Protecting Crops and the Environment

TitleProtecting Crops and the Environment
TypeScience Department
InstituteRothamsted Research
HeadJulian Smith
Executive AssistantDiane Roberts

Outputs

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A Mutagenomic Dissection of Virulence in the Fungal Wheat Pathogen Zymoseptoria tritici

F - Theses
Blyth, H.R. 2022. A Mutagenomic Dissection of Virulence in the Fungal Wheat Pathogen Zymoseptoria tritici. F - Theses University of Nottingham Biointeractions and Crop Protection, Rothamsted Research

Early Detection and Spread of Tomato Powdery Mildew (TPM) in Commercial Greenhouses

A - Papers appearing in refereed journals
Sokolidi, A., Webster, R., Milne, A. E., Clark, S. J., Clarkson, J., Bielik M., Morley, P. and West, J. S. 2022. Early Detection and Spread of Tomato Powdery Mildew (TPM) in Commercial Greenhouses. Phytopathology. 112 (11), pp. 49-49.

A cold high-pressure system over North China hinders the southward migration of Mythimna separata in autumn

A - Papers appearing in refereed journals
Zhu, J., Chen, X., Liu, J., Jiang, Y., Chen, F., Lu, J., Chen, H., Zhai, B., Reynolds, D. R., Chapman, J. W. and Hu, G. 2022. A cold high-pressure system over North China hinders the southward migration of Mythimna separata in autumn. Movement Ecology. 10, p. 54. https://doi.org/10.1186/s40462-022-00360-3

Spatial characteristics of the fungus powdery mildew (Erysiphe neolycopersici) on tomatoes and its spread in industrial greenhouses

A - Papers appearing in refereed journals
Sokolidi, A., Webster, R., Milne, A. E., Bielik, M., Morley, P., Clarkson, J. P. and West, J. S. 2022. Spatial characteristics of the fungus powdery mildew (Erysiphe neolycopersici) on tomatoes and its spread in industrial greenhouses. Biostatistics. 1 (1), pp. 18-30.

Quantifying inherent predictability and spatial synchrony in the aphid vector Myzus persicae - field-scale patterns of abundance and regional forecasting error in the UK

N - Datasets
Bell, J. R. 2022. Quantifying inherent predictability and spatial synchrony in the aphid vector Myzus persicae - field-scale patterns of abundance and regional forecasting error in the UK. Rothamsted Research. https://doi.org/10.23637/rothamsted.98qvq

Environmental DNA reveals diversity and abundance of Alternaria species in neighbouring heterogeneous landscapes in Worcester, UK.

A - Papers appearing in refereed journals
Apangu, G., Frisk, C. A., Petch, G. M., Muggia, L., Pallavicini, A., Hanson, M. and Skjoth, C. A. 2022. Environmental DNA reveals diversity and abundance of Alternaria species in neighbouring heterogeneous landscapes in Worcester, UK. Aerobiologia. 38, pp. 457-481. https://doi.org/10.1007/s10453-022-09760-9

Inconsistent results from trait-based analyses of moth trends point to complex drivers of change

A - Papers appearing in refereed journals
Tordoff, G. M., Dennis, E. B., Fox, R., Cook, P. M., Davis, T. M., Blumgart, D. and Bourn, N. A. D. 2022. Inconsistent results from trait-based analyses of moth trends point to complex drivers of change. Biodiversity and Conservation. 31, pp. 2999-3018. https://doi.org/10.1007/s10531-022-02469-8

Multi-tier archetypes to characterise British landscapes, farmland and farming practices

A - Papers appearing in refereed journals
Goodwin, C. E. D., Butikofer, L., Hatfield, J. H., Evans, P. M., Bullock, J. M., Storkey, J., Mead, A., Richter, G. M., Henrys, P. A., Pywell, R. F. and Redhead, J. W. 2022. Multi-tier archetypes to characterise British landscapes, farmland and farming practices. Environmental Research Letters. 17 (9), p. 095002. https://doi.org/10.1088/1748-9326/ac810e

Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen

N - Datasets
Chen, H., King, R., Smith, D., Bayon, C., Ashfield, T., Torriani, S., Kanyuka, K., Hammond-Kosack, K. E., Bieri, S. and Rudd, J. J. 2022. Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen. Rothamsted Research. https://doi.org/10.23637/rothamsted.98q90

Demography of Common Swifts (Apus apus) breeding in the UK associated with local weather but not aphid biomass

A - Papers appearing in refereed journals
Finch, T., Bell, J. R., Robinson, R. A. and Peach, W. J. 2022. Demography of Common Swifts (Apus apus) breeding in the UK associated with local weather but not aphid biomass. Ibis. 165 (2), pp. 420-435. https://doi.org/10.1111/ibi.13156

Using cloud radar to investigate the effect of rainfall on migratory insect flight

A - Papers appearing in refereed journals
Wainwright, C. E., Volponi, S. N., Stepanian, P. M., Reynolds, D. R. and Richter, D. H. 2022. Using cloud radar to investigate the effect of rainfall on migratory insect flight. Methods in ecology and evolution. https://doi.org/10.1111/2041-210X.14023

The "by-catch" recorded from selected Rothamsted light-traps concentrating on 2018 and 2019

A - Papers appearing in refereed journals
Sims, I., Cole, J. and Shortall, C. R. 2022. The "by-catch" recorded from selected Rothamsted light-traps concentrating on 2018 and 2019. British Journal of Entomology and Natural History. 35 (4), pp. 371-393.

(−)-Adaline from the Adalia Genus of Ladybirds Is a Potent Antagonist of Insect and Specific Mammalian Nicotinic Acetylcholine Receptors

A - Papers appearing in refereed journals
Richards, D. P., Patel, R. H., Duce, I. R., Khambay, B. P. S., Birkett, M. A., Pickett, J. A. and Mellor, I. R. 2022. (−)-Adaline from the Adalia Genus of Ladybirds Is a Potent Antagonist of Insect and Specific Mammalian Nicotinic Acetylcholine Receptors. Molecules. 27 (20), p. 7074. https://doi.org/10.3390/molecules27207074

Induction of distinct plant cell death programs by secreted proteins from the wheat pathogen Zymoseptoria tritici

A - Papers appearing in refereed journals
Welch, T., Bayon, C., Rudd, J. J., Kanyuka, K. and Kettles, G. J. 2022. Induction of distinct plant cell death programs by secreted proteins from the wheat pathogen Zymoseptoria tritici. Scientific Reports. 12, p. 17880. https://doi.org/10.1038/s41598-022-22660-9

Distinct roles for different autophagy-associated genes in the virulence of the fungal wheat pathogen Zymoseptoria tritici

A - Papers appearing in refereed journals
Child, H. T., Deeks, M. J., Haynes, K., Rudd, J. J. and Bates, S. 2022. Distinct roles for different autophagy-associated genes in the virulence of the fungal wheat pathogen Zymoseptoria tritici. Fungal Genetics and Biology. 163, p. 103748. https://doi.org/10.1016/j.fgb.2022.103748

Co-Inoculation of Plant-Growth-Promoting Bacteria Modulates Physiological and Biochemical Responses of Perennial Ryegrass to Water Deficit

A - Papers appearing in refereed journals
Cortes, S., Vargas, C. D., Alvarez-Florez, F. and Estrada-Bonilla, G. 2022. Co-Inoculation of Plant-Growth-Promoting Bacteria Modulates Physiological and Biochemical Responses of Perennial Ryegrass to Water Deficit. Plants - Basel. 11 (19), p. 2543. https://doi.org/10.3390/plants11192543

Diversity, composition, altitude, and seasonality of high-altitude windborne migrating mosquitoes in the Sahel: Implications for disease transmission

A - Papers appearing in refereed journals
Yaro, A. S., Linton, Y., Dao, A., Diallo, M., Sanogo, Z. L., Samake, D., Ousman, Y., Kouam, C., Krajacich, B. J., Faiman, R., Bamou, R., Woo, J., Chapman, J. W., Reynolds, D. R. and Lehmann, T. 2022. Diversity, composition, altitude, and seasonality of high-altitude windborne migrating mosquitoes in the Sahel: Implications for disease transmission. Frontiers in Epidemiology. 2, p. 1001782. https://doi.org/10.3389/fepid.2022.1001782

Enhancing the oral and topical insecticidal efficacy of a commercialized spider venom peptide biopesticide via fusion to the carrier snowdrop lectin (Galanthus nivalis agglutinin)

A - Papers appearing in refereed journals
Sukiran, N. A., Pyati, P., Willis, C. E., Brown, A. P., Readshaw, J. J. and Fitches, E. C. 2022. Enhancing the oral and topical insecticidal efficacy of a commercialized spider venom peptide biopesticide via fusion to the carrier snowdrop lectin (Galanthus nivalis agglutinin). Pest Management Science. https://doi.org/10.1002/ps.7198

The Insect Crisis

G - Articles in popular magazines and other technical publications
Shortall, C. R. 2022. The Insect Crisis. Antenna.

A large bioassay identifies Stb resistance genes that provide broad resistance against Septoria tritici blotch Disease in the UK

A - Papers appearing in refereed journals
Tidd, H., Rudd, J. J., Ray, R. V., Bryant, R. and Kanyuka, K. 2022. A large bioassay identifies Stb resistance genes that provide broad resistance against Septoria tritici blotch Disease in the UK. Frontiers in Plant Science. 13, p. 1070986. https://doi.org/10.3389/fpls.2022.1070986

Disorder or a new order - How climate change affects phenological variability

A - Papers appearing in refereed journals
Stemkovski, M., Bell, J. R., Ellwood, E. R., Inouye, B. D., Kobori, H., Lee, S. D., Lloyd-Evans, T., Primack, R. B., Templ, B. and Pearse, W. D. 2022. Disorder or a new order - How climate change affects phenological variability. Ecology. 104 (1), p. e3846. https://doi.org/10.1002/ecy.3846

The effect of soil type on yield and micronutrient content of pasture species

A - Papers appearing in refereed journals
Darch, T., Blackwell, M. S. A., Hood, J., Lee, M. R. F., Storkey, J., Beaumont, D. A. and McGrath, S. P. 2022. The effect of soil type on yield and micronutrient content of pasture species. PLOS ONE. 17 (11), p. e0277091. https://doi.org/10.1371/journal.pone.0277091

Doublesex homolog is sex-specifically spliced and governs the sexual differentiation process in the whitefly Bemisia tabaci AsiaII-1

A - Papers appearing in refereed journals
Brar, G. S., Singh, S., Shukla, J. N., Kumar, V. J., Davies, T. G. E., Kaur, G., Pandher, S and Kaur, R. 2022. Doublesex homolog is sex-specifically spliced and governs the sexual differentiation process in the whitefly Bemisia tabaci AsiaII-1. Gene. 850, p. 146929. https://doi.org/10.1016/j.gene.2022.146929

Opportunities and challenges for harvest weed seed control in European cropping systems

A - Papers appearing in refereed journals
Akhter, M. J. ., Sonderskov, M., Loddo, D., Ulber, L., Hull, R. I. and Kudsk, P. 2022. Opportunities and challenges for harvest weed seed control in European cropping systems. European Journal of Agronomy. 142, p. 126639. https://doi.org/10.1016/j.eja.2022.126639

Quantifying inherent predictability and spatial synchrony in the aphid vector Myzus persicae - field-scale patterns of abundance and regional forecasting error in the UK

A - Papers appearing in refereed journals
Bell, J. R., Clark, S. J., Stevens, M. and Mead, A. 2022. Quantifying inherent predictability and spatial synchrony in the aphid vector Myzus persicae - field-scale patterns of abundance and regional forecasting error in the UK. Pest Management Science. p. 7292. https://doi.org/10.1002/ps.7292

Applying genetic technologies to combat infectious diseases in aquaculture

A - Papers appearing in refereed journals
Robinson, N. A., Robledo, D., Sveen, L., Daniels, R. R., Krasnov, A., Coates, A., Jin, Y. H., Barrett, L. T., Lillehammer, M., Kettunen, A. H., Phillips, B. L., Dempster, T., Doeschl-Wilson, A., Samsing, F., Difford, G., Salisbury, S., Gjerde, B., Haugen, J., Burgerhout, E., Dagnachew, B. S., Kurian, D., Fast, M. D., Rye, M., Salazar, M., Bron, J. E., Monaghan, S. J., Jacq, C., Birkett, M. A., Browman, H. I., Skiftesvik, A. B., Fields, D. M., Selander, E., Bui, S., Sonesson, A., Skugor, S., Knutsdatter Ostbye, T-K. and Houston, R. D. 2022. Applying genetic technologies to combat infectious diseases in aquaculture. Reviews in Aquaculture. pp. 1-45. https://doi.org/10.1111/raq.12733

Apoplastic and vascular defences

A - Papers appearing in refereed journals
Darino, M., Kanyuka, K. and Hammond-Kosack, K. E. 2022. Apoplastic and vascular defences. Essays in Biochemistry. 66 (5), pp. 595-605. https://doi.org/10.1042/EBC20220159

Impact of endophytic colonization by entomopathogenic fungi on the behavior and life history of the tobacco peach aphid Myzus persicae var. nicotianae

A - Papers appearing in refereed journals
Vuts, J., Wilberts, L., Caulfield, J. C., Thomas, G., Birkett, M. A., Herrera-Malaver, B., Verstrepen, K. J., Sobhy, I. S., Jacquemyn, H. and Lievens, B. 2022. Impact of endophytic colonization by entomopathogenic fungi on the behavior and life history of the tobacco peach aphid Myzus persicae var. nicotianae. PLOS ONE. 17 (9), p. e0273791. https://doi.org/10.1371/journal.pone.0273791

Genetic analysis of Colletotrichum siamense populations from different hosts and counties in Hainan, China using microsatellite markers.

A - Papers appearing in refereed journals
Cao, X., Zhang, Q., He, Y., Che, H., Lin, Y., Luo, D., West, J. S. and Xu, X. 2022. Genetic analysis of Colletotrichum siamense populations from different hosts and counties in Hainan, China using microsatellite markers. Plant Disease. https://doi.org/10.1094/PDIS-03-22-0576-RE

Development and characterization of microsatellite markers for the rubber tree powdery mildew pathogen Oidium heveae

A - Papers appearing in refereed journals
Han, Q., He, Y., Che, H., Luo, D., West, J. S. and Cao, X. 2022. Development and characterization of microsatellite markers for the rubber tree powdery mildew pathogen Oidium heveae. European Journal of Plant Pathology. 164, pp. 253-262. https://doi.org/10.1007/s10658-022-02555-1

Huge spring migrations of insects from the Middle East to Europe - quantifying the migratory assemblage and ecosystem services

A - Papers appearing in refereed journals
Hawkes, W. L. S., Walliker, E., Gao, B., Forster, O., Lacey, K., Doyle, T., Massy, R., Roberts, N. W., Reynolds, D. R., Ozden, O., Chapman, J. W. and Wotton, K. R. 2022. Huge spring migrations of insects from the Middle East to Europe - quantifying the migratory assemblage and ecosystem services. Ecography. 10, p. e06288. https://doi.org/10.1111/ecog.06288

Early Detection and Spread of Tomato Powdery Mildew (TPM) in Commercial Greenhouses

Conference poster
Sokolidi, A., Webster, R., Milne, A. E., Clark, S. J., Clarkson, J., Bielik M., Morley, P. and West, J. S. 2022. Early Detection and Spread of Tomato Powdery Mildew (TPM) in Commercial Greenhouses. APS AGM - Plant Health 2022. Pittsburgh, Pennsylvania, USA 06 Aug 2022

The effect of soil type on yield and macro- and micronutrient content of a wide range of pasture species

N - Datasets
Darch, T., Blackwell, M. S. A., Hood, J., Lee, M. R. F., Storkey, J., Beaumont, D. A. and McGrath, S. P. 2022. The effect of soil type on yield and macro- and micronutrient content of a wide range of pasture species. Rothamsted Research. https://doi.org/10.23637/rothamsted.989q8

Elemental concentrations and growth characteristics of wild-type and cultivated varieties of pasture species

N - Datasets
Darch, T., McGrath, S. P., Lee, M. R. F., Beaumont, D. A., Blackwell, M. S. A., Horrocks, C. A., Hood, J. and Storkey, J. 2022. Elemental concentrations and growth characteristics of wild-type and cultivated varieties of pasture species. Rothamsted Research. https://doi.org/10.23637/rothamsted.989q7

Individual tracking reveals long-distance flight-path control in a nocturnally migrating moth

A - Papers appearing in refereed journals
Menz, M. H. M., Scacco, M., Burki-Spycher, H-M., Williams, H. J., Reynolds, D. R., Chapman, J. W. and Wikelski, M. 2022. Individual tracking reveals long-distance flight-path control in a nocturnally migrating moth. Science. 377 (6607), pp. 764-768. https://doi.org/10.1126/science.abn1663

Farmland Carabids identification guide

E - Books edited/written by staff member, alone/with others
Jowett, K. 2022. Farmland Carabids identification guide. Harpenden Rothamsted Research.

An overlooked mechanism underlying the attenuated temperature response of soil heterotrophic respiration

A - Papers appearing in refereed journals
Zhang, X., Whalley, P. A., Gregory, A. S., Whalley, W. R., Coleman, K., Neal, A. L., Mooney, S. J., Soga, K. and Illangasekare, T. H. 2022. An overlooked mechanism underlying the attenuated temperature response of soil heterotrophic respiration. Journal of the Royal Society Interface. 19 (192), p. 20220276. https://doi.org/10.1098/rsif.2022.0276

A heteroskedastic model of park grass spring hay yields in response to weather suggests continuing yield decline with climate change in future decades

A - Papers appearing in refereed journals
Addy, J. W. G., Ellis, R. H., MacLaren, C., Macdonald, A. J., Semenov, M. A. and Mead, A. 2022. A heteroskedastic model of park grass spring hay yields in response to weather suggests continuing yield decline with climate change in future decades. Journal of the Royal Society Interface. 19 (193), p. 20220361. https://doi.org/10.1098/rsif.2022.0361

Priorities for UK soils

A - Papers appearing in refereed journals
Peake, L. R., Dawson, L. A., Price, J. P. N., Aller, M. F., Bhogal, A., Doody, D. G., Gregory, A. S. and McKinley, J. M. 2022. Priorities for UK soils. Geoderma Regional. 29, p. e00512. https://doi.org/10.1016/j.geodrs.2022.e00512

P450 gene duplication and divergence led to the evolution of dual novel functions and insecticide cross-resistance in the brown planthopper Nilaparvata lugens

A - Papers appearing in refereed journals
Duarte, A., Pym, A., Garrood, W. T., Troczka, B. J., Zimmer, C. T., Davies, T. G. E., Nauen, R., O'Reilly, O. A. and Bass, C. G. 2022. P450 gene duplication and divergence led to the evolution of dual novel functions and insecticide cross-resistance in the brown planthopper Nilaparvata lugens. PLOS Genetics. 18 (6), p. e1010279. https://doi.org/10.1371/journal.pgen.1010279

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