TPM - Tailoring Plant Metabolism - Work package 1 (WP1) - High value lipids for health and industry
Repository project
| Project dates | 01 Apr 2017 to end of 31 Mar 2022 |
|---|---|
| Researchers | |
| Principal Investigator | Freddie Theodoulou |
| Co-Investigator | Johnathan Napier |
| Funder | Biotechnology and Biological Sciences Research Council |
| Project number | I0420 |
| I0400 | |
| Department | Plant Sciences |
| Research fish code | BBS/E/C/000I0420 |
| Grant ID | BBS/E/C/000I0420 |
Outputs
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N-terminomics reveals control of Arabidopsis seed storage proteins and proteases by the Arg/N-end rule pathway
A - Papers appearing in refereed journals
Zhang, H., Gannon, L., Hassall, K. L., Deery, M. J., Gibbs, D. J., Holdsworth, M. J., Van der Hoorn, R. A. L., Lilley, K. S. and Theodoulou, F. L. 2018. N-terminomics reveals control of Arabidopsis seed storage proteins and proteases by the Arg/N-end rule pathway. New Phytologist. 218 (3), pp. 1106-1126. https://doi.org/10.1111/nph.14909
Natural variation in acyl editing is a determinant of seed storage oil composition
A - Papers appearing in refereed journals
Menard, G. N., Bryant, F. M., Kelly, A. A., Craddock, C. P., Lavagi, I., Hassani-Pak, K., Kurup, S. and Eastmond, P. J. 2018. Natural variation in acyl editing is a determinant of seed storage oil composition. Scientific Reports. 8, p. 17346. https://doi.org/10.1038/s41598-018-35136-6
New insights in the composition of wax and sterol esters in common and mutant sunflower oils revealed by ESI-MS/MS
A - Papers appearing in refereed journals
Broughton, R., Ruíz-Lopez, N., Hassall, K. L., Martínez-Force, E., Garcés, R., Salas, J. J. and Beaudoin, F. 2018. New insights in the composition of wax and sterol esters in common and mutant sunflower oils revealed by ESI-MS/MS. Food Chemistry. 269, pp. 70-79. https://doi.org/10.1016/j.foodchem.2018.06.135
Nutritional enhancement in plants – green and greener
A - Papers appearing in refereed journals
Napier, J. A. and Sayanova, O. V. 2020. Nutritional enhancement in plants – green and greener. Current Opinion in Biotechnology. 61 (February), pp. 122-127. https://doi.org/10.1016/j.copbio.2019.12.010
Oat and lipolysis: Food matrix effect
A - Papers appearing in refereed journals
Wilde, P. J., Garcia-Llatas, G., Lagarda, M. J, Haslam, R. P. and Grundy, M. M. L. 2019. Oat and lipolysis: Food matrix effect. Food Chemistry. 278 (25 April), pp. 683-691. https://doi.org/10.1016/j.foodchem.2018.11.113
Oil from transgenic Camelina sativa as a source of EPA and DHA in feed for European sea bass (Dicentrarchus labrax L.)
A - Papers appearing in refereed journals
Betancor, M. B., MacEwan, A., Sprague, M., Gong, X., Montero, D., Han, L., Napier, J. A., Norambuena, F., Izquierdo, M. and Tocher, D. R. 2021. Oil from transgenic Camelina sativa as a source of EPA and DHA in feed for European sea bass (Dicentrarchus labrax L.). Aquaculture. 530 (15 January), p. 735759. https://doi.org/10.1016/j.aquaculture.2020.735759
Oil from transgenic Camelina sativa containing over 25 % n-3 long-chain PUFA as the major lipid source in feed for Atlantic salmon (Salmo salar)
A - Papers appearing in refereed journals
Betancor, M. B., Li, K., Bucerzan, V. S., Sprague, M., Sayanova, O. V., Usher, S. L., Han, L., Norambuena, F., Torrissen, O., Napier, J. A., Tocher, D. R. and Olsen, R. E. 2018. Oil from transgenic Camelina sativa containing over 25 % n-3 long-chain PUFA as the major lipid source in feed for Atlantic salmon (Salmo salar). British Journal Of Nutrition. 119 (12), pp. 1378-1392. https://doi.org/10.1017/S0007114518001125
Omega-3 Long-Chain Polyunsaturated Fatty Acids, EPA and DHA: Bridging the Gap between Supply and Demand Nutrients
A - Papers appearing in refereed journals
Tocher, D. R., Betancor, M. B., Sprague, M., Olsen, R. E. and Napier, J. A. 2019. Omega-3 Long-Chain Polyunsaturated Fatty Acids, EPA and DHA: Bridging the Gap between Supply and Demand Nutrients . Nutrients. 11 (1), p. 89. https://doi.org/10.3390/nu11010089
Overexpression of an endogenous type 2 diacylglycerol acyltransferase in the marine diatom Phaeodactylum tricornutum enhances lipid production and omega-3 long-chain polyunsaturated fatty acid content
A - Papers appearing in refereed journals
Haslam, R. P., Hamilton, M. L., Economou, C., Smith, Richard T., Hassall, K. L., Napier, J. A. and Sayanova, O. V. 2020. Overexpression of an endogenous type 2 diacylglycerol acyltransferase in the marine diatom Phaeodactylum tricornutum enhances lipid production and omega-3 long-chain polyunsaturated fatty acid content . Biotechnology for Biofuels. 13 (87). https://doi.org/10.1186/s13068-020-01726-8
Phosphorus Use Efficiency and Fertilizers: future opportunities for improvements
A - Papers appearing in refereed journals
Blackwell, M. S. A., Darch, T. and Haslam, R. P. 2019. Phosphorus Use Efficiency and Fertilizers: future opportunities for improvements. Frontiers of Agricultural Science and Engineering - FASE. 6 (4), pp. 332-340. https://doi.org/10.15302/J-FASE-2019274
Plant proteostasis-a proven and promising target for crop improvement - Editorial
A - Papers appearing in refereed journals
Theodoulou, F. L., Orosa-Puente, B., Trujillo, M. and Rubio V. 2022. Plant proteostasis-a proven and promising target for crop improvement - Editorial. Essays in Biochemistry. 66 (2), pp. 75-85. https://doi.org/10.1042/EBC20210078
Plastidial acyl carrier protein Δ9-desaturase modulates eicosapentaenoic acid biosynthesis and triacylglycerol accumulation in Phaeodactylum tricornutum
A - Papers appearing in refereed journals
Smith, R., Jouhet, J., Gandini, C., Nekrasov, V., Marechal, E., Napier, J. A. and Sayanova, O. V. 2021. Plastidial acyl carrier protein Δ9-desaturase modulates eicosapentaenoic acid biosynthesis and triacylglycerol accumulation in Phaeodactylum tricornutum. Plant Journal. 106 (5), pp. 1247-1259. https://doi.org/10.1111/tpj.15231
Relative Protein Lifetime Measurement in Plants Using Tandem Fluorescent Protein Timers
B - Book chapters etc edited externally
Zhang, H., Linster, E., Wirtz, M. and Theodoulou, F. L. 2022. Relative Protein Lifetime Measurement in Plants Using Tandem Fluorescent Protein Timers. in: Lois, L. M. and Trujillo, M. (ed.) Plant Proteostasis New York Humana Press Inc. pp. 201-220
Response of cell wall composition and RNA-seq transcriptome to methyl-jasmonate in Brachypodium distachyon callus
A - Papers appearing in refereed journals
Hyde, L. S., Pellny, T. K., Freeman, J., Michaelson, L. V., Simister, R., McQueen-Mason, S. J. and Mitchell, R. A. C. 2018. Response of cell wall composition and RNA-seq transcriptome to methyl-jasmonate in Brachypodium distachyon callus . Planta. 248 (5), pp. 1213-1229. https://doi.org/10.1007/s00425-018-2968-9
Something in the air
A - Papers appearing in refereed journals
Napier, J. A. 2022. Something in the air. Nature Sustainability. 5 (11), pp. 916-917. https://doi.org/10.1038/s41893-022-00954-0
Sphingolipids: towards an integrated view of metabolism during the plant stress response
A - Papers appearing in refereed journals
Huby, E., Napier, J. A., Baillieul, F., Michaelson, L. V. and Dhondt-Cordelier, S. 2019. Sphingolipids: towards an integrated view of metabolism during the plant stress response. New Phytologist. https://doi.org/10.1111/nph.15997
Suppression of a single BAHD gene in Setaria viridis causes large, stable decreases in cell wall feruloylation and increases biomass digestibility
A - Papers appearing in refereed journals
De Souza, W. R., Martins, P. K., Freeman, J., Pellny, T. K., Michaelson, L. V., Sampaio, B. L., Vinecky, F., Ribeiro, A. P., Da Cunha, B. A. D. B., Kobayashi, A. K., De Oliveira, P. A., Campanha, R. B., Pacheco, T. F., Martarello, D. C. I., Marchiosi, R., Ferrarese-Filho, O., Dos Santos, W. D., Tramontina, R., Squina, F. M., Centeno, D. C., Gaspar, M., Braga, M. R., Tine, M. A. S., Ralph, J., Mitchell, R. A. C. and Molinari, H. B. C. 2018. Suppression of a single BAHD gene in Setaria viridis causes large, stable decreases in cell wall feruloylation and increases biomass digestibility. New Phytologist. 218 (1), pp. 81-93. https://doi.org/10.1111/nph.14970
Synaptotagmins at the endoplasmic reticulum–plasma membrane contact sites maintain diacylglycerol homeostasis during abiotic stress
A - Papers appearing in refereed journals
Ruiz-Lopez, N., Perez-Sancho, J., Del Valle, A. E., Haslam, R. P., Vanneste, S., Catala, R., Perea-Resa, C., Van Damme, D., Garcia-Hernandez, S., Albert A., Vallarino, J., Lin, J., Friml, J., Macho, A. P., Salinas, J., Rosado, A., Napier, J. A., Amorim-Silva, V. and Botella, M. A. 2021. Synaptotagmins at the endoplasmic reticulum–plasma membrane contact sites maintain diacylglycerol homeostasis during abiotic stress. The Plant Cell. 33 (7), p. 2431–2453. https://doi.org/10.1093/plcell/koab122
Tackling functional redundancy of Arabidopsis fatty acid elongase complexes
A - Papers appearing in refereed journals
Batsale, M., Alonso, M., Pascal, S., Thoraval, D., Haslam, R. P., Beaudoin, F., Domergue, F. and Joubes, J. 2023. Tackling functional redundancy of Arabidopsis fatty acid elongase complexes. Frontiers in Plant Science. 14, p. 1107333. https://doi.org/10.3389/fpls.2023.1107333
Tailoring seed oil composition in the real world: optimising omega -3 long chain polyunsaturated fatty acid accumulation in transgenic Camelina sativa
A - Papers appearing in refereed journals
Usher, S. L., Han, L., Haslam, R. P., Michaelson, L. V., Sturtevant, D., Aziz, M., Chapman, K. D., Sayanova, O. V. and Napier, J. A. 2017. Tailoring seed oil composition in the real world: optimising omega -3 long chain polyunsaturated fatty acid accumulation in transgenic Camelina sativa. Scientific Reports. 7 (1), p. 6570. https://doi.org/10.1038/s41598-017-06838-0
Tandem fluorescent protein timers for non-invasive relative protein lifetime measurement in plants
A - Papers appearing in refereed journals
Zhang, H., Linster, E., Gannon, L., Leemhuis, W., Rundle, C., Theodoulou, F. L. and Wirtz, M. 2019. Tandem fluorescent protein timers for non-invasive relative protein lifetime measurement in plants. Plant Physiology. https://doi.org/10.1104/pp.19.00051
Techniques for the Measurement of Molecular Species of Acyl-CoA in Plants and Microalgae
B - Book chapters etc edited externally
Haslam, R. P. and Larson, T. R. 2021. Techniques for the Measurement of Molecular Species of Acyl-CoA in Plants and Microalgae. in: Bartels, D. and Dobermann, P. (ed.) Plant Lipids: Methods and Protocols, Methods in Molecular Biology Springer Nature. pp. 203-218
The Arabidopsis GORK K+-channel is phosphorylated by calcium-dependent protein kinase 21 (CPK21), which in turn is activated by 14-3-3 proteins
A - Papers appearing in refereed journals
Van Kleef, P. J. M., Gao, J., Mol, S., Zwart, N., Zhang, H., Li, K. W. and De Boer, A. H. 2018. The Arabidopsis GORK K+-channel is phosphorylated by calcium-dependent protein kinase 21 (CPK21), which in turn is activated by 14-3-3 proteins. Plant Physiology and Biochemistry. 125, pp. 219-231. https://doi.org/10.1016/j.plaphy.2018.02.013
The Arabidopsis thaliana N-recognin E3 ligase PROTEOLYSIS1 influences the immune response.
A - Papers appearing in refereed journals
Till, C. J., Vicente, J., Zhang, H., Oszvald, M., Deery, M. J., Pastor, V., Lilley, K. S., Ray, R. V., Theodoulou, F. L. and Holdsworth, M. J. 2019. The Arabidopsis thaliana N-recognin E3 ligase PROTEOLYSIS1 influences the immune response. Plant Direct. 3 (12), p. e00194. https://doi.org/10.1002/pld3.194
The challenges of delivering genetically modified crops with nutritional enhancement traits
A - Papers appearing in refereed journals
Napier, J. A., Haslam, R. P., Tsalavouta, M. and Sayanova, O. V. 2019. The challenges of delivering genetically modified crops with nutritional enhancement traits. Nature Plants. 5, pp. 563-567. https://doi.org/10.1038/s41477-019-0430-z
The impact of reducing fatty acid desaturation on the composition and thermal stability of rapeseed oil
A - Papers appearing in refereed journals
Kaur, H., Wang, L., Stawniak, N., Sloan, R., Van-Erp, H., Eastmond, P. J. and Bancroft, I. 2019. The impact of reducing fatty acid desaturation on the composition and thermal stability of rapeseed oil . Plant Biotechnology Journal. https://doi.org/10.1111/pbi.13263
The overexpression of rice ACYL-CoA-BINDING PROTEIN2 increases grain size and bran oil content in transgenic rice
A - Papers appearing in refereed journals
Guo, Z.-H., Haslam, R. P., Michaelson, L. V., Young, E. C., Lung, S. C., Napier, J. A. and Chye, M.L. 2019. The overexpression of rice ACYL-CoA-BINDING PROTEIN2 increases grain size and bran oil content in transgenic rice. The Plant Journal. https://doi.org/10.1111/tpj.14503
The Production of EPA and DHA in Transgenic Plants as a Sustainable, Environmentally Friendly Source of Omega-3 Fish Oils for Use in Novel Foods.
A - Papers appearing in refereed journals
Napier, J. A. 2021. The Production of EPA and DHA in Transgenic Plants as a Sustainable, Environmentally Friendly Source of Omega-3 Fish Oils for Use in Novel Foods. Journal Of The American Oil Chemists Society. 98 (S1), pp. 126-126. https://doi.org/10.1002/aocs.12529
Transgenic camelina oil is an effective source of eicosapentaenoic acid and docosahexaenoic acid in diets for farmed rainbow trout, in terms of growth, tissue fatty acid content, and fillet sensory properties
A - Papers appearing in refereed journals
Osmond, A. T. Y., Arts, M. T., Bazinet, R. P., Napier, J. A., Han, L. and Colombo, S. M. 2021. Transgenic camelina oil is an effective source of eicosapentaenoic acid and docosahexaenoic acid in diets for farmed rainbow trout, in terms of growth, tissue fatty acid content, and fillet sensory properties. Journal of the World Aquaculture Society. 54 (4), pp. 961-986. https://doi.org/10.1111/jwas.12788
Uncovering Trait Associations Resulting in Maximal Seed Yield in Winter and Spring Oilseed Rape
A - Papers appearing in refereed journals
Siles-Suarez, L., Hassall, K. L., Sanchis-Gritsch, C., Eastmond, P. J. and Kurup, S. 2021. Uncovering Trait Associations Resulting in Maximal Seed Yield in Winter and Spring Oilseed Rape. Frontiers in Plant Science. 12 (6 September), p. 697576. https://doi.org/10.3389/fpls.2021.697576
Update on GM canola crops as novel sources of omega-3 fish oils
A - Papers appearing in refereed journals
Napier, J. A., Olsen, R-E. and Tocher, D. R. 2019. Update on GM canola crops as novel sources of omega-3 fish oils. Plant Biotechnology Journal. 17 (4), pp. 703-705. https://doi.org/10.1111/pbi.13045
Using field evaluation and systematic iteration to rationalize the accumulation of omega-3 long-chain polyunsaturated fatty acids in transgenic Camelina sativa
A - Papers appearing in refereed journals
Han, L., Silvestre, S., Sayanova, O. V., Haslam, R. P. and Napier, J. A. 2022. Using field evaluation and systematic iteration to rationalize the accumulation of omega-3 long-chain polyunsaturated fatty acids in transgenic Camelina sativa. Plant Biotechnology Journal. 20 (9), pp. 1833-1852. https://doi.org/10.1111/pbi.13867
Using Hermetia illucens to process Ugandan waragi waste
A - Papers appearing in refereed journals
Dobermann, D., Field, L. M. and Michaelson, L. V. 2018. Using Hermetia illucens to process Ugandan waragi waste . Journal of Cleaner Production. 211 (20 February), pp. 303-308. https://doi.org/10.1016/j.jclepro.2018.11.176
Using lipidomics to reveal details of lipid accumulation in developing seeds from oilseed rape (Brassica napus L.)
A - Papers appearing in refereed journals
Haslam, R. P., Cazenave-Gassiot, A., Guschina, I.A., Wenk, M.R., Woodfield, H.K. and Harwood, J.L. 2018. Using lipidomics to reveal details of lipid accumulation in developing seeds from oilseed rape (Brassica napus L.). Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids. 1863 (3), pp. 339-348. https://doi.org/10.1016/j.bbalip.2017.12.010