedings 3rd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Dundee, 6-7 August 1996 . American Society of Sugar Beet Technologists, Denver. pp. 9-12

Effects of cultivar and sowing date on the incidence of barley mosaic viruses and on yield

C1 - Edited contributions to conferences/learned societies

Adams, M. J., Overthrow, R. and Carver, M. F. F. 1996. Effects of cultivar and sowing date on the incidence of barley mosaic viruses and on yield. Sherwood, J. L. and Rush, C. M. (ed.) Proceedings 3rd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Dundee, 6-7 August 1996 . American Society of Sugar Beet Technologists, Denver. pp. 113-116

Response of foreign barley cultivars to barley yellow mosaic virus at different sites in China

A - Papers appearing in refereed journals

Chen, J. P., Adams, M. J., Zhu, F. T., Wang, Z. Q., Chen, J., Huang, S. Z. and Zhang, Z. C. 1996. Response of foreign barley cultivars to barley yellow mosaic virus at different sites in China. Plant Pathology. 45 (6), pp. 1117-1125. https://doi.org/10.1046/j.1365-3059.1996.d01-198.x

Sequence analysis of wheat and oat furovirus capsid protein genes suggests that oat golden stripe virus is a strain of soil-borne wheat mosaic virus

A - Papers appearing in refereed journals

Chen, J. P., Shi, N-N., Wilson, T. M. A., Antoniw, J. F., Macfarlane, S. A. and Adams, M. J. 1996. Sequence analysis of wheat and oat furovirus capsid protein genes suggests that oat golden stripe virus is a strain of soil-borne wheat mosaic virus. Virus Research. 41, pp. 179-183. https://doi.org/10.1016/0168-1702(96)01271-3

Fungally-transmitted mosaic viruses of barley

D1 - Technical reports: non-confidential

Adams, M. J. 1996. Fungally-transmitted mosaic viruses of barley.

Single-strand conformation polymorphism analysis of RT-PCR products of UK isolates of barley yellow mosaic virus

A - Papers appearing in refereed journals

Shi, N-N, Chen, J., Wilson, T. M. A., Macfarlane, S. A., Antoniw, J. F. and Adams, M. J. 1996. Single-strand conformation polymorphism analysis of RT-PCR products of UK isolates of barley yellow mosaic virus. Virus Research. 44, pp. 1-9. https://doi.org/10.1016/0168-1702(96)01328-7

Barley yellow mosaic virus. Partial RNA-2(70kDa region), UK resistance-breaking strain isolate 2-4

K - Protein or DNA sequences submitted to database

Adams, M. J. 1996. Barley yellow mosaic virus. Partial RNA-2(70kDa region), UK resistance-breaking strain isolate 2-4.

Barley yellow mosaic virus. Partial RNA-2(70kDa region), UK resistance-breaking strain isolate 2-3

K - Protein or DNA sequences submitted to database

Adams, M. J. 1996. Barley yellow mosaic virus. Partial RNA-2(70kDa region), UK resistance-breaking strain isolate 2-3.

Barley yellow mosaic virus. Partial RNA-2(70kDa region), UK common strain isolate

K - Protein or DNA sequences submitted to database

Adams, M. J. 1996. Barley yellow mosaic virus. Partial RNA-2(70kDa region), UK common strain isolate.

Barley yellow mosaic virus. Partial RNA-1(coat protein), UK resistance-breaking strain isolate 2-4

K - Protein or DNA sequences submitted to database

Adams, M. J. 1996. Barley yellow mosaic virus. Partial RNA-1(coat protein), UK resistance-breaking strain isolate 2-4.

Barley yellow mosaic virus. Partial RNA-1(coat protein), UK resistance-breaking strain isolate 2-3

K - Protein or DNA sequences submitted to database

Adams, M. J. 1996. Barley yellow mosaic virus. Partial RNA-1(coat protein), UK resistance-breaking strain isolate 2-3.

Barley yellow mosaic virus. Partial RNA-1(coat protein), UK common strain isolate

K - Protein or DNA sequences submitted to database

Adams, M. J. 1996. Barley yellow mosaic virus. Partial RNA-1(coat protein), UK common strain isolate.

Barley mild mosaic virus. Complete RNA-2, fungally inoculted isolate

K - Protein or DNA sequences submitted to database

Adams, M. J. 1996. Barley mild mosaic virus. Complete RNA-2, fungally inoculted isolate.

Oat golden stripe virus. Partial RNA-2(coat protein)

K - Protein or DNA sequences submitted to database

Adams, M. J. 1996. Oat golden stripe virus. Partial RNA-2(coat protein).

Soil-borne wheat mosaic virus. Partial RNA-2(coat protein), French isolate

K - Protein or DNA sequences submitted to database

Adams, M. J. 1996. Soil-borne wheat mosaic virus. Partial RNA-2(coat protein), French isolate.

The complete nucleotide sequence of RNA-2 of a fungally-transmitted UK isolate of barley mild mosaic bymovirus and identification of amino acid combinations possibly involved in fungus transmission

A - Papers appearing in refereed journals

Peerenboom, E., Jacobi, V., Antoniw, J. F., Schlichter, U., Cartwright, E. J., Steinbiss, H-H. and Adams, M. J. 1996. The complete nucleotide sequence of RNA-2 of a fungally-transmitted UK isolate of barley mild mosaic bymovirus and identification of amino acid combinations possibly involved in fungus transmission. Virus Research. 40, pp. 149-159. https://doi.org/10.1016/0168-1702(95)01267-2

Soil-borne mosaic viruses in winter barley: effects of variety and management on BaYMV and BaMMV expression. Home-Grown Cereals Authority Project Report No. 123

D1 - Technical reports: non-confidential

Adams, M. J., Overthrow, R. and Carver, M. F. F. 1996. Soil-borne mosaic viruses in winter barley: effects of variety and management on BaYMV and BaMMV expression. Home-Grown Cereals Authority Project Report No. 123. H-GCA, London.

Barley mild mosaic virus. Complete RNA-2, mechanically inoculated isolate

K - Protein or DNA sequences submitted to database

Adams, M. J. 1995. Barley mild mosaic virus. Complete RNA-2, mechanically inoculated isolate.

Studies of UK isolates of barley yellow mosaic virus

C2 - Non-edited contributions to conferences

Shi, N., Adams, M. J., Antoniw, J. F., Chen, J., Macfarlane, S. A. and Wilson, T. M. A. 1995. Studies of UK isolates of barley yellow mosaic virus.

Movement of bymoviruses

C1 - Edited contributions to conferences/learned societies

Schenk, P., Sohn, A., Adams, M. J., Antoniw, J. F. and Steinbiss, H-H. 1995. Movement of bymoviruses. Proceedings International Symposium on 75 Years of Phytopatholgical and Resistance Research at Aschersleben, Aschersleben, 12-16 June 1995 . pp. 148-151

Movement of bymoviruses and functions of RNA2-encoded proteins of barley yellow mosaic virus

A - Papers appearing in refereed journals

Schenk, P., Sohn, A., Adams, M. J., Antoniw, J. F., Hamacher, J. and Steinbiss, H. H. 1995. Movement of bymoviruses and functions of RNA2-encoded proteins of barley yellow mosaic virus. Agronomie. 15, pp. 387-391.

Development of PCR for the detection of Polymyxa betae in sugar beet roots and its application in field studies

A - Papers appearing in refereed journals

Mutasa-Göttgens, E. S., Chwarszczynska, D. M., Adams, M. J., Ward, E. and Asher, M. J. C. 1995. Development of PCR for the detection of Polymyxa betae in sugar beet roots and its application in field studies. Physiological and Molecular Plant Pathology. 47 (5), pp. 303-313. https://doi.org/10.1006/pmpp.1995.1060

An analysis of differential display shows a strong bias towards high copy number mRNAs

A - Papers appearing in refereed journals

Bertioli, D. J., Schlichter, U. H. A., Adams, M. J., Burrows, P. R., Steinbiss, H-H and Antoniw, J. F. 1995. An analysis of differential display shows a strong bias towards high copy number mRNAs. Nucleic Acids Research. 23, pp. 4520-4523. https://doi.org/10.1093/nar/23.21.4520

Fungally-transmitted mosaic viruses of barley

G - Articles in popular magazines and other technical publications

Adams, M. J. 1995. Fungally-transmitted mosaic viruses of barley.

Use of the most probable number technique to quantify soil-borne plant pathogens

A - Papers appearing in refereed journals

Adams, M. J. and Welham, S. J. 1995. Use of the most probable number technique to quantify soil-borne plant pathogens. Annals of Applied Biology - AAB. 126 (1), pp. 181-196. https://doi.org/10.1111/j.1744-7348.1995.tb05014.x

Molecular characterisation of UK isolates of barley yellow mosaic bymovirus

A - Papers appearing in refereed journals

Shi, N-N., Zhu, M., Chen, J., Stratford, R., Wilson, T. M. A., Antoniw, J. F., Foulds, I. J., Macfarlane, S. A. and Adams, M. J. 1995. Molecular characterisation of UK isolates of barley yellow mosaic bymovirus. Virus Research. 38, pp. 193-204. https://doi.org/10.1016/0168-1702(95)00057-W

Cloning and sequence analysis of RNA-2 of a mechanically transmitted UK isolate of barley mild mosaic bymovirus (BaMMV)

A - Papers appearing in refereed journals

Jacobi, V., Peerenboom, E., Schenk, P. M., Antoniw, J. F., Steinbiss, H-H and Adams, M. J. 1995. Cloning and sequence analysis of RNA-2 of a mechanically transmitted UK isolate of barley mild mosaic bymovirus (BaMMV). Virus Research. 37, pp. 99-111. https://doi.org/10.1016/0168-1702(95)00024-k

Movement of barley mild mosaic and barley yellow mosaic viruses in leaves and roots of barley

A - Papers appearing in refereed journals

Schenk, P. M., Antoniw, J. F., Batista, M De F., Jacobi, V., Adams, M. J. and Steinbiss, H. H. 1995. Movement of barley mild mosaic and barley yellow mosaic viruses in leaves and roots of barley. Annals of Applied Biology - AAB. 126 (2), pp. 291-305. https://doi.org/10.1111/j.1744-7348.1995.tb05367.x

Molecular characterisation of Polymyxa species

G - Articles in popular magazines and other technical publications

Ward, E. and Adams, M. J. 1995. Molecular characterisation of Polymyxa species. BBSRC Science Brief. 2, p. 3.

Mycoplasma-like organism 16S RNA

K - Protein or DNA sequences submitted to database

Adams, M. J. 1994. Mycoplasma-like organism 16S RNA.

Beet cryptic virus ds RNA2. Complete sequence

K - Protein or DNA sequences submitted to database

Adams, M. J. 1994. Beet cryptic virus ds RNA2. Complete sequence.

Characterisation of Polymyxa species by restriction analysis of PCR-amplified ribosomal DNA

A - Papers appearing in refereed journals

Ward, E., Adams, M. J., Mutasa-Göttgens, E. S., Collier, C. R. and Asher, M. J. C. 1994. Characterisation of Polymyxa species by restriction analysis of PCR-amplified ribosomal DNA. Plant Pathology. 43 (5), pp. 872-877. https://doi.org/10.1111/j.1365-3059.1994.tb01631.x

Partial resistance to barley mild mosaic virus in barley cv. Sprite

D1 - Technical reports: non-confidential

Adams, M. J. 1994. Partial resistance to barley mild mosaic virus in barley cv. Sprite. Wiley.

Infection of cereals and grasses by isolates of Polymyxa graminis (Plasmodiophorales)

A - Papers appearing in refereed journals

Adams, M. J. and Jacquier, C. 1994. Infection of cereals and grasses by isolates of Polymyxa graminis (Plasmodiophorales). Annals of Applied Biology - AAB. 125 (1), pp. 53-60. https://doi.org/10.1111/j.1744-7348.1994.tb04946.x

Fungally-transmitted mosaic viruses of barley

D1 - Technical reports: non-confidential

Adams, M. J. 1994. Fungally-transmitted mosaic viruses of barley.

Variabilite du genre Polymyxa : etudes biologiques et genomiques

C2 - Non-edited contributions to conferences

Adams, M. J., Ward, E. and Mutasa-Göttgens, E. S. 1994. Variabilite du genre Polymyxa : etudes biologiques et genomiques. Proceedings ITCF Meeting Les Mosaiques des Cereales Transmises par Polymyxa graminis, Blois, April 1994 . pp. 27-28

12 potato disease cycles (pictures produced from slides)

G - Articles in popular magazines and other technical publications

Hide, G. A., Adams, M. J., Lapwood, D. H., Read, P. J. and Castle, L. M. 1993. 12 potato disease cycles (pictures produced from slides).

A sensitive DNA probe for the detection of Polymyxa betae in sugar beet roots

A - Papers appearing in refereed journals

Mutasa-Göttgens, E. S., Ward, E., Adams, M. J., Collier, C. R., Chwarszczynska, D. M. and Asher, M. J. C. 1993. A sensitive DNA probe for the detection of Polymyxa betae in sugar beet roots. Physiological and Molecular Plant Pathology. 43 (5), pp. 379-390. https://doi.org/10.1006/pmpp.1993.1066

Development of molecular methods for the identification of Polymyxa species

C1 - Edited contributions to conferences/learned societies

Ward, E., Mutasa-Göttgens, E. S., Adams, M. J., Collier, C. R. and Asher, M. J. C. 1993. Development of molecular methods for the identification of Polymyxa species. Hirucki, C. (ed.) Proceedings 2nd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Denver, 1993 . American Society of Sugar Beet Technologists, Denver. pp. 87-90

Detection and quantification of viruses and their vectors in soil

C1 - Edited contributions to conferences/learned societies

Adams, M. J. 1993. Detection and quantification of viruses and their vectors in soil. Hirucki, C. (ed.) Proceedings 2nd Symposium of the International Working Group on Plant Viruses with Fungal Vectors, Denver, 1993 . American Society of Sugar Beet Technologists, Denver. pp. 145-148

Biological and molecular differences between isolates of Polymyxa species

C2 - Non-edited contributions to conferences

Adams, M. J., Ward, E., Mutasa-Göttgens, E. S., Barr, K. J., Collier, C. R. and Asher, M. J. C. 1993. Biological and molecular differences between isolates of Polymyxa species. Abstracts 6th International Congress of Plant Pathology, Montreal, 28th July - 6th August 1993 . pp. 277

Development of molecular identification methods for Polymyxa isolates

C2 - Non-edited contributions to conferences

Ward, E., Mutasa-Göttgens, E. S., Collier, C. R., Adams, M. J. and Asher, M. J. C. 1993. Development of molecular identification methods for Polymyxa isolates. Abstracts 6th International Congress of Plant Pathology, Montreal, 28th July - 6th August 1993 . pp. 38

The effect of cereal break crops on barley mild mosaic virus

A - Papers appearing in refereed journals

Adams, M. J., Jones, D. R., O'Neill, T. M. and Hill, S. A. 1993. The effect of cereal break crops on barley mild mosaic virus. Annals of Applied Biology - AAB. 123 (1), pp. 37-45. https://doi.org/10.1111/j.1744-7348.1993.tb04070.x

Fungally-transmitted mosaic viruses of barley

D1 - Technical reports: non-confidential

Adams, M. J. 1993. Fungally-transmitted mosaic viruses of barley.

Responses of some Asian and European barley cultivars to UK and Chinese isolates of soil-borne barley mosaic viruses

A - Papers appearing in refereed journals

Chen, J-P., Adams, M. J., Zhu, F., Shi, C. and Chen, He 1992. Responses of some Asian and European barley cultivars to UK and Chinese isolates of soil-borne barley mosaic viruses. Annals of Applied Biology - AAB. 121 (3), pp. 631-639. https://doi.org/10.1111/j.1744-7348.1992.tb03472.x

Soil-borne mosaic viruses in winter barley: effects of variety and management

D1 - Technical reports: non-confidential

Adams, M. J., Grylls, J., Hill, S. A., Jones, D. R. and Morris, T. I. 1992. Soil-borne mosaic viruses in winter barley: effects of variety and management. Home Grown Cereals Authority (HGCA) London.

Zoospore ultrastructure of Polymyxa graminis

A - Papers appearing in refereed journals

Chen, J-P. and Adams, M. J. 1992. Zoospore ultrastructure of Polymyxa graminis. Acta Mycologica Sinica. 11, pp. 216-220.

Effects of the environment on transmission and symptom expression in the soil-borne barley mosaic viruses

C2 - Non-edited contributions to conferences

Adams, M. J. and Plumb, R. T. 1992. Effects of the environment on transmission and symptom expression in the soil-borne barley mosaic viruses. Abstracts Viruses, Vectors and the Environment. ISPP 5th International Plant Virus Epidemiology Symposium, Valenzano (Bari), Italy , 27-31 July 1992. pp. 37

Localisation of barley mild mosaic virus in infected barley cells by immuno-colloidal gold labelling

A - Papers appearing in refereed journals

Chen, J-P. and Adams, M. J. 1992. Localisation of barley mild mosaic virus in infected barley cells by immuno-colloidal gold labelling. Virologica Sinica. 7, pp. 207-215.

Effect of nitrogen rate and timing on barley yellow mosaic virus

C1 - Edited contributions to conferences/learned societies

Jones, D. R., Adams, M. J., Morris, T. I. and Grylls, J. 1992. Effect of nitrogen rate and timing on barley yellow mosaic virus. Nitrate and Farming Systems. Aspects of Applied Biology .

Soil-borne mosaic viruses of cereals: the UK situation

G - Articles in popular magazines and other technical publications

Adams, M. J. and Hill, S. A. 1992. Soil-borne mosaic viruses of cereals: the UK situation.

Fungally-transmitted mosaic viruses of barley

D1 - Technical reports: non-confidential

Adams, M. J. 1992. Fungally-transmitted mosaic viruses of barley.

Phytolacca antiviral protein. Complete sequence of cDNA clone

K - Protein or DNA sequences submitted to database

Adams, M. J. 1991. Phytolacca antiviral protein. Complete sequence of cDNA clone.

Studies on UK isolates of barley yellow mosaic virus

C1 - Edited contributions to conferences/learned societies

Adams, M. J., Swaby, A. G. and Jones, P. 1991. Studies on UK isolates of barley yellow mosaic virus.

Barley mild mosaic virus inside its fungal vector, Polymyxa graminis

A - Papers appearing in refereed journals

Chen, J., Swaby, A. G., Adams, M. J. and Ruan, Y. 1991. Barley mild mosaic virus inside its fungal vector, Polymyxa graminis. Annals of Applied Biology - AAB. 118, pp. 615-621.

Serological relationships between five fungally transmitted cereal viruses and other elongated viruses

A - Papers appearing in refereed journals

Chen Jianping and Adams, M. J. 1991. Serological relationships between five fungally transmitted cereal viruses and other elongated viruses. Plant Pathology. 40, pp. 226-231.

Fungally-transmitted mosaic viruses of barley

D1 - Technical reports: non-confidential

Adams, M. J. 1991. Fungally-transmitted mosaic viruses of barley. UKCPVS Committee, Cambridge..

Transmission of plant viruses by fungi

A - Papers appearing in refereed journals

Adams, M. J. 1991. Transmission of plant viruses by fungi. Annals of Applied Biology - AAB. 118 (2), pp. 479-492. https://doi.org/10.1111/j.1744-7348.1991.tb05649.x

Host range and transmission of barley viruses by isolates of %Polymyxa graminis$

C1 - Edited contributions to conferences/learned societies

Adams, M. J. 1991. Host range and transmission of barley viruses by isolates of %Polymyxa graminis$. Koenig, R. (ed.) In %Proceedings of the first Symposium of the International Working Group on Plant Virus and Fungal Vectors$. Ulmer, Stutgart.

The distribution of barley yellow mosaic virus (BaYMV) and barley mild mosaic virus (BaMMV) in UK winter barley samples, 1987-1990

A - Papers appearing in refereed journals

Adams, M. J. 1991. The distribution of barley yellow mosaic virus (BaYMV) and barley mild mosaic virus (BaMMV) in UK winter barley samples, 1987-1990. Plant Pathology. 40 (1), pp. 53-58. https://doi.org/10.1111/j.1365-3059.1991.tb02292.x

Epidemiology of fungally-transmitted viruses

A - Papers appearing in refereed journals

Adams, M. J. 1990. Epidemiology of fungally-transmitted viruses. Soil Use and Management. 6 (4), pp. 184-189. https://doi.org/10.1111/j.1475-2743.1990.tb00833.x

Barley yellow mosaic virus (BaYMV) and BaYMV-M: two different viruses.

A - Papers appearing in refereed journals

Huth, W. and Adams, M. J. 1990. Barley yellow mosaic virus (BaYMV) and BaYMV-M: two different viruses. Intervirology. 31, pp. 38-42.

Barley yellow dwarf virus (BaYMV) and BaYMV-M: two different viruses.

A - Papers appearing in refereed journals

Huth, W. and Adams, M. J. 1990. Barley yellow dwarf virus (BaYMV) and BaYMV-M: two different viruses. Intervirology. 31, pp. 38-42.

Fungally-transmitted mosaic diseases of barley.

G - Articles in popular magazines and other technical publications

Adams, M. J. 1989. Fungally-transmitted mosaic diseases of barley.

RNA/cDNA hybridization studies of UK isolates of barley yellow mosaic virus.

A - Papers appearing in refereed journals

Batista, M. F., Antoniw, J. F., Swaby, J. F., Jones, P. and Adams, M. J. 1989. RNA/cDNA hybridization studies of UK isolates of barley yellow mosaic virus. Plant Pathology. 38 (2), pp. 226-229. https://doi.org/10.1111/j.1365-3059.1989.tb02137.x

Fungally-transmitted viruses of cereals in the UK.

A - Papers appearing in refereed journals

Adams, M. J., Batista, M. De. F., Swaby, A. G. and Antoniw, J. F. 1989. Fungally-transmitted viruses of cereals in the UK. Bulletin EPPO. 19, pp. 573-577. https://doi.org/10.1111/j.1365-2338.1989.tb00434.x

Barley yellow mosaic virus (BaYMV): transmission, diagnosis and properties of UK strains.

C2 - Non-edited contributions to conferences

Adams, M. J., Jones, P. M. and Plumb, R. T. 1988. Barley yellow mosaic virus (BaYMV): transmission, diagnosis and properties of UK strains. Abstracts 5th International Congress of Plant Pathology, Kyoto, 1988, 46.

Control of potato gangrene by thiabendazole in relation to time of harvest after haulm destruction and site of production

A - Papers appearing in refereed journals

Carnegie, S. F., Hide, G. A., Ruthven, A. D., Lindsay, D. A. and Adams, M. J. 1988. Control of potato gangrene by thiabendazole in relation to time of harvest after haulm destruction and site of production. Annals of Applied Biology - AAB. 113 (3), pp. 471-481. https://doi.org/10.1111/j.1744-7348.1988.tb03325.x

Purification and some properties of golden oat stripe virus.

A - Papers appearing in refereed journals

Adams, M. J., Jones, P. and Swaby, A. G. 1988. Purification and some properties of golden oat stripe virus. Annals of Applied Biology - AAB. 112 (2), pp. 285-290. https://doi.org/10.1111/j.1744-7348.1988.tb02064.x

Evidence for virus transmission by plasmodiophorid vectors.

C1 - Edited contributions to conferences/learned societies

Adams, M. J. 1988. Evidence for virus transmission by plasmodiophorid vectors. Viruses with fungal vectors. Eds J.I. Cooper & M.J.C. Asher. Wellesbourne : Association of Applied Biologists. pp. 203-212

Factors affecting the production and motility of zoospores of Polymyxa graminis and their transmission of barley yellow mosaic virus (BaYMV).

A - Papers appearing in refereed journals

Adams, M. J. and Swaby, A. G. 1988. Factors affecting the production and motility of zoospores of Polymyxa graminis and their transmission of barley yellow mosaic virus (BaYMV). Annals of Applied Biology - AAB. 112, pp. 69-78.

Occurrence of two strains of barley yellow mosaic virus in England.

A - Papers appearing in refereed journals

Adams, M. J., Swaby, A. G. and Jones, P. 1988. Occurrence of two strains of barley yellow mosaic virus in England. Plant Pathology. 36 (4), pp. 610-612. https://doi.org/10.1111/j.1365-3059.1987.tb02284.x

Confirmation of the transmission of barley yellow mosaic virus (BaYMV) by the fungus Polymyxa graminis.

A - Papers appearing in refereed journals

Adams, M. J., Swaby, A. G. and Jones, P. 1988. Confirmation of the transmission of barley yellow mosaic virus (BaYMV) by the fungus Polymyxa graminis. Annals of Applied Biology - AAB. 112 (1), pp. 133-141. https://doi.org/10.1111/j.1744-7348.1988.tb02048.x

The effect of cultivar used as host for Polymyxa graminis on the multiplication and transmission of barley yellow mosaic virus (BaYMV).

A - Papers appearing in refereed journals

Adams, M. J., Jones, P. and Swaby, A. G. 1987. The effect of cultivar used as host for Polymyxa graminis on the multiplication and transmission of barley yellow mosaic virus (BaYMV). Annals of Applied Biology - AAB. 110 (2), pp. 321-327. https://doi.org/10.1111/j.1744-7348.1987.tb03262.x

The effect of irrigation on powdery scab and other tuber diseases of potatoes.

A - Papers appearing in refereed journals

Adams, M. J., Read, P. J., Lapwood, D. H., Cayley, G. R. and Hide, G. A. 1987. The effect of irrigation on powdery scab and other tuber diseases of potatoes. Annals of Applied Biology - AAB. 110 (2), pp. 287-294. https://doi.org/10.1111/j.1744-7348.1987.tb03258.x

The susceptibility of barley cultivars to barley yellow mosaic virus (BaYMV) and its fungal vector, Polymyxa graminis .

A - Papers appearing in refereed journals

Adams, M. J., Swaby, A. G. and Macfarlane, I. 1986. The susceptibility of barley cultivars to barley yellow mosaic virus (BaYMV) and its fungal vector, Polymyxa graminis . Annals of Applied Biology - AAB. 109 (3), pp. 561-572. https://doi.org/10.1111/j.1744-7348.1986.tb03213.x

Sampling potatoes for the incidence of tuber diseases and the levels of inoculum

A - Papers appearing in refereed journals

Adams, M. J., Hide, G. A. and Lapwood, D. H. 1985. Sampling potatoes for the incidence of tuber diseases and the levels of inoculum. Annals of Applied Biology - AAB. 107 (2), pp. 189-203. https://doi.org/10.1111/j.1744-7348.1985.tb01562.x

Infection of potato stems by the gangrene pathogen, phoma-exigua var foveata

A - Papers appearing in refereed journals

Adams, M. J. 1983. Infection of potato stems by the gangrene pathogen, phoma-exigua var foveata. Annals of Applied Biology - AAB. 102 (1), pp. 79-87. https://doi.org/10.1111/j.1744-7348.1983.tb02667.x

The effect of temperature before or after inoculation with phoma-exigua var foveata on the development of gangrene in potato-tubers

A - Papers appearing in refereed journals

Adams, M. J. and Griffith, R. L. 1983. The effect of temperature before or after inoculation with phoma-exigua var foveata on the development of gangrene in potato-tubers. Plant Pathology. 32 (3), pp. 325-333. https://doi.org/10.1111/j.1365-3059.1983.tb02840.x

Transmission of Fusarium solani var. coeruleum and F. sulphureum from seed potatoes to progeny tubers in the field

A - Papers appearing in refereed journals

Adams, M. J. and Lapwood, D. H. 1983. Transmission of Fusarium solani var. coeruleum and F. sulphureum from seed potatoes to progeny tubers in the field. Annals of Applied Biology - AAB. 103 (3), pp. 411-417. https://doi.org/10.1111/j.1744-7348.1983.tb02778.x

The effect of temerature before or after inoculation with Phoma exigua var. foveata on the development of gangrene in potato tubers

A - Papers appearing in refereed journals

Adams, M. J. and Griffith, R. L. 1983. The effect of temerature before or after inoculation with Phoma exigua var. foveata on the development of gangrene in potato tubers. Plant Pathology. 32, pp. 325-333.

The effect of Erwinia cartotovora subspecies atroseptica on potato plants II Compensatory growth

A - Papers appearing in refereed journals

Adams, M. J. and Lapwood, D. H. 1983. The effect of Erwinia cartotovora subspecies atroseptica on potato plants II Compensatory growth. Annals of Applied Biology - AAB. 103 (1), pp. 79-85. https://doi.org/10.1111/j.1744-7348.1983.tb02743.x

Effects of common scab Streptomyces scabies on potatoes

A - Papers appearing in refereed journals

Adams, M. J. and Hide, G. A. 1981. Effects of common scab Streptomyces scabies on potatoes. Annals of Applied Biology - AAB. 98, pp. 211-216.

The role of seed tuber and stem inoculum in the development of gangrene in potatoes

A - Papers appearing in refereed journals

Adams, M. J. 1980. The role of seed tuber and stem inoculum in the development of gangrene in potatoes. Annals of Applied Biology - AAB. 96 (1), pp. 17-28. https://doi.org/10.1111/j.1744-7348.1980.tb04764.x

Wounds as entry points for phoma-exigua var foveata (gangrene)

A - Papers appearing in refereed journals

Adams, M. J. 1980. Wounds as entry points for phoma-exigua var foveata (gangrene). Annals of Applied Biology - AAB. 96 (3), pp. 370-371.

Relationships between disease levels on seed tubers, on crops during growth and in stored potatoes .3. Silver scurf

A - Papers appearing in refereed journals

Hide, G. A. and Adams, M. J. 1980. Relationships between disease levels on seed tubers, on crops during growth and in stored potatoes .3. Silver scurf. Potato research. 23 (2), pp. 229-240. https://doi.org/10.1007/bf02356271

Relationships between disease levels on seed tubers, on crops during growth and in stored potatoes .2. Skin spot

A - Papers appearing in refereed journals

Hide, G. A. and Adams, M. J. 1980. Relationships between disease levels on seed tubers, on crops during growth and in stored potatoes .2. Skin spot. Potato research. 23 (2), pp. 215-227. https://doi.org/10.1007/bf02356270

The significance of tuber damage and inoculum concentration of Phoma exigua var. foveata in the developemnt of gangrene in stored potato tubers

A - Papers appearing in refereed journals

Adams, M. J. 1980. The significance of tuber damage and inoculum concentration of Phoma exigua var. foveata in the developemnt of gangrene in stored potato tubers. Annals of Applied Biology - AAB. 95 (1), pp. 31-40. https://doi.org/10.1111/j.1744-7348.1980.tb03967.x

The rule of seed-tuber and stem inoculum on the development of gangrene in potatoes

A - Papers appearing in refereed journals

Adams, M. J. 1980. The rule of seed-tuber and stem inoculum on the development of gangrene in potatoes. Annals of Applied Biology - AAB. 96, pp. 17-28.

Relationships between disease levels on seed tubers on crops during growth and in stored potatoes 5 Seed stocks grown at Rothamsted

A - Papers appearing in refereed journals

Adams, M. J. and Hide, G. A. 1980. Relationships between disease levels on seed tubers on crops during growth and in stored potatoes 5 Seed stocks grown at Rothamsted. Potato research. 23, pp. 291-302.

Relationships between disease levels on seed tubers on crops during growth and in stored potatoes 4 Gangrene and soft rot

A - Papers appearing in refereed journals

Adams, M. J., Legg, P. R., Lapwood, D. H. and Hide, G. A. 1980. Relationships between disease levels on seed tubers on crops during growth and in stored potatoes 4 Gangrene and soft rot. Potato research. 23, pp. 277-289.

Relationships between disease levels on seed tubers on crops during growth and in stored potatoes I. Introduction and black scurf

A - Papers appearing in refereed journals

Adams, M. J., Hide, G. A. and Lapwood, D. H. 1980. Relationships between disease levels on seed tubers on crops during growth and in stored potatoes I. Introduction and black scurf. Potato research. 23, pp. 201-214.

Possibilities of forecasting potato storage diseases from tests on seed tuber and crop samples

A - Papers appearing in refereed journals

Lapwood, D. H., Bell, F., Harris, R. I., Hide, G. A. and Adams, M. J. 1979. Possibilities of forecasting potato storage diseases from tests on seed tuber and crop samples. Plant Pathology. 28 (4), pp. 181-190. https://doi.org/10.1111/j.1365-3059.1979.tb01124.x

Factors affecting the survival of Phoma exigma var foreata in soil

A - Papers appearing in refereed journals

Adams, M. J. 1979. Factors affecting the survival of Phoma exigma var foreata in soil. Transactions of the British Mycological Society. 73, pp. 91-97.

Studies on the lenticel development, surface microflora and infection by common scab (Streptomyces scabies) of potato tubers growing in wet and dry soils

A - Papers appearing in refereed journals

Adams, M. J. and Lapwood, D. H. 1978. Studies on the lenticel development, surface microflora and infection by common scab (Streptomyces scabies) of potato tubers growing in wet and dry soils. Annals of Applied Biology - AAB. 90 (3), pp. 335-343. https://doi.org/10.1111/j.1744-7348.1978.tb02641.x

The period of susceptibility of red beet to Streptomyces scab

A - Papers appearing in refereed journals

Adams, M. J. and Lapwood, D. H. 1978. The period of susceptibility of red beet to Streptomyces scab. Plant Pathology. 27 (2), pp. 97-98. https://doi.org/10.1111/j.1365-3059.1978.tb01086.x

The effect of harvest date and duration of wound healing conditions on the susceptibility of damaged potato tubers to infection by Phoma exigua - gangrene

A - Papers appearing in refereed journals

Adams, M. J. and Griffith, R. L. 1978. The effect of harvest date and duration of wound healing conditions on the susceptibility of damaged potato tubers to infection by Phoma exigua - gangrene. Annals of Applied Biology - AAB. 88 (1), pp. 51-55. https://doi.org/10.1111/j.1744-7348.1978.tb00678.x

Methods of measuring prevalence of phoma-exigua on potatoes and in soil

A - Papers appearing in refereed journals

Hide, G. A., Griffith, R. L. and Adams, M. J. 1977. Methods of measuring prevalence of phoma-exigua on potatoes and in soil. Annals of Applied Biology - AAB. 87 (1), pp. 7-&. https://doi.org/10.1111/j.1744-7348.1977.tb00653.x

Susceptibility of red beet cultivars to streptomyces scab

A - Papers appearing in refereed journals

Lapwood, D. H., Adams, M. J. and Crisp, A. F. 1976. Susceptibility of red beet cultivars to streptomyces scab. Plant Pathology. 25 (1), pp. 31-&. https://doi.org/10.1111/j.1365-3059.1976.tb01911.x

The growth of red beet and its infection by Streptomyces spp.

A - Papers appearing in refereed journals

Adams, M. J., Lapwood, D. H. and Rankin, B. 1976. The growth of red beet and its infection by Streptomyces spp. Plant Pathology. 25, pp. 145-151.

Potato tuber lenticels : susceptibility to infection by Erwinia cartovora var. atroseptica and Phytophthora infestans

A - Papers appearing in refereed journals

Adams, M. J. 1975. Potato tuber lenticels : susceptibility to infection by Erwinia cartovora var. atroseptica and Phytophthora infestans. Annals of Applied Biology - AAB. 79 (3), pp. 275-282. https://doi.org/10.1111/j.1744-7348.1975.tb01583.x

Potato tuber lenticels: development and structure

A - Papers appearing in refereed journals

Adams, M. J. 1975. Potato tuber lenticels: development and structure. Annals of Applied Biology - AAB. 79 (3), pp. 265-273. https://doi.org/10.1111/j.1744-7348.1975.tb01582.x

The effect of a few days rain on the distribution of common scab Streptomyces scabies on younger potato tubers

A - Papers appearing in refereed journals

Lapwood, D. H. and Adams, M. J. 1973. The effect of a few days rain on the distribution of common scab Streptomyces scabies on younger potato tubers. Annals of Applied Biology - AAB. 73, pp. 277-283.