Sustainable Soils and Crops

TitleSustainable Soils and Crops
TypeScience Department
InstituteRothamsted Research
HeadMartin Broadley
Executive AssistantSally Murdoch
Natalia Deas

Outputs

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A conserved fungal glycosyltransferase facilitates pathogenesis of plants by enabling hyphal growth on solid surfaces

A - Papers appearing in refereed journals
King, R., Urban, M., Lauder, R. P., Hawkins, N. J., Evans, M., Plummer, A., Halsey, K., Lovegrove, A., Hammond-Kosack, K. E. and Rudd, J. J. 2017. A conserved fungal glycosyltransferase facilitates pathogenesis of plants by enabling hyphal growth on solid surfaces. PLOS Pathogens. 13 (10), p. e1006672. https://doi.org/10.1371/journal.ppat.1006672

A curated gluten protein sequence database to support development of proteomics methods for determination of gluten in gluten-free foods

A - Papers appearing in refereed journals
Bromilow, S., Gethings, L. A., Buckley, M., Bromley, M., Shewry, P. R., Langridge, J. I. and Clare Mills, E. N. 2017. A curated gluten protein sequence database to support development of proteomics methods for determination of gluten in gluten-free foods. Journal of Proteomics. 163, pp. 67-75. https://doi.org/10.1016/j.jprot.2017.03.026

A dual porous model to predict the effects of soil structure on denitrification and N2O emission

C2 - Non-edited contributions to conferences
Laudone, G. M., Matthews, G. P., Bird, N. R. A., Whalley, W. R., Cardenas, L. M. and Gregory, A. S. 2012. A dual porous model to predict the effects of soil structure on denitrification and N2O emission. Abstracts 4th International Congress Eurosoil 2012, Bari, 2-6 July 2012 .

A dual-porous, biophysical void structure model of soil for the understanding of the conditions causing nitrous oxide emission

C2 - Non-edited contributions to conferences
Matthews, G. P., Laudone, G. M., Whalley, W. R., Bird, N. R. A., Gregory, A. S., Cardenas, L. M. and Misselbrook, T. H. 2010. A dual-porous, biophysical void structure model of soil for the understanding of the conditions causing nitrous oxide emission. European Geosciences Union (EGU).

A dual-porous, inverse model of water retention to study biological and hydrological interactions in soil

A - Papers appearing in refereed journals
Laudone, G. M., Matthews, G. P., Gregory, A. S., Bird, N. R. A. and Whalley, W. R. 2013. A dual-porous, inverse model of water retention to study biological and hydrological interactions in soil. European Journal of Soil Science. 64 (3), pp. 345-356. https://doi.org/10.1111/ejss.12055

A European network of long-term sites for studies on soil organic matter

A - Papers appearing in refereed journals
Powlson, D. S., Smith, P., Coleman, K., Smith, J. U., Glendining, M. J., Korschens, M. and Franko, U. 1998. A European network of long-term sites for studies on soil organic matter. Soil & Tillage Research. 47 (3/4), pp. 263-274. https://doi.org/10.1016/S0167-1987(98)00115-9

A European network of long-term sites for studies on soil organic matter

C2 - Non-edited contributions to conferences
Powlson, D. S., Smith, P., Coleman, K., Smith, J. U., Glendining, M. J., Korschens, M. and Franko, U. 1995. A European network of long-term sites for studies on soil organic matter. Abstracts ASA/SSSA Meeting, St Louis, November 1995 .

A genomic network to monitor Earth

G - Articles in popular magazines and other technical publications
Davies, N., Field, D. and Hirsch, P. R. 2012. A genomic network to monitor Earth. Nature. 481 (7380), p. 145. https://doi.org/10.1038/481145a

A gradual rather than abrupt increase in soil strength gives better root penetration of strong layers

A - Papers appearing in refereed journals
Clark, L. J., Ferraris, S., Price, A. H. and Whalley, W. R. 2008. A gradual rather than abrupt increase in soil strength gives better root penetration of strong layers. Plant and Soil. 307, pp. 235-242. https://doi.org/10.1007/s11104-008-9602-8

A herbicide safener-induced MRP homologue from wheat

C2 - Non-edited contributions to conferences
Theodoulou, F. L., Clark, I. M., Pallett, K. E. and Hallahan, D. L. 1998. A herbicide safener-induced MRP homologue from wheat. Abstracts 11th International Workshop on Plant Membrane Biology, Cambridge, 9-14 August 1998 . pp. 77

A heteroskedastic model of park grass spring hay yields in response to weather suggests continuing yield decline with climate change in future decades

A - Papers appearing in refereed journals
Addy, J. W. G., Ellis, R. H., MacLaren, C., Macdonald, A. J., Semenov, M. A. and Mead, A. 2022. A heteroskedastic model of park grass spring hay yields in response to weather suggests continuing yield decline with climate change in future decades. Journal of the Royal Society Interface. 19 (193), p. 20220361. https://doi.org/10.1098/rsif.2022.0361

A high resolution 1H magic angle spinning NMR study of high M r subunit of wheat glutenin

A - Papers appearing in refereed journals
Alberti, E., Humpfer, E., Spraul, M., Gilbert, S. M., Tatham, A. S., Shewry, P. R. and Gil, A. M. 2001. A high resolution 1H magic angle spinning NMR study of high M r subunit of wheat glutenin. Biopolymers. 58, pp. 33-45.

A high soluble-fibre allele in wheat encodes a defective cell wall peroxidase responsible for dimerization of ferulate moieties on arabinoxylan

A - Papers appearing in refereed journals
Mitchell, R. A. C., Oszvald, M., Pellny, T. K., Freeman, J., Halsey, K., Sparks, C. A., Huttly, A. K., Specel, S., Leverington-Waite, M., Griffiths, S., Shewry, P. R. and Lovegrove, A. 2023. A high soluble-fibre allele in wheat encodes a defective cell wall peroxidase responsible for dimerization of ferulate moieties on arabinoxylan. bioRxiv. https://doi.org/10.1101/2023.03.08.531735

A high-yielding traits experiment for modeling potential production of wheat: field experiments and AgMIP-Wheat multi-model simulations

A - Papers appearing in refereed journals
Guarin, J. R., Martre, P., Ewert, F., Webber, H., Dueri, S., Calderini, D., Reynolds, M., Molero, G., Miralles, D., Slafer, G. A., Giunta, F., Pequano, D. N. L., Stella, T., Ahmed, M., Alerman, P. D., Basso, B., Berger, A. G., Bindi, M., Bracho-Mujica, G., Cammarano, D., Chen, Y., Dumont, B., Rezaei, E. .E, Fereres, E., Ferrise, R., Gaiser, T., Gao, Y., Garcia-Vila, M., Gayler, S., Hochman, Z., Hoogenboom, G., Hunt, L. A., Kersebaum, K. C., Nendel, C., Olesen, J. E., Palosuo, T., Priesack, E., Pullens, J. W. M., Rodriguez ,A., Rotter, R. P., Ruiz Ramos, M., Semenov, M. A., Senapati, N., Siebert,S., Srivastava, A. K., Stockle, C., Supit, I., Tao, F., Thorburn, P., Wang, E., Weber, T. K. D., Xiao, L., Zhang, Z., Zhao, C., Zhao, J., Zhao, Z., Zhu, Y. and Asseng, S. 2023. A high-yielding traits experiment for modeling potential production of wheat: field experiments and AgMIP-Wheat multi-model simulations. Open Data Journal for Agricultural Research (ODjAR). 9, pp. 26-33. https://doi.org/10.18174/odjar.v9i0.18573

A hydro-mechanical-damage fully coupled cohesive phase field model for complicated fracking simulations in poroelastic media

A - Papers appearing in refereed journals
Lia, H., Lei, H., Yang, Z., Wu, J., Zhang, X. and Li, S. 2022. A hydro-mechanical-damage fully coupled cohesive phase field model for complicated fracking simulations in poroelastic media. Computer Methods in Applied Mechanics and Engineering. 399, p. 115451. https://doi.org/10.1016/j.cma.2022.115451

A Lattice Boltzmann model for 2D fractional advection-dispersion equation: Theory and application

A - Papers appearing in refereed journals
Wang, F., Zhang, X., Shen, X. and Sun, J, 2018. A Lattice Boltzmann model for 2D fractional advection-dispersion equation: Theory and application . Journal of Hydrology. 564 (564), pp. 246-255. https://doi.org/10.1016/j.jhydrol.2018.06.083

A Lattice Boltzmann model for simulating water flow at pore scale in unsaturated soils

A - Papers appearing in refereed journals
Zhang, X., Crawford, J. W. and Young, I. M. 2016. A Lattice Boltzmann model for simulating water flow at pore scale in unsaturated soils. Journal of Hydrology. 538, pp. 152-160. https://doi.org/10.1016/j.jhydrol.2016.04.013

A long-term study of the effects of heavy metals in sewage sludge on soil fertility and soil microbial activity

C1 - Edited contributions to conferences/learned societies
Bacon, J. R., Campbell, C. D., Coull, M. C., Chambers, B. J., Gibbs, P. A., Chaudri, A., McGrath, S. P., Carlton-Smith, C. H. and Aitken, M. 2001. A long-term study of the effects of heavy metals in sewage sludge on soil fertility and soil microbial activity. Dhir, R. K., McCarthy, M. J. and Limbachiya, M. C. (ed.) Recycling and reuse of sewage sludge . Thomas Telford, London. pp. 87-96

A loss function to evaluate agricultural decision‑making under uncertainty: a case study of soil spectroscopy

A - Papers appearing in refereed journals
Breure, T., Haefele, S. M., Hannam, J. A., Corstanje, R., Webster, R., Moreno-Rojas, S. and Milne, A. E. 2022. A loss function to evaluate agricultural decision‑making under uncertainty: a case study of soil spectroscopy. Precision Agriculture. 23, pp. 1333 - 1353. https://doi.org/10.1007/s11119-022-09887-2

A metabolomic study of substantial equivalence of field-grown genetically modified wheat

A - Papers appearing in refereed journals
Baker, J. M., Hawkins, N. D., Ward, J. L., Lovegrove, A., Napier, J. A., Shewry, P. R. and Beale, M. H. 2006. A metabolomic study of substantial equivalence of field-grown genetically modified wheat. Plant Biotechnology Journal. 4 (4), pp. 381-392. https://doi.org/10.1111/j.1467-7652.2006.00197.x

A method for release and multiple strand amplification of small quantities of DNA from endospores of the fastidious bacterium Pasteuria penetrans

A - Papers appearing in refereed journals
Mauchline, T. H., Mohan, S., Davies, K. G., Schaff, J. E., Opperman, C. H., Kerry, B. R. and Hirsch, P. R. 2010. A method for release and multiple strand amplification of small quantities of DNA from endospores of the fastidious bacterium Pasteuria penetrans. Letters in Applied Microbiology. 50 (5), pp. 515-521. https://doi.org/10.1111/j.1472-765X.2010.02830.x

A method to buffer the concentrations of free Zn and Cd ions using a cation exchange resin in bacterial toxicity studies

A - Papers appearing in refereed journals
Knight, B. and McGrath, S. P. 1995. A method to buffer the concentrations of free Zn and Cd ions using a cation exchange resin in bacterial toxicity studies. Environmental Toxicology And Chemistry. 14 (12), pp. 2033-2039. https://doi.org/10.1897/1552-8618(1995)14[2033:AMTBTC]2.0.CO;2

A model to predict the effects of soil structure on denitrification and N2O emission

A - Papers appearing in refereed journals
Laudone, G. M., Matthews, G. P., Bird, N. R. A., Whalley, W. R., Cardenas, L. M. and Gregory, A. S. 2011. A model to predict the effects of soil structure on denitrification and N2O emission. Journal of Hydrology. 409, pp. 283-290. https://doi.org/10.1016/j.jhydrol.2011.08.026

A multi-technique investigation of copper and zinc distribution, speciation and potential bioavailability in biosolids

A - Papers appearing in refereed journals
Donner, E., Ryan, C. G., Howard, D. L., Zarcinas, B., Scheckel, K. G., McGrath, S. P., De Jonge, M. D., Paterson, D., Naidu, R. and Lombi, E. 2012. A multi-technique investigation of copper and zinc distribution, speciation and potential bioavailability in biosolids. Environmental Pollution. 166, pp. 57-64. https://doi.org/10.1016/j.envpol.2012.02.012

A Neural Network Method for Classification of Sunlit and Shaded Components of Wheat Canopies in the Field Using High-Resolution Hyperspectral Imagery

A - Papers appearing in refereed journals
Sadeghi-Tehran, P., Virlet, N. and Hawkesford, M. J. 2021. A Neural Network Method for Classification of Sunlit and Shaded Components of Wheat Canopies in the Field Using High-Resolution Hyperspectral Imagery. Remote Sensing. 13 (5), p. 898. https://doi.org/10.3390/rs13050898

A new approach to assessing phosphorus use efficiency in agriculture

G - Articles in popular magazines and other technical publications
Johnston, A. E. and Syers, J. K. 2009. A new approach to assessing phosphorus use efficiency in agriculture. Better Crops with Plant Food. 93(3), pp. 14-16.

A new class of cytochrome b(5) fusion proteins

A - Papers appearing in refereed journals
Napier, J. A., Sayanova, O. V., Stobart, A. K. and Shewry, P. R. 1997. A new class of cytochrome b(5) fusion proteins. Biochemical Journal. 328 (2), pp. 717-720. https://doi.org/10.1042/bj3280717u

A new initiative in crop protection research on rape.

G - Articles in popular magazines and other technical publications
Rawlinson, C. J., Pickett, J. A., Shewry, P. R., Wilding, N. and Williams, I. H. 1989. A new initiative in crop protection research on rape. GCIRC Bulletin. 5, pp. 58-59.

A new measure of effective soil solution concentration predicts metal availability to plants

C2 - Non-edited contributions to conferences
Zhang, H., Zhao, F-J., Sun, B., Davison, W., Hooda, P. and McGrath, S. P. 2001. A new measure of effective soil solution concentration predicts metal availability to plants. Abstracts Workshop on Chemical Bioavailability in the Terrestrial Environment, Adelaide, 18-20 November 2001 . pp. 19-20

A new method for the determination of the 34S/32S ratio of water-soluble sulphur in soil

A - Papers appearing in refereed journals
Fox, M. A., Zhao, F-J. and McGrath, S. P. 2004. A new method for the determination of the 34S/32S ratio of water-soluble sulphur in soil. International Journal Of Environmental Analytical Chemistry. 84, pp. 323-329. https://doi.org/10.1080/03067310410001679994

A new method to measure effective soil solution concentration predicts copper availability to plants

A - Papers appearing in refereed journals
Zhang, H., Zhao, F-J., Sun, B., Davison, W. and McGrath, S. P. 2001. A new method to measure effective soil solution concentration predicts copper availability to plants. Environmental Science & Technology. 35 (12), pp. 2602-2607. https://doi.org/10.1021/es000268q

A new RNASeq-based reference transcriptome for sugar beet and its application in transcriptome-scale analysis of vernalization and gibberellin responses

A - Papers appearing in refereed journals
Mutasa-Göttgens, E. S., Joshi, A., Holmes, H. F., Hedden, P. and Gottgens, B. 2012. A new RNASeq-based reference transcriptome for sugar beet and its application in transcriptome-scale analysis of vernalization and gibberellin responses. BMC Genomics. 13, p. 99. https://doi.org/10.1186/1471-2164-13-99

A new Rothamsted long-term field experiment for the twenty-first century - principles and practice

A - Papers appearing in refereed journals
Li, X., Storkey, J., Mead, A., Shield, I. F., Clark, I. M., Ostler, R., Roberts, B. and Dobermann, A. 2023. A new Rothamsted long-term field experiment for the twenty-first century - principles and practice. Agronomy for Sustainable Development - ASD. 43 (5), p. 60. https://doi.org/10.1007/s13593-023-00914-8

A novel approach to estimate soil penetrometer resistance from water content, bulk density, and shear wave velocity: A laboratory study on a loamy sand soil

A - Papers appearing in refereed journals
Zhang, W., Gao, W., Ren, T. and Whalley, W. R. 2020. A novel approach to estimate soil penetrometer resistance from water content, bulk density, and shear wave velocity: A laboratory study on a loamy sand soil. Geoderma. 368 (1 June), p. 114276. https://doi.org/10.1016/j.geoderma.2020.114276

A novel approach to identify genes that determine grain protein deviation in cereals

A - Papers appearing in refereed journals
Mosleth, E. F., Wan, Y., Lysenko, A., Chope, G. A., Penson, S. P., Shewry, P. R. and Hawkesford, M. J. 2015. A novel approach to identify genes that determine grain protein deviation in cereals. Plant Biotechnology Journal. 13 (5), pp. 625-635. https://doi.org/10.1111/pbi.12285

A novel bioinformatics approach identifies candidate genes for the synthesis and feruloylation of arabinoxylan

A - Papers appearing in refereed journals
Mitchell, R. A. C., Dupree, P. and Shewry, P. R. 2007. A novel bioinformatics approach identifies candidate genes for the synthesis and feruloylation of arabinoxylan. Plant Physiology. 144 (May), pp. 43-53. https://doi.org/10.1104/pp.106.094995

A novel dielectric tensiometer enabling precision PID-based irrigation control of polytunnel-grown strawberries in coir

A - Papers appearing in refereed journals
Goodchild, M. S., Jenkins, M. D., Whalley, W. R. and Watts, C. W. 2018. A novel dielectric tensiometer enabling precision PID-based irrigation control of polytunnel-grown strawberries in coir. Biosystems Engineering. 165 (January), pp. 70-76. https://doi.org/10.1016/j.biosystemseng.2017.10.018

A Novel Dwarfing Mutation in a Green Revolution Gene from Brassica rapa

A - Papers appearing in refereed journals
Muangprom, A., Thomas, S. G., Sun, T-P. and Osborn, T. C. 2005. A Novel Dwarfing Mutation in a Green Revolution Gene from Brassica rapa. Plant Physiology. 137 (3), pp. 931-938. https://doi.org/10.1104/pp.104.057646

A novel family of γ-gliadin genes are highly regulated by nitrogen supply in developing wheat grain

A - Papers appearing in refereed journals
Wan, Y., Shewry, P. R. and Hawkesford, M. J. 2013. A novel family of γ-gliadin genes are highly regulated by nitrogen supply in developing wheat grain. Journal of Experimental Botany. 64 (1), pp. 161-168. https://doi.org/10.1093/jxb/ers318

A novel gibberellin promotes seedling establishment

A - Papers appearing in refereed journals
Hedden, P. 2019. A novel gibberellin promotes seedling establishment. Nature Plants. 5 (May), p. 459–460. https://doi.org/10.1038/s41477-019-0427-7

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