Biointeractions and Crop Protection
| Title | Biointeractions and Crop Protection |
|---|---|
| Type | Science Department |
| Institute | Rothamsted Research |
| Head | Lin Field |
| Executive Assistant | Sheila Bishop |
Outputs
Sort by: Date Title
Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen
A - Papers appearing in refereed journals
Chen, H., King, R., Smith, D., Bayon, C., Ashfield, T., Torriani, S., Kanyuka, K., Hammond-Kosack, K. E., Bieri, S. and Rudd, J. J. 2023. Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen. BMC Biology. 21, p. 24. https://doi.org/10.1186/s12915-023-01520-6
Reducing dietary acrylamide exposure from wheat products through crop management and imaging
A - Papers appearing in refereed journals
Oddy, J., Addy, J., Mead, A., Hall, C., Mackay, C., Ashfield, T., Mcdiarmid, F., Curtis, T. Y., Raffan, S., Wilkinson, M. D., Elmore, J. S., Cryer, N., Moreira de Almeida, I. and Halford, N. G. 2023. Reducing dietary acrylamide exposure from wheat products through crop management and imaging. Journal of Agricultural and Food Chemistry - JAFC. 71 (7), pp. 3403-3413. https://doi.org/10.1021/acs.jafc.2c07208
Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen
N - Datasets
Chen, H., King, R., Smith, D., Bayon, C., Ashfield, T., Torriani, S., Kanyuka, K., Hammond-Kosack, K. E., Bieri, S. and Rudd, J. J. 2022. Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen. Rothamsted Research. https://doi.org/10.23637/rothamsted.98q90
Vegetable Crop Improvement Through CRISPR Technology for Food Security
B - Book chapters etc edited externally
Bhattacharya, J., Chaitanya, A. K., Hegde, N., Singh, S., Kour, A. and Nitnavare, R. 2022. Vegetable Crop Improvement Through CRISPR Technology for Food Security. in: Wani, S. H and Hensel, G. (ed.) Genome Editing - Current Technology Advances and Applications for Crop Improvement Switzerland Springer. pp. 27-53
(−)-Adaline from the Adalia Genus of Ladybirds Is a Potent Antagonist of Insect and Specific Mammalian Nicotinic Acetylcholine Receptors
A - Papers appearing in refereed journals
Richards, D. P., Patel, R. H., Duce, I. R., Khambay, B. P. S., Birkett, M. A., Pickett, J. A. and Mellor, I. R. 2022. (−)-Adaline from the Adalia Genus of Ladybirds Is a Potent Antagonist of Insect and Specific Mammalian Nicotinic Acetylcholine Receptors. Molecules. 27 (20), p. 7074. https://doi.org/10.3390/molecules27207074
Induction of distinct plant cell death programs by secreted proteins from the wheat pathogen Zymoseptoria tritici
A - Papers appearing in refereed journals
Welch, T., Bayon, C., Rudd, J. J., Kanyuka, K. and Kettles, G. J. 2022. Induction of distinct plant cell death programs by secreted proteins from the wheat pathogen Zymoseptoria tritici. Scientific Reports. 12, p. 17880. https://doi.org/10.1038/s41598-022-22660-9
A large bioassay identifies Stb resistance genes that provide broad resistance against Septoria tritici blotch Disease in the UK
A - Papers appearing in refereed journals
Tidd, H., Rudd, J. J., Ray, R. V., Bryant, R. and Kanyuka, K. 2022. A large bioassay identifies Stb resistance genes that provide broad resistance against Septoria tritici blotch Disease in the UK. Frontiers in Plant Science. 13, p. 1070986. https://doi.org/10.3389/fpls.2022.1070986
Roger Blackman 1941-2022 an appreciation
A - Papers appearing in refereed journals
Harrington, R., Polaszek, A., Watson, G. W., Kanturski, M., Favret, C. and Ouvard, D. 2022. Roger Blackman 1941-2022 an appreciation. Zootaxa. 5183 (1), pp. 7-21. https://doi.org/10.11646/ZOOTAXA.5183.1.4
Doublesex homolog is sex-specifically spliced and governs the sexual differentiation process in the whitefly Bemisia tabaci AsiaII-1
A - Papers appearing in refereed journals
Brar, G. S., Singh, S., Shukla, J. N., Kumar, V. J., Davies, T. G. E., Kaur, G., Pandher, S and Kaur, R. 2022. Doublesex homolog is sex-specifically spliced and governs the sexual differentiation process in the whitefly Bemisia tabaci AsiaII-1. Gene. 850, p. 146929. https://doi.org/10.1016/j.gene.2022.146929
Apoplastic and vascular defences
A - Papers appearing in refereed journals
Darino, M., Kanyuka, K. and Hammond-Kosack, K. E. 2022. Apoplastic and vascular defences. Essays in Biochemistry. 66 (5), pp. 595-605. https://doi.org/10.1042/EBC20220159
Proanthocyanidin Biosynthesis in the Developing Wheat Seed Coat Investigated by Chemical and RNA-seq Analysis
A - Papers appearing in refereed journals
Phillips, A. L., Vaughan, S., Baker, J., Primavesi, L. F., Patil, A., King, R., Hassani-Pak, K., Kulasekaran, S., Coghill, J., Ward, J. L. and Huttly, A. K. 2022. Proanthocyanidin Biosynthesis in the Developing Wheat Seed Coat Investigated by Chemical and RNA-seq Analysis. Plant Direct. 6 (10), p. e453. https://doi.org/10.1002/pld3.453
Novel molecules and target genes for vegetative heat tolerance in wheat
A - Papers appearing in refereed journals
Rose, T., Wilkinson, M. D., Lowe, C., Xu, J., Hughes, D. J., Hassall, K. L., Hassani-Pak, K., Amberkar, S., Noleto-Dias, C., Ward, J. L. and Heuer, S. 2022. Novel molecules and target genes for vegetative heat tolerance in wheat. Plant Environmental Interactions. 3 (6), pp. 264-289. https://doi.org/10.1002/pei3.10096
Working with UK farmers to investigate anecic earthworm middens and soil biophysical properties
A - Papers appearing in refereed journals
Stroud, J. L., Dummett, I., Kemp, S. J. and Sturrock, C. J. 2022. Working with UK farmers to investigate anecic earthworm middens and soil biophysical properties. Annals of Applied Biology - AAB. https://doi.org/10.1111/aab.12795
P450 gene duplication and divergence led to the evolution of dual novel functions and insecticide cross-resistance in the brown planthopper Nilaparvata lugens
A - Papers appearing in refereed journals
Duarte, A., Pym, A., Garrood, W. T., Troczka, B. J., Zimmer, C. T., Davies, T. G. E., Nauen, R., O'Reilly, O. A. and Bass, C. G. 2022. P450 gene duplication and divergence led to the evolution of dual novel functions and insecticide cross-resistance in the brown planthopper Nilaparvata lugens. PLOS Genetics. 18 (6), p. e1010279. https://doi.org/10.1371/journal.pgen.1010279
Development of Plant-Based Vaccines for Prevention of Avian Influenza and Newcastle Disease in Poultry.
A - Papers appearing in refereed journals
Nurzijah, I., Elbohy, O. A., Kanyuka, K., Daly, J. M. and Dunham, S. 2022. Development of Plant-Based Vaccines for Prevention of Avian Influenza and Newcastle Disease in Poultry. Vaccines. 10 (3), p. 478. https://doi.org/10.3390/vaccines10030478
FANCM promotes class I interfering crossovers and suppresses class II non-interfering crossovers in wheat meiosis
A - Papers appearing in refereed journals
Desjardins, D. S., Simmonds, J., Guterman, I., Kanyuka, K., Burridge, A. J., Tock, A. J., Sanchez-Moran, E., Franklin, F. C. H., Henderson, I. R., Edwards, K. J., Uauy, C. and Higgins, J. D. 2022. FANCM promotes class I interfering crossovers and suppresses class II non-interfering crossovers in wheat meiosis. Nature Communications. 13, p. 3644. https://doi.org/10.1038/s41467-022-31438-6
Neotropical maize genotypes with different levels of benzoxazinoids affect fall armyworm development
A - Papers appearing in refereed journals
Michereff, M., Nascimento, I. N., Santana, G. T., Sarria, A. L. F., Borges, M., Laumann, R. A., Withall, D., Caulfield, J. C., Birkett, M. A. and Blassioli-Moraes, C. 2022. Neotropical maize genotypes with different levels of benzoxazinoids affect fall armyworm development. Physiological Entomology. 47 (4), pp. 232-241. https://doi.org/10.1111/phen.12392
Dissecting weed adaptation: fitness and trait correlations in herbicide resistant Alopecurus myosuroides
A - Papers appearing in refereed journals
Comont, D., Macgregor, D., Crook, L., Hull, R. I., Nguyen, L., Freckleton, R. P., Childs, D. Z. and Neve, P. 2022. Dissecting weed adaptation: fitness and trait correlations in herbicide resistant Alopecurus myosuroides. Pest Management Science. 78 (7), pp. 3039-3050. https://doi.org/10.1002/ps.6930
The effects of brief heat during early booting on reproductive, developmental and chlorophyll physiological performance in common wheat (Triticum aestivum L.)
A - Papers appearing in refereed journals
Xu, J., Lowe, C., Hernandez-Leon, S. G., Dreisigacker, S., Reynolds, M. P., Valenzuela-Soto, E. M., Paul, M. J. and Heuer, S. 2022. The effects of brief heat during early booting on reproductive, developmental and chlorophyll physiological performance in common wheat (Triticum aestivum L.). Frontiers in Plant Science. 13, p. 886541. https://doi.org/10.3389/fpls.2022.886541
Enantiomeric Discrimination in Insects: The Role of OBPs and ORs
A - Papers appearing in refereed journals
Sims, C., Birkett, M. A. and Withall, D. 2022. Enantiomeric Discrimination in Insects: The Role of OBPs and ORs. Insects. 13 (4), p. 368. https://doi.org/10.3390/insects13040368
Computational investigation of aphid odorant receptor structure and binding function
A - Papers appearing in refereed journals
Sims, C., Withall, D., Oldham, N., Stockman, R. and Birkett, M. A. 2022. Computational investigation of aphid odorant receptor structure and binding function. Journal of Biomolecular Structure and Dynamics. 41 (8), pp. 3647-3658. https://doi.org/10.1080/07391102.2022.2053743
Understanding the Molecular Basis of Disease Resistance Against Septoria Tritici Blotch in Wheat
F - Theses
Stephens, C. 2022. Understanding the Molecular Basis of Disease Resistance Against Septoria Tritici Blotch in Wheat. F - Theses University of Nottingham School of Biosciences
The blackgrass genome reveals patterns of non-parallel evolution of polygenic herbicide resistance
A - Papers appearing in refereed journals
Cai, L., Comont, D., Macgregor, D., Lowe, C., Beffa, R., Saski, C. A. and Neve, P. 2022. The blackgrass genome reveals patterns of non-parallel evolution of polygenic herbicide resistance. New Phytologist. https://doi.org/10.1111/nph.18655
Virus-mediated protein overexpression (VOX) in monocots to identify and functionally characterize fungal effectors
B - Book chapters etc edited externally
Kanyuka, K. 2022. Virus-mediated protein overexpression (VOX) in monocots to identify and functionally characterize fungal effectors. in: Kufer, T. and Kaparakis-Liaskos, M. (ed.) Effector-triggered immunity Humana Press Inc. pp. 2523 p 93–112
Virus-induced gene silencing in wheat and related monocot species
B - Book chapters etc edited externally
Panwar, V. and Kanyuka, K. 2022. Virus-induced gene silencing in wheat and related monocot species. in: Mysore, K. S. and Senthil-Kumar, M. (ed.) Plant Gene Silencing Humana Press Inc.
Quantifying the impacts of the neonicotinoid restriction on oilseed rape pest control and productivity
F - Theses
Coston, D. 2021. Quantifying the impacts of the neonicotinoid restriction on oilseed rape pest control and productivity. F - Theses
Fitness Cost Associated With Enhanced EPSPS Gene Copy Number and Glyphosate Resistance in an Amaranthus tuberculatus Population
A - Papers appearing in refereed journals
Cockerton, H. m., Kaundun, S. S., Nguyen, L., Hutchings, S. J., Dale, R. P., Howell, A. and Neve, P. 2021. Fitness Cost Associated With Enhanced EPSPS Gene Copy Number and Glyphosate Resistance in an Amaranthus tuberculatus Population. Frontiers in Plant Science. 12, p. 651381. https://doi.org/10.3389/fpls.2021.651381
The occurrence of herbicide-resistant Avena fatua (wild oats) populations to ACCase-inhibiting herbicides in Ireland
A - Papers appearing in refereed journals
Byrne, R., Vijaya Bhaskar, A. V., Spink, J., Freckleton, R., Neve, P. and Barth, S. 2021. The occurrence of herbicide-resistant Avena fatua (wild oats) populations to ACCase-inhibiting herbicides in Ireland. Irish Journal of Agricultural and Food Research. pp. 1-6. https://doi.org/10.15212/ijafr-2020-0127
Lack of an Intron in Cytochrome b and Overexpression of Sterol 14 alpha-Demethylase Indicate a Potential Risk for QoI and DMI Resistance Development in Neophysopella spp. on Grapes
A - Papers appearing in refereed journals
Santos, R. F., Amorium, L., Wood, A. K. M., Bibiano, L. B. J. and Fraaije, B. A. 2021. Lack of an Intron in Cytochrome b and Overexpression of Sterol 14 alpha-Demethylase Indicate a Potential Risk for QoI and DMI Resistance Development in Neophysopella spp. on Grapes. Phytopathology. 111 (10), pp. 1726-1734. https://doi.org/10.1094/PHYTO-11-20-0514-R
Integrated pest management strategies for cabbage stem flea beetle (Psylliodes chrysocephala) in oilseed rape
A - Papers appearing in refereed journals
Ortega-Ramos, P., Coston, D., Seimandi-Corda, G., Mauchline, A. L. and Cook, S. M. 2021. Integrated pest management strategies for cabbage stem flea beetle (Psylliodes chrysocephala) in oilseed rape. Global Change Biology. Bioenergy. 14 (3), pp. 267-286. https://doi.org/10.1111/gcbb.12918
Phylogenomic analysis of a 55.1-kb 19-gene dataset resolves a monophyletic Fusarium that includes the Fusarium solani species complex.
A - Papers appearing in refereed journals
Geiser, D. M., Al-Hatmi, A. M. S., Aoki, T., Arie, T., Balmas, V., Barnes, I., Bergstrom, G. C., Bhattacharyya, M. K., Blomquist, C. L., Bowden, R. L., Brankovics, B., Brown, D. W., Burgess, L. W., Bushley, K., Busman, M., Cano-Lira, J. F., Carrillo, J. D., Chang, H., Chen, C., Chen, W., Chilvers, M., Chulze, S., Coleman, J. J., Cuomo, C. A., De Beer, Z. W., De Hoog, G. S., Del Castillo-Munera, J., Del Ponte, E. M., Dieguez-Uribeondo, J., Di Pietro, A., Edel-Hermann, V., Elmer, W. H., Epstein, L., Eskalen, A., Esposto, M. C., Everts, K. L., Fernandez-Pavía, S. P., Ferreira-Da-Silva, G., Foroud, N. A., Fourie, G., Frandsen, R. J. N., Freeman, S., Freitag, M., Frenkel, O., Fuller, K. K., Gagkaeva, T., Gardiner, D. M., Glenn, A. E., Gold, S. E., Gordon, T. R., Gregory, N. F., Gryzenhout, M., Guarro, J., Gugino, B. K., Gutierrez, S., Hammond-Kosack, K. E., Harris, L. J., Homa, M., Hong, C., Hornok, L., Huang, J., Ilkit, M., Jacobs, A., Jacobs, K., Jiang, C., Del Mar Jimenez-Gasco, M., Kang, S., Kasson, M. T., Kazan, K., Kennell, J. C., Kim, H., Kistler, H. C., Kuldau, G. A., Kulik, T., Kurzai, O., Laraba, I., Laurence, M. H., Lee, T., Lee, Y., Lee, Y., Leslie, J. F., Liew, E. C. Y., Lofton, L. W., Logrieco, A. F., Lopez-Berges, M. S., Luque, A. G., Lysoe, E., Ma, L., Marra, R. E., Martin, F. N., May, S. R., McCormick, S. P., McGee, C., Meis, J. F., Migheli, Q., Nor, N. M. I. M., Monod, M., Moretti, A., Mostert, D., Mule, G., Munaut, F., Munkvold, G. P., Nicholson, P., Nucci, M., O’Donnell, K., Pasquali, M., Pfenning, L. H., Prigitano, A., Proctor, R. H., Ranque, S., Rehner, S. A., Rep, M., Rodriguez-Alvarado, G., Rose, L. J., Roth, M. G., Ruiz-Roldan, C., Saleh, A. A., Salleh, B., Sang, H., Scandiani, M. M., Scauflaire, J., Schmale, D. G. III., Short, D. P. G., Sisic, A., Smith, J. A., Smyth, C. W., Son, H., Spahr, E., Stajich, J. E., Steenkamp, E., Steinberg, C., Subramaniam, R., Suga, H., Summerell, B. A., Susca, A., Swett, C. L., Toomajian, C., Torres-Cruz, T. J., Tortorano, A. M., Urban, M., Vaillancourt, L. J., Vallad, G. E., Van Der Lee, T. A. J., Vanderpool, D., VanDiepeningen, A. D., Vaughan, M. M., Venter, E., Vermeulen, M., Verweij, P. E., Viljoen, A., Waalwijk, C., Wallace, E. C., Walther, G., Wang, J., Ward, T. J., Wickes, B. L., Wiederhold, N. P., Wingfield, M. J., Wood, A. K. M., Xu, J., Yang, X., Yli-Mattila, T., Yun, S., Zakaria, L., Zhang, H., Zhang, N., Zhang, S. X. and Zhang, X. 2021. Phylogenomic analysis of a 55.1-kb 19-gene dataset resolves a monophyletic Fusarium that includes the Fusarium solani species complex. Phytopathology. 111 (7), pp. 1064-1079. https://doi.org/10.1094/PHYTO-08-20-0330-LE
Diamide insecticide resistance in transgenic Drosophila and Sf9-cells expressing a full-length diamondback moth ryanodine receptor carrying an I4790M mutation
A - Papers appearing in refereed journals
Richardson, E., Homem, R. A., Troczka, B. J., George, C. H., Ebbinghaus-Kintscher, U., Williamson, M. S., Nauen, R. and Davies, T. G. E. 2021. Diamide insecticide resistance in transgenic Drosophila and Sf9-cells expressing a full-length diamondback moth ryanodine receptor carrying an I4790M mutation. Pest Management Science. https://doi.org/10.1002/ps.6730
Chimeric Investigations into the Diamide Binding Site on the Lepidopteran Ryanodine Receptor
A - Papers appearing in refereed journals
Richardson, E., Troczka, B. J., Gutbrod, O., Ebbinghaus-Kintscher, U., Williamson, M. S., George, C.H., Nauen, R. and Davies, T. G. E. 2021. Chimeric Investigations into the Diamide Binding Site on the Lepidopteran Ryanodine Receptor. International Journal Of Molecular Sciences. 22 (23), p. 130333. https://doi.org/10.3390/ijms222313033
Maximizing realized yield by breeding for disease tolerance: A case study for Septoria tritici blotch
A - Papers appearing in refereed journals
Van Den Bosch, F., Smith, J., Wright, P., Milne, A. E., Van Den Berg, F., Kock-Appelgren, P., Foulkes, J. and Paveley, N. 2021. Maximizing realized yield by breeding for disease tolerance: A case study for Septoria tritici blotch. Plant Pathology. https://doi.org/10.1111/ppa.13509
Investigating the origins and evolution of a glyphosate-resistant weed invasion in South America
A - Papers appearing in refereed journals
Gaines, T., Slavov, G., Hughes, D. J., Kupper, A., Sparks, C., Oliva, J., Vila-Aiub, M., Alejandro Garcia, M., Aldo Merotto Jr and Neve, P. 2021. Investigating the origins and evolution of a glyphosate-resistant weed invasion in South America. Molecular Ecology. 30 (21), pp. 5360-5372. https://doi.org/10.1111/mec.16221
Epidemiological studies of pan-azole resistant Aspergillus fumigatus populations sampled during tulip cultivation show clonal expansion with acquisition of multi-fungicide resistance as potential driver
A - Papers appearing in refereed journals
Fraaije, B. A., Atkins, S. L., Santos, R. F., Hanley, S. J., West, J. S. and Lucas, J. 2021. Epidemiological studies of pan-azole resistant Aspergillus fumigatus populations sampled during tulip cultivation show clonal expansion with acquisition of multi-fungicide resistance as potential driver . Microorganisms. 9 (11), p. 2379. https://doi.org/10.3390/microorganisms9112379
Genomic-based epidemiology reveals independent origins and gene flow of glyphosate resistance in Bassia scoparia populations across North America
A - Papers appearing in refereed journals
Ravet, K., Sparks, C. D., Dixon, A. L., Kupper, A., Westra, E. P., Pettinga, D. J., Tranel, P. J., Felix, J., Morishita, D. W., Jha, P., Kniss, A., Stahlman, P. W., Neve, P., Patterson, E. L., Westra, P. and Gaines, T. A. 2021. Genomic-based epidemiology reveals independent origins and gene flow of glyphosate resistance in Bassia scoparia populations across North America. Molecular Ecology. 30 (21), pp. 5343-5359. https://doi.org/10.1111/mec.16215
Next Generation dsRNA-Based Insect Control: Success So Far and Challenges
A - Papers appearing in refereed journals
Nitnavare, R., Bhattacharya, J., Singh, S., Kour, A., Hawkesford, M. J. and Arora, N. 2021. Next Generation dsRNA-Based Insect Control: Success So Far and Challenges. Frontiers in Plant Science. 12 (18 October), p. 673576. https://doi.org/10.3389/fpls.2021.673576
The rise of necrotrophic effectors
A - Papers appearing in refereed journals
Kanyuka, K., Igna, A., Solomon, P. S. and Oliver, R. P. 2021. The rise of necrotrophic effectors. New Phytologist. https://doi.org/10.1111/nph.17811
Identification of Candidate Carboxylesterases Associated With Odorant Degradation in Holotrichia parallela Antennae Based on Transcriptome Analysis
A - Papers appearing in refereed journals
Yi, J., Wang, S., Wang, Z., Wang, X., Gongfeng, L., Zhang, X., Pan, Y., Zhao, S., Zhang, J., Zhou, J-J., Wang, J. and Xi, J. 2021. Identification of Candidate Carboxylesterases Associated With Odorant Degradation in Holotrichia parallela Antennae Based on Transcriptome Analysis. Frontiers in Physiology. 12, p. 674023. https://doi.org/10.3389/fphys.2021.674023