New Phytologist

Journal

TitleNew Phytologist
ISSN0028-646X
PublisherWiley
Notes

Manuscript 12 months

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Developmental constraint underlies the replicated evolution of grass awns

A - Papers appearing in refereed journals
Patterson, E. L., Macgregor, D., Heeney, M., Gallagher, J. P., Nuesslein, B., Cartwright, A. and Bartlett, M. 2025. Developmental constraint underlies the replicated evolution of grass awns. New Phytologist. 245 (2), pp. 835-848. https://doi.org/10.1111/nph.20268

Incorrect recombination partner associations contribute to meiotic instability of neo-allopolyploid Arabidopsis suecica

A - Papers appearing in refereed journals
Cheron, F., Petiot, V., Lambing, C., White, C. and Serra, H. 2023. Incorrect recombination partner associations contribute to meiotic instability of neo-allopolyploid Arabidopsis suecica. New Phytologist. https://doi.org/10.1111/nph.19487

Effector-mediated partial and nonhost disease resistance in wheat

A - Papers appearing in refereed journals
Rudd, J. J. 2023. Effector-mediated partial and nonhost disease resistance in wheat. New Phytologist. 238, pp. 1340-1342. https://doi.org/10.1111/nph.18872

Epigenetic switch reveals CRISPR/Cas9 response to cytosine methylation in plants: Comment

A - Papers appearing in refereed journals
Raffan, S., Kaur, N. and Halford, N. G. 2022. Epigenetic switch reveals CRISPR/Cas9 response to cytosine methylation in plants: Comment. New Phytologist. 235 (6), pp. 2146-2148. https://doi.org/10.1111/nph.18405

Countering elevated CO2 induced Fe and Zn reduction in Arabidopsis seeds

A - Papers appearing in refereed journals
Sun, P., Isner, J., Coupel-Ledru, A., Zhang, Q., Pridgeon, A., He, Y., Menguer, P., Miller, A. J., Sanders, D., McGrath, S. P., Noothong, F., Liang, Y. and Hetherington, A. 2022. Countering elevated CO2 induced Fe and Zn reduction in Arabidopsis seeds. New Phytologist. 235 (5), pp. 1796-1806. https://doi.org/10.1111/nph.18290

The blackgrass genome reveals patterns of non-parallel evolution of polygenic herbicide resistance

A - Papers appearing in refereed journals
Cai, L., Comont, D., Macgregor, D., Lowe, C., Beffa, R., Saski, C. A. and Neve, P. 2022. The blackgrass genome reveals patterns of non-parallel evolution of polygenic herbicide resistance. New Phytologist. https://doi.org/10.1111/nph.18655

The rise of necrotrophic effectors

A - Papers appearing in refereed journals
Kanyuka, K., Igna, A., Solomon, P. S. and Oliver, R. P. 2021. The rise of necrotrophic effectors. New Phytologist. https://doi.org/10.1111/nph.17811

Subcellular dynamics studies of iron reveal how tissue-specific distribution patterns are established in developing wheat grains

A - Papers appearing in refereed journals
Sheraz, S., Wan, Y., Venter, E., Verma, S. K., Xiong, Q., Waites, J., Connorton, J. M, Shewry, P. R., Moore, K. L., and Balk, J 2021. Subcellular dynamics studies of iron reveal how tissue-specific distribution patterns are established in developing wheat grains. New Phytologist. 231 (4), pp. 1644-1657. https://doi.org/10.1111/nph.17440

Combining host plant defence with targeted nutrition: key to durable control of hemiparasitic Striga in cereals in sub-Saharan Africa?

A - Papers appearing in refereed journals
Mwangangi, I. M., Buchi, L., Haefele, S. M., Bastiaans, L., Runo, S. and Rodenburg, J. 2021. Combining host plant defence with targeted nutrition: key to durable control of hemiparasitic Striga in cereals in sub-Saharan Africa? New Phytologist. 230 (6), pp. 2164-2178. https://doi.org/10.1111/nph.17271

Mapping sites of gibberellin biosynthesis in the Arabidopsis root tip

A - Papers appearing in refereed journals
Barker, R., Garcia, M. N. F., Powers, S. J., Vaughan, S., Bennett, M. J., Phillips, A. L., Thomas, S. G. and Hedden, P. 2020. Mapping sites of gibberellin biosynthesis in the Arabidopsis root tip. New Phytologist. https://doi.org/10.1111/NPH.16967

Arguments surrounding the essentiality of boron to vascular plants

A - Papers appearing in refereed journals
McGrath, S. P. 2020. Arguments surrounding the essentiality of boron to vascular plants. New Phytologist. 226 (5), pp. 1225-1227. https://doi.org/10.1111/nph.16575

Molecular mechanisms of adaptive evolution revealed by global selection for glyphosate resistance

A - Papers appearing in refereed journals
Gaines, T. A., Patterson, E. L. and Neve, P. 2019. Molecular mechanisms of adaptive evolution revealed by global selection for glyphosate resistance. New Phytologist. 223 (4), pp. 1770-1775. https://doi.org/10.1111/nph.15858

Sphingolipids: towards an integrated view of metabolism during the plant stress response

A - Papers appearing in refereed journals
Huby, E., Napier, J. A., Baillieul, F., Michaelson, L. V. and Dhondt-Cordelier, S. 2019. Sphingolipids: towards an integrated view of metabolism during the plant stress response. New Phytologist. https://doi.org/10.1111/nph.15997

Evolutionary epidemiology predicts the emergence of glyphosate resistance in a major agricultural weed

A - Papers appearing in refereed journals
Comont, D., Hicks, H., Crook, L., Hull, R. I., Cocciantelli, E., Hadfield, J., Childs, D., Freckleton, R. and Neve, P. 2019. Evolutionary epidemiology predicts the emergence of glyphosate resistance in a major agricultural weed. New Phytologist. https://doi.org/10.1111/nph.15800

Auxin molecular field maps define AUX1 selectivity: many auxin herbicides are not substrates

A - Papers appearing in refereed journals
Hoyerova, K., Hosek, P., Quareshy, M., Li, J., Klima, P., Kubes, M., Yemm, A. A., Neve, P., Tripathi, A., Bennett, M. J. and Napier, R. M. 2018. Auxin molecular field maps define AUX1 selectivity: many auxin herbicides are not substrates. New Phytologist. 217 (4), pp. 1625-1639. https://doi.org/10.1111/nph.14950

Characterization of an antimicrobial and phytotoxic ribonuclease secreted by the fungal wheat pathogen Zymoseptoria tritici

A - Papers appearing in refereed journals
Kettles, G. J., Bayon, C., Sparks, C. A., Canning, G., Kanyuka, K. and Rudd, J. J. 2018. Characterization of an antimicrobial and phytotoxic ribonuclease secreted by the fungal wheat pathogen Zymoseptoria tritici. New Phytologist. 217 (1), pp. 320-331. https://doi.org/10.1111/nph.14786

Plant roots redesign the rhizosphere to alter the three-dimensional physical architecture and water dynamics

A - Papers appearing in refereed journals
Rabbi, S. M. F., Tighe, M. K., Flavel, R. J., Kaiser, B. N., Guppy, C. N., Zhang, X. and Young, I. M. 2018. Plant roots redesign the rhizosphere to alter the three-dimensional physical architecture and water dynamics . New Phytologist. 219 (2), pp. 542-550. https://doi.org/10.1111/nph.15213

N-terminomics reveals control of Arabidopsis seed storage proteins and proteases by the Arg/N-end rule pathway

A - Papers appearing in refereed journals
Zhang, H., Gannon, L., Hassall, K. L., Deery, M. J., Gibbs, D. J., Holdsworth, M. J., Van der Hoorn, R. A. L., Lilley, K. S. and Theodoulou, F. L. 2018. N-terminomics reveals control of Arabidopsis seed storage proteins and proteases by the Arg/N-end rule pathway. New Phytologist. 218 (3), pp. 1106-1126. https://doi.org/10.1111/nph.14909

Suppression of a single BAHD gene in Setaria viridis causes large, stable decreases in cell wall feruloylation and increases biomass digestibility

A - Papers appearing in refereed journals
De Souza, W. R., Martins, P. K., Freeman, J., Pellny, T. K., Michaelson, L. V., Sampaio, B. L., Vinecky, F., Ribeiro, A. P., Da Cunha, B. A. D. B., Kobayashi, A. K., De Oliveira, P. A., Campanha, R. B., Pacheco, T. F., Martarello, D. C. I., Marchiosi, R., Ferrarese-Filho, O., Dos Santos, W. D., Tramontina, R., Squina, F. M., Centeno, D. C., Gaspar, M., Braga, M. R., Tine, M. A. S., Ralph, J., Mitchell, R. A. C. and Molinari, H. B. C. 2018. Suppression of a single BAHD gene in Setaria viridis causes large, stable decreases in cell wall feruloylation and increases biomass digestibility. New Phytologist. 218 (1), pp. 81-93. https://doi.org/10.1111/nph.14970

A new proteinaceous pathogen-associated molecular pattern (PAMP) identified in Ascomycete fungi induces cell death in Solanaceae

A - Papers appearing in refereed journals
Franco-Orozco, B., Berepiki, A., Ruiz, O., Gamble, L., Griffe, L. L., Wang, S., Birch, P. R. J., Kanyuka, K. and Avrova, A. 2017. A new proteinaceous pathogen-associated molecular pattern (PAMP) identified in Ascomycete fungi induces cell death in Solanaceae. New Phytologist. 214 (4), pp. 1657-1672. https://doi.org/10.1111/nph.14542

Apoplastic recognition of multiple candidate effectors from the wheat pathogen Zymoseptoria tritici in the nonhost plant Nicotiana benthamiana

A - Papers appearing in refereed journals
Kettles, G. J., Bayon, C., Canning, G., Rudd, J. J. and Kanyuka, K. 2017. Apoplastic recognition of multiple candidate effectors from the wheat pathogen Zymoseptoria tritici in the nonhost plant Nicotiana benthamiana. New Phytologist. 213 (1), pp. 338-350. https://doi.org/10.1111/nph.14215

Increased soil phosphorus availability induced by faba bean root exudation stimulates root growth and phosphorus uptake in neighbouring maize

A - Papers appearing in refereed journals
Zhang, D. S., Zhang, C. C., Tang, X. Y., Li, H. G., Zhang, F-S., Rengel, Z., Whalley, W. R., Davies, W. J. and Shen, J. B. 2016. Increased soil phosphorus availability induced by faba bean root exudation stimulates root growth and phosphorus uptake in neighbouring maize. New Phytologist. 209 (2), pp. 823-831. https://doi.org/10.1111/nph.13613

Plant volatile-mediated signalling and its application in agriculture: successes and challenges

A - Papers appearing in refereed journals
Pickett, J. A. and Khan, Z. R. 2016. Plant volatile-mediated signalling and its application in agriculture: successes and challenges. New Phytologist. 212 (4), pp. 856-870. https://doi.org/10.1111/nph.14274

Genome size and ploidy influence angiosperm species' biomass under nitrogen and phosphorus limitation

A - Papers appearing in refereed journals
Guignard, M. S., Nichols, R. A., Knell, R. J., Macdonald, A. J., Romila, C-A., Trimmer, M., Leitch, I. J. and Leitch, A. R. 2016. Genome size and ploidy influence angiosperm species' biomass under nitrogen and phosphorus limitation. New Phytologist. 210 (4), pp. 1195-1206. https://doi.org/10.1111/nph.13881

Overexpression of the potassium channel TPKb in small vacuoles confers osmotic and drought tolerance to rice

A - Papers appearing in refereed journals
Ahmad, I., Devonshire, J., Mohamed, R., Schulze, M. and Maathuis, F. J. M. 2016. Overexpression of the potassium channel TPKb in small vacuoles confers osmotic and drought tolerance to rice. New Phytologist. 209 (3), pp. 1040-1048. https://doi.org/10.1111/nph.13708

Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size

A - Papers appearing in refereed journals
Kelly, L. J., Renny-Byfield, S., Pellicer, J., Macas, J., Novak, P., Neumann, P., Lysak, M. A., Day, P. D., Berger, M., Fay, M. F., Nichols, R. A., Leitch, A. R. and Leitch, I. J. 2015. Analysis of the giant genomes of Fritillaria (Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size. New Phytologist. 208 (2), pp. 596-607. https://doi.org/10.1111/nph.13471

Molecular characterization of two isoforms of a farnesyl pyrophosphate synthase gene in wheat and their roles in sesquiterpene synthesis and inducible defence against aphid infestation

A - Papers appearing in refereed journals
Zhang, Y., Li, Z-X., Yu, X-D., Fan, J., Pickett, J. A., Jones, H. D., Zhou, J-J., Birkett, M. A., Caulfield, J., Napier, J. A., Zhao, G-Y., Cheng, X-G., Shi, Y., Bruce, T. J. A. and Xia, L-Q. 2015. Molecular characterization of two isoforms of a farnesyl pyrophosphate synthase gene in wheat and their roles in sesquiterpene synthesis and inducible defence against aphid infestation. New Phytologist. 206 (3), pp. 1101-1115. https://doi.org/10.1111/nph.13302

Functional analysis of a wheat homeodomain protein, TaR1, reveals that host chromatin remodelling influences the dynamics of the switch to necrotrophic growth in the phytopathogenic fungus Zymoseptoria tritici

A - Papers appearing in refereed journals
Lee, J., Orosa, B., Millyard, L., Edwards, M., Kanyuka, K., Gatehouse, A., Rudd, J. J., Hammond-Kosack, K. E., Pain, N. and Sadanandom, A. 2015. Functional analysis of a wheat homeodomain protein, TaR1, reveals that host chromatin remodelling influences the dynamics of the switch to necrotrophic growth in the phytopathogenic fungus Zymoseptoria tritici. New Phytologist. 206 (2), pp. 598-605. https://doi.org/10.1111/nph.13323

Economic and physical determinants of the global distributions of crop pests and pathogens

A - Papers appearing in refereed journals
Bebber, D. P., Holmes, T., Smith, D. and Gurr, S. J. 2014. Economic and physical determinants of the global distributions of crop pests and pathogens. New Phytologist. 202 (3), pp. 901-910. https://doi.org/10.1111/nph.12722

Environmentally driven evolution of Rubisco and improved photosynthesis and growth within the C3 genus Limonium (Plumbaginaceae)

A - Papers appearing in refereed journals
Galmes, J., Andralojc, P. J., Kapralov, M. V., Flexas, J., Keys, A. J., Molins, A., Parry, M. A. J. and Conesa, M. A. 2014. Environmentally driven evolution of Rubisco and improved photosynthesis and growth within the C3 genus Limonium (Plumbaginaceae). New Phytologist. 203 (3), pp. 989-999. https://doi.org/10.1111/nph.12858

DELLA activity is required for successful pollen development in the Columbia ecotype of Arabidopsis

A - Papers appearing in refereed journals
Plackett, A. R. G., Ferguson, A. C., Powers, S. J., Wanchoo-Kohli, A., Phillips, A. L., Wilson, Z. A., Hedden, P. and Thomas, S. G. 2014. DELLA activity is required for successful pollen development in the Columbia ecotype of Arabidopsis. New Phytologist. 201 (3), pp. 825-836. https://doi.org/10.1111/nph.12571

Combined NanoSIMS and synchrotron X-ray fluorescence reveal distinct cellular and subcellular distribution patterns of trace elements in rice tissues

A - Papers appearing in refereed journals
Moore, K. L., Chen, Y., Van De Meene, A. M. L., Hughes, L., Liu, W., Geraki, T., Mosselmans, F., McGrath, S. P., Grovenor, C. and Zhao, F-J. 2014. Combined NanoSIMS and synchrotron X-ray fluorescence reveal distinct cellular and subcellular distribution patterns of trace elements in rice tissues. New Phytologist. 201 (1), pp. 104-115. https://doi.org/10.1111/nph.12497

Characterization of the sterol 14alpha-demethylases of Fusarium graminearum identifies a novel genus-specific CYP51 function

A - Papers appearing in refereed journals
Fan, J., Urban, M., Parker, J. E., Brewer, H. C., Kelly, S. L., Hammond-Kosack, K. E., Fraaije, B. A., Liu, X. and Cools, H. J. 2013. Characterization of the sterol 14alpha-demethylases of Fusarium graminearum identifies a novel genus-specific CYP51 function. New Phytologist. 198 (3), pp. 821-835. https://doi.org/10.1111/nph.12193

Testing the distinctness of shoot ionomes of angiosperm families using the Rothamsted Park Grass Continuous Hay Experiment

A - Papers appearing in refereed journals
White, P. J., Broadley, M. R., Thompson, J. A., Mcnicol, J. W., Crawley, M. J., Poulton, P. R. and Johnston, A. E. 2012. Testing the distinctness of shoot ionomes of angiosperm families using the Rothamsted Park Grass Continuous Hay Experiment. New Phytologist. 196 (1), pp. 101-109. https://doi.org/10.1111/j.1469-8137.2012.04228.x

Heterologous expression of the yeast arsenite efflux system ACR3 improves Arabidopsis thaliana tolerance to arsenic stress

A - Papers appearing in refereed journals
Ali, W., Isner, J-C., Isayenkov, S. V., Liu, W., Zhao, F-J. and Maathuis, F. J. M. 2012. Heterologous expression of the yeast arsenite efflux system ACR3 improves Arabidopsis thaliana tolerance to arsenic stress. New Phytologist. 194 (3), pp. 716-723. https://doi.org/10.1111/j.1469-8137.2012.04092.x

A dual-targeted purple acid phosphatase in Arabidopsis thaliana moderates carbon metabolism and its overexpression leads to faster plant growth and higher seed yield

A - Papers appearing in refereed journals
Sun, F., Suen, P. K., Zhang, Y., Liang, C., Carrie, C., Whelan, J., Ward, J. L., Hawkins, N. D., Jiang, L. and Lim, B. L. 2012. A dual-targeted purple acid phosphatase in Arabidopsis thaliana moderates carbon metabolism and its overexpression leads to faster plant growth and higher seed yield. New Phytologist. 194 (1), pp. 206-219. https://doi.org/10.1111/j.1469-8137.2011.04026.x

Variation in grain arsenic assessed in a diverse panel of rice (Oryza sativa) grown in multiple sites

A - Papers appearing in refereed journals
Norton, G. J., Pinson, S. R. M., Alexander, J., Mckay, S., Hansen, H., Duan, G-L., Islam, M. R., Islam, S., Stroud, J. L., Zhao, F-J., McGrath, S. P., Zhu, Y-G., Lahner, B., Yakubova, E., Guerinot, M. L., Tarpley, L., Eizenga, G. C., Salt, D. E., Meharg, A. A. and Price, A. H. 2012. Variation in grain arsenic assessed in a diverse panel of rice (Oryza sativa) grown in multiple sites. New Phytologist. 193 (3), pp. 650-664. https://doi.org/10.1111/j.1469-8137.2011.03983.x

Methylated arsenic species in plants originate from soil microorganisms

A - Papers appearing in refereed journals
Lomax, C., Liu, W-J., Wu, Liyou, Xue, K., Xiong, J., Zhou, J., McGrath, S. P., Meharg, A. A., Miller, A. J. and Zhao, F-J. 2012. Methylated arsenic species in plants originate from soil microorganisms. New Phytologist. 193 (3), pp. 665-672. https://doi.org/10.1111/j.1469-8137.2011.03956.x

Delivering resistance to a major constraint for rain-fed rice production

A - Papers appearing in refereed journals
Pickett, J. A. and Hooper, A. M. 2011. Delivering resistance to a major constraint for rain-fed rice production. New Phytologist. 192 (4), pp. 792-794. https://doi.org/10.1111/j.1469-8137.2011.03961.x

Evaluation of an electrostatic toxicity model for predicting Ni2+ toxicity to barley root elongation in hydroponic cultures and in soils

A - Papers appearing in refereed journals
Wang, P., Kopittke, P. M., De Schamphelaere, K. A. C., Zhao, F-J., Zhou, D-M., Lock, K., Ma, Y-B., Peijnenburg, W. J. G. M. and McGrath, S. P. 2011. Evaluation of an electrostatic toxicity model for predicting Ni2+ toxicity to barley root elongation in hydroponic cultures and in soils. New Phytologist. 192 (2), pp. 414-427. https://doi.org/10.1111/j.1469-8137.2011.03806.x