Computational and Analytical Sciences
| Title | Computational and Analytical Sciences |
|---|---|
| Type | Science Department |
| Institute | Rothamsted Research |
| Head | Chris Rawlings |
| Executive Assistant | Sally Murdoch |
Outputs
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Effects of genotype, season and nitrogen nutrition on gene expression and protein accumulation in wheat grain
A - Papers appearing in refereed journals
Chope, G. A., Wan, Y., Penson, S. P., Bhandari, D. G., Powers, S. J., Shewry, P. R. and Hawkesford, M. J. 2014. Effects of genotype, season and nitrogen nutrition on gene expression and protein accumulation in wheat grain. Journal of Agricultural and Food Chemistry - JAFC. 62, pp. 4399-4407. https://doi.org/10.1021/jf500625c
Effect of sulphur fertilisation on the acrylamide-forming potential of wheat (HGCA Project Report No. 525)
D1 - Technical reports: non-confidential
Curtis, T., Halford, N. G., Powers, S. J., McGrath, S. P. and Zazzeroni, R. 2014. Effect of sulphur fertilisation on the acrylamide-forming potential of wheat (HGCA Project Report No. 525). Home Grown Cereals Authority (HGCA) Stoneleigh.
Evidence for the complex relationship between free amino acid and sugar concentrations and acrylamide-forming potential in potato
A - Papers appearing in refereed journals
Muttucumaru, N., Powers, S. J., Elmore, J. S., Briddon, A., Mottram, D. S. and Halford, N. G. 2014. Evidence for the complex relationship between free amino acid and sugar concentrations and acrylamide-forming potential in potato. Annals of Applied Biology - AAB. 164 (2), pp. 286-300. https://doi.org/10.1111/aab.12101
DELLA activity is required for successful pollen development in the Columbia ecotype of Arabidopsis
A - Papers appearing in refereed journals
Plackett, A. R. G., Ferguson, A. C., Powers, S. J., Wanchoo-Kohli, A., Phillips, A. L., Wilson, Z. A., Hedden, P. and Thomas, S. G. 2014. DELLA activity is required for successful pollen development in the Columbia ecotype of Arabidopsis. New Phytologist. 201 (3), pp. 825-836. https://doi.org/10.1111/nph.12571
Photosynthetic assimilation of 14C into amino acids in potato (Solanum tuberosum) and asparagine in the tubers
A - Papers appearing in refereed journals
Muttucumaru, N., Keys, A. J., Parry, M. A. J., Powers, S. J. and Halford, N. G. 2014. Photosynthetic assimilation of 14C into amino acids in potato (Solanum tuberosum) and asparagine in the tubers. Planta. 239, pp. 161-170. https://doi.org/10.1007/s00425-013-1967-0
Effects of variety and nutrient availability on the acrylamide forming potential of rye
C1 - Edited contributions to conferences/learned societies
Postles, J., Elmore, J. S., Powers, S. J., Mottram, D. S. and Halford, N. G. 2013. Effects of variety and nutrient availability on the acrylamide forming potential of rye. Acrylamide, furans and other food-borne contaminants, from plant science to food chemistry. Aspects of Applied Biology 116 . pp. 125-130
Unravelling the mechanisms of trapline foraging in bees
A - Papers appearing in refereed journals
Liboreau, M., Raine, N. E., Reynolds, A. M., Stelzer, R. J., Lim, K. S., Smith, A. D., Osborne, J. L. and Chittka, L. 2013. Unravelling the mechanisms of trapline foraging in bees. Communicative and Integrative Biology. 6, p. e22701. https://doi.org/10.4161/cib.22701
Hydroxamic acids in Aegilops species and effects on Rhopalosiphum padi behaviour and fecundity
A - Papers appearing in refereed journals
Elek, H., Smart, L. E., Martin, J. L., Ahmad, S., Gordon-Weeks, R., Anda, A., Welham, S. J., Werner, P. and Pickett, J. A. 2013. Hydroxamic acids in Aegilops species and effects on Rhopalosiphum padi behaviour and fecundity. Bulletin of Insectology. 66, pp. 213-220.
The ontogeny of bumblebee flight trajectories: from naive explorers to experienced foragers
A - Papers appearing in refereed journals
Osborne, J. L., Smith, A. D., Clark, S. J., Reynolds, D. R., Barron, M. C., Lim, K. S. and Reynolds, A. M. 2013. The ontogeny of bumblebee flight trajectories: from naive explorers to experienced foragers. PLOS ONE. 8 (11), p. e78681. https://doi.org/10.1371/journal.pone.0078681
Effecto de extractos vegetales en crudo en el parasitismo de Pochonia chlamydosporia var. chlamydosporia sobre Meloidogyne incognita
A - Papers appearing in refereed journals
Vilchis-Martinez, K., Manzanilla-Lopez, R. H., Powers, S. J. and Montes-Belmont, R. 2013. Effecto de extractos vegetales en crudo en el parasitismo de Pochonia chlamydosporia var. chlamydosporia sobre Meloidogyne incognita. Nematropica. 43, pp. 254-260.
Effect of root nitrogen supply forms on attraction and repulsion of second-stage juveniles of Meloidogyne graminicola
A - Papers appearing in refereed journals
Patil, J., Powers, S. J., Davies, K. G., Gaur, H. S. and Miller, A. J. 2013. Effect of root nitrogen supply forms on attraction and repulsion of second-stage juveniles of Meloidogyne graminicola. Nematology. 15, pp. 469-482. https://doi.org/10.1163/15685411-00002697
Effect in vitro of tomato root diffusate on Pochonia chlamydosporia growth and Meloidogyne incognita egg parasitism
C2 - Non-edited contributions to conferences
Manzanilla-Lopez, R. H. and Powers, S. J. 2013. Effect in vitro of tomato root diffusate on Pochonia chlamydosporia growth and Meloidogyne incognita egg parasitism. Abstracts ONTA XLV Annual Meeting, La Serena, Chile, 20-25 October 2013 . pp. 64
bZIP67 regulates the omega-3 fatty acid content of Arabidopsis seed oil by activating FATTY ACID DESATURASE3
A - Papers appearing in refereed journals
Mendes, A., Kelly, A. A., Van-Erp, H., Shaw, E., Powers, S. J., Kurup, S. and Eastmond, P. J. 2013. bZIP67 regulates the omega-3 fatty acid content of Arabidopsis seed oil by activating FATTY ACID DESATURASE3. The Plant Cell. 25, pp. 3104-3116. https://doi.org/10.1105/tpc.113.116343
Expression analysis of abscisic acid (ABA) and metabolic signalling factors in developing endosperm and embryo of barley
A - Papers appearing in refereed journals
Chen, Z., Huang, J., Muttucumaru, N., Powers, S. J. and Halford, N. G. 2013. Expression analysis of abscisic acid (ABA) and metabolic signalling factors in developing endosperm and embryo of barley. Journal of Cereal Science. 58, pp. 255-262. https://doi.org/10.1016/j.jcs.2013.06.009
Acrylamide concentrations in potato crisps in Europe from 2002 to 2011
A - Papers appearing in refereed journals
Powers, S. J., Mottram, D. S., Curtis, A. and Halford, N. G. 2013. Acrylamide concentrations in potato crisps in Europe from 2002 to 2011. Food Additives and Contaminants. 30 (9), pp. 1493-1500. https://doi.org/10.1080/19440049.2013.805439
A review of the effects of crop agronomy on the management of Alopecurus myosuroides
A - Papers appearing in refereed journals
Lutman, P. J. W., Moss, S. R., Cook, S. and Welham, S. J. 2013. A review of the effects of crop agronomy on the management of Alopecurus myosuroides. Weed Research. 53 (5), pp. 299-313. https://doi.org/10.1111/wre.12024
Effects of nitrogen and sulfur fertilization on free amino acids, sugars and acrylamide-forming potential in potato
A - Papers appearing in refereed journals
Muttucumaru, N., Powers, S. J., Elmore, J. S., Mottram, D. S. and Halford, N. G. 2013. Effects of nitrogen and sulfur fertilization on free amino acids, sugars and acrylamide-forming potential in potato. Journal of Agricultural and Food Chemistry - JAFC. 61, pp. 6734-6742. https://doi.org/10.1021/jf401570x
The significance of midsummer movements of Autographa gamma: implications for a mechanistic understanding of orientation behavior in a migrant moth
A - Papers appearing in refereed journals
Chapman, J. W., Lim, K. S. and Reynolds, D. R. 2013. The significance of midsummer movements of Autographa gamma: implications for a mechanistic understanding of orientation behavior in a migrant moth. Current Zoology. 59 (3), pp. 360-370. https://doi.org/10.1093/czoolo/59.3.360
Spatial patterns of gluten protein and polymer distribution in wheat grain
A - Papers appearing in refereed journals
He, J., Penson, S., Powers, S. J., Hawes, C., Shewry, P. R. and Tosi, P. 2013. Spatial patterns of gluten protein and polymer distribution in wheat grain. Journal of Agricultural and Food Chemistry - JAFC. 61, pp. 6207-6215. https://doi.org/10.1021/jf401623d
The potential of hydroxamic acids in tetraploid and hexaploid wheat varieties as resistance factors against the bird-cherry oat aphid, Rhopalosiphum padi
A - Papers appearing in refereed journals
Elek, H., Smart, L. E., Martin, J. L., Ahmad, S., Gordon-Weeks, R., Welham, S. J., Nadasy, M., Pickett, J. A. and Werner, C. P. 2013. The potential of hydroxamic acids in tetraploid and hexaploid wheat varieties as resistance factors against the bird-cherry oat aphid, Rhopalosiphum padi. Annals of Applied Biology - AAB. 162 (1), pp. 100-109. https://doi.org/10.1111/aab.12005
The Arabidopsis F-box/Kelch-repeat protein At2g44130 is upregulated in giant cells and promotes nematode susceptibility
A - Papers appearing in refereed journals
Curtis, R. H. C., Pankaj, Powers, S. J., Napier, J. A. and Matthes, M. C. 2013. The Arabidopsis F-box/Kelch-repeat protein At2g44130 is upregulated in giant cells and promotes nematode susceptibility. Molecular Plant-Microbe Interactions - MPMI. 26, pp. 36-43. https://doi.org/10.1094/MPMI-05-12-0135-FI
Priming of production in maize of volatile organic defence compounds by the natural plant activator cis- jasmone
A - Papers appearing in refereed journals
Oluwafemi, S., Dewhirst, S. Y., Veyrat, N., Powers, S. J., Bruce, T. J. A., Caulfield, J. C., Pickett, J. A. and Birkett, M. A. 2013. Priming of production in maize of volatile organic defence compounds by the natural plant activator cis- jasmone. PLOS ONE. 8, p. e62299. https://doi.org/10.1371/journal.pone.0062299
Network-based data integration for selecting candidate virulence associated proteins in the cereal infecting fungus Fusarium graminearum
A - Papers appearing in refereed journals
Lysenko, A., Urban, M., Bennett, L., Tsoka, S., Janowska-Sejda, E., Rawlings, C. J., Hammond-Kosack, K. E. and Saqi, M. 2013. Network-based data integration for selecting candidate virulence associated proteins in the cereal infecting fungus Fusarium graminearum. PLOS ONE. 8, p. e67926. https://doi.org/10.1371/journal.pone.0067926
Using the phenotypic information in the PHI-base database to explore pathogen genomes, transcriptomes and proteomes
C2 - Non-edited contributions to conferences
Urban, M., Antoniw, J. F., Martins, N., Lysenko, A., Grzebyta, J., Janowska-Sedja, E., Saqi, M. and Hammond-Kosack, K. E. 2013. Using the phenotypic information in the PHI-base database to explore pathogen genomes, transcriptomes and proteomes. Abstracts 27th Fungal Genetics Conference, Asilomar, 12-17 March 2013 . pp. 177
How do N2O fluxes determined using five static closed chambers and an auto-sampler compare?
C2 - Non-edited contributions to conferences
Cardenas, L. M., Misselbrook, T. H., Donovan, N., Norris, S., Murray, R. L., Cancer-Berroya, E., Hodgson, C. J. and Chadwick, D. R. 2013. How do N2O fluxes determined using five static closed chambers and an auto-sampler compare? Abstracts Greenhouse Gases and Animal Agriculture (GGAA) Conference, Dublin, 23-26 June 2013 .
Differential defence response due to jasmonate seed treatment in cowpea and tomato against root-knot and potato cyst nematodes
A - Papers appearing in refereed journals
Pankaj, Muttucumaru, N., Powers, S. J., Gaur, H. S., Kurup, S. and Curtis, R. H. C. 2013. Differential defence response due to jasmonate seed treatment in cowpea and tomato against root-knot and potato cyst nematodes. Nematology. 15, pp. 15-21. https://doi.org/10.1163/156854112X641754
Suppression of the SUGAR-DEPENDENT1 triacylglycerol lipase family during seed development enhances oil yield in oilseed rape (Brassica napus L.)
A - Papers appearing in refereed journals
Kelly, A. A., Shaw, E., Powers, S. J., Kurup, S. and Eastmond, P. J. 2013. Suppression of the SUGAR-DEPENDENT1 triacylglycerol lipase family during seed development enhances oil yield in oilseed rape (Brassica napus L.). Plant Biotechnology Journal. 11 (3), pp. 355-361. https://doi.org/10.1111/pbi.12021
Effect of season of application on N2O emissions from urine patches
C2 - Non-edited contributions to conferences
Cardenas, L. M., Donovan, N., Hodgson, C. J., Norris, S., Murray, R., Cancer-Berroya, E., Misselbrook, T. H. and Chadwick, D. R. 2013. Effect of season of application on N2O emissions from urine patches. Abstracts Greenhouse Gases and Animal Agriculture (GGAA) Conference, Dublin, 23-26 June 2013 .
Predicting insect migration density and speed in the daytime convective boundary layer
A - Papers appearing in refereed journals
Bell, J. R., Aralimarad, P., Lim, K. S. and Chapman, J. W. 2013. Predicting insect migration density and speed in the daytime convective boundary layer. PLOS ONE. 8, p. e54202. https://doi.org/10.1371/journal.pone.0054202
Effects of variety and nutrient availability on the acrylamide-forming potential of rye grain
A - Papers appearing in refereed journals
Postles, J., Powers, S. J., Elmore, J. S., Mottram, D. S. and Halford, N. G. 2013. Effects of variety and nutrient availability on the acrylamide-forming potential of rye grain. Journal of Cereal Science. 57, pp. 463-470. https://doi.org/10.1016/j.jcs.2013.02.001
Shared influence of pathogen and host genetics on a trade-off between latent period and spore production capacity in the wheat pathogen, Puccinia triticina
A - Papers appearing in refereed journals
Pariaud, B., Van Den Berg, F., Van Den Bosch, F., Powers, S. J., Kaltz, O. and Lannou, C. 2013. Shared influence of pathogen and host genetics on a trade-off between latent period and spore production capacity in the wheat pathogen, Puccinia triticina. Evolutionary Applications. 6 (2), pp. 303-312. https://doi.org/10.1111/eva.12000
Development of an integrated pest management strategy for control of pollen beetles in winter oilseed rape (HGCA Project Report No 504)
D1 - Technical reports: non-confidential
Cook, S. M., Doring, T. F., Ferguson, A. W., Martin, J. L., Skellern, M. P., Smart, L. E., Watts, N. P., Welham, S. J., Woodcock, C. M., Pickett, J. A., Bardsley, E., Bowman, J., Burns, S., Clarke, M., Davies, J., Gibbard, C., Johnen, A., Jennaway, R., Meredith, R., Murray, D., Nightingale, M., Padbury, N., Patrick, C., Von Richthofen, J-S., Taylor, P., Tait, M. and Werner, P. 2013. Development of an integrated pest management strategy for control of pollen beetles in winter oilseed rape (HGCA Project Report No 504). Kenilworth Home Grown Cereals Authority (HGCA).
Inhibition of SnRK1 by metabolites: tissue-dependent effects and cooperative inhibition by glucose 1-phosphate in combination with trehalose 6-phosphate
A - Papers appearing in refereed journals
Nunes, C., Primavesi, L. F., Patel, M. K., Martinez-Barajas, E., Powers, S. J., Sagar, R., Fevereiro, P. S., Davis, B. G. and Paul, M. J. 2013. Inhibition of SnRK1 by metabolites: tissue-dependent effects and cooperative inhibition by glucose 1-phosphate in combination with trehalose 6-phosphate. Plant Physiology and Biochemistry. 63, pp. 89-98. https://doi.org/10.1016/j.plaphy.2012.11.011
Detection of multi-clustered genes and community structure for the plant pathogenic fungus Fusarium graminearum
B - Book chapters etc edited externally
Bennett, L., Lysenko, A., Papageorgiou, L. G., Urban, M., Hammond-Kosack, K. E., Rawlings, C. J., Saqi, M. and Tsoka, S. 2012. Detection of multi-clustered genes and community structure for the plant pathogenic fungus Fusarium graminearum. in: Gilbert, D. and Heiner, M. (ed.) Computational Methods in Systems Biology Springer-Verlag Berlin Heidelberg.
Inoculum levels of Meloidogyne hispanica and M. javanica affect nematode reproduction and growth of tomato genotypes
A - Papers appearing in refereed journals
Maleita, C. M. N., Curtis, R. H. C., Powers, S. J. and Abrantes, I. M. De O. 2012. Inoculum levels of Meloidogyne hispanica and M. javanica affect nematode reproduction and growth of tomato genotypes. Phytopathologia mediterranea. 51, pp. 566-576. https://doi.org/10.14601/Phytopathol_Mediterr-9740
Effect of small lipophilic molecules in tomato and rice root exudates on the behaviour of Meloidogyne incognita and M. graminicola
A - Papers appearing in refereed journals
Dutta, T. K., Powers, S. J., Gaur, H. S., Birkett, M. A. and Curtis, R. H. C. 2012. Effect of small lipophilic molecules in tomato and rice root exudates on the behaviour of Meloidogyne incognita and M. graminicola. Nematology. 14, pp. 309-320. https://doi.org/10.1163/156854111X612306
Host status of cultivated plants to Meloidogyne hispanica
A - Papers appearing in refereed journals
Maleita, C. M. N., Curtis, R. H. C., Powers, S. J. and Abrantes, I. M. De O. 2012. Host status of cultivated plants to Meloidogyne hispanica. European Journal of Plant Pathology. 133, pp. 449-460. https://doi.org/10.1007/s10658-011-9918-8
Radar tracking and motion-sensitive cameras on flowers reveal the development of pollinator multi-destination routes over large spatial scales
A - Papers appearing in refereed journals
Lihoreau, M., Raine, N. E., Reynolds, A. M., Stelzer, R. J., Lim, K. S., Smith, A. D., Osborne, J. L. and Chittka, L. 2012. Radar tracking and motion-sensitive cameras on flowers reveal the development of pollinator multi-destination routes over large spatial scales. PLOS Biology. 10, p. e1001392. https://doi.org/10.1371/journal.pbio.1001392
A hypomethylated population of Brassica rapa for forward and reverse epi-genetics
A - Papers appearing in refereed journals
Amoah, S., Kurup, S., Rodriguez Lopez, C. M., Welham, S. J., Powers, S. J., Hopkins, C. J., Wilkinson, M. J. and King, G. J. 2012. A hypomethylated population of Brassica rapa for forward and reverse epi-genetics. BMC Plant Biology. 12, p. 193 (17pp). https://doi.org/10.1186/1471-2229-12-193
Statistics in nematology
B - Book chapters etc edited externally
Powers, S. J. 2012. Statistics in nematology. in: Manzanilla-Lopez, R. H. and Marban-Mendoza, N. (ed.) Practical plant nematology Biblioteca Basica de Agricultura, Texcoco. pp. 841-870