The Plant Journal

Journal

TitleThe Plant Journal
Plant Journal
ISSN0960-7412
PublisherWiley-Blackwell
Web address (URL)http://onlinelibrary.wiley.com/journal/10.1111/(ISSN)1365-313X

Outputs

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Epigenetic patterns within the haplotype phased fig (Ficus carica L.) genome

A - Papers appearing in refereed journals
Usai, G., Mascagni, F., Giordani, T., Vangelisti, A., Bose, E., Zuccolo, A., Ceccarelli, M., King, R., Hassani-Pak, K., Zambrano, L. S., Cavallini, A. and Natali, L. 2020. Epigenetic patterns within the haplotype phased fig (Ficus carica L.) genome. The Plant Journal. https://doi.org/10.1111/tpj.14635

The overexpression of rice ACYL-CoA-BINDING PROTEIN2 increases grain size and bran oil content in transgenic rice

A - Papers appearing in refereed journals
Guo, Z.-H., Haslam, R. P., Michaelson, L. V., Young, E. C., Lung, S. C., Napier, J. A. and Chye, M.L. 2019. The overexpression of rice ACYL-CoA-BINDING PROTEIN2 increases grain size and bran oil content in transgenic rice. The Plant Journal. https://doi.org/10.1111/tpj.14503

The Arabidopsis RRM domain protein EDM3 mediates race-specific disease resistance by controlling H3K9me2-dependent alternative polyadenylation of RPP7 immune receptor transcripts.

A - Papers appearing in refereed journals
Lai, Y., Cuzick, A., Lu, X., Wang, J., Katiyar, N., Tsuchiya, T., Le Roch, K., McDowell, J., Holub, E. and Eulgem, T. 2019. The Arabidopsis RRM domain protein EDM3 mediates race-specific disease resistance by controlling H3K9me2-dependent alternative polyadenylation of RPP7 immune receptor transcripts. The Plant Journal. 97 (4), pp. 646-660. https://doi.org/10.1111/tpj.14148

Changes in the proteome of the problem weed blackgrass correlating with multiple-herbicide resistance

A - Papers appearing in refereed journals
Tetard-Jones, C., Sabbadin, F., Moss, S., Hull, R. I., Neve, P. and Edwards, R. 2018. Changes in the proteome of the problem weed blackgrass correlating with multiple-herbicide resistance. The Plant Journal. 94, pp. 709-720. https://doi.org/10.1111/tpj.13892

ICE1 and ZOU determine the depth of primary seed dormancy in Arabidopsis independently of their role in endosperm development

A - Papers appearing in refereed journals
MacGregor, D. R., Zhang, N., Iwasaki, M., Chen, M., Dave, A., Lopez-Molina, L. and Penfield, S. 2018. ICE1 and ZOU determine the depth of primary seed dormancy in Arabidopsis independently of their role in endosperm development. The Plant Journal. 98 (2), pp. 277-290. https://doi.org/10.1111/tpj.14211

Chlamydomonas carries out fatty acid beta-oxidation in ancestral peroxisomes using a bona fide acyl-CoA oxidase

A - Papers appearing in refereed journals
Kong, F. T., Liang, Y. X., Legeret, B., Beyly-Adriano, A., Blangy, S., Haslam, R. P., Napier, J. A., Beisson, F., Peltier, G. and Li-Beisson, Y. 2017. Chlamydomonas carries out fatty acid beta-oxidation in ancestral peroxisomes using a bona fide acyl-CoA oxidase. The Plant Journal. 90 (2), pp. 358-371. https://doi.org/10.1111/tpj.13498

Cyclin-dependent kinase activity enhances phosphatidylcholine biosynthesis in Arabidopsis by repressing phosphatidic acid phosphohydrolase activity

A - Papers appearing in refereed journals
Craddock, C. P., Adams, N., Kroon, J. T. M., Bryant, F. M., Hussey, P. J., Kurup, S. and Eastmond, P. J. 2017. Cyclin-dependent kinase activity enhances phosphatidylcholine biosynthesis in Arabidopsis by repressing phosphatidic acid phosphohydrolase activity. The Plant Journal. 89 (1), pp. 3-14. https://doi.org/10.1111/tpj.13321

The role of ZIP transporters and group F bZIP transcription factors in the Zn-deficiency response of wheat (Triticum aestivum).

A - Papers appearing in refereed journals
Evens, N. P., Buchner, P. H., Williams, L. E. and Hawkesford, M. J. 2017. The role of ZIP transporters and group F bZIP transcription factors in the Zn-deficiency response of wheat (Triticum aestivum). The Plant Journal. 92 (2), pp. 291-304. https://doi.org/10.1111/tpj.13655

Synthetic redesign of plant lipid metabolism

A - Papers appearing in refereed journals
Haslam, R. P., Sayanova, O. V., Kim, H. J., Cahoon, E. B. and Napier, J. A. 2016. Synthetic redesign of plant lipid metabolism. The Plant Journal. 87 (1), pp. 76-86. https://doi.org/10.1111/tpj.13172

Transgenic tobacco plants with improved cyanobacterial Rubisco expression but no extra assembly factors grow at near wild-type rates if provided with elevated CO2

A - Papers appearing in refereed journals
Occhialini, A., Lin, M. T., Andralojc, P. J., Hanson, M. R. and Parry, M. A. J. 2016. Transgenic tobacco plants with improved cyanobacterial Rubisco expression but no extra assembly factors grow at near wild-type rates if provided with elevated CO2. The Plant Journal. 85 (1), pp. 148-160. https://doi.org/10.1111/tpj.13098

Modifying fatty acid profiles through a new cytokinin-based plastid transformation system

A - Papers appearing in refereed journals
Dunne, A., Maple-Grodem, J., Gargano, D., Haslam, R. P., Napier, J. A., Chua, N-H., Russell, R. and Geir Moller, S. 2014. Modifying fatty acid profiles through a new cytokinin-based plastid transformation system. The Plant Journal. 80 (6), pp. 1131-1138. https://doi.org/10.1111/tpj.12684

Beta-carboxysomal proteins assemble into highly organized structures in Nicotiana chloroplasts

A - Papers appearing in refereed journals
Lin, M. T., Occhialini, A., Andralojc, P. J., Devonshire, J., Hines, K. M., Parry, M. A. J. and Hanson, M. R. 2014. Beta-carboxysomal proteins assemble into highly organized structures in Nicotiana chloroplasts. The Plant Journal. 79 (1), pp. 1-12. https://doi.org/10.1111/tpj.12536

Successful high-level accumulation of fish oil omega-3 long-chain polyunsaturated fatty acids in a transgenic oilseed crop

A - Papers appearing in refereed journals
Ruiz-Lopez, N., Haslam, R. P., Napier, J. A. and Sayanova, O. V. 2014. Successful high-level accumulation of fish oil omega-3 long-chain polyunsaturated fatty acids in a transgenic oilseed crop. The Plant Journal. 77 (2), pp. 198-208. https://doi.org/10.1111/tpj.12378

Adaptation to acidic soil is achieved by increased numbers of cis-acting elements regulating ALMT1 expression in Holcus lanatus

A - Papers appearing in refereed journals
Chen, Z. C., Yokosho, K., Kashino, M., Zhao, F-J., Yamaji, N. and Ma, J. F. 2013. Adaptation to acidic soil is achieved by increased numbers of cis-acting elements regulating ALMT1 expression in Holcus lanatus. The Plant Journal. 76 (1), pp. 10-23. https://doi.org/10.1111/tpj.12266

The Arabidopsis cer26 mutant, like the cer2 mutant, is specifically affected in the very long chain fatty acid elongation process

A - Papers appearing in refereed journals
Pascal, S., Bernard, A., Sorel, M., Pervent, M., Vile, D., Haslam, R. P., Napier, J. A., Lessire, R., Domergue, F. and Joubes, J. 2013. The Arabidopsis cer26 mutant, like the cer2 mutant, is specifically affected in the very long chain fatty acid elongation process. The Plant Journal. 73 (5), pp. 733-746. https://doi.org/10.1111/tpj.12060

Parental genome imbalance in Brassica oleracea causes asymmetric triploid block

A - Papers appearing in refereed journals
Stoute, A. I., Varenko, V., King, G. J., Scott, R. J. and Kurup, S. 2012. Parental genome imbalance in Brassica oleracea causes asymmetric triploid block. The Plant Journal. 71 (3), pp. 503-516. https://doi.org/10.1111/j.1365-313X.2012.05015.x

SLO2, a mitochondrial pentatricopeptide repeat protein affecting several RNA editing sites, is required for energy metabolism

A - Papers appearing in refereed journals
Zhu, Q., Dugardeyn, J., Zhang, C., Takenaka, M., Kuhn, K., Craddock, C., Smalle, J., Karampelias, M., Denecke, J., Peters, J., Gerats, T., Brennicke, A., Eastmond, P. J., Meyer, E. H. and Van Der Straeten, D. 2012. SLO2, a mitochondrial pentatricopeptide repeat protein affecting several RNA editing sites, is required for energy metabolism. The Plant Journal. 71 (5), pp. 836-849. https://doi.org/10.1111/j.1365-313X.2012.05036.x

Recruitment of glutathione into the nucleus during cell proliferation adjusts whole-cell redox homeostasis in Arabidopsis thaliana and lowers the oxidative defence shield

A - Papers appearing in refereed journals
Vivancos, P. D., Dong, Y., Ziegler, K., Markovic, J., Pallardo, F. V., Pellny, T. K., Verrier, P. J. and Foyer, C. H. 2010. Recruitment of glutathione into the nucleus during cell proliferation adjusts whole-cell redox homeostasis in Arabidopsis thaliana and lowers the oxidative defence shield. The Plant Journal. 64 (5), pp. 825-838. https://doi.org/10.1111/j.1365-313X.2010.04371.x

Functional analysis of folate polyglutamylation and its essential role in plant metabolism and development

A - Papers appearing in refereed journals
Mehrshahi, P., Gonzalez-Jorge, S., Akhtar, T. A., Ward, J. L., Santoyo-Castelazo, A., Marcus, S. E., Lara-Nunez, A., Ravanel, S., Hawkins, N. D., Beale, M. H., Barrett, D. A., Knox, J. P., Gregory, J. F. Iii, Hanson, A. D., Bennett, M. J. and Dellapenna, D. 2010. Functional analysis of folate polyglutamylation and its essential role in plant metabolism and development. The Plant Journal. 64, pp. 267-279. https://doi.org/10.1111/j.1365-313X.2010.04336.x

The metabolic transition during disease following infection of Arabidopsis thaliana by Pseudomonas syringae pv. tomato

A - Papers appearing in refereed journals
Ward, J. L., Forcat, S., Beckmann, M., Bennett, M., Miller, S. J., Baker, J. M., Hawkins, N. D., Vermeer, C. P., Lu, C., Lin, W., Truman, W. M., Beale, M. H., Draper, J., Mansfield, J. W. and Grant, M. 2010. The metabolic transition during disease following infection of Arabidopsis thaliana by Pseudomonas syringae pv. tomato. The Plant Journal. 63 (3), pp. 443-457. https://doi.org/10.1111/j.1365-313X.2010.04254.x

Signal signature of aboveground-induced resistance upon belowground herbivory in maize

A - Papers appearing in refereed journals
Erb, M., Flors, V., Karlen, D., De Lange, E., Planchamp, C., D'alessandro, M., Turlings, T. C. J. and Ton, J. 2009. Signal signature of aboveground-induced resistance upon belowground herbivory in maize. The Plant Journal. 59 (2), pp. 292-302. https://doi.org/10.1111/j.1365-313X.2009.03868.x

Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation

A - Papers appearing in refereed journals
Ai, P., Sun, S., Zhao, J., Fan, X., Xin, W., Guo, Q., Yu, L., Shen, Q., Wu, P., Miller, A. J. and Xu, G. 2009. Two rice phosphate transporters, OsPht1;2 and OsPht1;6, have different functions and kinetic properties in uptake and translocation. The Plant Journal. 57, pp. 798-809. https://doi.org/10.1111/j.1365-313X.2008.03726.x

The CACTA transposon Bot1 played a major role in Brassica genome divergence and gene proliferation

A - Papers appearing in refereed journals
Alix, K., Joets, J., Ryder, C. D., Moore, J., Barker, G. C., Bailey, J. P., King, G. J. and Heslop-Harrison, J. S. 2008. The CACTA transposon Bot1 played a major role in Brassica genome divergence and gene proliferation. The Plant Journal. 56 (6), pp. 1030-1044. https://doi.org/10.1111/j.1365-313X.2008.03660.x

Degradation of the auxin response factor ARF1

A - Papers appearing in refereed journals
Salmon, J., Ramos, J. and Callis, J. 2008. Degradation of the auxin response factor ARF1. The Plant Journal. 54, pp. 118-128. https://doi.org/10.1111/j.1365-313X.2007.03396.x

Mitochondrial respiratory pathways modulate nitrate sensing and nitrogen-dependent regulation of plant architecture in Nicotiana sylvestris

A - Papers appearing in refereed journals
Pellny, T. K., Van Aken, O., Dutilleul, C., Wolff, T., Groten, K., Bor, M., De Paepe, R., Reyss, A., Van Breusegem, F., Noctor, G. and Foyer, C. H. 2008. Mitochondrial respiratory pathways modulate nitrate sensing and nitrogen-dependent regulation of plant architecture in Nicotiana sylvestris. The Plant Journal. 54 (6), pp. 976-992. https://doi.org/10.1111/j.1365-313X.2008.03472.x

The gibberellin biosynthetic genes AtGA20ox1 and AtGA20ox2 act, partially redundantly, to promote growth and development throughout the Arabidopsis lifecycle

A - Papers appearing in refereed journals
Rieu, I., Ruiz-Rivero, O., Fernandez-Garcia, N., Griffiths, J., Powers, S. J., Gong, F., Linhartova, T., Eriksson, S., Nilsson, O., Thomas, S. G., Phillips, A. L. and Hedden, P. 2008. The gibberellin biosynthetic genes AtGA20ox1 and AtGA20ox2 act, partially redundantly, to promote growth and development throughout the Arabidopsis lifecycle. The Plant Journal. 53 (3), pp. 488-504. https://doi.org/10.1111/j.1365-313X.2007.03356.x

Seed after-ripening is a discrete developmental pathway associated with specific gene networks in Arabidopsis

A - Papers appearing in refereed journals
Carrera, E., Holman, T., Medhurst, A., Dietrich, D., Footitt, S., Theodoulou, F. L. and Holdsworth, M. J. 2007. Seed after-ripening is a discrete developmental pathway associated with specific gene networks in Arabidopsis. The Plant Journal. 53 (2), pp. 214-224. https://doi.org/10.1111/j.1365-313X.2007.03331.x

EDM2 is required for RPP7 -dependent disease resistance in Arabidopsis and affects RPP7 transcript levels

A - Papers appearing in refereed journals
Eulgem, T., Tsuchiya, T., Wang, X-J., Beasley, B., Cuzick, A., Tor, M., Zhu, T., Mcdowell, J. M., Holub, E. and Dangl, J. L. 2007. EDM2 is required for RPP7 -dependent disease resistance in Arabidopsis and affects RPP7 transcript levels. The Plant Journal. 49, pp. 829-839. https://doi.org/10.1111/j.1365-313X.2006.02999.x

Dominant-negative interference with defence signalling by truncation mutations of the tomato Cf-9 disease resistance gene

A - Papers appearing in refereed journals
Barker, C. L., Baillie, B. K., Hammond-Kosack, K. E., Jones, J. D. G. and Jones, D. A. 2006. Dominant-negative interference with defence signalling by truncation mutations of the tomato Cf-9 disease resistance gene. The Plant Journal. 46, pp. 385-399. https://doi.org/10.1111/j.1365-313X.2006.02699.x

Yeast complementation reveals a role for an Arabidopsis thaliana late embryogenesis abundant (LEA)-like protein in oxidative stress tolerance

A - Papers appearing in refereed journals
Mowla, S. B., Cuypers, A., Driscoll, S. P., Kiddle, G., Thomson, J., Foyer, C. H. and Theodoulou, F. L. 2006. Yeast complementation reveals a role for an Arabidopsis thaliana late embryogenesis abundant (LEA)-like protein in oxidative stress tolerance. The Plant Journal. 48 (5), pp. 743-756. https://doi.org/10.1111/j.1365-313X.2006.02911.x

Transactivated and chemically inducible gene expression in plants

A - Papers appearing in refereed journals
Moore, I., Samalova, M. and Kurup, S. 2006. Transactivated and chemically inducible gene expression in plants. The Plant Journal. 45 (4), pp. 651-683. https://doi.org/10.1111/j.1365-313X.2006.02660.x

Antisense reduction of serine hydroxymethyltransferase results in diurnal displacement of NH+4 assimilation in leaves of Solanum tuberosum

A - Papers appearing in refereed journals
Schoerring, J. K., Mack, G., Nielsen, K. H., Husted, S., Suzuki, A., Driscoll, S. P., Boldt, R. and Bauwe, H. 2006. Antisense reduction of serine hydroxymethyltransferase results in diurnal displacement of NH+4 assimilation in leaves of Solanum tuberosum. The Plant Journal. 45 (1), pp. 71-82. https://doi.org/10.1111/j.1365-313X.2005.02598.x

Marking cell lineages in living tissue

A - Papers appearing in refereed journals
Kurup, S., Runions, J., Kohler, U., Laplaze, L., Hodge, S. and Haseloff, J. 2005. Marking cell lineages in living tissue. The Plant Journal. 42 (3), pp. 444-453. https://doi.org/10.1111/j.1365-313X.2005.02386.x

The auxin transport inhibitor response 3 (tir3) allele of BIG and auxin transport inhibitors affect the gibberellin status of Arabidopsis

A - Papers appearing in refereed journals
Desgagne-Penix, I., Eakanunkul, S., Coles, J. P., Phillips, A. L., Hedden, P. and Sponsel, V. 2005. The auxin transport inhibitor response 3 (tir3) allele of BIG and auxin transport inhibitors affect the gibberellin status of Arabidopsis. The Plant Journal. 41 (2), pp. 231-242. https://doi.org/10.1111/j.1365-313X.2004.02287.x

A two-component high-affinity nitrate uptake system in barley

A - Papers appearing in refereed journals
Tong, Y., Zhou, J-J., Li, Z. and Miller, A. J. 2005. A two-component high-affinity nitrate uptake system in barley. The Plant Journal. 41 (3), pp. 442-450. https://doi.org/10.1111/j.1365-313X.2004.02310.x

Two TIR:NB:LRR genes are required to specify resistance to Peronospora parasitica isolate Cala2 in Arabidopsis

A - Papers appearing in refereed journals
Sinapidou, E., Williams, K., Nott, L., Bahkt, S., Tor, M., Crute, I. R., Bittner-Eddy, P. and Beynon, J. 2004. Two TIR:NB:LRR genes are required to specify resistance to Peronospora parasitica isolate Cala2 in Arabidopsis. The Plant Journal. 38, pp. 898-909. https://doi.org/10.1111/j.1365-313X.2004.02099.x

Evidence that SNF1-related kinase and hexokinase are involved in separate sugar-signalling pathways modulating post-translational redox activation of ADP-glucose pyrophosphorylase in potato tubers

A - Papers appearing in refereed journals
Tiessen, A., Prescha, K., Branscheid, A., Palacios, N., Mckibbin, R. S., Halford, N. G. and Geigenbeger, P. 2003. Evidence that SNF1-related kinase and hexokinase are involved in separate sugar-signalling pathways modulating post-translational redox activation of ADP-glucose pyrophosphorylase in potato tubers. The Plant Journal. 35, pp. 490-500.

An abscisic acid-sensitive checkpoint in lateral root development of Arabidopsis

A - Papers appearing in refereed journals
De Smet, I., Signora, L., Beeckman, T., Inze, D., Foyer, C. H. and Zhang, H. 2003. An abscisic acid-sensitive checkpoint in lateral root development of Arabidopsis. The Plant Journal. 33 (3), pp. 543-555. https://doi.org/10.1046/j.1365-313X.2003.01652.x

Mutations in the huge Arabidopsis gene BIG affect a range of hormone and light responses

A - Papers appearing in refereed journals
Kanyuka, K., Praekelt, U., Franklin, K. A., Billingham, O. E., Hooley, R., Whitelam, G. C. and Halliday, K. J. 2003. Mutations in the huge Arabidopsis gene BIG affect a range of hormone and light responses. The Plant Journal. 35 (1), pp. 57-70. https://doi.org/10.1046/j.1365-313X.2003.01779.x

CYP79F1 and CYP79F2 have distinct functions in the biosynthesis of aliphatic glucosinolates in Arabidopsis

A - Papers appearing in refereed journals
Chen, S., Glawischnig, E., Jorgensen, K., Naur, P., Jorgensen, B., Olsen, C-E., Hansen, C. H., Rasmussen, H. B., Pickett, J. A. and Halkier, B. A. 2003. CYP79F1 and CYP79F2 have distinct functions in the biosynthesis of aliphatic glucosinolates in Arabidopsis. The Plant Journal. 33 (5), pp. 923-937. https://doi.org/10.1046/j.1365-313X.2003.01679.x