PS: Crop Productivity and Quality

TitlePS: Crop Productivity and Quality
TypeResearch cluster

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Characterization of the wheat leaf metabolome during grain filling and under varied N-supply

A - Papers appearing in refereed journals
Heyneke, E., Watanabe, M., Erban, A, Duan, G, Buchner, P. H., Walther, D., Kopka, J, Hawkesford, M. J. and Hoefgen, R. 2017. Characterization of the wheat leaf metabolome during grain filling and under varied N-supply. Frontiers in Plant Science. 8 (2048), pp. 1-18. https://doi.org/10.3389/fpls.2017.02048

Multi-feature machine learning model for automatic segmentation of green fractional vegetation cover for high-throughput field phenotyping

A - Papers appearing in refereed journals
Sadeghi-Tehran, P., Virlet, N., Sabermanesh, K. and Hawkesford, M. J. 2017. Multi-feature machine learning model for automatic segmentation of green fractional vegetation cover for high-throughput field phenotyping. Plant Methods. 13 (103), pp. 1-16. https://doi.org/10.1186/s13007-017-0253-8

Improving the uptake and assimilation of nitrogen in wheat plants

B - Book chapters etc edited externally
Le Gouis, J. and Hawkesford, M. J. 2016. Improving the uptake and assimilation of nitrogen in wheat plants. in: Langridge, P. (ed.) Achieving sustainable cultivation of wheat. Volume 1: Breeding, quality traits, pests and diseases. Burleigh Dodds.

Similar estimates of temperature impacts on global wheat yield by three independent methods

A - Papers appearing in refereed journals
Liu, B., Asseng, S., Müller, C., Ewert, F., Elliott, J., Lobell, D. B., Martre, P., Ruane, A. C., Wallach, D., Jones, J. W., Rosenzweig, C., Aggarwal, P. K., Alderman, P. D., Anothai, J., Basso, B., Biernath, C., Cammarano, D., Challinor, A. J., Deryng, D., De Sanctis, G., Doltra, J., Fereres, E., Folberth, C., Garcia-Vila, M., Gayler, S., Hoogenboom, G., Hunt, L. A., Izaurralde, R. C., Jabloun, M., Jones, C. D., Kersebaum, K. C., Kimball, B. A., Koehler, A. K., Kumar, S. N., Nendel, C., O'Leary, G. J., Olesen, J. E., Ottman, M. J., Palosuo, T., Prasad, P. V. V., Priesack, E., Pugh, T. A. M., Reynolds, M., Rezaei, E. E., Rötter, R. P., Schmid, E., Semenov, M. A., Shcherbak, I., Stehfest, E., Stöckle, C. O., Stratonovitch, P., Streck, T., Supit, I., Tao, F., Thorburn, P., Waha, K., Wall, G. W., Wang, E., White, J. W., Wolf, J., Zhao, Z. and Zhu, Y. 2016. Similar estimates of temperature impacts on global wheat yield by three independent methods. Nature Climate Change. 6 (12), pp. 1130-1138. https://doi.org/10.1038/nclimate3115

Uncertainty of wheat water use: Simulated patterns and sensitivity to temperature and CO2

A - Papers appearing in refereed journals
Cammarano, D., Rötter, R. P., Asseng, S., Ewert, F., Wallach, D., Martre, P., Hatfield, J. L., Jones, J. W., Rosenzweig, C., Ruane, A. C., Boote, K. J., Thorburn, P. J., Kersebaum, K. C., Aggarwal, P. K., Angulo, C., Basso, B., Bertuzzi, P., Biernath, C., Brisson, N., Challinor, A. J., Doltra, J., Gayler, S., Goldberg, R., Heng, L., Hooker, J., Hunt, L. A., Ingwersen, J., Izaurralde, R. C., Müller, C., Kumar, S. N., Nendel, C., O'Leary, G. J., Olesen, J. E., Osborne, T. M., Palosuo, T., Priesack, E., Ripoche, D., Semenov, M. A., Shcherbak, I., Steduto, P., Stöckle, C. O., Stratonovitch, P., Streck, T., Supit, I., Tao, F., Travasso, M., Waha, K., White, J. W. and Wolf, J. 2016. Uncertainty of wheat water use: Simulated patterns and sensitivity to temperature and CO2. Field Crops Research. 198, pp. 80-92. https://doi.org/10.1016/j.fcr.2016.08.015

Characterising Unintended Effects of Genetic Modification on Expression of Gluten Proteins Involved in IgE-Mediated Allergies and Coeliac Disease Using Proteomics

C1 - Edited contributions to conferences/learned societies
Bromilow, S. N. L., Gethings, L., Shewry, P. R., Bromley, M., Buckley, M. and Mills, E. N. C. 2016. Characterising Unintended Effects of Genetic Modification on Expression of Gluten Proteins Involved in IgE-Mediated Allergies and Coeliac Disease Using Proteomics. Programs and Abstracts of Papers to be Presented During Scientific Sessions: 2016 AAAAI Annual Meeting . Elsevier. https://doi.org/10.1016/j.jaci.2015.12.1005

Climate forcing of an emerging pathogenic fungus across a montane multi-host community

A - Papers appearing in refereed journals
Clare, F. C., Halder, J. B., Daniel, O., Bielby, J., Semenov, M. A., Jombart, T., Loyau, A., Schmeller, D. S., Cunningham, A. A., Rowcliffe, M., Garner, T. W. J., Bosch, J. and Fisher, M. C. 2016. Climate forcing of an emerging pathogenic fungus across a montane multi-host community. Philosophical Transactions of the Royal Society B-Biological Sciences. 371 (1709). https://doi.org/10.1098/rstb.2015.0454

High throughput field phenotyping of wheat plant height and growth rate in field plot trials using UAV based remote sensing

A - Papers appearing in refereed journals
Holman, F. H., Riche, A. B., Michalski, A., Castle, M., Wooster, M. J. and Hawkesford, M. J. 2016. High throughput field phenotyping of wheat plant height and growth rate in field plot trials using UAV based remote sensing. Remote Sensing. 8 (12), p. 1031. https://doi.org/10.3390/rs8121031

Foreword: Biotechnology of major cereals

B - Book chapters etc edited externally
Shewry, P. R. 2016. Foreword: Biotechnology of major cereals. in: Jones, H. D. (ed.) Biotechnology of major cereals Wallingford, Oxon CAB International (CABI). pp. ix

Cultivation and impact of wheat

B - Book chapters etc edited externally
Shewry, P. R. 2016. Cultivation and impact of wheat. in: In Oxford research encyclopedia, environmental science Oxford University Press (OUP) Oxford.

Editorial: Journal of Cereal Science

A - Papers appearing in refereed journals
Shewry, P. R. 2016. Editorial: Journal of Cereal Science. Journal of Cereal Science. 70, pp. A1-A1. https://doi.org/10.1016/j.jcs.2016.07.012

Genome-wide analysis of autophagy-associated genes in foxtail millet (Setaria italica L.) and characterization of the function of SiATG8a in conferring tolerance to nitrogen starvation in rice

A - Papers appearing in refereed journals
Li, W. W., Chen, M., Wang, E. H., Hu, L. Q., Hawkesford, M. J., Zhong, L., Chen, Z., Xu, Z. S., Li, L. C., Zhou, Y. B., Guo, C. H. and Ma, Y. Z. 2016. Genome-wide analysis of autophagy-associated genes in foxtail millet (Setaria italica L.) and characterization of the function of SiATG8a in conferring tolerance to nitrogen starvation in rice. BMC Genomics. 17 (797), pp. 1-16. https://doi.org/10.1186/s12864-016-3113-4

Field Scanalyzer: An automated robotic field phenotyping platform for detailed crop monitoring

A - Papers appearing in refereed journals
Virlet, N., Sabermanesh, K., Sadeghi-Tehran, P. and Hawkesford, M. J. 2016. Field Scanalyzer: An automated robotic field phenotyping platform for detailed crop monitoring. Functional Plant Biology. 44 (1), pp. 143-153. https://doi.org/10.1071/FP16163

Is modern wheat bad for health?

A - Papers appearing in refereed journals
Shewry, P. R., Pellny, T. K. and Lovegrove, A. 2016. Is modern wheat bad for health? Nature Plants. 2, pp. 1-3. https://doi.org/10.1038/NPLANTS.2016.97

Improving the health benefits of wheat

B - Book chapters etc edited externally
Shewry, P. R. 2016. Improving the health benefits of wheat. in: Bonjean, A. P., Angus, W. J. and Van Ginkel, M. (ed.) World Wheat Book volume 3: A history of wheat breeding Lavoisier, Paris. pp. 1279-1296

Multi-wheat-model ensemble responses to interannual climate variability

A - Papers appearing in refereed journals
Ruane, A. C., Hudson, N. L., Asseng, S., Ewert, F., Cammarano, D., Martre, P., Boote, K. J., Thorburn, P. J., Aggarwal, P. K., Angulo, C., Basso, B., Bertuzzi, P., Biernath, C., Brisson, N., Challinor, A. J., Doltra, J., Gayler, S., Goldberg, R., Grant, R. F., Heng, L., Hooker, J., Hunt, L. A., Ingwersen, J., Izaurralde, R. C., Kersebaum, K. C., Müller, C., Kumar, S. N., Nendel, C., O'Leary, G., Olesen, J. E., Osborne, T. M., Palosuo, T., Priesack, E., Ripoche, D., Semenov, M. A., Shcherbak, I., Steduto, P., Stöckle, C. O., Stratonovitch, P., Streck, T., Supit, I., Tao, F. L., Travasso, M., Waha, K., Wallach, D., White, J. W. and Wolf, J. 2016. Multi-wheat-model ensemble responses to interannual climate variability. Environmental Modelling and Software. 81, pp. 86-101. https://doi.org/10.1016/j.envsoft.2016.03.008

Interactions of sulfate with other nutrients as revealed by H2S fumigation of Chinese cabbage

A - Papers appearing in refereed journals
Reich, M., Shahbaz, M., Prajapati, D. H., Parmar, S., Hawkesford, M. J. and De Kok, L. J. 2016. Interactions of sulfate with other nutrients as revealed by H2S fumigation of Chinese cabbage. Frontiers in Plant Science. 7, p. 541. https://doi.org/10.3389/fpls.2016.00541

Deep roots and soil structure

A - Papers appearing in refereed journals
Gao, W., Hodgkinson, L., Jin, K., Watts, C. W., Ashton, R. W., Shen, J., Ren, T., Dodd, I. C., Binley, A., Phillips, A. L., Hedden, P., Hawkesford, M. J. and Whalley, W. R. 2016. Deep roots and soil structure. Plant, Cell and Environment. 39 (8), pp. 1662-1668. https://doi.org/10.1111/pce.12684

Leaf photosynthesis and associations with grain yield, biomass and nitrogen-use efficiency in landraces, synthetic-derived lines and cultivars in wheat

A - Papers appearing in refereed journals
Gaju, O., DeSilva, J., Carvalho, P., Hawkesford, M. J., Griffiths, S., Greenland, A. and Foulkes, M. J. 2016. Leaf photosynthesis and associations with grain yield, biomass and nitrogen-use efficiency in landraces, synthetic-derived lines and cultivars in wheat. Field Crops Research. 193, pp. 1-15. https://doi.org/10.1016/j.fcr.2016.04.018

Improving wheat to remove coeliac epitopes but retain functionality

A - Papers appearing in refereed journals
Shewry, P. R. and Tatham, A. S. 2016. Improving wheat to remove coeliac epitopes but retain functionality. Journal of Cereal Science. 67, pp. 12-21. https://doi.org/10.1016/j.jcs.2015.06.005

Do we need to worry about eating wheat?

A - Papers appearing in refereed journals
Shewry, P. R. and Hey, S. J. 2016. Do we need to worry about eating wheat? Nutrition Bulletin. 41 (1), pp. 6-13. https://doi.org/10.1111/nbu.12186

The protein chemistry of dicotyledenonous grains

B - Book chapters etc edited externally
Shewry, P. R. 2016. The protein chemistry of dicotyledenonous grains. in: Wrigley, C., Faubion, J., Seetharaman, K. and Corke, H. (ed.) Encyclopedia of food grains, 2nd ed Academic Press, Oxford.

Protein synthesis and deposition

B - Book chapters etc edited externally
Shewry, P. R. and Tosi, P. 2016. Protein synthesis and deposition. in: Wrigley, C., Faubion, J., Seetharaman, K. and Corke, H. (ed.) Encyclopedia of food grains, 2nd ed Academic Press, Oxford.

Using NMR-based metabolomics to evaluate postprandial urinary responses following consumption of minimally processed wheat bran or wheat aleurone by men and women

A - Papers appearing in refereed journals
Garg, R., Brennan, L., Price, R. K., Wallace, J. M. W., Strain, J. J., Gibney, M. J., Shewry, P. R., Ward, J. L., Garg, L. and Welch, R. W. 2016. Using NMR-based metabolomics to evaluate postprandial urinary responses following consumption of minimally processed wheat bran or wheat aleurone by men and women. Nutrients. 8 (2), p. 96. https://doi.org/10.3390/nu8020096

Extractability and characteristics of proteins deriving from wheat DDGS

A - Papers appearing in refereed journals
Chatzifragkou, A., Prabhakumari, P. C., Kosik, O., Lovegrove, A., Shewry, P. R. and Charalampopoulos, D. 2016. Extractability and characteristics of proteins deriving from wheat DDGS. Food Chemistry. 198 (1 May), pp. 12-19. https://doi.org/10.1016/j.foodchem.2015.11.036

The dynamics of protein body formation in developing wheat grain

A - Papers appearing in refereed journals
Moore, K. L., Tosi, P., Palmer, R., Hawkesford, M. J., Grovenor, C. R. M. and Shewry, P. R. 2016. The dynamics of protein body formation in developing wheat grain. Plant Biotechnology Journal. 14 (9), pp. 1876-1882. https://doi.org/10.1111/pbi.12549

Atmospheric H2S and SO2 as sulfur sources for Brassica juncea and Brassica rapa: regulation of sulfur uptake and assimilation

A - Papers appearing in refereed journals
Aghajanzadeh, T. A., Hawkesford, M. J. and De Kok, L. J. 2016. Atmospheric H2S and SO2 as sulfur sources for Brassica juncea and Brassica rapa: regulation of sulfur uptake and assimilation. Environmental and Experimental Botany. 124, pp. 1-10. https://doi.org/10.1016/j.envexpbot.2015.12.001

Planting seeds for the future of food

A - Papers appearing in refereed journals
Green, H., Broun, P., Cakmak, I., Condon, L., Federoff, N., Gonzalez-Valero, J., Graham, I., Lewis, J., Moloney, M., Oniang'o, R. K., Sanginga, N., Shewry, P. R. and Roulin, A. 2016. Planting seeds for the future of food. Journal of the Science of Food and Agriculture. 96 (8), pp. 1409-1414. https://doi.org/10.1002/jsfa.7734

Temperature determines size and direction of effects of elevated CO2 and nitrogen form on yield quantity and quality of Chinese cabbage

A - Papers appearing in refereed journals
Reich, M., Van Den Meerakker, A. N., Parmar, S., Hawkesford, M. J. and De Kok, L. J. 2016. Temperature determines size and direction of effects of elevated CO2 and nitrogen form on yield quantity and quality of Chinese cabbage. Plant Biology. 18(Supplement 1), pp. 63-75. https://doi.org/10.1111/plb.12396

1H-NMR screening for the high-throughput determination of genotype and environmental effects on the content of asparagine in wheat grain

A - Papers appearing in refereed journals
Corol, D. I., Ravel, C., Rakszegi, M., Charmet, G., Bedo, Z., Beale, M. H., Shewry, P. R. and Ward, J. L. 2016. 1H-NMR screening for the high-throughput determination of genotype and environmental effects on the content of asparagine in wheat grain. Plant Biotechnology Journal. 14 (1), pp. 128-139. https://doi.org/10.1111/pbi.12364

Effect of suppression of arabinoxylan synthetic genes in wheat endosperm on chain length of arabinoxylan and extract viscosity

A - Papers appearing in refereed journals
Freeman, J., Lovegrove, A., Wilkinson, M. D., Saulnier, L., Shewry, P. R. and Mitchell, R. A. C. 2016. Effect of suppression of arabinoxylan synthetic genes in wheat endosperm on chain length of arabinoxylan and extract viscosity. Plant Biotechnology Journal. 14 (1), pp. 109-116. https://doi.org/10.1111/pbi.12361

Influence of temperature during grain filling on gluten viscoelastic properties and gluten protein composition

A - Papers appearing in refereed journals
Koga, S., Bocker, U., Moldestad, A., Tosi, P., Shewry, P. R., Mosleth, E. F. and Uhlen, A. K. 2016. Influence of temperature during grain filling on gluten viscoelastic properties and gluten protein composition. Journal of the Science of Food and Agriculture. 96 (1), pp. 122-130. https://doi.org/10.1002/jsfa.7068

Molecular physiology and ecophysiology of sulfur

E - Books edited/written by staff member, alone/with others
De Kok, L. J., Hawkesford, M. J., Rennenberg, H., Saito, K. and Schnug, E. (ed.) 2015. Molecular physiology and ecophysiology of sulfur. Springer, Switzerland.

Modelling climate change impacts on crop production for food security: introduction

A - Papers appearing in refereed journals
Bindi, M., Palosuo, T., Trnka, M. and Semenov, M. A. 2015. Modelling climate change impacts on crop production for food security: introduction. Climate Research. 65, pp. 3-5. https://doi.org/10.3354/cr01342

Temperature and precipitation effects on wheat yield across a European transect: a crop model ensemble analysis using impact response surfaces

A - Papers appearing in refereed journals
Pirttioja, N., Semenov, M. A. and Stratonovitch, P. 2015. Temperature and precipitation effects on wheat yield across a European transect: a crop model ensemble analysis using impact response surfaces. Climate Research. 65, pp. 87-105. https://doi.org/10.3354/cr01322

In silico system analysis of physiological traits determining grain yield and protein concentration for wheat as influenced by climate and crop management

A - Papers appearing in refereed journals
Martre, P., He, J., Le Gouis, J. and Semenov, M. A. 2015. In silico system analysis of physiological traits determining grain yield and protein concentration for wheat as influenced by climate and crop management. Journal of Experimental Botany. 66, pp. 3581-3598. https://doi.org/10.1093/jxb/erv049

Statistical analysis of large simulated yield datasets for studying climate effects

B - Book chapters etc edited externally
Makowski, D., Asseng, S., Ewert, F., Bassu, S., Durand, J., Martre, P., Adam, M., Aggarwal, P. K., Angulo, C., Baron, C., Basso, B., Bertuzzi, P., Biernath, C., Boogard, H., Boote, K. J., Brisson, N., Cammarano, D., Challinor, A. J., Conijn, S., Corbeels, M., Deryng, D., De Sanctis, G., Doltra, J., Gayler, S., Goldberg, R., Grassini, P., Hatfield, J. L., Heng, L., Hoek, S., Hooker, J., Hunt, T., Ingwersen, J., Izaurralde, R. C., Jongschaap, R., Jones, J., Kersebaum, K. C., Kim, S., Lizaso, J., Müller, C., Kumar, N., Nendel, C., O'Leary, G., Olsen, J., Osborne, T., Palosuo, T., Pravia, M., Priesack, E., Semenov, M. A. and Stratonovitch, P. 2015. Statistical analysis of large simulated yield datasets for studying climate effects. in: Hillel, D. and Rosenzweig, C. (ed.) Handbook of climate change and agroecosystems: the Agricultural Model Intercomparison and Improvement Project (AgMIP) Imperial College Press, London. pp. 279-295

Crop modelling for integrated assessment of risk to food production from climate change

A - Papers appearing in refereed journals
Ewert, F., Rotter, R. P., Bindi, M., Webber, H., Trnka, M., Kersebaum, K. C., Olesen, J. E., Van Ittersum, M. K., Janssen, S., Rivington, M., Semenov, M. A., Wallach, D., Porter, J. R., Stewart, D., Verhagen, J., Gaiser, T., Palosuo, T., Tao, F., Nendel, C., Roggero, P. P., Bartosova, L. and Asseng, S. 2015. Crop modelling for integrated assessment of risk to food production from climate change. Environmental Modelling and Software. 72, pp. 287-303. https://doi.org/10.1016/j.envsoft.2014.12.003

Hazelnut allergy across Europe dissected molecularly: a EuroPrevall outpatient clinic survey

A - Papers appearing in refereed journals
Datema, M. R., Zuidmeer-Jongejan, L., Asero, R., Barreales, L., Belohlavkova, S., De Bley, F., Bures, P., Clausen, M., Dubakiene, R., Gislason, D., Jedrzejczak-Czechowicz, M., Kowalski, M. L., Knulst, A. C., Kralimarkova, T., Le, T-M. and Lovegrove, A. 2015. Hazelnut allergy across Europe dissected molecularly: a EuroPrevall outpatient clinic survey. Journal Of Allergy And Clinical Immunology. 136, pp. 382-391. https://doi.org/10.1016/j.jaci.2014.12.1949

Biorefinery strategies for upgrading Distillers' Dried Grains with Solubles (DDGS)

A - Papers appearing in refereed journals
Chatzifragkou, A., Kosik, O., Prabhakumari, P. C., Lovegrove, A., Frazier, R. A., Shewry, P. R. and Charalampopoulos, D. 2015. Biorefinery strategies for upgrading Distillers' Dried Grains with Solubles (DDGS). Process Biochemistry. 50 (12), pp. 2194-2207. https://doi.org/10.1016/j.procbio.2015.09.005

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