Designing Future Wheat (DFW) [ISPG]
Repository project
| Project dates | 01 Apr 2017 to end of 31 Mar 2022 |
|---|---|
| Researchers | |
| Principal Investigator | Malcolm Hawkesford |
| Funder | Biotechnology and Biological Sciences Research Council |
| Project number | I0200 |
| Department | Rothamsted Research |
| Research fish code | BB/P016855/1 |
| Grant ID | BB/P016855/1 [Do not use in Researchfish] |
Outputs
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Characterization of an antimicrobial and phytotoxic ribonuclease secreted by the fungal wheat pathogen Zymoseptoria tritici
A - Papers appearing in refereed journals
Kettles, G. J., Bayon, C., Sparks, C. A., Canning, G., Kanyuka, K. and Rudd, J. J. 2018. Characterization of an antimicrobial and phytotoxic ribonuclease secreted by the fungal wheat pathogen Zymoseptoria tritici. New Phytologist. 217 (1), pp. 320-331. https://doi.org/10.1111/nph.14786
The relationships between genotype, yield and environmental factors on protein distribution in the wheat endosperm
F - Theses
Savill, G. P. 2018. The relationships between genotype, yield and environmental factors on protein distribution in the wheat endosperm. F - Theses Rothamsted Research Plant Sciences
Nutrient dynamics in wheat
A - Papers appearing in refereed journals
Hawkesford, M. J., Buchner, P. H. and Riche, A. B. 2018. Nutrient dynamics in wheat. Annual Plant Reviews online. 3 (November), pp. 1-14. https://doi.org/10.1002/9781119312994.apr0663
Sulfur metabolism in Allium cepa is hardly affected by chloride and sulfate salinity
A - Papers appearing in refereed journals
Aghajanzadeh, T. A., Reich, M., Hawkesford, M. J. and Burow, M. 2018. Sulfur metabolism in Allium cepa is hardly affected by chloride and sulfate salinity . Archives of Agronomy and Soil Science. https://doi.org/10.1080/03650340.2018.1540037
CRISPR/Cas precision: do we need to worry about off-targeting in plants?
A - Papers appearing in refereed journals
Hahn, F. and Nekrasov, V. 2018. CRISPR/Cas precision: do we need to worry about off-targeting in plants? Plant Cell Reports. https://doi.org/10.1007/s00299-018-2355-9
RNA Catabolites Contribute to the Nitrogen Pool and Support Growth Recovery of Wheat
A - Papers appearing in refereed journals
Melino, V. J., Casartelli, A., George, J., Rupasinghe, T., Roessner, U., Okamoto, M. and Heuer, S. 2018. RNA Catabolites Contribute to the Nitrogen Pool and Support Growth Recovery of Wheat. Frontiers in Plant Science. 9, p. 1539. https://doi.org/10.3389/fpls.2018.01539
Phosphopantetheinyl transferase (Ppt)-mediated biosynthesis of lysine, but not siderophore or DHN melanin, is required for virulence of Zymoseptoria tritici on wheat
A - Papers appearing in refereed journals
Derbyshire, M. C., Gohari, A. M., Mehrabi, R., Kilaru, S., Steinberg, G., Ali, S., Bailey, A., Hammond-Kosack, K. E., Kema, G. H. J. and Rudd, J. J. 2018. Phosphopantetheinyl transferase (Ppt)-mediated biosynthesis of lysine, but not siderophore or DHN melanin, is required for virulence of Zymoseptoria tritici on wheat. Scientific Reports. 8 (17069). https://doi.org/10.1038/s41598-018-35223-8
Maize yields over Europe may increase in spite of climate change, with an appropriate use of the genetic variability of flowering time
A - Papers appearing in refereed journals
Parent, B., Leclere, M., Lacube, S., Semenov, M. A., Welcker, C., Martre, P. and Tardieu, F. 2018. Maize yields over Europe may increase in spite of climate change, with an appropriate use of the genetic variability of flowering time. Proceedings of the National Academy of Sciences. 115 (42), pp. 10642-10647. https://doi.org/10.1073/pnas.1720716115
Diverging importance of drought stress for maize and winter wheat in Europe
A - Papers appearing in refereed journals
Webber, H, Ewert, F., Olesen, J. E., Müller, C., Fronzek, S., Ruane, A. C., Bourgault, M., Martre, P., Ababaei, B., Bindi, M., Ferrise, R., Finger, R., Fodor, N., Gabaldón-Leal, C., Gaiser, T., Jabloun, M., Kersebaum, K.-C., Lizaso, J. I., Lorie, I. J., Manceau, L., Moriondo, M., Nendel, C., Rodriguez, A., Ruiz-Ramos, M., Semenov, M. A., Siebert, S., Stella, T., Stratonovitch, P., Trombi, G. and Wallach, D. 2018. Diverging importance of drought stress for maize and winter wheat in Europe. Nature Communications. 9 (4249). https://doi.org/10.1038/s41467-018-06525-2
Transcriptional response of rice flag leaves to restricted external phosphorus supply during grain filling in rice cv IR64
A - Papers appearing in refereed journals
Jeong, K., Pantoja, O., Baten, A., Waters, D., Kretzschmar, T., Wissuwa, M., Juila, C. C., Heuer, S. and Rose, T. J. 2018. Transcriptional response of rice flag leaves to restricted external phosphorus supply during grain filling in rice cv IR64. PLOS ONE. 13 (9), p. e0203654. https://doi.org/10.1371/journal.pone.0203654
Sequence diversity and Identification of novel puroindoline and grain softness protein alleles in Elymus, Agropyron and related species
A - Papers appearing in refereed journals
Wilkinson, M. D., King, R. and Grimaldi, R. 2018. Sequence diversity and Identification of novel puroindoline and grain softness protein alleles in Elymus, Agropyron and related species. Diversity. 10 (4), p. 114. https://doi.org/10.3390/d10040114
Gradients in compositions in the starchy endosperm of wheat have implications for milling and processing
A - Papers appearing in refereed journals
Tosi, P., He, J., Lovegrove, A., Gonzalez-Thuillier, I., Penson, S. and Shewry, P. R. 2018. Gradients in compositions in the starchy endosperm of wheat have implications for milling and processing. Trends In Food Science & Technology. 82, pp. 1-7. https://doi.org/10.1016/j.tifs.2018.09.027
Calcium ameliorates the toxicity of sulfate salinity in Brassica rapa
A - Papers appearing in refereed journals
Reich, M., Aghajanzadeh, T. A., Parmar, S., Hawkesford, M. J. and De Kok, L. J. 2018. Calcium ameliorates the toxicity of sulfate salinity in Brassica rapa. Journal of Plant Physiology. 231, pp. 1-8. https://doi.org/10.1016/j.jplph.2018.08.014
Managing Acrylamide at the Agricultural Stage: Variety Selection, Crop Management, and the Prospects for Solving the Acrylamide Problem Through Plant Breeding and Biotechnology
B - Book chapters etc edited externally
Halford, N. G. 2018. Managing Acrylamide at the Agricultural Stage: Variety Selection, Crop Management, and the Prospects for Solving the Acrylamide Problem Through Plant Breeding and Biotechnology. in: Encyclopedia of Food Chemistry, Volume 1 Elsevier. pp. 559–568
Perspective on wheat yield and quality with reduced nitrogen supply
A - Papers appearing in refereed journals
Zorb, C., Ludewig, U. and Hawkesford, M. J. 2018. Perspective on wheat yield and quality with reduced nitrogen supply. Trends in Plant Science. 23 (11), pp. 1029-1037. https://doi.org/10.1016/j.tplants.2018.08.012
The adaptation of Fusarium culmorum to DMI Fungicides Is Mediated by Major Transcriptome Modifications in Response to Azole Fungicide, Including the Overexpression of a PDR Transporter (FcABC1).
A - Papers appearing in refereed journals
Hellin, P., King, R., Urban, M., Hammond-Kosack, K. E. and Legreve, A 2018. The adaptation of Fusarium culmorum to DMI Fungicides Is Mediated by Major Transcriptome Modifications in Response to Azole Fungicide, Including the Overexpression of a PDR Transporter (FcABC1). Frontiers in Microbiology. 9 (1385). https://doi.org/10.3389/fmicb.2018.01385
Hidden variation in polyploid wheat drives local adaptation
A - Papers appearing in refereed journals
Gardiner, L.-J., Joynson, R., Omony, J., Rusholme-Pilcher, R., Olohan, L., Lang, D., Bai, C., Hawkesford, M. J., Salt, D., Spannagl, M., Mayer, K. F. X., Kenny, J., Bevan, M., Hall, N. and Hall, A. 2018. Hidden variation in polyploid wheat drives local adaptation. Genome Research. 28, pp. 1-14. https://doi.org/10.1101/gr.233551.117
Towards FAIRer Biological Knowledge Networks Using a Hybrid Linked Data and Graph Database Approach
A - Papers appearing in refereed journals
Brandizi, M., Singh, A., Rawlings, C. J. and Hassani-Pak, K. 2018. Towards FAIRer Biological Knowledge Networks Using a Hybrid Linked Data and Graph Database Approach. Journal of Integrative Bioinformatics. 15 (3), pp. 1-10. https://doi.org/10.1515/jib-2018-0023
Improved Interpretation of Mercury Intrusion and Soil Water Retention Percolation Characteristics by Inverse Modelling and Void Cluster Analysis
A - Papers appearing in refereed journals
Matthews, G. P., Levy, C. L., Laudone, G. M., Jones, K. L., Ridgway, C. J., Hallin, I. L., Gazze, S. A., Francis, L., Whalley, W. R., Schoelkopf, J. and Gane, P. A. C. 2018. Improved Interpretation of Mercury Intrusion and Soil Water Retention Percolation Characteristics by Inverse Modelling and Void Cluster Analysis. Transport In Porous Media. https://doi.org/10.1007/s11242-018-1087-1
Dissecting Wheat Grain Yield Drivers in a Mapping Population in the UK
A - Papers appearing in refereed journals
Pennacchi, J. P., Carmo-Silva, E., Andralojc, P. J., Feuerhelm, D,, Powers, S. J. and Parry, M. A. J. 2018. Dissecting Wheat Grain Yield Drivers in a Mapping Population in the UK. Agronomy. 8 (6), p. 94. https://doi.org/10.3390/agronomy8060094
UK researchers receive prestigious award for work on wheat genomics
A - Papers appearing in refereed journals
Shewry, P. R. 2018. UK researchers receive prestigious award for work on wheat genomics. Journal of Cereal Science. 81 (May), pp. A1-A2. https://doi.org/10.1016/j.jcs.2018.03.001
Temperature and nitrogen supply interact to determine protein distribution gradients in the wheat grain endosperm
A - Papers appearing in refereed journals
Savill, G. P., Michalski, A., Powers, S. J., Wan, Y., Tosi, P., Buchner, P. H. and Hawkesford, M. J. 2018. Temperature and nitrogen supply interact to determine protein distribution gradients in the wheat grain endosperm. Journal of Experimental Botany. 69 (12), pp. 3117-3126. https://doi.org/10.1093/jxb/ery127
Effects of Organic and Conventional Crop Nutrition on Profiles of Polar Metabolites in Grain of Wheat
A - Papers appearing in refereed journals
Shewry, P. R., Rakszegi, M., Lovegrove, A., Amos, D., Corol, D. I., Tawfike, A., Miko, P. and Ward, J. L. 2018. Effects of Organic and Conventional Crop Nutrition on Profiles of Polar Metabolites in Grain of Wheat. Journal of Agricultural and Food Chemistry - JAFC. 66 (21), pp. 5346-5351. https://doi.org/10.1021/acs.jafc.8b01593
Inter-genome comparison of the Quorn fungus Fusarium venenatum and the closely related plant infecting pathogen Fusarium graminearum
A - Papers appearing in refereed journals
King, R., Brown, N. A., Urban, M. and Hammond-Kosack, K. E. 2018. Inter-genome comparison of the Quorn fungus Fusarium venenatum and the closely related plant infecting pathogen Fusarium graminearum. BMC Genomics. 19, p. 269. https://doi.org/10.1186/s12864-018-4612-2
Plant pathogen effector proteins as manipulators of host microbiomes?
A - Papers appearing in refereed journals
Snelder, N. C., Kettles, G. J., Rudd, J. J. and Thomma, B. P. H. J. 2018. Plant pathogen effector proteins as manipulators of host microbiomes? Molecular Plant Pathology. 19 (2), pp. 257-259. https://doi.org/10.1111/mpp.12628
Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate
A - Papers appearing in refereed journals
Giri, J., Bhosale, R., Huang, G., Pandey, B. K., Parker, H., Zappala, S., Yang, J., Dievart, A., Bureau, C., Ljung, K., Price, A., Rose, T., Larrieu, A., Mairhofer, S., Sturrock, C. J., White, P., Dupuy, L., Hawkesford, M. J., Perin, C., Liang, W., Peret, B., Hodgman, C. T., Lynch, J., Wissuwa, M., Zhang, D., Pridmore, T., Mooney, S. J., Guiderdoni, E., Swarup, R. and Bennett, M. J. 2018. Rice auxin influx carrier OsAUX1 facilitates root hair elongation in response to low external phosphate. Nature Communications. 9, p. 1408. https://doi.org/10.1038/s41467-018-03850-4
The Role of Trehalose 6-Phosphate in Crop Yield and Resilience
A - Papers appearing in refereed journals
Paul, M. J., Gonzalez-Uriarte, A., Griffiths, C. A. and Hassani-Pak, K. 2018. The Role of Trehalose 6-Phosphate in Crop Yield and Resilience. Plant Physiology. 177, pp. 12-23. https://doi.org/10.1104/pp.17.01634
Elite UK winter wheat cultivars differ in their ability to support the colonisation of beneficial root-infecting fungi
A - Papers appearing in refereed journals
Osborne, S., Mcmillan, V. E., White, R. P. and Hammond-Kosack, K. E. 2018. Elite UK winter wheat cultivars differ in their ability to support the colonisation of beneficial root-infecting fungi. Journal of Experimental Botany. 69 (12), pp. 3103-3115. https://doi.org/10.1093/jxb/ery136
Allelic variants of OsSUB1A cause differential expression of transcription factor genes in response to submergence in rice
A - Papers appearing in refereed journals
Sharma, N., Tang, T. M., Singh, N., Ruzicic, S., Mueller-Roeber, B., Baumann, U. and Heuer, S. 2018. Allelic variants of OsSUB1A cause differential expression of transcription factor genes in response to submergence in rice. Rice. 11 (2). https://doi.org/10.1186/s12284-017-0192-z
Where are the drought tolerant crops? An assessment of more than two decades of plant biotechnology effort in crop improvement
A - Papers appearing in refereed journals
Nuccio, M. L., Paul, M. J., Bate, N. J., Cohn, J. and Cutler, S. R. 2018. Where are the drought tolerant crops? An assessment of more than two decades of plant biotechnology effort in crop improvement. Plant Science. 273 (August), pp. 110-119. https://doi.org/10.1016/j.plantsci.2018.01.020
Are GM Crops for Yield and Resilience Possible?
A - Papers appearing in refereed journals
Paul, M. J., Nuccio, M. L. and Basu, S. S. 2018. Are GM Crops for Yield and Resilience Possible? Trends in Plant Science. 23 (1), pp. 10-16. https://doi.org/10.1016/j.tplants.2017.09.007
The effect of microbial activity on soil water diffusivity
A - Papers appearing in refereed journals
Choudhury, B. U., Ferraris, S., Ashton, R. W., Powlson, D. S. and Whalley, W. R. 2018. The effect of microbial activity on soil water diffusivity. European Journal of Soil Science. 69 (3), pp. 407-413. https://doi.org/10.1111/ejss.12535
Sharing mutants and experimental information prepublication using FgMutantDb (https://scabusa.org/FgMutantDb)
A - Papers appearing in refereed journals
Baldwin, T. T., Basenko, E., Harb, O., Brown, N. A., Urban, M., Hammond-Kosack, K. E. and Bregitzer, P. P. 2018. Sharing mutants and experimental information prepublication using FgMutantDb (https://scabusa.org/FgMutantDb). Fungal Genetics and Biology. 115 (June), pp. 90-93. https://doi.org/10.1016/j.fgb.2018.01.002
Excretion of avenanthramides, phenolic acids and their major metabolites following intake of oat bran
A - Papers appearing in refereed journals
Schar, M. Y., Corona, G., Soycan, G., Dine, C., Kristek, A., Alsahrif, S. N. S., Behrends, V., Lovegrove, A., Shewry, P. R. and Spencer, J. P. E. 2018. Excretion of avenanthramides, phenolic acids and their major metabolites following intake of oat bran. Molecular Nutrition & Food Research. 62 (2), p. 1700499. https://doi.org/10.1002/mnfr.201700499
Wheat receptor-kinase-like protein Stb6 controls gene-for-gene resistance to fungal pathogen Zymoseptoria tritici
A - Papers appearing in refereed journals
Saintennac, C., Lee, W. S., Cambon, F., Rudd, J. J., King, R., Marande, W., Powers, S. J., Berges, H., Phillips, A. L., Uauy, C., Hammond-Kosack, K. E., Langin, T. and Kanyuka, K. 2018. Wheat receptor-kinase-like protein Stb6 controls gene-for-gene resistance to fungal pathogen Zymoseptoria tritici. Nature Genetics. 50, pp. 368-374. https://doi.org/10.1038/s41588-018-0051-x
Do ancient types of wheat have health benefits compared with modern bread wheat?
A - Papers appearing in refereed journals
Shewry, P. R. 2018. Do ancient types of wheat have health benefits compared with modern bread wheat? Journal of Cereal Science. 79, pp. 469-476. https://doi.org/10.1016/j.jcs.2017.11.010
Construction of a network describing asparagine metabolism in plants and its application to the identification of genes affecting asparagine metabolism in wheat under drought and nutritional stress
A - Papers appearing in refereed journals
Curtis, T. Y., Bo, V., Tucker A. and Halford, N. G. 2018. Construction of a network describing asparagine metabolism in plants and its application to the identification of genes affecting asparagine metabolism in wheat under drought and nutritional stress. Food and Energy Security. 7 (1), p. e00126. https://doi.org/10.1002/fes3.126
Data set of enzyme fingerprinting of dietary fibre components (arabinoxylan and β-glucan) in old and modern Italian durum wheat genotypes
A - Papers appearing in refereed journals
De Santis, M. A., Kosik, O., Passmore, D., Flagella, Z., Shewry, P. R. and Lovegrove, A. 2018. Data set of enzyme fingerprinting of dietary fibre components (arabinoxylan and β-glucan) in old and modern Italian durum wheat genotypes. Data in Brief. 16 (February), pp. 1062-1068. https://doi.org/10.1016/j.dib.2017.12.029
Modelling daily to seasonal carbon fluxes and annual net ecosystem carbon balance of cereal grain-cropland using DailyDayCent: A model data comparison
A - Papers appearing in refereed journals
Senapati, N., Chabbi, A. and Smith, P. 2018. Modelling daily to seasonal carbon fluxes and annual net ecosystem carbon balance of cereal grain-cropland using DailyDayCent: A model data comparison. Agriculture, Ecosystems & Environment. 252, pp. 159-177. https://doi.org/10.1016/j.agee.2017.10.003
Genomic, biochemical and modelling analyses of asparagine synthetases from wheat
A - Papers appearing in refereed journals
Xu, H., Curtis, T. Y., Powers, S. J., Raffan, S., Gao, R., Huang, J., Heiner, M., Gilbert, D. R. and Halford, N. G. 2018. Genomic, biochemical and modelling analyses of asparagine synthetases from wheat. Frontiers in Plant Science. 8, p. 2237. https://doi.org/10.3389/fpls.2017.02237