SAS-H: Systems Modelling

TitleSAS-H: Systems Modelling
TypeResearch cluster

Outputs

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How Tillage System Affects the Soil Carbon Dioxide Emission and Wheat Plants Physiological State

A - Papers appearing in refereed journals
Sawinska, Z., Radzikowska-Kujawska, D., Blecharczyk, A., Switek, S., Piechota, T., Cieslak, A., Cardenas, L. M., Louro-Lopez, A., Gregory, A. S., Coleman, K. and Lark, R. M. 2024. How Tillage System Affects the Soil Carbon Dioxide Emission and Wheat Plants Physiological State. Agronomy. 14 (10), p. 2220. https://doi.org/10.3390/agronomy14102220

Integrating human behaviour and epidemiological modelling: unlocking the remaining challenges

A - Papers appearing in refereed journals
Hill, E. M., Ryan, M., Haw, D., Lynche, M. P., McCabe, R., Milne, A. E., Turner, M. S., Vedhara, K., Zeng, F., Barons, M. J., Nixon, E. J., Parnell, S. and Bolton, K. J. 2024. Integrating human behaviour and epidemiological modelling: unlocking the remaining challenges. Mathematics in Medical and Life Sciences. 1 (1), p. 2429479. https://doi.org/10.1080/29937574.2024.2429479

How the Global Burden of Animal Diseases links to the Global Burden of Crop Loss: a food systems perspective

A - Papers appearing in refereed journals
Szyniszewska, A. M., Simpkins, K. M., Thomas, L., Beale, T., Milne, A. E., Brown, M. E., Taylor, B., Oliver, G., Bebber, D. P., Woolman, T., Mahmood, S., Murphy, C., Huntington, B. and Finegold, C. 2024. How the Global Burden of Animal Diseases links to the Global Burden of Crop Loss: a food systems perspective. Scientific and Technical Review. 43, pp. 177-188. https://doi.org/10.20506/rst.43.3530

Identifying pathways to more sustainable farming using archetypes and Multi-Objective Optimisation

A - Papers appearing in refereed journals
Butikofer, L., Goodwin, C. E., Varma, V., Evans, P. M., Redhead, J. W., Bullock, J. M., Pywell, R. F., Mead, A., Richter, G. M. and Storkey, J. 2024. Identifying pathways to more sustainable farming using archetypes and Multi-Objective Optimisation. Ecological Indicators. 166 (sept), p. 112433. https://doi.org/10.1016/j.ecolind.2024.112433

A dataset of CMIP6-based climate scenarios for climate change impact assessment in Great Britain

A - Papers appearing in refereed journals
Semenov, M. A., Senapati, N., Coleman, K. and Collins, A. L. 2024. A dataset of CMIP6-based climate scenarios for climate change impact assessment in Great Britain. Data in Brief. 55 (4 July), p. 110709. https://doi.org/10.1016/j.dib.2024.110709

Threeruns Carabid dataset

N - Datasets
Jowett, K., Milne, A. E., Garrett, D., Blumgart, D., Potts, S. G., Senapathi, D. and Storkey, J. 2024. Threeruns Carabid dataset. Rothamsted Research. https://doi.org/10.23637/rothamsted.990y0

Using a multi-scale approach to examine the effects of field margins and landscape features on predatory carabid communities in crop fields

A - Papers appearing in refereed journals
Jowett, K., Milne, A. E., Garrett, D., Blumgart, D., Potts, S. G., Senapathi, D. and Storkey, J. 2024. Using a multi-scale approach to examine the effects of field margins and landscape features on predatory carabid communities in crop fields . Agriculture, Ecosystems & Environment. 373 (1 October), p. 109115. https://doi.org/10.1016/j.agee.2024.109115

A framework for evaluating the value of agricultural pest management decision support systems

A - Papers appearing in refereed journals
Helps, J., Van den Bosch, F., Paveley, N., Jorgensen, L. N., Holst, N. and Milne, A. E. 2024. A framework for evaluating the value of agricultural pest management decision support systems. European Journal of Plant Pathology. https://doi.org/10.1007/s10658-024-02878-1

Exploration of data for analysis using boundary line methodology

A - Papers appearing in refereed journals
Miti, C., Milne, A. E., Giller, K. E., Sadras, V. O. and Lark, R. M. 2024. Exploration of data for analysis using boundary line methodology. Computers and Electronics in Agriculture. 219, p. 108794. https://doi.org/10.1016/j.compag.2024.108794

An agrogeophysical modelling framework for the detection of soil compaction spatial variability due to grazing using field-scale electromagnetic induction data.

A - Papers appearing in refereed journals
Romero-Ruiz, A., O'Leary, D., Daly, E., Tuohy, P., Milne, A. E., Coleman, K. and Whitmore, A. P. 2024. An agrogeophysical modelling framework for the detection of soil compaction spatial variability due to grazing using field-scale electromagnetic induction data. Soil Use and Management. 40 (2), p. e13039. https://doi.org/10.1111/sum.13039

Implications and impacts of aligning regional agriculture with a healthy diet

A - Papers appearing in refereed journals
Sharp, R., Bellamy, A. S., Clear, A., Finnigan, S. M., Furness, E., Meador, E., Metcalfe, H., Mills, S., Coleman, K., Whitmore, A. P. and Milne, A. E. 2024. Implications and impacts of aligning regional agriculture with a healthy diet. Journal of Cleaner Production. 449, p. 141375. https://doi.org/10.1016/j.jclepro.2024.141375

The Concepts and quantification of yield gap using boundary lines. A review

A - Papers appearing in refereed journals
Miti, C., Milne, A. E., Giller, K. E. and Lark, R. M. 2024. The Concepts and quantification of yield gap using boundary lines. A review. Field Crops Research. 311 (1 May), p. 109365. https://doi.org/10.1016/j.fcr.2024.109365

Stepwise model parametrisation using satellite imagery and hemispherical photography: Tuning AquaCrop sensitive parameters for improved winter wheat yield predictions in semi-arid regions

A - Papers appearing in refereed journals
Oulaid, B., Milne, A. E., Waine, T., Alami, R. E., Rafiqi, M. and Corstanje, R. 2024. Stepwise model parametrisation using satellite imagery and hemispherical photography: Tuning AquaCrop sensitive parameters for improved winter wheat yield predictions in semi-arid regions. Field Crops Research. 309, p. 109327. https://doi.org/10.1016/j.fcr.2024.109327

Soil Map of Rothamsted Estate

N - Datasets
Avery, B. W., Catt, J. A., Coleman, K., Pino-Chandia, L. and Ostler, R. 2024. Soil Map of Rothamsted Estate. Rothamsted Research. https://doi.org/10.23637/rothamsted.98z89

Trade-offs constrain the success of glyphosate-free farming.

A - Papers appearing in refereed journals
Metcalfe, H., Storkey, J., Hull, R. I., Bullock, J. M., Whitmore, A. P., Sharp, R. and Milne, A. E. 2023. Trade-offs constrain the success of glyphosate-free farming. Scientific Reports. 14, p. 8001. https://doi.org/10.1038/s41598-024-58183-8

Host map of Ash trees in Great Britain

N - Datasets
Brown, N., Alonso Chavez, V., Milne, A. E. and Parnell, S. 2023. Host map of Ash trees in Great Britain. Rothamsted Research. https://doi.org/10.23637/rothamsted.98y37

Grazing livestock move by Levy walks: Implications for soil health and environment

A - Papers appearing in refereed journals
Romero-Ruiz, A., Rivero, M. J., Milne, A. E., Morgan, S., De-Meo-Filho, P., Pulley, S., Segura, C., Harris, P., Lee, M. R. F., Coleman, K., Cardenas, L. M. and Whitmore, A. P. 2023. Grazing livestock move by Levy walks: Implications for soil health and environment. Journal of Environmental Management. 345 (1), p. 118835. https://doi.org/10.1016/j.jenvman.2023.118835

Bioenergy crop production and carbon sequestration potential under changing climate and land use - A case study in the upper River Taw catchment in southwest England

A - Papers appearing in refereed journals
Dixit, P. N., Richter, G. M., Coleman, K. and Collins, A. L. 2023. Bioenergy crop production and carbon sequestration potential under changing climate and land use - A case study in the upper River Taw catchment in southwest England. Science of the Total Environment. 900 (20 Nov), p. 166390. https://doi.org/10.1016/j.scitotenv.2023.166390

Promoting dietary changes for achieving health and sustainability targets

A - Papers appearing in refereed journals
Bellamy, A. S., Furness, E., Mills, S., Clear, A., Finnigan, S. M., Meador, J. E., Milne, A. E. and Sharp, R. T. 2023. Promoting dietary changes for achieving health and sustainability targets. Frontiers in Sustainable Food Systems. 7, p. 1160627. https://doi.org/10.3389/fsufs.2023.1160627

Explainable neural networks for trait-based multispecies distribution modelling—A case study with butterflies and moths

A - Papers appearing in refereed journals
Bourhis, Y., Bell, J. R., Shortall, C. R., Kunin, W. and Milne, A. E. 2023. Explainable neural networks for trait-based multispecies distribution modelling—A case study with butterflies and moths. Methods in ecology and evolution. 14 (6), pp. 1531-1542. https://doi.org/10.1111/2041-210X.14097

Evidence of collaborative opportunities to ensure long-term sustainability in African farming

A - Papers appearing in refereed journals
El-Fartassi, I., Milne, A. E., El Alami, R., Rafiqi, M., Hassall, K. L., Waine, T., Zawadzka, J., Diarra, A. and Corstanje, R. 2023. Evidence of collaborative opportunities to ensure long-term sustainability in African farming. Journal of Cleaner Production. 392, p. 136170. https://doi.org/10.1016/j.jclepro.2023.136170

Effect of different organic amendments on actual and achievable yields in a cereal-based cropping system

A - Papers appearing in refereed journals
Albano, X., Whitmore, A. P., Sakrabani, O., Thomas, C. L., Sizmur, T., Ritz, K., Harris, J., Pawlett, M., Watts, C. W. and Haefele, S. M. 2023. Effect of different organic amendments on actual and achievable yields in a cereal-based cropping system. Journal of Soil Science and Plant Nutrition. 23, pp. 2122-2137. https://doi.org/10.1007/s42729-023-01167-w

Modelling changes in soil structure caused by livestock treading

A - Papers appearing in refereed journals
Romero-Ruiz, A., Monaghan. R, Milne, A. E., Coleman, K., Cardenas, L. M., Segura, C. and Whitmore, A. P. 2023. Modelling changes in soil structure caused by livestock treading. Geoderma. 431, p. 116331. https://doi.org/10.1016/j.geoderma.2023.116331

Optimal control of organic matter applications

A - Papers appearing in refereed journals
Putelat, T. and Whitmore, A. P. 2023. Optimal control of organic matter applications . European Journal of Agronomy. 143, p. 126713. https://doi.org/10.1016/j.eja.2022.126713

A loss function to evaluate agricultural decision‑making under uncertainty: a case study of soil spectroscopy

A - Papers appearing in refereed journals
Breure, T., Haefele, S. M., Hannam, J. A., Corstanje, R., Webster, R., Moreno-Rojas, S. and Milne, A. E. 2022. A loss function to evaluate agricultural decision‑making under uncertainty: a case study of soil spectroscopy. Precision Agriculture. 23, pp. 1333 - 1353. https://doi.org/10.1007/s11119-022-09887-2

Communication and building social capital in community supported agriculture

A - Papers appearing in refereed journals
Furness, E., Bellamy, A. S., Clear, A., Finnigan, S. M., Meador, J. E., Mills, S., Milne, A. E. and Sharp, R. T. 2022. Communication and building social capital in community supported agriculture. Journal of Agriculture, Food Systems, and Community Development. 12 (1), pp. 63-78. https://doi.org/10.5304/jafscd.2022.121.009

Early Detection and Spread of Tomato Powdery Mildew (TPM) in Commercial Greenhouses

A - Papers appearing in refereed journals
Sokolidi, A., Webster, R., Milne, A. E., Clark, S. J., Clarkson, J., Bielik M., Morley, P. and West, J. S. 2022. Early Detection and Spread of Tomato Powdery Mildew (TPM) in Commercial Greenhouses. Phytopathology. 112 (11), pp. 49-49.

Spatial characteristics of the fungus powdery mildew (Erysiphe neolycopersici) on tomatoes and its spread in industrial greenhouses

A - Papers appearing in refereed journals
Sokolidi, A., Webster, R., Milne, A. E., Bielik, M., Morley, P., Clarkson, J. P. and West, J. S. 2022. Spatial characteristics of the fungus powdery mildew (Erysiphe neolycopersici) on tomatoes and its spread in industrial greenhouses. Biostatistics. 1 (1), pp. 18-30.

Multi-tier archetypes to characterise British landscapes, farmland and farming practices

A - Papers appearing in refereed journals
Goodwin, C. E. D., Butikofer, L., Hatfield, J. H., Evans, P. M., Bullock, J. M., Storkey, J., Mead, A., Richter, G. M., Henrys, P. A., Pywell, R. F. and Redhead, J. W. 2022. Multi-tier archetypes to characterise British landscapes, farmland and farming practices. Environmental Research Letters. 17 (9), p. 095002. https://doi.org/10.1088/1748-9326/ac810e

Translating and applying a simulation model to enhance understanding of grassland management

A - Papers appearing in refereed journals
Giannitsopoulos, M. L., Burgess, P. J., Bell, M. J., Richter, G. M., Topp, C. F. E., Ingram, J. and Takahashi, T. 2022. Translating and applying a simulation model to enhance understanding of grassland management. Grass and Forage Science. https://doi.org/10.1111/gfs.12584

Early Detection and Spread of Tomato Powdery Mildew (TPM) in Commercial Greenhouses

Conference poster
Sokolidi, A., Webster, R., Milne, A. E., Clark, S. J., Clarkson, J., Bielik M., Morley, P. and West, J. S. 2022. Early Detection and Spread of Tomato Powdery Mildew (TPM) in Commercial Greenhouses. APS AGM - Plant Health 2022. Pittsburgh, Pennsylvania, USA 06 Aug 2022

Decisions, uncertainty and spatial information

A - Papers appearing in refereed journals
Lark, R. M., Chagumaira, C. and Milne, A. E. 2022. Decisions, uncertainty and spatial information. Spatial Statistics. 50, p. 100619. https://doi.org/10.1016/j.spasta.2022.100619

Cereal grain mineral micronutrient and soil chemistry data from GeoNutrition surveys in Ethiopia and Malawi

A - Papers appearing in refereed journals
Kumssa, D. B., Mossa, A. W., Amede, T., Ander, E. L., Botoman, E. H. B., Chagumaira, C., Chimungu, J. G., Davies, K. G., Gameda, S., Haefele, S. M., Hailu, K., Joy, E. J. M., Lark, R. M., Ligowe, I. S., McGrath, S. P., Milne, A. E., Muleya, P., Munthal, M., Towett, E., Walsh, M. G., Wilson, L., D.Young, S., Haji, I. R., Broadley, M., Gashu, D. and Nalivata, P. C. 2022. Cereal grain mineral micronutrient and soil chemistry data from GeoNutrition surveys in Ethiopia and Malawi. Scientific Data. 9 (1), p. 443. https://doi.org/10.1038/s41597-022-01500-5

An overlooked mechanism underlying the attenuated temperature response of soil heterotrophic respiration

A - Papers appearing in refereed journals
Zhang, X., Whalley, P. A., Gregory, A. S., Whalley, W. R., Coleman, K., Neal, A. L., Mooney, S. J., Soga, K. and Illangasekare, T. H. 2022. An overlooked mechanism underlying the attenuated temperature response of soil heterotrophic respiration. Journal of the Royal Society Interface. 19 (192), p. 20220276. https://doi.org/10.1098/rsif.2022.0276

Yearly occurrence of 544 species of moths (UK 1990-2019), with trait values and putative environmental drivers.

N - Datasets
Bourhis, Y., Bell, J. R., Shortall, C. R. and Milne, A. E. 2022. Yearly occurrence of 544 species of moths (UK 1990-2019), with trait values and putative environmental drivers. Rothamsted Research. https://doi.org/10.23637/rothamsted.988z5

Modelling the Persistence of Weed Populations

B - Book chapters etc edited externally
Storkey, J., Gardarin, A., Colbach, N., Metcalfe, H. and Milne, A. E. 2022. Modelling the Persistence of Weed Populations. in: Upadhyaya, M. K., Clements, D. R. and Shrestha, A. (ed.) Persistence Strategies of Weeds Wiley. pp. Chapter 9

Soil and landscape factors influence geospatial variation in maize grain zinc concentration in Malawi

A - Papers appearing in refereed journals
Botoman, L., Chagumaira, C., Mossa, A. W., Amede, T., Ander, E. L., Bailey, E. H., Chimungu, J. G., Gameda, S., Gashu, D., Haefele, S. M., Joy, E. J. M., Kumssa, D. B., Ligowe, I. S., McGrath, S. P., Milne, A. E., Munthali, M., Towett, E., Walsh, M. G., Wilson, L., Young, S. D., Broadley, M. R., Lark, R. M. and Nalivata, P. C. 2022. Soil and landscape factors influence geospatial variation in maize grain zinc concentration in Malawi. Scientific Reports. 12, p. 7986. https://doi.org/10.1038/s41598-022-12014-w

Absence of a home‑field advantage within a short‑rotation arable cropping system

A - Papers appearing in refereed journals
Whitmore, A. P., Mortimer, S., Shu, X. and Sizmur, T. 2022. Absence of a home‑field advantage within a short‑rotation arable cropping system. Plant and Soil. https://doi.org/10.1007/s11104-022-05419-z

Stakeholder interpretation of probabilistic representations of uncertainty in spatial information an example on the nutritional quality of staple

A - Papers appearing in refereed journals
Chagumaira, C., Nalivata, P. C., Chimungu, J. G., Gashu, D., Broadley, M., Milne, A. E. and Lark, R. M. 2022. Stakeholder interpretation of probabilistic representations of uncertainty in spatial information an example on the nutritional quality of staple. International Journal Of Geographical Information Science. 36 (12), pp. 2446-2472. https://doi.org/10.1080/13658816.2021.2020278

Communicating Carabids: Engaging farmers to encourage uptake of Integrated Pest Management.

A - Papers appearing in refereed journals
Jowett, K., Milne, A. E., Potts, S. G., Senapathi, D. and Storkey, J. 2022. Communicating Carabids: Engaging farmers to encourage uptake of Integrated Pest Management. Pest Management Science. 78 (6), pp. 2477-2491. https://doi.org/10.1002/ps.6878

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