DFW - Designing Future Wheat - Work package 2 (WP2) - Added value and resilience
Repository project
| Project dates | 01 Apr 2017 to end of 31 Mar 2022 |
|---|---|
| Researchers | |
| Principal Investigator | Kim Hammond-Kosack |
| Funder | Biotechnology and Biological Sciences Research Council |
| Project number | I0250 |
| Department | Plant Sciences |
| Research fish code | BBS/E/C/000I0250 |
| Grant ID | BBS/E/C/000I0250 |
Outputs
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International collaboration on wheat quality and safety
C2 - Non-edited contributions to conferences
Ikeda, T. M., Juhasz, A., Rogers, J., Shewry, P. R., Lullien-Pellerin, V., Chulze, S., Giraldo, P., Igrjas, G., Ahmed, R., Pena, R. J. and Guzman, C. 2018. International collaboration on wheat quality and safety. 13th International Gluten Workshop. CIMMYT, Mexico 14 Mar 2018
Abstracts of Presentations at ICPP2018: Analysis of Fusarium graminearum pangenome
C1 - Edited contributions to conferences/learned societies
Machado, A., King, R., Urban, M., Del Ponte, E. M., Tessmann, D. J., Kanyuka, K. and Hammond-Kosack, K. E. 2018. Abstracts of Presentations at ICPP2018: Analysis of Fusarium graminearum pangenome. International Congress of Plant Pathology (ICPP) 2018. Boston, USA 29 Jul 2018 American Phytopathological Society (APS). https://doi.org/10.1094/PHYTO-108-10-S1.1
Using virulence mutants to Identify Avr genes in the wheat stem rust fungus, Puccinia graminis f. sp. tritici
C2 - Non-edited contributions to conferences
Upadhyaya, N. M., Ortiz, D., Chen, J., Ellis, J., Li, F., Mago, R., Kanyuka, K., Figueroa, M., Park, R. F. and Dodds, P. 2018. Using virulence mutants to Identify Avr genes in the wheat stem rust fungus, Puccinia graminis f. sp. tritici. International Congress of Plant Pathology (ICPP) 2018. Boston, USA 29 Jul 2018 American Phytopathological Society (APS). https://doi.org/10.1094/PHYTO-108-10-S1.1
Fungal G-protein-coupled receptors: mediators of pathogenesis and targets for disease control
A - Papers appearing in refereed journals
Brown, N. A., Schrevens, S., Van Dijck, P. and Goldman, G. H. 2018. Fungal G-protein-coupled receptors: mediators of pathogenesis and targets for disease control. Nature Microbiology. 3 (4), pp. 402-414. https://doi.org/10.1038/s41564-018-0127-5
Comparison of the dietary fibre composition of old and modern durum wheat (Triticum turgidum spp. durum) genotypes
A - Papers appearing in refereed journals
De Santis, M. A., Kosik, O., Passmore, D., Flagella, Z., Shewry, P. R. and Lovegrove, A. 2018. Comparison of the dietary fibre composition of old and modern durum wheat (Triticum turgidum spp. durum) genotypes. Food Chemistry. 244, pp. 304-310. https://doi.org/10.1016/j.foodchem.2017.09.143
Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species
A - Papers appearing in refereed journals
Kersey, P. J., Allen, J. E., Allot, A., Barba, M., Boddu, S., Bolt, B. J., Carvalho-Silva, D., Christensen, M., Davis, P., Grabmueller, C., Kumar, N., Liu, Z., Maurel, T., Moore, B., Mcdowall, M. D., Maheswari, U., Naamati, G., Newman, V., Ong, C. K., Paulini, M., Pedro, H., Perry, E., Russell, M., Sparrow, H., Tapanari, E., Taylor, K., Vullo, A., Williams, G., Zadissia, A., Olson, A., Stein, J., Wei, S., Tello-Ruiz, M., Ware, D., Luciani, A., Potter, S., Finn, R. D., Urban, M., Hammond-Kosack, K. E., Bolser, D. M., De Silva, N., Howe, K. L., Langridge, N., Maslen, G., Staines, D. M. and Yates, A. 2018. Ensembl Genomes 2018: an integrated omics infrastructure for non-vertebrate species. Nucleic Acids Research. 46 (D1), pp. D802-D808. https://doi.org/10.1093/nar/gkx1011
Characterization of an antimicrobial and phytotoxic ribonuclease secreted by the fungal wheat pathogen Zymoseptoria tritici
A - Papers appearing in refereed journals
Kettles, G. J., Bayon, C., Sparks, C. A., Canning, G., Kanyuka, K. and Rudd, J. J. 2018. Characterization of an antimicrobial and phytotoxic ribonuclease secreted by the fungal wheat pathogen Zymoseptoria tritici. New Phytologist. 217 (1), pp. 320-331. https://doi.org/10.1111/nph.14786
Phosphopantetheinyl transferase (Ppt)-mediated biosynthesis of lysine, but not siderophore or DHN melanin, is required for virulence of Zymoseptoria tritici on wheat
A - Papers appearing in refereed journals
Derbyshire, M. C., Gohari, A. M., Mehrabi, R., Kilaru, S., Steinberg, G., Ali, S., Bailey, A., Hammond-Kosack, K. E., Kema, G. H. J. and Rudd, J. J. 2018. Phosphopantetheinyl transferase (Ppt)-mediated biosynthesis of lysine, but not siderophore or DHN melanin, is required for virulence of Zymoseptoria tritici on wheat. Scientific Reports. 8 (17069). https://doi.org/10.1038/s41598-018-35223-8
Gradients in compositions in the starchy endosperm of wheat have implications for milling and processing
A - Papers appearing in refereed journals
Tosi, P., He, J., Lovegrove, A., Gonzalez-Thuillier, I., Penson, S. and Shewry, P. R. 2018. Gradients in compositions in the starchy endosperm of wheat have implications for milling and processing. Trends In Food Science & Technology. 82, pp. 1-7. https://doi.org/10.1016/j.tifs.2018.09.027
The adaptation of Fusarium culmorum to DMI Fungicides Is Mediated by Major Transcriptome Modifications in Response to Azole Fungicide, Including the Overexpression of a PDR Transporter (FcABC1).
A - Papers appearing in refereed journals
Hellin, P., King, R., Urban, M., Hammond-Kosack, K. E. and Legreve, A 2018. The adaptation of Fusarium culmorum to DMI Fungicides Is Mediated by Major Transcriptome Modifications in Response to Azole Fungicide, Including the Overexpression of a PDR Transporter (FcABC1). Frontiers in Microbiology. 9 (1385). https://doi.org/10.3389/fmicb.2018.01385
Effects of Organic and Conventional Crop Nutrition on Profiles of Polar Metabolites in Grain of Wheat
A - Papers appearing in refereed journals
Shewry, P. R., Rakszegi, M., Lovegrove, A., Amos, D., Corol, D. I., Tawfike, A., Miko, P. and Ward, J. L. 2018. Effects of Organic and Conventional Crop Nutrition on Profiles of Polar Metabolites in Grain of Wheat. Journal of Agricultural and Food Chemistry - JAFC. 66 (21), pp. 5346-5351. https://doi.org/10.1021/acs.jafc.8b01593
Inter-genome comparison of the Quorn fungus Fusarium venenatum and the closely related plant infecting pathogen Fusarium graminearum
A - Papers appearing in refereed journals
King, R., Brown, N. A., Urban, M. and Hammond-Kosack, K. E. 2018. Inter-genome comparison of the Quorn fungus Fusarium venenatum and the closely related plant infecting pathogen Fusarium graminearum. BMC Genomics. 19, p. 269. https://doi.org/10.1186/s12864-018-4612-2
Plant pathogen effector proteins as manipulators of host microbiomes?
A - Papers appearing in refereed journals
Snelder, N. C., Kettles, G. J., Rudd, J. J. and Thomma, B. P. H. J. 2018. Plant pathogen effector proteins as manipulators of host microbiomes? Molecular Plant Pathology. 19 (2), pp. 257-259. https://doi.org/10.1111/mpp.12628
Elite UK winter wheat cultivars differ in their ability to support the colonisation of beneficial root-infecting fungi
A - Papers appearing in refereed journals
Osborne, S., Mcmillan, V. E., White, R. P. and Hammond-Kosack, K. E. 2018. Elite UK winter wheat cultivars differ in their ability to support the colonisation of beneficial root-infecting fungi. Journal of Experimental Botany. 69 (12), pp. 3103-3115. https://doi.org/10.1093/jxb/ery136
Foxtail mosaic virus: a new viral vector for protein expression in cereals
A - Papers appearing in refereed journals
Bouton, C., King, R., Chen, H., Azhakanandam, K., Bieri, S., Hammond-Kosack, K. E. and Kanyuka, K. 2018. Foxtail mosaic virus: a new viral vector for protein expression in cereals. Plant Physiology. 177 (4), pp. 1352-1367. https://doi.org/10.1104/pp.17.01679
Shifting the limits in wheat research and breeding using a fully annotated reference genome
A - Papers appearing in refereed journals
International Wheat Genome Sequencing Consortium (IWGSC), Kanyuka, K. and King, R. 2018. Shifting the limits in wheat research and breeding using a fully annotated reference genome. Science - AAAS. 361 (6403), p. eaar7191. https://doi.org/10.1126/science.aar7191
Excretion of avenanthramides, phenolic acids and their major metabolites following intake of oat bran
A - Papers appearing in refereed journals
Schar, M. Y., Corona, G., Soycan, G., Dine, C., Kristek, A., Alsahrif, S. N. S., Behrends, V., Lovegrove, A., Shewry, P. R. and Spencer, J. P. E. 2018. Excretion of avenanthramides, phenolic acids and their major metabolites following intake of oat bran. Molecular Nutrition & Food Research. 62 (2), p. 1700499. https://doi.org/10.1002/mnfr.201700499
Wheat receptor-kinase-like protein Stb6 controls gene-for-gene resistance to fungal pathogen Zymoseptoria tritici
A - Papers appearing in refereed journals
Saintennac, C., Lee, W. S., Cambon, F., Rudd, J. J., King, R., Marande, W., Powers, S. J., Berges, H., Phillips, A. L., Uauy, C., Hammond-Kosack, K. E., Langin, T. and Kanyuka, K. 2018. Wheat receptor-kinase-like protein Stb6 controls gene-for-gene resistance to fungal pathogen Zymoseptoria tritici. Nature Genetics. 50, pp. 368-374. https://doi.org/10.1038/s41588-018-0051-x
Do ancient types of wheat have health benefits compared with modern bread wheat?
A - Papers appearing in refereed journals
Shewry, P. R. 2018. Do ancient types of wheat have health benefits compared with modern bread wheat? Journal of Cereal Science. 79, pp. 469-476. https://doi.org/10.1016/j.jcs.2017.11.010
Construction of a network describing asparagine metabolism in plants and its application to the identification of genes affecting asparagine metabolism in wheat under drought and nutritional stress
A - Papers appearing in refereed journals
Curtis, T. Y., Bo, V., Tucker A. and Halford, N. G. 2018. Construction of a network describing asparagine metabolism in plants and its application to the identification of genes affecting asparagine metabolism in wheat under drought and nutritional stress. Food and Energy Security. 7 (1), p. e00126. https://doi.org/10.1002/fes3.126
Data set of enzyme fingerprinting of dietary fibre components (arabinoxylan and β-glucan) in old and modern Italian durum wheat genotypes
A - Papers appearing in refereed journals
De Santis, M. A., Kosik, O., Passmore, D., Flagella, Z., Shewry, P. R. and Lovegrove, A. 2018. Data set of enzyme fingerprinting of dietary fibre components (arabinoxylan and β-glucan) in old and modern Italian durum wheat genotypes. Data in Brief. 16 (February), pp. 1062-1068. https://doi.org/10.1016/j.dib.2017.12.029
Phenotypic, comparative genomic and transcriptomic analysis of recently collected European Zymoseptoria tritici strains
C2 - Non-edited contributions to conferences
Chen, H., Bayon, C., King, R., Torriani, S. F. F., Bieri, S., Kanyuka, K., Hammond-Kosack, K. E. and Rudd, J. J. 2017. Phenotypic, comparative genomic and transcriptomic analysis of recently collected European Zymoseptoria tritici strains. Zymoseptoria Meeting, 2017, Kiel, Germany.
Shaping an Optimal Soil by Root–Soil Interaction
A - Papers appearing in refereed journals
Jin, K., White, P. J., Whalley, W. R., Shen, J. and Shi, L. 2017. Shaping an Optimal Soil by Root–Soil Interaction. Trends in Plant Science. 22 (10), pp. 823-829. https://doi.org/10.1016/j.tplants.2017.07.008
RNAi as an emerging approach to control Fusarium Head Blight disease and mycotoxin contamination in cereals
A - Papers appearing in refereed journals
Machado, A., Brown, N. A., Urban, M., Kanyuka, K. and Hammond-Kosack, K. E. 2017. RNAi as an emerging approach to control Fusarium Head Blight disease and mycotoxin contamination in cereals. Pest Management Science. 74 (4), pp. 790-799. https://doi.org/10.1002/ps.4748
A review of wheat diseases – a field perspective
A - Papers appearing in refereed journals
Figueroa, M., Hammond-Kosack, K. E. and Solomon, P. S. 2017. A review of wheat diseases – a field perspective. Molecular Plant Pathology. 19 (6), pp. 1523-1536. https://doi.org/10.1111/mpp.12618
Addition of Aegilops U and M Chromosomes Affects Protein and Dietary Fiber Content of Wholemeal Wheat Flour
A - Papers appearing in refereed journals
Rakszegi, M., Molnár, I., Lovegrove, A., Darkó, E., Farkas,A., Láng, L., Bedő, Z., Doležel, J., Molnár-Láng, M. and Shewry, P. R. 2017. Addition of Aegilops U and M Chromosomes Affects Protein and Dietary Fiber Content of Wholemeal Wheat Flour. Frontiers in Plant Science. 8 (1529). https://doi.org/10.3389/fpls.2017.01529
A conserved fungal glycosyltransferase facilitates pathogenesis of plants by enabling hyphal growth on solid surfaces
A - Papers appearing in refereed journals
King, R., Urban, M., Lauder, R. P., Hawkins, N. J., Evans, M., Plummer, A., Halsey, K., Lovegrove, A., Hammond-Kosack, K. E. and Rudd, J. J. 2017. A conserved fungal glycosyltransferase facilitates pathogenesis of plants by enabling hyphal growth on solid surfaces. PLOS Pathogens. 13 (10), p. e1006672. https://doi.org/10.1371/journal.ppat.1006672
Loss of AvrSr50 by somatic exchange in stem rust leads to virulence for Sr50 resistance in wheat
A - Papers appearing in refereed journals
Chen, J., Upadhyaya, N. M., Ortiz, D., Sperschneider, J., Li, F., Bouton, C., Breen, S., Dong, C., Xu, B., Zhang, X., Mago, R., Newell, K., Xia, X., Bernoux, M., Taylor, J. M., Steffenson, B., Jin, Y., Zhang, P., Kanyuka, K., Figueroa, M., Ellis, J. G., Park, R. F. and Dodds, P. N. 2017. Loss of AvrSr50 by somatic exchange in stem rust leads to virulence for Sr50 resistance in wheat. Science - AAAS. 358 (6370), pp. 1607-1610. https://doi.org/10.1126/science.aao4810